View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3447_low_1 (Length: 968)
Name: NF3447_low_1
Description: NF3447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3447_low_1 |
 | |
|
Alignment Details
Target: chr1 (Bit Score: 688; Significance: 0; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 688; E-Value: 0
Query Start/End: Original strand, 1 - 781
Target Start/End: Complemental strand, 38710343 - 38709562
Alignment:
| Q |
1 |
ctcttctgtgatccttcattctttgctcatacaccatcaatctacaatttgaagctcatcaattgaaagagtggttacatcatttgaatcttctatagaa |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38710343 |
ctcttctgtgatccttcattctttgctcatacaccatcaatctacaatttgaagctcatcaattgaaagagtggttacatcatttgaatcttctatagaa |
38710244 |
T |
|
| Q |
101 |
tatacaatgttcaagtattacaccaaaaagagag-gnnnnnnnnnncaccaaaaaccaccagcaccctcaaaatgtcaaatcccctaacaacagttcctc |
199 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
38710243 |
tatacaatgttcaagtattacaccaaaaagagaaagaaaaaaaaaacaccaaaaaccaccagcaccctcaaaatgccaaatcccctaataacagttcctc |
38710144 |
T |
|
| Q |
200 |
aaagaaccaacaccgccaacagtgatcaatttggcacccaatggtgattttgcttcaagcgttcagcttcgaccaccactcaagttctggtctatcggag |
299 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
38710143 |
aaagaaccaacaccgccaacagtgatcaatttggcacccaatggtgattttgcttcaagcgttcagcttcgaccaccactcaagttccggtctatcggag |
38710044 |
T |
|
| Q |
300 |
gagacatcacaacatcctaaaaggacctgagtcacaaacttgctcccgacctcgaatcaaaagcgatcatcccaaagactcccgaaacaaggcaaaaagg |
399 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
38710043 |
gagacatcacaacatcctaaaaggacctgagtcacaaacttgctcccgacctcgaatcaaaagcgatcagcccaaagactcccgaaacaaggcaaaaagg |
38709944 |
T |
|
| Q |
400 |
cacctatcaactcacgaaccatcagaacaaacaccttaacctgtccaaaaactcgacccaccaataacccgatgccaaaattcaaagacagagaaaaggc |
499 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38709943 |
cacccctcaactcacgaaccaccagaacaaacaccttaacctgtccaaaaactcgacccaccaataacccgatgccaaaattcaaagacagagaaaaggc |
38709844 |
T |
|
| Q |
500 |
ggaacagtagcgcaaagcaaaccagctcaaacacaaacaaatcaaaacaagccaccatatcaacctgcgtcaccaccacctgaatagaccaacacacacc |
599 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
38709843 |
ggaacagtagcgcaaagcaaaccagctcaaacacaaacaaatcaaaacaagccaccatatcaacctgcgtcaccaccacctgaatagaccagcacacacc |
38709744 |
T |
|
| Q |
600 |
ccaaccctcggctaggcaagtacaaaccaccacgatccttacaacgacgaatgatccgggagttgcgaagaaggaggtttaatcgtgaaggacctgcata |
699 |
Q |
| |
|
||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
38709743 |
ccagccctcggctaggcaactacaaaccaccacgatccttacaacgacgaatgatccgggagttgcgaagaaggaggtttaatcgtgaaggacctgcaga |
38709644 |
T |
|
| Q |
700 |
cctcgctctttcgagcaataacaaccaagcaaccaaaacctaaagcaagagcaggaggcctccagcggcatggctccgaagg |
781 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38709643 |
cctcgctctttcgagcaacaacaaccaagcaaccaaaacctaaaccaagagcaggaggcctccagcggcatggctccgaagg |
38709562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 150 - 697
Target Start/End: Complemental strand, 4391849 - 4391302
Alignment:
| Q |
150 |
aaaaaccaccagcaccctcaaaatgtcaaatcccctaacaacagttcctcaaagaaccaacaccgccaacagtgatcaatttggcacccaatggtgattt |
249 |
Q |
| |
|
|||||| |||||| ||||||||||||| ||||||||||||| || ||||||||||||||||||| ||||||||| ||| |||| || ||||| |
|
|
| T |
4391849 |
aaaaacaaccagccccctcaaaatgtcgaatcccctaacaaaagctcctcaaagaaccaacaccaccaacagtggaaaatcaagcacatgataaagattt |
4391750 |
T |
|
| Q |
250 |
tgcttcaagc-gttcagcttcgaccaccactcaagttctggtctatcggaggagacatcacaacatcctaaaaggacctgagtcacaaa-cttgctcccg |
347 |
Q |
| |
|
||||||||| | ||| ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||| |
|
|
| T |
4391749 |
tgcttcaagatgctcaacttcgaccaccactcaagttcctgtctatcggaggagacatcacaacagcctaaaag-acctgagtcacaaaacttgctcccg |
4391651 |
T |
|
| Q |
348 |
acctcgaatcaaaagcgatcatccca-aagactcccgaaacaaggcaaaaaggcacctatcaactcacgaaccatcagaacaaacaccttaacctgtcca |
446 |
Q |
| |
|
||| ||||||||||||||| |||| ||||||||||| |||||||||||| ||||| ||||||||||||||| ||||||| ||||||||||||| ||| |
|
|
| T |
4391650 |
accccgaatcaaaagcgattggcccacaagactcccgacacaaggcaaaaatgcacccctcaactcacgaaccaccagaacagacaccttaacctgacca |
4391551 |
T |
|
| Q |
447 |
aaaactcgacccaccaataacccgatgccaaaattcaaagacagagaaaaggcggaacagtagcgcaaagcaaaccagctcaaacacaaacaaatcaaaa |
546 |
Q |
| |
|
||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||| ||| |||| |||| |||||| |
|
|
| T |
4391550 |
aaacctcgacccaccaagaacccgatgccaaaatccaaagacagagaaaaggcggaatagtagcacaaagcaaaccatctcgaacataaac---tcaaaa |
4391454 |
T |
|
| Q |
547 |
caagccaccatatcaacctgcgtcaccaccacctgaatagaccaacacacaccccaaccctcggctaggcaagtac-aaaccaccacgatccttacaacg |
645 |
Q |
| |
|
||||| ||| |||| ||| | ||||||||||||||||||||| | ||| ||||||||||| ||||| ||| || ||||||||||||||||||| ||| |
|
|
| T |
4391453 |
caagcacccaaatcatcctacatcaccaccacctgaatagaccggcgcacgccccaaccctcagctagacaaccacaaaaccaccacgatccttacgacg |
4391354 |
T |
|
| Q |
646 |
acgaatgatccgggagttgcgaagaaggaggtttaatcgtgaaggacctgca |
697 |
Q |
| |
|
||||| ||||| ||||||||||||||||||| |||||||||||||| ||||| |
|
|
| T |
4391353 |
acgaacgatccaggagttgcgaagaaggaggattaatcgtgaaggatctgca |
4391302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 150 - 367
Target Start/End: Original strand, 4397313 - 4397527
Alignment:
| Q |
150 |
aaaaaccaccagcaccctcaaaatgtcaaatcccctaacaacagttcctcaaagaaccaacaccgccaacagtgatcaatttggcacccaatggtgattt |
249 |
Q |
| |
|
||||||||||||||||||||||||| | |||||| ||||||| |||||||||||||||||||||||||| ||||||||| ||||||| || ||||||| |
|
|
| T |
4397313 |
aaaaaccaccagcaccctcaaaatgccgaatcccataacaac---tcctcaaagaaccaacaccgccaacaatgatcaattaggcacccgatagtgattt |
4397409 |
T |
|
| Q |
250 |
tgcttcaagcgttcagcttcgaccaccactcaagttctggtctatcggaggagacatcacaacatcctaaaaggacctgagtcacaaacttgctcccgac |
349 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |
|
|
| T |
4397410 |
tgcttcaaacgttcagcttcgaccaccactcaagatccggtctatcggaggagacatcacaacagcctaaaaggacctgagtcacaaacttactcccgaa |
4397509 |
T |
|
| Q |
350 |
ctcgaatcaaaagcgatc |
367 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
4397510 |
ctcgaatcaaaagcgatc |
4397527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 374 - 504
Target Start/End: Original strand, 39908886 - 39909016
Alignment:
| Q |
374 |
aagactcccgaaacaaggcaaaaaggcacctatcaactcacgaaccatcagaacaaacaccttaacctgtccaaaaactcgacccaccaataacccgatg |
473 |
Q |
| |
|
||||||| ||| ||||| |||||| ||||| ||||||||||||||| |||| || |||||| ||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
39908886 |
aagactcacgacacaagtcaaaaaagcacccctcaactcacgaaccaccagagcatacacctaaacctgtccaaaaactcgatccaccaataacccgatg |
39908985 |
T |
|
| Q |
474 |
ccaaaattcaaagacagagaaaaggcggaac |
504 |
Q |
| |
|
||||||| ||||||||||||||||| ||||| |
|
|
| T |
39908986 |
ccaaaatccaaagacagagaaaaggtggaac |
