View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3447-Insertion-14 (Length: 491)
Name: NF3447-Insertion-14
Description: NF3447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3447-Insertion-14 |
 | |
|
| [»] chr4 (1 HSPs) |
| |
|
| [»] chr6 (1 HSPs) |
| |
|
| [»] chr5 (2 HSPs) |
| |
|
Alignment Details
Target: chr4 (Bit Score: 372; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 7 - 491
Target Start/End: Original strand, 37616878 - 37617357
Alignment:
| Q |
7 |
ataaacaattttaagaaaatgtgaatcaaaataaaataaatggtccctatttatacatgagaagtcctaaagaagagagacatggattcatgcatgcatc |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
37616878 |
ataaacaattttaagaaaatgtgaatcaaaataaaataaatggtccctatttatacatgagaagtcctaaagaagagagacatggattcatgcatgcaac |
37616977 |
T |
|
| Q |
107 |
acagattaggcaaagagtaaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacatcgaaggcagacctgaatttgaagtagcagcgga |
206 |
Q |
| |
|
||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |
|
|
| T |
37616978 |
acaaattaggcaaagagtaaaattgaatgaaaaaagcctatcgcacaaaatggctaaacagaaacattgaaggcagacct-----tgaagtagcagcgga |
37617072 |
T |
|
| Q |
207 |
ggnnnnnnncttacatgaacaaaacacataatgcagcataacagacactgacaaccacgaagaaaaagcttcctcatgtccgaacatataaacttaattc |
306 |
Q |
| |
|
|| ||||||| ||||||||||||||||||| |||||| || |||||| |||||||||||||||| |||||||||||||||||||| ||||| || |
|
|
| T |
37617073 |
ggaaaaaaacttacataaacaaaacacataatgcagtataacacacgctgacagccacgaagaaaaagctccctcatgtccgaacatataagcttaagtc |
37617172 |
T |
|
| Q |
307 |
ttggacatataaacttaagtcttcttaattcaaatacgatctaaaaacacatcaactaccaacactatatagcaatttgaaaatgagatagataacacca |
406 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
37617173 |
ttggacatataagcttaagtcttcttaattcaaatacgatctaaaaacacatcaactaccaacactatatagcaatttgaaaatgagatacataacacca |
37617272 |
T |
|
| Q |
407 |
tctgtcaagacacattctcaacataaaatatcatgctaaataactttttgagttataggttgctttaagttccaaatgtgtcgta |
491 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
37617273 |
tctatcaagacacattctcaacataaaatatcatgctaaatagctttttgagttataggctgctttaagatccaaatgtgtcgta |
37617357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 365; Significance: 0; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 7 - 468
Target Start/End: Complemental strand, 19768409 - 19767949
Alignment:
| Q |
7 |
ataaacaattttaagaaaatgtgaatcaaaataaaataaatggtccctatttatacatgagaagtcctaaagaagagagacatggattcatgcatgcatc |
106 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
19768409 |
ataaacaattttaagaaaatgtgaatcaaaataaaataaatggtccctatttatacatgagaagtcctaaagaagagagacatggattcatgcatgcaac |
19768310 |
T |
|
| Q |
107 |
acagattaggcaaagagtaaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacatcgaaggcagacctgaatttgaagtagcagcgga |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |
|
|
| T |
19768309 |
acagattaggcaaagagtaaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacattgaaggcagacctgaatttgaagtagcagcaga |
19768210 |
T |
|
| Q |
207 |
ggnnnnnnncttacatgaacaaaacacataatgcagcataacagacactgacaaccacgaagaaaaagcttcctcatgtccgaacatataaacttaattc |
306 |
Q |
| |
|
|| ||||||| ||||||||||||||||||| |||||| ||||||||| |||||||||||||||| |||||||||||||||||||| ||||| || |
|
|
| T |
19768209 |
ggaaaaaaacttacataaacaaaacacataatgcagtataacacacactgacagccacgaagaaaaagctccctcatgtccgaacatataagcttaagtc |
19768110 |
T |
|
| Q |
307 |
ttggacatataaacttaagtcttcttaattcaaatacgatctaaaaacacatcaactaccaacactatatagcaatttgaaaatgagatagataacacca |
406 |
Q |
| |
|
|||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
19768109 |
ttggacatataagcttaagtgttcttaattcaaatacgatctaaaaacacatcaactaccaacactatatagcaatttgaaaatgagatacataacacca |
19768010 |
T |
|
| Q |
407 |
tctgtcaagacacattctcaacataaaatatcatgctaaataactttttgagttataggttg |
468 |
Q |
| |
|
||| ||||||||||||| |||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
19768009 |
tctaccaagacacattctgaacataaaatatcatgctaaat-agtttttgagttataggttg |
