View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3447-Insertion-19 (Length: 413)
Name: NF3447-Insertion-19
Description: NF3447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3447-Insertion-19 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 383; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 383; E-Value: 0
Query Start/End: Original strand, 7 - 413
Target Start/End: Complemental strand, 6352336 - 6351931
Alignment:
| Q |
7 |
atggcttgtatacttctcacatctcaatgttatcaaaggatcttcctgccatgtgactaagctctcagtgcattcatctccttatactttaggcgttacg |
106 |
Q |
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| T |
6352336 |
atggcttgtatacttctcacatctcaatgttatcaaaggatcttcctgccatgtgactaagctctcactgcattcatctccttatactttaggcgttacg |
6352237 |
T |
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| Q |
107 |
tcaaataataattctgtcatttgtaataaaatgcaacatatgattctactttggtatcaagtaaatccatttggtatgctagctaggccatgctaatggt |
206 |
Q |
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| T |
6352236 |
tcaaataataattctgtcatttgtaataaaatgcaaactatgattctactttggtatcaagtaaatccatttggtatgctagctaggccatgctaatggt |
6352137 |
T |
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| Q |
207 |
caatttgtcaaaaatgtaatttccatctgtaatataccaattgctagtaaagaactttatggtttttgtaattcttgctgtgttggtaaatcacatcgat |
306 |
Q |
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| T |
6352136 |
caatt-gtcaaaaatgtaatttccatctgtaatataccaattgctagtaaagaactttatggtttttgtaattcttgctgtgttggtaaatcacatcgat |
6352038 |
T |
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| Q |
307 |
tacatactccactttccattactattcattctaaattatttgaagtaattcacacaaaattacggagccctactcctgagccatcacattttagctacac |
406 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
6352037 |
tacatactccactttccattactattcattctaaattatttgaagtaattcacacaaaattacggagccctactcctgagccatcacattttagttacac |
6351938 |
T |
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| Q |
407 |
ctttgta |
413 |
Q |
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| T |
6351937 |
ctttgta |
6351931 |
T |
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