39909016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 831 - 892
Target Start/End: Complemental strand, 38709512 - 38709451
Alignment:
| Q |
831 |
cgactctgagaagaaagtgaaccaccaaaaggttgagggagatctataaaacctcgacctag |
892 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38709512 |
cgactctgagaagaaagtgaaccaccaaaaggttgagggagatctataaaacctcgacctag |
38709451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 341 - 554
Target Start/End: Complemental strand, 38564951 - 38564742
Alignment:
| Q |
341 |
gctcccgacctcgaatcaaaagcgatcatcccaa-agactcccgaaacaaggcaaaaaggcacctatcaactcacgaaccatcagaacaaacaccttaac |
439 |
Q |
| |
|
|||||||| |||||||||||||||||| |||| ||||||| | |||| ||||| |||||| ||||||||||| ||||| || ||||||||| ||| |
|
|
| T |
38564951 |
gctcccgatctcgaatcaaaagcgatcggcccacgagactcctaacacaaatcaaaa-ggcacccctcaactcacgacccatctgagcaaacacctaaac |
38564853 |
T |
|
| Q |
440 |
ctgtccaaaaactcgacccaccaataacccgatgccaaaattcaaagacagagaaaaggcggaacagtagcgcaaagcaaaccagctcaaacacaaacaa |
539 |
Q |
| |
|
|||||| ||||||| |||||||| | || |||||| |||||| ||||| ||||| ||| |||| || ||| |||| | ||||||||| ||| ||||| |
|
|
| T |
38564852 |
ctgtcc--aaactcg-cccaccaaaatcctgatgcc-aaattcgaagacggagaacaggtggaatagcagcacaaaacgaaccagctcgaacctaaacat |
38564757 |
T |
|
| Q |
540 |
atcaaaacaagccac |
554 |
Q |
| |
|
|| |||||||||||| |
|
|
| T |
38564756 |
atgaaaacaagccac |
38564742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 335 - 478
Target Start/End: Complemental strand, 13987677 - 13987533
Alignment:
| Q |
335 |
aaacttgctcccgacctcgaatcaaaagcgatcatcccaa-agactcccgaaacaaggcaaaaaggcacctatcaactcacgaaccatcagaacaaacac |
433 |
Q |
| |
|
||||| |||||||| |||||| |||||||||| |||| ||| |||||| |||| || |||||||| ||||||||||||||| |||| || |||| |
|
|
| T |
13987677 |
aaactagctcccgatctcgaagcaaaagcgattggcccaccagattcccgacacaaatcatcaaggcacccctcaactcacgaaccaccagagcagacac |
13987578 |
T |
|
| Q |
434 |
cttaacctgtccaaaaactcgacccaccaataacccgatgccaaa |
478 |
Q |
| |
|
| ||||| || ||||||||| | |||||| |||| ||||||||| |
|
|
| T |
13987577 |
caaaacctatctaaaaactcggctcaccaaaaacctgatgccaaa |
13987533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 309; Significance: 1e-173; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 309; E-Value: 1e-173
Query Start/End: Original strand, 150 - 697
Target Start/End: Complemental strand, 16285306 - 16284760
Alignment:
| Q |
150 |
aaaaaccaccagcaccctcaaaatgtcaaatcccctaacaacagttcctcaaagaaccaacaccgccaacagtgatcaatttggcacccaatggtgattt |
249 |
Q |
| |
|
||||||||||| ||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||| || ||||||| |
|
|
| T |
16285306 |
aaaaaccaccatcaccctcaaaatgccaaa-cccctaacaacagttccttaaagaaccaacaccgccaacagtgattaattaggcacccgatagtgattt |
16285208 |
T |
|
| Q |
250 |
tgcttcaagcgttcagcttcgaccaccactcaagttctggtctatcggaggagacatcacaacatcctaaaaggacctgagtcacaaacttgctcccgac |
349 |
Q |
| |
|
|||||||| ||||||||| ||||||||||||||||| ||| ||||||||||| | |||||||| |||||||||||||||||| |||||||||||||||| |
|
|
| T |
16285207 |
tgcttcaaatgttcagctttgaccaccactcaagttccggtttatcggaggagccgtcacaacagcctaaaaggacctgagtcgcaaacttgctcccgac |
16285108 |
T |
|
| Q |
350 |
ctcgaatcaaaagcgatcatccca-aagactcccgaaacaaggcaaaaaggcacctatcaactcacgaaccatcagaacaaacaccttaacctgtccaaa |
448 |
Q |
| |
|
|||||||||||||||||| |||| |||||||| || || || |||||||||||| ||||||||||||||| ||| || ||||||||||||||||||| |
|
|
| T |
16285107 |
ctcgaatcaaaagcgatcggcccacaagactccagacactagtcaaaaaggcacccctcaactcacgaaccacaagagcagacaccttaacctgtccaaa |
16285008 |
T |
|
| Q |
449 |
aactcgacccaccaataacccgatgccaaaattcaaagacagagaaaaggcggaacagtagcgcaaagcaaaccagctcaaacacaaacaaatcaaaaca |
548 |
Q |
| |
|
||||||||||||||||| | ||||||||||| |||||||||| |||||| || |||||||| |||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
16285007 |
aactcgacccaccaatagctcgatgccaaaa-tcaaagacagcgaaaagacgaaacagtagtgcaaagtgaaccagctcgaacacaaacaaatcaaaaca |
16284909 |
T |
|
| Q |
549 |
agccaccatatcaacctgcgtcaccaccacctgaatagaccaacacacaccccaaccctcggctaggcaagtacaaaccaccacgatccttacaacgacg |
648 |
Q |
| |
|
|||||||| |||||||||| |||||||||| |||||||||| | ||||||||||||||| ||| | ||| ||||||||||||||||||||| ||| || |
|
|
| T |
16284908 |
agccaccaaatcaacctgcatcaccaccacatgaatagaccggcgcacaccccaaccctcagcttgacaaccacaaaccaccacgatccttacgacggcg |
16284809 |
T |
|
| Q |
649 |
aatgatccgggagttgcgaagaaggaggtttaatcgtgaaggacctgca |
697 |
Q |
| |
|
|| ||| |||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
16284808 |
aacgattcgggagttgcgaagaaggagaattaatcgtgaaggacctgca |
16284760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 150 - 697
Target Start/End: Original strand, 17323997 - 17324546
Alignment:
| Q |
150 |
aaaaaccaccagcaccctcaaaatgtcaaatcccctaacaacagttcctcaaagaaccaacaccgccaacagtgatcaatttggcacccaatggtgattt |
249 |
Q |
| |
|
||||||||| |||||||| |||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||| | |||| || ||||||| |
|
|
| T |
17323997 |
aaaaaccactagcaccctgaaaatgatgaatcccctgacaacaactcctcaaagaaccaacaccgccaacagtgatcaattcgacacctgatagtgattt |
17324096 |
T |
|
| Q |
250 |
tgcttcaagcgttcagcttcgaccaccactcaagttctggtctatcggaggagacatcacaacatcctaaaaggacctgagtcacaaacttgctcccgac |
349 |
Q |
| |
|
|||||||| |||||||||||||||||||||| ||||| || |||||||||||||||||||| | | ||||||||||| ||||| ||||||||||||||| |
|
|
| T |
17324097 |
tgcttcaaacgttcagcttcgaccaccactctagttccagtatatcggaggagacatcacaatagcttaaaaggacctaagtcagaaacttgctcccgac |
17324196 |
T |
|
| Q |
350 |
ctcgaatcaaaagcgatcatccca-aagactcccgaaacaaggcaaaaaggcacctatcaactcacgaaccatcagaacaaacaccttaacctgtccaaa |
448 |
Q |
| |
|
||||||||||||| |||| |||| ||||||| ||| | ||| ||||||||||| ||||||||||||||| | || | |||||| ||||| |||||| |
|
|
| T |
17324197 |
ctcgaatcaaaagagatcggcccacaagactcacgacataagtaaaaaaggcacccctcaactcacgaaccaccggagtagacacctaaacctatccaaa |
17324296 |
T |
|
| Q |
449 |
aactcgacccaccaataacccgatgccaaaattcaaagacagagaaaaggcggaacagtagcgcaaagcaaaccagctcaaacacaaacaaatcaaaaca |
548 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||| | |||||||||||| |||||| |||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
17324297 |
aactcgacccaccaataacccgatgtcaaaatccaaagacggggaaaaggcggaatagtagcacaaagcgaaccagctcgaacacaaacaaatcaaaaca |
17324396 |
T |
|
| Q |
549 |
agcc-accatatcaacctgcgtcaccaccacctgaatagaccaacacacaccccaaccctcggctaggcaagtacaaaccaccacgatccttacaacgac |
647 |
Q |
| |
|
|||| |||| |||||||||| |||||||||| |||||||||| | | ||||||||||||| ||||| ||| ||||||||||||||||||||| || || |
|
|
| T |
17324397 |
agccaaccaaatcaacctgcatcaccaccacttgaatagacctgcgctcaccccaaccctcagctagacaaccacaaaccaccacgatccttacgacaac |
17324496 |
T |
|
| Q |
648 |
gaatgatccgggagttgcgaagaaggaggtttaatcgtgaaggacctgca |
697 |
Q |
| |
|
||| ||||||||||||||||| ||||||| |||||||| |||||||||| |
|
|
| T |
17324497 |
gaacgatccgggagttgcgaaaaaggaggactaatcgtggaggacctgca |