19767949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 7 - 282
Target Start/End: Complemental strand, 29199923 - 29199652
Alignment:
| Q |
7 |
ataaacaattttaagaaaatgtgaatcaaaataaaataaatggtccctatttatacatgagaagtcctaaagaagagagacatggattcatgcatgcatc |
106 |
Q |
| |
|
|||||||||||||||| | |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||| | |
|
|
| T |
29199923 |
ataaacaattttaagacagtgtgaatcaaaataaagtaaatggtcc-tatttatacatgagaagtcctaaagaagagagtcatggattcaagcatgcaac |
29199825 |
T |
|
| Q |
107 |
acagattaggcaaagagtaaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacatcgaaggcagacctgaatttgaagtagcagcgga |
206 |
Q |
| |
|
| ||||| ||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||| |||| |||||||||||||||||| || |
|
|
| T |
29199824 |
aacgattacgcaaagagtaaaattaaatgaacaaagcatatcctacaaaatggctaaacagaaacatcgaaagcaggcctgaatttgaagtagca---ga |
29199728 |
T |
|
| Q |
207 |
ggnnnnnnncttacatgaacaaaacacataatgcagcataacagacactgacaaccacgaagaaaaagcttcctca |
282 |
Q |
| |
|
|| ||||||| |||||||||||||||||||||||||| |||| |||| |||||||||||||||| ||||| |
|
|
| T |
29199727 |
ggaaaaaaacttacataaacaaaacacataatgcagcataacacacaccgacagccacgaagaaaaagctccctca |
29199652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 311 - 488
Target Start/End: Original strand, 45456360 - 45456537
Alignment:
| Q |
311 |
acatataaacttaagtcttcttaattcaaatacgatctaaaaacacatcaactaccaacactatatagcaatttgaaaatgagatagataacaccatctg |
410 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
45456360 |
acatataaacttaagtattcttaattcaaatacgatctaaaaacacattaactaccaacactatatagcaatttgaaaatgagatacataacaccatctg |
45456459 |
T |
|
| Q |
411 |
tcaagacacattctcaacataaaatatcatgctaaataactttttgagttataggttgctttaagttccaaatgtgtc |
488 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||| |
|
|
| T |
45456460 |
caaagatacattctcaacataaaatatcatgctaaataaccttttgggttataggttgctttaagatccaaatgtgtc |
45456537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 258
Target Start/End: Original strand, 12572307 - 12572455
Alignment:
| Q |
110 |
gattaggcaaagagtaaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacatcgaaggcagacctgaatttgaagtagcagcggaggn |
209 |
Q |
| |
|
|||| |||||||| ||||||||||| ||||||| ||| |||||||||||||| ||||| || |||||||||||||||||||||||||||||| ||| |
|
|
| T |
12572307 |
gattgggcaaagattaaaattgaatcaacaaagtatatgatacaaaatggctaaaaagaaaaattgaaggcagacctgaatttgaagtagcagcgcaggc |
12572406 |
T |
|
| Q |
210 |
nnnnnncttacatgaacaaaacacataatgcagcataacagacactgac |
258 |
Q |
| |
|
||||||| ||||||||||| ||||| || ||||| |||||||| |
|
|
| T |
12572407 |
aaaaaacttacataaacaaaacacacaatgccgcgtaacacacactgac |
12572455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 258
Target Start/End: Original strand, 13548771 - 13548919
Alignment:
| Q |
110 |
gattaggcaaagagtaaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacatcgaaggcagacctgaatttgaagtagcagcggaggn |
209 |
Q |
| |
|
|||| |||||||| ||||||||||| ||||||| ||| |||||||||||||| ||||| || |||||||||||||||||||||||||||||| ||| |
|
|
| T |
13548771 |
gattgggcaaagattaaaattgaatcaacaaagtatatgatacaaaatggctaaaaagaaaaattgaaggcagacctgaatttgaagtagcagcgcaggc |
13548870 |
T |
|
| Q |
210 |
nnnnnncttacatgaacaaaacacataatgcagcataacagacactgac |
258 |
Q |
| |
|
||||||| ||||||||||| ||||| || ||||| |||||||| |
|
|
| T |
13548871 |
aaaaaacttacataaacaaaacacacaatgccgcgtaacacacactgac |
13548919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 349; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 7 - 491
Target Start/End: Complemental strand, 22083096 - 22082618
Alignment:
| Q |
7 |
ataaacaattttaagaaaatgtgaatcaaaataaaataaatggtccctatttatacatgagaagtcctaaagaagagagacatggattcatgcatgcatc |
106 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
22083096 |
ataaacaattttaagaaaatatgaat------aaaatatatggtccctatttatacatgagaagtcctaaagaagagagacatggattcatgcatgcaac |
22083003 |
T |
|
| Q |
107 |
acagattaggcaaagagtaaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacatcgaaggcagacctgaatttgaagtagcagcgga |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
22083002 |
acagattaggcaaagagtaaaattgaatgaacaaagcctatcgcacaaaatggcaaaacagaaacattgaaggcatacctgaatttgaagtagcagcgga |
22082903 |
T |
|
| Q |
207 |
ggnnnnnnncttacatgaacaaaacacataatgcagcataacagacactgacaaccacgaagaaaaagcttcctcatgtccgaacatataaacttaattc |
306 |
Q |
| |
|
| ||||||| ||||||||||||||||||| |||||| ||||||||| |||||||||||||||| |||||||||||||||||||| ||||| || |
|
|
| T |
22082902 |
gaaaaaaaacttacataaacaaaacacataatgcagtataacacacactgacagccacgaagaaaaagctccctcatgtccgaacatataagcttaagtc |
22082803 |
T |
|
| Q |
307 |
ttggacatataaacttaagtcttcttaattcaaatacgatctaaaaacacatcaactaccaacactatatagcaatttgaaaatgagatagataacacca |
406 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
22082802 |
ttggacatataagcttaagtcttcttaattcaactacgatctaaaaacacatcgactaccaacactatatagcaatttgaaaatgagatacataacacca |
22082703 |
T |
|
| Q |
407 |
tctgtcaagacacattctcaacataaaatatcatgctaaataactttttgagttataggttgctttaagttccaaatgtgtcgta |
491 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
22082702 |
tctaccaagacacattctcaacataaaatatcatgctaaatagctttttgagttataggttgttttaagatccaaatgtgtcgta |
22082618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 157; Significance: 3e-83; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 311 - 491
Target Start/End: Complemental strand, 40164908 - 40164728
Alignment:
| Q |
311 |
acatataaacttaagtcttcttaattcaaatacgatctaaaaacacatcaactaccaacactatatagcaatttgaaaatgagatagataacaccatctg |
410 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
40164908 |
acatataaacttaagtcttcttaattcaaatacgatctaaaaacacatcaactaccaacgctatatagcaatttgaaaatgagatacataacaccatctt |
40164809 |
T |
|
| Q |
411 |
tcaagacacattctcaacataaaatatcatgctaaataactttttgagttataggttgctttaagttccaaatgtgtcgta |
491 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
40164808 |
ccaagacacattatcaacataaaatatcatgctaaataactttttgagttataggttgctttaagatccaaatgtgtcgta |
40164728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 110 - 273
Target Start/End: Complemental strand, 4351793 - 4351630
Alignment:
| Q |
110 |
gattaggcaaagagtaaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacatcgaaggcagacctgaatttgaagtagcagcggaggn |
209 |
Q |
| |
|
|||| |||||||| ||||||||||| ||||||| ||| |||||||||||||| ||||| ||||||||||||||| ||||||||||||||||| ||| |
|
|
| T |
4351793 |
gattgggcaaagattaaaattgaatcaacaaagtatatgatacaaaatggctaaaaagaaaaatcgaaggcagacctaaatttgaagtagcagcgcagga |
4351694 |
T |
|
| Q |
210 |
nnnnnncttacatgaacaaaacacataatgcagcataacagacactgacaaccacgaagaaaaa |
273 |
Q |
| |
|
||||||| ||||||||| | ||||| || ||||| |||||||| ||||||| ||||| |
|
|
| T |
4351693 |
acaaaacttacataaacaaaacaaacaatgccgcgtaacacacactgactgccacgaaaaaaaa |
4351630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 139; Significance: 2e-72; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 311 - 488
Target Start/End: Complemental strand, 6921749 - 6921571
Alignment:
| Q |
311 |
acatataaacttaagtcttcttaattcaaatacgatctaaaaacacatcaactaccaacactatatagcaatttgaaaatgagatagataacaccatctg |
410 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
6921749 |
acatataaacttaagtattcttaattcaaatacgatctaaaaacacattaactaccaacactatatagcaatttgaaaatgagatacataacaccatctg |
6921650 |
T |
|
| Q |
411 |
tcaagacacattctcaacataaaatatcatgctaaat-aactttttgagttataggttgctttaagttccaaatgtgtc |
488 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||| |||||||||||| |
|
|
| T |
6921649 |
caaagacacattctcaacataaaatatcatgctaaataaaccttttgggttataggttgctttaagatccaaatgtgtc |
6921571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 311 - 488
Target Start/End: Original strand, 38238129 - 38238307
Alignment:
| Q |
311 |
acatataaacttaagtcttcttaattcaaatacgatctaaaaacacatcaactaccaacactatatagcaatttgaaaatgagatagataacaccatctg |
410 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
38238129 |