17324546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 227; E-Value: 1e-124
Query Start/End: Original strand, 150 - 583
Target Start/End: Complemental strand, 45181835 - 45181401
Alignment:
| Q |
150 |
aaaaaccaccagcaccctcaaaatgtcaaatcccctaacaacagttcctcaaagaaccaacaccgccaacagtgatcaatttggcacccaatggtgattt |
249 |
Q |
| |
|
||||||||||| |||| |||||||| |||| |||||||||||| ||||||||||||||||||||||||| |||||||||| ||||| || ||||| | |
|
|
| T |
45181835 |
aaaaaccaccaacaccttcaaaatgccaaaatccctaacaacagctcctcaaagaaccaacaccgccaacggtgatcaattaggcacttgatagtgatat |
45181736 |
T |
|
| Q |
250 |
tgcttcaagcgttcagcttcgaccaccactcaagttctggtctatcggaggagacatcacaacatcctaaaaggacctgagtcacaaacttgctcccgac |
349 |
Q |
| |
|
|| |||| ||| |||||||||||||||| |||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
45181735 |
tgattcagatgtttagcttcgaccaccacttaagttccggtctatcgaaggagacatcacaacagcctaaaaggacctgagtcacaaacttgcttccgac |
45181636 |
T |
|
| Q |
350 |
ctcgaatcaaaagcgatcatccca-aagactcccgaaacaaggcaaaaaggcacctatcaactcacgaaccatcagaacaaacaccttaacctgtccaaa |
448 |
Q |
| |
|
||||||||||||||||| |||| ||||||||||| | ||| |||||||||||| ||||||||||||||| |||| || ||||| ||||||||||||| |
|
|
| T |
45181635 |
ctcgaatcaaaagcgattggcccacaagactcccgacaaaagtcaaaaaggcacccctcaactcacgaaccaccagagcagacaccctaacctgtccaaa |
45181536 |
T |
|
| Q |
449 |
aactcgacccaccaataacccgatgccaaaattcaaagacagagaaaaggcggaacagtagcgcaaagcaaaccagctcaaacacaaacaaatcaaaaca |
548 |
Q |
| |
|
||||||||||||||||||||| |||||||||| |||||||||| |||||| |||| ||||||||||| | ||||| ||| |||||||||||| |||| || |
|
|
| T |
45181535 |
aactcgacccaccaataacccaatgccaaaatccaaagacagaaaaaaggtggaatagtagcgcaaaacgaaccaactcgaacacaaacaaaacaaacca |
45181436 |
T |
|
| Q |
549 |
agccaccatatcaacctgcgtcaccaccacctgaa |
583 |
Q |
| |
|
|||||||| ||||| ||| ||||||||||||||| |
|
|
| T |
45181435 |
agccaccaaatcaatatgcatcaccaccacctgaa |
45181401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 150 - 311
Target Start/End: Complemental strand, 23087753 - 23087591
Alignment:
| Q |
150 |
aaaaaccaccagcaccctcaaaatgtcaaatcccc-taacaacagttcctcaaagaaccaacaccgccaacagtgatcaatttggcacccaatggtgatt |
248 |
Q |
| |
|
|||||||||||||||||| |||||| | ||||||| ||||||||| || ||||||||||| ||||||||||| ||||||||| |||| || || |||||| |
|
|
| T |
23087753 |
aaaaaccaccagcacccttaaaatgccgaatccccataacaacagctcatcaaagaaccatcaccgccaacaatgatcaattaggcatccgatagtgatt |
23087654 |
T |
|
| Q |
249 |
ttgcttcaagcgttcagcttcgaccaccactcaagttctggtctatcggaggagacatcacaa |
311 |
Q |
| |
|
|| |||||| |||||||||||||| | ||||||||||| | ||||||| |||||||||||||| |
|
|
| T |
23087653 |
ttacttcaaacgttcagcttcgactatcactcaagttccgatctatcgaaggagacatcacaa |
23087591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 150 - 361
Target Start/End: Complemental strand, 29016720 - 29016508
Alignment:
| Q |
150 |
aaaaaccaccagcaccctcaaa-atgtcaaatcccctaacaacagttcctcaaagaaccaacaccgccaacagtgatcaatttggcacccaatggtgatt |
248 |
Q |
| |
|
|||||||||||||||||||||| ||| | || |||||||||||| | ||||| ||||||||||| ||||| | |||||| |||||| || ||||| |
|
|
| T |
29016720 |
aaaaaccaccagcaccctcaaacatgccgaaacccctaacaacaactactcaaggaaccaacaccatcaacatagttcaattacgcacccgataatgatt |
29016621 |
T |
|
| Q |
249 |
ttgcttcaagcgttcagcttcgaccaccactcaagttctggtctatcggaggagacatcacaacatcctaaaaggacctgagtcacaaactt-gctcccg |
347 |
Q |
| |
|
| ||||||| | || ||||||||||||||||||| ||| |||||||||||||||||||| ||| | ||||||||||||| | ||||||| || |||| || |
|
|
| T |
29016620 |
t-gcttcaaacattgagcttcgaccaccactcaaattccggtctatcggaggagacatcccaaaaacctaaaaggaccttaatcacaaaattagctctcg |
29016522 |
T |
|
| Q |
348 |
acctcgaatcaaaa |
361 |
Q |
| |
|
||||||||| |||| |
|
|
| T |
29016521 |
acctcgaattaaaa |
29016508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 335 - 583
Target Start/End: Original strand, 2782094 - 2782343
Alignment:
| Q |
335 |
aaacttgctcccgacctcgaatcaaaagcgatcatcccaa-agactcccgaaacaaggcaaaaaggcacctatcaactcacgaaccatcagaacaaacac |
433 |
Q |
| |
|
||||| |||||||| || ||||||||| |||| ||||| |||||| ||| |||| || |||||||| ||||||||| ||||| |||| || |||| |
|
|
| T |
2782094 |
aaactggctcccgatctaaaatcaaaagtgatcgtcccaccagactctcgacacaaatcattaaggcacccctcaactcacaaaccaccagagcagacac |
2782193 |
T |
|
| Q |
434 |
cttaacctgtccaaaaactcgacccaccaataacccgatgccaaaattcaaagacagagaaaaggcggaacagtagcgcaaagcaaaccagctcaaacac |
533 |
Q |
| |
|
||||||||||||||||||||| ||||||| || | ||||||||| | ||| || |||||||| |||||| |||||||| | ||||||||| | || |
|
|
| T |
2782194 |
cttaacctgtccaaaaactcggcccaccattatctagatgccaaattcgtaagccaaagaaaaggtggaacaacagcgcaaatcgaaccagctcgagcat |
2782293 |
T |
|
| Q |
534 |
aaacaaatcaaaacaagccaccatatcaacctgcgtcaccaccacctgaa |
583 |
Q |
| |
|
||||||| |||| ||||| || | ||||| |||| |||||||||| |||| |
|
|
| T |
2782294 |
aaacaaaccaaatcaagctacaaaatcaaactgcatcaccaccacttgaa |
2782343 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 705 - 781
Target Start/End: Complemental strand, 16284678 - 16284602
Alignment:
| Q |
705 |
ctctttcgagcaataacaaccaagcaaccaaaacctaaagcaagagcaggaggcctccagcggcatggctccgaagg |
781 |
Q |
| |
|
||||||||||||| |||| |||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
16284678 |
ctctttcgagcaacaacagccaagcaatcaaaacctaatccaagagcaggaggcctccagcggcaaggctccgaagg |
16284602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 150 - 238
Target Start/End: Original strand, 35571416 - 35571504
Alignment:
| Q |
150 |
aaaaaccaccagcaccctcaaaatgtcaaatcccctaacaacagttcctcaaagaaccaacaccgccaacagtgatcaatttggcaccc |
238 |
Q |
| |
|
||||||||| || |||||||||||| | |||||||||| |||| |||||||||||| |||||||| || ||||||||| | ||||||| |
|
|
| T |
35571416 |
aaaaaccactagtaccctcaaaatgccgaatcccctaataacaactcctcaaagaactaacaccgcaaaaagtgatcaaatcggcaccc |
35571504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 622 - 689
Target Start/End: Original strand, 2787184 - 2787251
Alignment:
| Q |
622 |
caaaccaccacgatccttacaacgacgaatgatccgggagttgcgaagaaggaggtttaatcgtgaag |
689 |
Q |
| |
|
|||||||||| ||||||||| |||||||| | ||| | ||||||||||||||||| |||||||||||| |
|
|
| T |
2787184 |
caaaccaccatgatccttacgacgacgaacgttccagaagttgcgaagaaggaggattaatcgtgaag |
2787251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 624 - 686
Target Start/End: Complemental strand, 47235116 - 47235054
Alignment:
| Q |
624 |
aaccaccacgatccttacaacgacgaatgatccgggagttgcgaagaaggaggtttaatcgtg |
686 |
Q |
| |
|
||||||||||||||||||||| ||||| || ||| |||||||| |||||||| ||||||||| |
|
|
| T |
47235116 |
aaccaccacgatccttacaacaacgaacgacccgagagttgcgttgaaggaggattaatcgtg |
47235054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 303; Significance: 1e-170; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 150 - 697
Target Start/End: Original strand, 26500115 - 26500666
Alignment:
| Q |
150 |
aaaaaccaccagcaccctcaaaatgtcaaatcccctaacaacagttcctcaaagaaccaacaccgccaacagtgatcaatttggcacccaatggtgattt |
249 |
Q |
| |
|
||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||| | ||| |||||| || |||||| |
|
|
| T |
26500115 |
aaaaaccaccaagaccctcaaaatgctgaatcccctaacaacagctcctcaaagaaccaacaccaccaacagtggtgaataaagcacccgatattgattt |
26500214 |
T |
|
| Q |
250 |
tgcttcaagcgttcagcttcgaccaccactcaagttctggtctatcggaggagacatcacaacatcctaaaaggacctgagtcacaaacttgctcccgac |
349 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
26500215 |
tgcttcaaacgttcagcttcgaccaccactcaagttccggtctatcggaggagacatcacaacagcctaaaaggacttgagtcacaaacttgctcccgac |
26500314 |
T |
|
| Q |
350 |
ctcgaatcaaaagcgatcatccca-aagactcccgaaacaaggcaaaaaggcacctatcaactcacgaaccatcagaacaaacaccttaacctgtcc--a |
446 |
Q |
| |
|
|||||||||||||||||| |||| |||||| |||| ||||| |||||||||||| ||||||||||||||| ||| || |||||||||||||||| | |
|
|
| T |
26500315 |
ctcgaatcaaaagcgatcgacccacaagacttccgacacaagtcaaaaaggcacccctcaactcacgaaccactagagcatacaccttaacctgtccaaa |
26500414 |
T |
|
| Q |
447 |
aaaactcgacc--caccaataacccgatgccaaaattcaaagacagagaaaaggcggaacagtagcgcaaagcaaaccagctcaaacacaaacaaatcaa |
544 |
Q |
| |
|
||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||| || |||||| |||| ||||||||||| |
|
|
| T |
26500415 |
aaaactcgacccacaccaataacctgatgccaaaattcaaagacagagaaaaggcggaacaaaagcacaaagcgaatcagctcgaacaaaaacaaatcaa |
26500514 |
T |
|
| Q |
545 |
aacaagccaccatatcaacctgcgtcaccaccacctgaatagaccaacacacaccccaaccctcggctaggcaagtacaaaccaccacgatccttacaac |
644 |
Q |
| |
|
|||||||||||| |||||||||| |||||||||||||||||||| || || |||||||||||| ||||| ||| ||||||||||||||| | ||| || |
|
|
| T |
26500515 |
aacaagccaccaaatcaacctgcaacaccaccacctgaatagaccgacgcaaaccccaaccctcagctagacaaccacaaaccaccacgat-catacgac |
26500613 |
T |
|
| Q |
645 |
gacgaatgatccgggagttgcgaagaaggaggtttaatcgtgaaggacctgca |
697 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
26500614 |
gacgaacgatccgggagttgcgaagaaggaggattaatcgttaaggacctgca |
26500666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 235; E-Value: 1e-129
Query Start/End: Original strand, 150 - 688
Target Start/End: Complemental strand, 1799395 - 1798854
Alignment:
| Q |
150 |
aaaaaccaccagcaccctcaaaatgtca-aatcccctaacaacagttcctcaaagaaccaacaccgcc-------aacagtgatcaatttggcacccaat |
241 |
Q |
| |
|
||||||||||||||||||||||| | || ||||||||||||| |||||||||||||||||| ||| |||||||||||| ||||||| || |
|
|
| T |
1799395 |
aaaaaccaccagcaccctcaaaaaaactgaaacccctaacaacagctcctcaaagaaccaacactgccgtctgccaacagtgatcaaaaaggcacccgat |
1799296 |
T |
|
| Q |
242 |
ggtgattttgcttcaagcgttcagcttcgaccaccactcaagttctggtctatcggaggagacatcacaacatcctaaaaggacctgagtcacaaacttg |
341 |
Q |
| |
|
|||| ||||||||| || ||||||||||||||||||||| || |||| |||||||||||||||||||| | |||||||||||||||| |||||||||| |
|
|
| T |
1799295 |
aatgatgttgcttcaaacgatcagcttcgaccaccactcaaattttggtttatcggaggagacatcacaatagcctaaaaggacctgagacacaaacttg |
1799196 |
T |
|
| Q |
342 |
ctcccgacctcgaatcaaaagcgatcatccca-aagactcccgaaacaaggcaaaaaggcacctatcaactcacgaaccatcagaacaaacaccttaacc |
440 |
Q |
| |
|
|||| ||||| |||||||||||| | | | |||||||| | ||||| |||||||||||| ||||||||||||||| | || || ||||||||||| |
|
|
| T |
1799195 |
ctcctgacctagaatcaaaagcgtttggtcaacaagactccttacacaagtcaaaaaggcacccctcaactcacgaaccaccggagcagacaccttaacc |
1799096 |
T |
|
| Q |
441 |
tgtccaaaaactcgacccaccaataacccgatgccaaaattcaaagacagagaaaaggcggaacagtagcgcaaagcaaaccagctcaaacacaaacaaa |
540 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||| ||||||||| ||||||| |
|
|
| T |
1799095 |
tatccaaaaactcgacccaccaataacccgatgccaaaatccaaagacagagaaaaggcagaacaatagcgcaaagtgaaccagctcgaacacaa----- |
1799001 |
T |
|
| Q |
541 |
tcaaaacaagccaccatatcaacctgcgtcaccaccacctgaatagaccaacacacaccccaaccctcggctaggcaagtacaaaccaccacgatcctta |
640 |
Q |
| |
|
|||||| |||||||| | |||||||| ||||||||||||||||||| | | ||||||||||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
1799000 |
-caaaaccagccaccaaaacaacctgcatcaccaccacctgaatagatcggcgcacaccccaaccctcggctagacaaccacaaaccaccacgatcctta |
1798902 |
T |
|
| Q |
641 |
caacgacgaatgatccgggagttgcgaagaaggaggtttaatcgtgaa |
688 |
Q |
| |
|
| | |||||| ||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
1798901 |
cgaagacgaacgatccgggagttgcgaagaaggaggattaatcgtgaa |
1798854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 246 - 696
Target Start/End: Complemental strand, 10388706 - 10388263
Alignment:
| Q |
246 |
attttgcttcaagcgttcagcttcgaccaccactcaagttctggtctatcggaggagacatcacaacatcctaaaaggacctgagtcacaaacttgctcc |
345 |
Q |
| |
|
|||||||||||| |||| |||||||||||||||||||| || |||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| |
|
|
| T |
10388706 |
attttgcttcaaacgtttagcttcgaccaccactcaagatccggtctatcagaggagacatcacaacagcctaaaaggacctgagtcataaacttgctcc |
10388607 |
T |
|
| Q |
346 |
cgacctcgaatcaaaagcgatcatccca-aagactcccgaaacaaggcaaaaaggcacctatcaactcacgaaccatcagaacaaacaccttaacctgtc |
444 |
Q |
| |
|
||||||||||||||||| |||| |||| ||||||| ||| |||| ||||||| || | |||||||||||| || ||| || ||||||| || |||| |
|
|
| T |
10388606 |
cgacctcgaatcaaaagtgatcggcccacaagactctcgacgcaagtcaaaaagacatccctcaactcacgaagcactagagcagacacctttacatgtc |
10388507 |
T |
|
| Q |
445 |
caaaaactcgacccaccaataacccgatgccaaaattcaaagacagagaaaaggcggaacagtagcgcaaagcaaaccagctcaaacacaaacaaatcaa |
544 |
Q |
| |
|
| |||||| |||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||| | ||||||| || ||| |
|
|
| T |
10388506 |
ccaaaacttgacccatcaataacccgatgccaaaatccaaagagagagaaaaggcggaacagtagcgcaaagcgaacggg------cacaaactaaccaa |
10388413 |
T |
|
| Q |
545 |
aacaagccaccatatcaacctgcgtcaccaccacctgaatagaccaacacacaccccaaccctcggctaggcaagtacaaaccaccacgatccttacaac |
644 |
Q |
| |
|
|| || |||||| |||||||||| |||||||||||||||||||| | ||||| || |||||||||| ||| ||||||||||| ||||||||| || |
|
|
| T |
10388412 |
aaaaatccaccaaatcaacctgcatcaccaccacctgaatagac--tggcgcacccaaaacctcggctagacaaccacaaaccaccatgatccttacgac |
10388315 |
T |
|
| Q |
645 |
gacgaatgatccgggagttgcgaagaaggaggtttaatcgtgaaggacctgc |
696 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
10388314 |
gacgaacgatccgggagttgcgaagaaggaggattaattgtgaaggacctgc |
10388263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 247 - 554
Target Start/End: Original strand, 17416446 - 17416754
Alignment:
| Q |
247 |
ttttgcttcaagcgttcagcttcgaccaccactcaagttctggtctatcggaggagacatcacaacatcctaaaaggacctgagtcacaaacttgctccc |
346 |
Q |
| |
|
||||||||||| | |||||||||||||||||||||| |||||||| |||||||||||||||||| | ||||||||||| | | | ||||| ||||| |
|
|
| T |
17416446 |
ttttgcttcaaacattcagcttcgaccaccactcaacatctggtctgtcggaggagacatcacaaaagcctaaaaggacataggcaaaaaactagctcct |
17416545 |
T |
|
| Q |
347 |
gacctcgaatcaaaagcgatcatcccaa-agactcccgaaacaaggcaaaaaggcacctatcaactcacgaaccatcagaacaaacaccttaacctgtcc |
445 |
Q |
| |
|
|| ||||||||||||| |||| |||| || ||| ||| || | || ||||||| ||||||||||||||| ||| | |||||||||||||||| |
|
|
| T |
17416546 |