acatataaacttaagtattcttaattcaaatacgatctaaaaacacattaactaccaacactatatagcaatttgaaaatgagatacataacaccatctg |
38238228 |
T |
|
| Q |
411 |
tcaagacacattctcaacataaaatatcatgctaaat-aactttttgagttataggttgctttaagttccaaatgtgtc |
488 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||| |||||||||||| |
|
|
| T |
38238229 |
caaagacacattctcaacataaaatatcatgctaaataaaccttttgggttataggttgctttaagatccaaatgtgtc |
38238307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 13 - 204
Target Start/End: Original strand, 51389550 - 51389734
Alignment:
| Q |
13 |
aattttaagaaaatgtgaatcaaaataaaataaatggtccctatttatacatgagaagtcctaaagaagagagacatggattcatgcatgcatcacagat |
112 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||| || || |
|
|
| T |
51389550 |
aattttaagatgatgtgaatcaaaataaaacaaatggtccctatttatacatgagaagtcctaaagaagagggtcatggattcaagcatgcaacaatgaa |
51389649 |
T |
|
| Q |
113 |
taggcaaagagtaaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacatcgaaggcagacctgaatttgaagtagcagcg |
204 |
Q |
| |
|
||||| ||||||||| |||||||| ||||||||||||| ||||||||||||||| | ||||||||| |||| |||||||||||||| |
|
|
| T |
51389650 |
taggc-------aaaattgaacgaacaaagtctatcgcacaaaacggctaaacagaaacaccaaaggcagacttgaaattgaagtagcagcg |
51389734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 121; Significance: 9e-62; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 311 - 487
Target Start/End: Original strand, 7827613 - 7827789
Alignment:
| Q |
311 |
acatataaacttaagtcttcttaattcaaatacgatctaaaaacacatcaactaccaacactatatagcaatttgaaaatgagatagataacaccatctg |
410 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||| |
|
|
| T |
7827613 |
acatataaacttaagtcttcttaattcaaatacaatctaaaaacatatcaactaccaacactatatagcaatttgaaaatgagatacataacaacatctg |
7827712 |
T |
|
| Q |
411 |
tcaagacacattctcaacataaaatatcatgctaaataactttttgagttataggttgctttaagttccaaatgtgt |
487 |
Q |
| |
|
||||||||||||||| ||||||| || ||||||||||||||||||||||| ||||| ||||| | ||||||||| |
|
|
| T |
7827713 |
ccaagacacattctcagcataaaagataatgctaaataactttttgagttacttgttgcattaagattcaaatgtgt |
7827789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 32663143 - 32662957
Alignment:
| Q |
13 |
aattttaagaaaatgtgaatcaaaataaaataaatggtccctatttatacatgagaagtcctaaagaagagagacatggattcatgcatgcatcacagat |
112 |
Q |
| |
|
|||||||||| ||||||||||| ||||||| ||| |||||||||||||||||||||||||||||| ||||| | ||| ||||| ||||||| || ||| |
|
|
| T |
32663143 |
aattttaagataatgtgaatcataataaaacaaacggtccctatttatacatgagaagtcctaaacaagagggtaatgaattcacgcatgcaacaatgat |
32663044 |
T |
|
| Q |
113 |
taggcaaagagtaaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaacatcgaaggcagacctgaatttgaagtag |
199 |
Q |
| |
|
| || ||||||||||| |||||||||||| |||||| |||||| ||||||||| |||| | |||||| || |||| |||||||| |
|
|
| T |
32663043 |
tgggaaaagagtaaaactgaatgaacaaactctatcgtacaaaacggctaaacattaacaccaaaggcaaacttgaaactgaagtag |
32662957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 72 - 203
Target Start/End: Complemental strand, 770466 - 770338
Alignment:
| Q |
72 |
cctaaagaagagagacatggattcatgcatgcatcacagattaggcaaagagtaaaattgaatgaacaaagcctatcgcacaaaatggctaaacagaaac |
171 |
Q |
| |
|
|||||||||||| | |||||||||| |||||| || ||||||||||| ||||||||||||| |||||| |||||| ||| |||||||||||||| |
|
|
| T |
770466 |
cctaaagaagagggtcatggattcaaacatgcaacaacgattaggcaaatagtaaaattgaatagacaaagtctatcg---taaacggctaaacagaaac |
770370 |
T |
|
| Q |
172 |
atcgaaggcagacctgaatttgaagtagcagc |
203 |
Q |
| |
|
| | |||||||| |||| ||||||||||||| |
|
|
| T |
770369 |
accaaaggcagaattgaaattgaagtagcagc |
770338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 770505 - 770463
Alignment:
| Q |
13 |
aattttaagaaaatgtgaatcaaaataaaataaatggtcccta |
55 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||||||||||| |
|
|
| T |
770505 |
aattttaagatgatgtgaatcaaaataaaacaaatggtcccta |
770463 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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