gatctcgaatcaaaagtgatcggcccactaggctctcgacaccaatcatttaggcacccctcaactcacgaaccactagagtagacaccttaacctgtcc |
17416645 |
T |
|
| Q |
446 |
aaaaactcgacccaccaataacccgatgccaaaattcaaagacagagaaaaggcggaacagtagcgcaaagcaaaccagctcaaacacaaacaaatcaaa |
545 |
Q |
| |
|
||||||||| ||||| | |||| |||||||| | | ||||||||||||||| | |||| ||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
17416646 |
aaaaactcggcccacaataaaccaaatgccaaattcctaagacagagaaaaggtgaaacaatagcgcaaagcgaaccagctcgaacacaaacaaatcaaa |
17416745 |
T |
|
| Q |
546 |
acaagccac |
554 |
Q |
| |
|
||||||||| |
|
|
| T |
17416746 |
acaagccac |
17416754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 431 - 550
Target Start/End: Original strand, 23040625 - 23040744
Alignment:
| Q |
431 |
caccttaacctgtccaaaaactcgacccaccaataacccgatgccaaaattcaaagacagagaaaaggcggaacagtagcgcaaagcaaaccagctcaaa |
530 |
Q |
| |
|
|||||||||||||| ||||||||||||| |||| || ||||||||||||| || ||||||||||||| ||||||||||||||||||| ||||||||| || |
|
|
| T |
23040625 |
caccttaacctgtctaaaaactcgaccctccaaaaatccgatgccaaaatccatagacagagaaaagacggaacagtagcgcaaagcgaaccagctcgaa |
23040724 |
T |
|
| Q |
531 |
cacaaacaaatcaaaacaag |
550 |
Q |
| |
|
|||||| ||||||||||||| |
|
|
| T |
23040725 |
cacaaataaatcaaaacaag |
23040744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 315 - 546
Target Start/End: Original strand, 40813785 - 40814017
Alignment:
| Q |
315 |
cctaaaaggacctgagtcacaaacttg-ctcccgacctcgaatcaaaagcgatcatcccaa-agactcccgaaacaaggcaaaaaggcacctatcaactc |
412 |
Q |
| |
|
|||||||| |||||||||| ||| ||| ||||||| ||||||||||||| |||| |||| |||||||||| ||| || ||||||||| |||| || |
|
|
| T |
40813785 |
cctaaaagaacctgagtcaaaaaattggctcccgatctcgaatcaaaagtgatcggcccaccagactcccgacgcaaatcataaaggcacccttcaattc |
40813884 |
T |
|
| Q |
413 |
acgaaccatcagaacaaacaccttaacctgtccaaaaactcgacccaccaataacccgatgccaaaattcaaagacagagaaaaggcggaacagtagcgc |
512 |
Q |
| |
|
|||||||| ||| || |||||||||||| |||||||||||| ||||||| |||| |||||| |||||| ||| ||||||||||| ||||||||||||| |
|
|
| T |
40813885 |
acgaaccactagagcagacaccttaacctatccaaaaactcggcccaccataaaccagatgcc-aaattcgaaggcagagaaaaggtggaacagtagcgc |
40813983 |
T |
|
| Q |
513 |
aaagcaaaccagctcaaacacaaacaaatcaaaa |
546 |
Q |
| |
|
||| | ||||||||| || | ||||||| ||||| |
|
|
| T |
40813984 |
aaaacgaaccagctcgaatataaacaaaccaaaa |
40814017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 577 - 697
Target Start/End: Original strand, 17416852 - 17416972
Alignment:
| Q |
577 |
acctgaatagaccaacacacaccccaaccctcggctaggcaagtacaaaccaccacgatccttacaacgacgaatgatccgggagttgcgaagaaggagg |
676 |
Q |
| |
|
||||||||||||| |||||||||||||||||| |||| ||| |||||||| |||||||||||| |||||||| ||||| | |||| | ||||| || | |
|
|
| T |
17416852 |
acctgaatagaccggcacacaccccaaccctcgactagacaaccacaaaccatcacgatccttacgacgacgaacgatccagtagttacaaagaatgatg |
17416951 |
T |
|
| Q |
677 |
tttaatcgtgaaggacctgca |
697 |
Q |
| |
|
|||||||||||||| ||||| |
|
|
| T |
17416952 |
attaatcgtgaaggatctgca |
17416972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 350 - 564
Target Start/End: Original strand, 37707395 - 37707607
Alignment:
| Q |
350 |
ctcgaatcaaaagcgatcatcccaa-agactcccgaaacaaggcaaaaaggcacctatcaactcacgaaccatcagaacaaacaccttaacctgtccaaa |
448 |
Q |
| |
|
||||||||||||| |||| |||| |||||||||| ||| ||||||||||||| ||||||||||||||| |||| || ||||| || || |||||| |
|
|
| T |
37707395 |
ctcgaatcaaaagtgatcggcccaccagactcccgacacatagcaaaaaggcacccctcaactcacgaaccaccagagcagacaccaaaatctatccaaa |
37707494 |
T |
|
| Q |
449 |
aactcgacccaccaataacccgatgccaaaattcaaagacagagaaaaggcggaacagtagcgcaaagcaaaccagctcaaacacaaacaaatcaaaaca |
548 |
Q |
| |
|
||||||||||||||| |||| |||||| || |||||||| ||| | || |||| ||||| |||| | | ||||||| |||| |||||||||||| || |
|
|
| T |
37707495 |
aactcgacccaccaaaaaccagatgcc-aagctcaaagac--agacacggtggaatagtagtacaaatcgatccagctcgaacagaaacaaatcaaacca |
37707591 |
T |
|
| Q |
549 |
agccaccatatcaacc |
564 |
Q |
| |
|
|||||| | ||||||| |
|
|
| T |
37707592 |
agccacaaaatcaacc |
37707607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 150 - 230
Target Start/End: Complemental strand, 6760933 - 6760853
Alignment:
| Q |
150 |
aaaaaccaccagcaccctcaaaatgtcaaatcccctaacaacagttcctcaaagaaccaacaccgccaacagtgatcaatt |
230 |
Q |
| |
|
|||||||||||||| |||||||||| || |||||||||| || || ||||||||||||||||||||||||||||||||| |
|
|
| T |
6760933 |
aaaaaccaccagcatcctcaaaatgctgaaacccctaacaatagctcatcaaagaaccaacaccgccaacagtgatcaatt |
6760853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 706 - 781
Target Start/End: Complemental strand, 1798762 - 1798687
Alignment:
| Q |
706 |
tctttcgagcaataacaaccaagcaaccaaaacctaaagcaagagcaggaggcctccagcggcatggctccgaagg |
781 |
Q |
| |
|
|||||||||||| |||||||||| ||| ||| ||||| |||||||||||||||||||| |||| |||| |||||| |
|
|
| T |
1798762 |
tctttcgagcaacaacaaccaagtaactaaatcctaatccaagagcaggaggcctccagtggcaaggcttcgaagg |
1798687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 831 - 889
Target Start/End: Original strand, 26500852 - 26500910
Alignment:
| Q |
831 |
cgactctgagaagaaagtgaaccaccaaaaggttgagggagatctataaaacctcgacc |
889 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| ||||||||||||| | | |||||||| |
|
|
| T |
26500852 |
cgaccctgagaagaaagtgaaccaccaaaaggctgagggagatctagacagcctcgacc |
26500910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 269; Significance: 1e-150; HSPs: 11)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 150 - 692
Target Start/End: Complemental strand, 38388159 - 38387611
Alignment:
| Q |
150 |
aaaaaccaccagcaccctcaaaatgtcaaatcccctaacaacagttcctcaaagaaccaacaccgccaacagtgatcaatttggcacccaatggtgattt |
249 |
Q |
| |
|
||||||||||||||||||||||||| | || |||||||||||| ||||| ||||||||||||| ||||||||||||||| ||||||| || ||||||| |
|
|
| T |
38388159 |
aaaaaccaccagcaccctcaaaatgccgaaacccctaacaacaactcctcgaagaaccaacaccatcaacagtgatcaattaggcacccgatagtgattt |
38388060 |
T |
|
| Q |
250 |
tgcttcaagcgttcagcttcgaccaccactcaagttctggtctatcggaggagacatcacaacatcctaaaaggacctgagtcacaaacttgctcccgac |
349 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| || ||||||| || |||||||||||| | ||||||||||||||||||||||||||||||| ||| |
|
|
| T |
38388059 |
tgcttcaaacgttcagcttcgaccaccactcaagtcctagtctatcagatgagacatcacaatagcctaaaaggacctgagtcacaaacttgctcctgac |
38387960 |
T |
|
| Q |
350 |
ctcgaatcaaaagcgatcatccca-aagactcccgaaacaaggcaaaaaggcacctatcaactcacgaaccatcagaacaaacaccttaacctgtccaaa |
448 |
Q |
| |
|
|| |||||||||| ||| |||| ||||||||||| | ||| |||||||||||| ||||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
38387959 |
cttgaatcaaaagtgattggcccacaagactcccgacataagtcaaaaaggcacccctcaactcacgaaccaccagagcaaacaccttaacctgtccaaa |
38387860 |
T |
|
| Q |
449 |
aactcgacccaccaataacccgatgccaaaattcaaagacagagaaaaggcggaacagtagcgcaaagcaaaccagctcaaacac-----aaacaaatca |
543 |
Q |
| |
|
|||||||||||||||||||| |||| |||||| |||||| |||||||| | |||||| ||| ||||||| ||||||||| ||||| ||||||| || |
|
|
| T |
38387859 |
aactcgacccaccaataacctgatggcaaaatccaaagatagagaaaatggggaacaatagtgcaaagcgaaccagctcgaacacaaacaaaacaaaaca |
38387760 |
T |
|
| Q |
544 |
aaacaagccaccatatcaacctgcgtcaccaccacctgaatagaccaacacacaccccaaccctcggctaggcaagtacaaaccaccacgatccttacaa |
643 |
Q |
| |
|
||||||||||||| | |||||||| |||||||||| |||||||| | ||||||||||||||||||||| ||| | |||||| ||||||||| || |
|
|
| T |
38387759 |
aaacaagccaccaaaccaacctgcaagaccaccacctaaatagaccggcgcacaccccaaccctcggctagacaaccataaaccattacgatccttgaaa |
38387660 |
T |
|
| Q |
644 |
cgacgaatgatccgggagttgcgaagaaggaggtttaatcgtgaaggac |
692 |
Q |
| |
|
||||||| ||||| ||||||||||||||||| | ||||||||||||||| |
|
|
| T |
38387659 |
cgacgaacgatccaggagttgcgaagaaggatgattaatcgtgaaggac |
38387611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 150 - 586
Target Start/End: Original strand, 46066 - 46505
Alignment:
| Q |
150 |
aaaaaccaccagcaccctcaaaatgtcaaatcccctaacaacagttcctcaaagaaccaacaccgccaacagtgatcaatttggcacccaatggtgattt |
249 |
Q |
| |
|
||||||||| |||||||| |||||| ||||||||||||||| |||||||||||||||||| | ||||| ||||||||| | | || || ||||||| |
|
|
| T |
46066 |
aaaaaccactagcaccctgaaaatgatgaatcccctaacaacaactcctcaaagaaccaacactgtcaacaatgatcaattcgacgcctgatagtgattt |
46165 |
T |
|
| Q |
250 |
tgcttcaagcgttcagcttcgaccaccactcaagttctggtctatcggaggagacatcacaacatcctaaaaggacctgagtcacaaacttgctcccgac |
349 |
Q |
| |
|
|||||||| |||||| ||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
46166 |
tgcttcaaacgttcaactttgaccaccactcaagttccagtctatcggaggagacatcacaacaacctaaaaggacctgagtcagaaacttgctcccgac |
46265 |
T |
|
| Q |
350 |
ctcgaatcaaaagcgatcatccca-aagactcccgaaacaaggcaaaaaggcacctatcaactcacgaa-ccatcagaacaaacaccttaacctgtccaa |
447 |
Q |
| |
|
|| |||||||||||||| |||| ||||||||||| ||||| |||||||||||| |||||||||||| ||| | || || |||| | ||||||||||| |
|
|
| T |
46266 |
ctggaatcaaaagcgattggcccacaagactcccgacacaagtcaaaaaggcacccctcaactcacgaacccaccggagcagacacataaacctgtccaa |
46365 |
T |
|
| Q |
448 |
aaactcgacccaccaataacccgatgccaaaattcaaagacagagaaaaggcggaacagtagcgcaaagcaaaccagctcaaacacaaacaaatcaaaac |
547 |
Q |
| |
|
|||||||||||||||||||||||||| |||||| |||||||| |||| ||||||||||||||| |||||| |||| |||| ||||||||||||||||||| |
|
|
| T |
46366 |
aaactcgacccaccaataacccgatgtcaaaatccaaagacaaagaataggcggaacagtagcacaaagcgaaccggctcgaacacaaacaaatcaaaac |
46465 |
T |
|
| Q |
548 |
aagcc-accatatcaacctgcgtcaccaccacctgaatag |
586 |
Q |
| |
|
||||| |||| |||||||||| |||||||||| ||||||| |
|
|
| T |
46466 |
aagccaaccaaatcaacctgcatcaccaccacttgaatag |
46505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 150 - 691
Target Start/End: Complemental strand, 1579380 - 1578840
Alignment:
| Q |
150 |
aaaaaccaccagcaccctcaaaatgtcaaatcccctaacaacagttcctcaaagaaccaacaccgccaacagtgatcaatttggcacccaatggtgattt |
249 |
Q |
| |
|
||||||||||| ||||||||| || | || |||||||||| | || ||||||||||| |||| |||||| || ||| ||||||||| || || |
|
|
| T |
1579380 |
aaaaaccaccatcaccctcaagctgccgaaacccctaacaaaaactcatcaaagaacca-caccaccaacaatggacaaccaagcacccaataacgaatt |
1579282 |
T |
|
| Q |
250 |
tgcttcaagc-gttcagcttcgaccaccactcaagttctggtctatcggaggagacatcacaacatcctaaaaggacctgagtcacaa-acttgctcccg |
347 |
Q |
| |
|
||||||||| | |||||||||||||||||||||||| || |||||| | |||||||||||||| |||| ||||||||||||||||| ||||||||||| |
|
|
| T |
1579281 |
tgcttcaagatgctcagcttcgaccaccactcaagtttcggcctatcgcaagagacatcacaacaacctagaaggacctgagtcacaagacttgctcccg |
1579182 |
T |
|
| Q |
348 |
acctcgaatcaaaagcgatcatccca-aagactcccgaaacaaggcaaaaaggcacctatcaactcacgaaccatcagaacaaacaccttaacctgtcca |
446 |
Q |
| |
|
|| | |||||||||| |||| |||| ||||||||| | ||||| ||| ||||| | ||||||||||||||| |||| || |||||| ||||| |||| |
|
|
| T |
1579181 |
actttgaatcaaaagtgatcggcccacaagactcccaacacaagtaaaagaggcatccctcaactcacgaaccaccagagcagacacctaaacctatcca |
1579082 |
T |
|
| Q |
447 |
aaaactcgacccaccaataacccgatgccaaaattcaaagacagagaaaaggcggaacagtagcgcaaagcaaaccagctcaaacacaaacaaatcaaaa |
546 |
Q |
| |
|
||| || ||||| |||| ||| |||||||||||| ||||||||||||| | || ||| ||||||||||||| || || ||| ||||||||| ||||| |
|
|
| T |
1579081 |
aaaccttgacccgccaagaacacgatgccaaaatccaaagacagagaacaagcagaatagtagcgcaaagcgaatcaactcgaacacaaac---tcaaat |
1578985 |
T |
|
| Q |
547 |
caagccaccatatcaacctgcgtcaccaccacctgaatagaccaacacacaccccaaccctcggctaggcaagtacaaaccaccacgatccttacaacga |
646 |
Q |
| |
|
|||||||||| |||| |||| ||| ||||||| |||| ||| | ||| |||||||||||||||| || ||||||||||| ||||||||| |||| |
|
|
| T |
1578984 |
caagccaccaaatcactctgcatcagcaccacccgaattaaccggcgcacgccccaaccctcggctaaacagccacaaaccaccatgatccttacgacga |
1578885 |
T |
|
| Q |
647 |
cgaatgatccgggagttgcgaagaaggaggtttaatcgtgaagga |
691 |
Q |
| |
|
|||| |||||| |||||||||||||| || |||||||||||||| |
|
|
| T |
1578884 |
cgaacgatccgaaagttgcgaagaagggggattaatcgtgaagga |
1578840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 195 - 339
Target Start/End: Original strand, 4489610 - 4489754
Alignment:
| Q |
195 |
tcctcaaagaaccaacaccgccaacagtgatcaatttggcacccaatggtgattttgcttcaagcgttcagcttcgaccaccactcaagttctggtctat |
294 |
Q |
| |
|
||||||||||||||||||| |||| |||| | |||| |||| | || |||||||||||||| |||| |||||| |||||||||||||||| |||||| |
|
|
| T |
4489610 |
tcctcaaagaaccaacaccaccaatagtgttaaattaagcactcgataatgattttgcttcaaacgtttagcttctaccaccactcaagttccagtctat |
4489709 |
T |
|
| Q |
295 |
cggaggagacatcacaacatcctaaaaggacctgagtcacaaact |
339 |
Q |
| |
|
||||||||||||||||| | |||||||||| | |||| ||||||| |
|
|
| T |
4489710 |
cggaggagacatcacaaaagcctaaaaggatccgagttacaaact |
4489754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 705 - 778
Target Start/End: Original strand, 8044788 - 8044861
Alignment:
| Q |
705 |
ctctttcgagcaataacaaccaagcaaccaaaacctaaagcaagagcaggaggcctccagcggcatggctccga |
778 |
Q |
| |
|
||||||||||||||| || ||||||||||||| ||||| |||||||||||||||||||| |||| |||||||| |
|
|
| T |
8044788 |
ctctttcgagcaatatcagccaagcaaccaaatcctaacccaagagcaggaggcctccaggggcaaggctccga |
8044861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 215 - 295
Target Start/End: Complemental strand, 22916008 - 22915928
Alignment:
| Q |
215 |
ccaacagtgatcaatttggcacccaatggtgattttgcttcaagcgttcagcttcgaccaccactcaagttctggtctatc |
295 |
Q |
| |
|
|||||| |||||||||||||| || || |||| |||||||||| |||||||||||||| ||||||||| ||| |||||||| |
|
|
| T |
22916008 |
ccaacactgatcaatttggcatccgatagtgaatttgcttcaaacgttcagcttcgactaccactcaatttccggtctatc |
22915928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 836 - 889
Target Start/End: Original strand, 8044918 - 8044971
Alignment:
| Q |
836 |
ctgagaagaaagtgaaccaccaaaaggttgagggagatctataaaacctcgacc |
889 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
8044918 |
ctgagaagaaagtgaaccaccaaaaggttgagggagatctaggaagcctcgacc |
8044971 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 579 - 697
Target Start/End: Complemental strand, 33966892 - 33966777
Alignment:
| Q |
579 |
ctgaatagaccaacacacaccccaaccctcggctaggcaagtacaa-accaccacgatccttacaacgacgaatgatccgggagttgcgaagaaggaggt |
677 |
Q |
| |
|
||||||||||| |||||||| ||||| |||| || ||| |||| ||||||||||||||||||||||| |||||||||| |||||| |||||||| |
|
|
| T |
33966892 |
ctgaatagaccggcacacaccacaaccaccggcaagacaaccacaataccaccacgatccttacaacgac-aatgatccggaagttgc---gaaggagga |
33966797 |
T |
|
| Q |
678 |
ttaatcgtgaaggacctgca |
697 |
Q |
| |
|
|||||||||||||| ||||| |
|
|
| T |
33966796 |
ttaatcgtgaaggaactgca |
33966777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 693 - 781
Target Start/End: Complemental strand, 1578764 - 1578676
Alignment:
| Q |
693 |
ctgcatacctcgctctttcgagcaataacaaccaagcaaccaaaacctaaagcaagagcaggaggcctccagcggcatggctccgaagg |
781 |
Q |
| |
|
||||| |||| |||||||||||||| ||||||||||||||||||||| || || ||||||||| |||||| |||| |||||| |||| |
|
|
| T |
1578764 |
ctgcaaacctagctctttcgagcaacaacaaccaagcaaccaaaaccaaatccaggagcaggagacctccaacggctaggctccaaagg |
1578676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 479 - 583
Target Start/End: Original strand, 31179995 - 31180098
Alignment:
| Q |
479 |
attcaaagacagagaaaaggcggaacagtagcgcaaagcaaaccagctcaaacacaaacaaatcaaaacaagccaccatatcaacctgcgtcaccaccac |
578 |
Q |
| |
|
|||||||| ||||||||||| ||| || ||||| ||| | || ||||| |||||||||||| |||||||||||| | |||||||||| |||||||||| |
|
|
| T |
31179995 |
attcaaaggcagagaaaaggtggagcaatagcgaaaatcgaaacagcttgaacacaaacaaa-caaaacaagccatgaaatcaacctgcatcaccaccac |
31180093 |
T |
|
| Q |
579 |
ctgaa |
583 |
Q |
| |
|
|||| |
|
|
| T |
31180094 |
ttgaa |
31180098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 839 - 876
Target Start/End: Complemental strand, 1578218 - 1578181
Alignment:
| Q |
839 |
agaagaaagtgaaccaccaaaaggttgagggagatcta |
876 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
1578218 |
agaagaaattgaaccaccaaaaggctgagggagatcta |
1578181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 259; Significance: 1e-144; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 249 - 698
Target Start/End: Original strand, 4397369 - 4397817
Alignment:
| Q |
249 |
ttgcttcaagcgttcagcttcgaccaccactcaagttctggtctatcggaggagacatcacaacatcctaaaaggacctgagtcacaaacttgctcccga |
348 |
Q |
| |
|
||||||||| ||| |||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
4397369 |
ttgcttcaaacgtacagcttcgaccaccactcaagttccggtctttcggaggagacatcacaacaacctaaaaggacctgagtcacaaacttgctcccga |
4397468 |
T |
|
| Q |
349 |
cctcgaatcaaaagcgatcatccca-aagactcccgaaacaaggcaaaaaggcacctatcaactcacgaaccatcagaacaaacaccttaacctgtccaa |
447 |
Q |
| |
|
|||||||||||||||||||| |||| ||||||||||| | ||| ||||| |||||| ||||||||||||||| || | || |||| | ||| ||||||| |
|
|
| T |
4397469 |
cctcgaatcaaaagcgatcagcccacaagactcccgagagaagtcaaaatggcacccctcaactcacgaaccaccatagcagacacataaacttgtccaa |
4397568 |
T |
|
| Q |
448 |
aaactcgacccaccaataacccgatgccaaaattcaaagacagagaaaaggcggaacagtagcgcaaagcaaaccagctcaaacacaaacaaatcaaaac |
547 |
Q |
| |
|
|||||||||||||||||||| | |||||||||| ||||||||||| |||||||||||||||||||||||| || |||||| ||||||||||||||||||| |
|
|
| T |
4397569 |
aaactcgacccaccaataactctatgccaaaatccaaagacagag-aaaggcggaacagtagcgcaaagcgaa-cagctcgaacacaaacaaatcaaaac |
4397666 |
T |
|
| Q |
548 |
aagccaccatatcaacctgcgtcaccaccacctgaatagaccaacacacaccccaaccctcggctaggcaagtacaaaccaccacgatccttacaacgac |
647 |
Q |
| |
|
||||||||| |||||||||| ||||||||||| ||| ||||| | ||||||||||||||||||||| ||| ||||||||||| ||||||||| ||||| |
|
|
| T |
4397667 |
aagccaccaaatcaacctgcatcaccaccaccagaaaagaccggcgcacaccccaaccctcggctagacaaccacaaaccaccatgatccttacgacgac |
4397766 |
T |
|
| Q |
648 |
gaatgatccgggagttgcgaagaaggaggtttaatcgtgaaggacctgcat |
698 |
Q |
| |
|
|| ||||| ||||||| ||||||||||| ||||||||||||||| ||||| |
|
|
| T |
4397767 |
gaccgatccaggagttgtgaagaaggaggattaatcgtgaaggacatgcat |
4397817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 150 - 582
Target Start/End: Original strand, 37128763 - 37129196
Alignment:
| Q |
150 |
aaaaaccaccagcaccctcaaaatgtcaaatcccctaacaacagttcctcaaagaaccaacaccgccaacagtgatcaatttggcacccaatggtgattt |
249 |
Q |
| |
|
||||||||||||||||||||||||| | |||||||||| ||||| |||||||||||||||||||||||||| |||| |||| ||||||| || ||||||| |
|
|
| T |
37128763 |
aaaaaccaccagcaccctcaaaatgccgaatcccctaaaaacagctcctcaaagaaccaacaccgccaacaatgatgaattaggcacccgatagtgattt |
37128862 |
T |
|
| Q |
250 |
tgcttcaagcgttcagcttcgaccaccactcaagttctggtctatcggaggagacatcacaacatcctaaaaggacctgagtcacaaacttgctcccgac |
349 |
Q |
| |
|
||| |||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||| ||| |
|
|
| T |
37128863 |
tgcatcaaatgttcagcttcgaccaccattcaagtttcggtctatcggaggagacatcacaacatcctgaaaggacttgagtcacaaacttgttccggac |
37128962 |
T |
|
| Q |
350 |
ctcgaatcaaaagcgatcatccca-aagactcccgaaacaaggcaaaaaggcacctatcaactcacgaaccatcagaacaaacaccttaacctgtccaaa |
448 |
Q |
| |
|
|||||||||||||||||| |||| |||||||| | ||||| ||||||||||||||||||||||||||||| |||| || |||||| |||||||||||| |
|
|
| T |
37128963 |
ctcgaatcaaaagcgatcggcccacaagactcctaacacaagtcaaaaaggcacctatcaactcacgaaccaccagagcagacacctgaacctgtccaaa |
37129062 |
T |
|
| Q |
449 |
aactcgacccaccaataacccgatgccaaaattcaaagacagagaaaaggcggaacagtagcgcaaagcaaaccagctcaaacacaaacaaatcaaaaca |
548 |
Q |
| |
|
||||| ||| ||||| || |||||| |||||| |||||||||| |||||||||||||||||||| || | ||||||||| |||||||||||||||||| | |
|
|
| T |
37129063 |
aactcaaccaaccaaaaatccgatgtcaaaatccaaagacagaaaaaaggcggaacagtagcgccaaacgaaccagctcgaacacaaacaaatcaaaata |
37129162 |
T |
|
| Q |
549 |
agccaccatatcaacctgcgtcaccaccacctga |
582 |
Q |
| |
|
| |||||| | | |||| |||||||||||||| |
|
|
| T |
37129163 |
atccaccaaaaccgtctgcatcaccaccacctga |
37129196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 165 - 522
Target Start/End: Complemental strand, 41958458 - 41958100
Alignment:
| Q |
165 |
cctcaaaatgtcaaatcccctaacaacagttcctcaaagaaccaacaccgccaacagtgatcaatttggcacccaatggtgattttgcttcaagcgttca |
264 |
Q |
| |
|
|||||||||| | ||||||||||||||| | ||||||||||||||| ||||||||||||| |||| ||| ||| || ||||||||| ||||| ||||| |
|
|
| T |
41958458 |
cctcaaaatgccgaatcccctaacaacaacttctcaaagaaccaacatcgccaacagtgatgaattaggcgcccgatagtgattttgtttcaaatgttca |
41958359 |
T |
|
| Q |
265 |
gcttcgaccaccactcaagttctggtctatcggaggagacatcacaacatcctaaaaggacctgagtcacaaacttgctcccgacctcgaatcaaaagcg |
364 |
Q |
| |
|
||||||||||||||||||||| |||||||| |||||||| | |||||| |||||||||||||||||||||||||||| |||||||||||||||||| | |
|
|
| T |
41958358 |
gcttcgaccaccactcaagtttcggtctatcagaggagacgttacaacagactaaaaggacctgagtcacaaacttgcttccgacctcgaatcaaaagtg |
41958259 |
T |
|
| Q |
365 |
atcatcccaaagactcccgaaacaaggcaaaaaggcacctatcaactcacgaaccatcagaacaaacaccttaacctgtccaaaaactcgacccacca-- |
462 |
Q |
| |
|
|| || |||||||| || ||||| |||||||||||| ||||||||| ||||| |||| || ||||||||||||||||||||| | ||||| || |
|
|
| T |
41958258 |
gtcggccacaagactcctgacacaagtcaaaaaggcacccttcaactcacaaaccaccagagcagacaccttaacctgtccaaaaatccaacccatcaat |
41958159 |
T |
|
| Q |
463 |
ataacccgatgccaaaattcaaagacagagaaaaggcggaacagtagcgcaaagcaaacc |
522 |
Q |
| |
|
|||||||||||||||||| | ||||||||| ||||| ||||| ||||||||||| |||| |
|
|
| T |
41958158 |
ataacccgatgccaaaatccgaagacagag-aaaggtagaacattagcgcaaagcgaacc |
41958100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 289 - 578
Target Start/End: Original strand, 42048194 - 42048485
Alignment:
| Q |
289 |
gtctatcggaggagacatcacaacatcctaaaaggacctgagtcacaaa-cttgctcccgacctcgaatcaaaagcgatcatcccaaag-actcccgaaa |
386 |
Q |
| |
|
||||||||||||||||||| | | ||||||||||| ||||||| ||| || ||||||| ||||||||||||| ||||| |||| | |||||||| | |
|
|
| T |
42048194 |
gtctatcggaggagacatccatatagcctaaaaggacttgagtcaaaaaactggctcccggtctcgaatcaaaagtgatcagcccatcggactcccgaca |
42048293 |
T |
|
| Q |
387 |
caaggcaaaaaggcacctatcaactcacgaaccatcagaacaaacaccttaacctgtccaaaaactcgacccaccaataacccgatgccaaaattcaaag |
486 |
Q |
| |
|
|| ||| ||||||||| ||||||||||||||| |||| || |||||||||| |||||||||||||| ||||||| || || || |||||| | | ||| |
|
|
| T |
42048294 |
gaaatcaacaaggcacctctcaactcacgaaccaccagagcagacaccttaacatgtccaaaaactcggcccaccattatccagaggccaaattcctaag |
42048393 |
T |
|
| Q |
487 |
acagagaaaaggcggaacagtagcgcaaagcaaaccagctcaaacacaaacaaatcaaaacaagccaccatatcaacctgcgtcaccaccac |
578 |
Q |
| |
|
|||||| |||| |||||| | ||||| | ||||||||| |||| ||||||| ||||||||||||| | |||||| ||| || ||||||| |
|
|
| T |
42048394 |
acagagggaaggtggaacaacaatgcaaatcgaaccagctcgaacataaacaaaccaaaacaagccacaaaatcaacatgcatcgccaccac |
42048485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 579 - 697
Target Start/End: Original strand, 42048995 - 42049113
Alignment:
| Q |
579 |
ctgaatagaccaacacacaccccaaccctcggctaggcaagtacaaaccaccacgatccttacaacgacgaatgatccgggagttgcgaagaaggaggtt |
678 |
Q |
| |
|
||||||||||||||||||| | ||||| | | || ||| ||||||||||||||||||||| |||| ||| ||||||| |||| |||||||||||| | |
|
|
| T |
42048995 |
ctgaatagaccaacacacatcacaaccaccaacaagacaaccacaaaccaccacgatccttacgacgaggaacgatccggaagttacgaagaaggaggat |
42049094 |
T |
|
| Q |
679 |
taatcgtgaaggacctgca |
697 |
Q |
| |
|
|||||||||||||| |||| |
|
|
| T |
42049095 |
taatcgtgaaggacttgca |
42049113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 260 - 367
Target Start/End: Original strand, 4161968 - 4162077
Alignment:
| Q |
260 |
gttcagcttcgaccaccactcaagttctggtctatcggaggagacatcacaa-catcctaaaaggacctgagtcacaaa-cttgctcccgacctcgaatc |
357 |
Q |
| |
|
|||||| ||||||||||| |||| |||| |||| |||||| ||||| || || | ||||||| ||||||| ||| ||| || |||||||| |||||||| |
|
|
| T |
4161968 |
gttcagattcgaccaccaatcaacttctagtctgtcggagaagacaccaaaataagcctaaaaagacctgactcaaaaagctggctcccgatctcgaatc |
4162067 |
T |
|
| Q |
358 |
aaaagcgatc |
367 |
Q |
| |
|
||||| |||| |
|
|
| T |
4162068 |
aaaagtgatc |
4162077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 238; Significance: 1e-131; HSPs: 17)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 154 - 549
Target Start/End: Complemental strand, 35847335 - 35846938
Alignment:
| Q |
154 |
accaccagcaccctcaaaatgtcaaatcccctaacaacagttcctcaaagaaccaacaccgccaacagtgatcaatttggcacccaatggtgattttgct |
253 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| | ||||||| ||||||| || ||||||||||| |
|
|
| T |
35847335 |
accaccagcaccctcaaaatgtcgaatcccctaacaacaactcctcaaagaaccaacaccgccaacatttatcaattaggcacccgatagtgattttgct |
35847236 |
T |
|
| Q |
254 |
tcaagcgttcagcttcgaccaccactcaagttctggtctatcggaggagacatcacaacatcctaaaaggacctgagtcacaaacttgctcccgacctcg |
353 |
Q |
| |
|
|||| |||||||||||||||||||||||||| | ||||||||||||||||||||||| || |||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
35847235 |
tcaaacgttcagcttcgaccaccactcaagtcccggtctatcggaggagacatcacagcagcctaaaaggacccgagtcacaaacgtgctcccgacctcg |
35847136 |
T |
|
| Q |
354 |
aatcaaaagcgatcatccca-aagactcccgaaacaaggc-aaaaaggcacctatcaactcacgaaccatcagaacaaacaccttaacctgtccaaaaac |
451 |
Q |
| |
|
|||||||| ||||| |||| || |||||||| ||||| | ||||||||||| |||||||||| ||||| |||| || |||||||||| ||||||||||| |
|
|
| T |
35847135 |
aatcaaaatcgatcggcccacaaaactcccgacacaagtcaaaaaaggcacccatcaactcacaaaccaccagagcagacaccttaacatgtccaaaaac |
35847036 |
T |
|
| Q |
452 |
tcgacccaccaataacccgatgccaaaattcaaagacagagaaaaggcggaacagtagcgcaaagcaaaccagctcaaacacaaacaaatcaaaacaa |
549 |
Q |
| |
|
| ||||||||||||||||||||||||||| |||||||| |||||||| |||||| |||| ||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
35847035 |
ttgacccaccaataacccgatgccaaaatccaaagacaaagaaaaggtggaacaatagcataaagcgaaccagctcgaacacaaacaaatcaaaacaa |
35846938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 150 - 535
Target Start/End: Original strand, 42742178 - 42742561
Alignment:
| Q |
150 |
aaaaaccaccagcaccctcaaaatgtcaaatcccctaacaacagttcctcaaagaaccaacaccgccaacagtgatcaatttggcacccaatggtgattt |
249 |
Q |
| |
|
||||||||||||||||||||||||| || ||||||||||||| |||||||||||||||||||| |||||||| ||||| |||||| | | |||||| |
|
|
| T |
42742178 |
aaaaaccaccagcaccctcaaaatgctgaaacccctaacaacagctcctcaaagaaccaacaccgtgaacagtga-caattaggcacctgaag-tgattt |
42742275 |
T |
|
| Q |
250 |
tgcttcaagcgttcagcttcgaccaccactcaagttctggtctatcggaggagacatcacaacatcctaaaaggacctgagtcacaaacttgctcccgac |
349 |
Q |
| |
|
| |||||| ||| || ||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
42742276 |
tccttcaaacgtacaactttgaccaccactcaagttccagtctatcggaggagacatcacaacagcctaaaaggacatgagtcacaaacttgctcccgac |
42742375 |
T |
|
| Q |
350 |
ctcgaatcaaaagcgatcatcccaaagactcccgaaacaaggcaaaaaggcacctatcaactcacgaaccatcagaacaaacaccttaacctgtccaaaa |
449 |
Q |
| |
|
|||||||||||||||||| || ||||||||||| ||||| |||||||||||| |||| ||||||||| |||| || |||||| ||||||| ||||| |
|
|
| T |
42742376 |
ctcgaatcaaaagcgatcgcccacaagactcccgacacaagtcaaaaaggcaccccacaacccacgaaccaccagagcagacacctaaacctgttcaaaa |
42742475 |
T |
|
| Q |
450 |
actcgacccaccaataacccgatgccaaaattcaaagacagagaaaaggcggaacagtagcgcaaagcaaaccagctcaaacacaa |
535 |
Q |
| |
|
||| ||||||||||||||||||||||||||| |||| ||||||||||| | |||||||||||||||| ||| | ||||||||||| |
|
|
| T |
42742476 |
acttgacccaccaataacccgatgccaaaatccaaaaacagagaaaagttgaaacagtagcgcaaagccaactaactcaaacacaa |
42742561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 168; E-Value: 2e-89
Query Start/End: Original strand, 150 - 563
Target Start/End: Complemental strand, 29686068 - 29685654
Alignment:
| Q |
150 |
aaaaaccaccagcaccctcaaa-atgtcaaatcccctaacaacagttcctcaaagaaccaacaccgccaacagtgatcaatttggcacccaatggtgatt |
248 |
Q |
| |
|
|||||||||||||| ||||||| ||||| || |||||||||||| ||||||||||||||||||| |||||||| |||||| ||||| || ||| | |
|
|
| T |
29686068 |
aaaaaccaccagcatcctcaaacatgtcgaaacccctaacaacaactcctcaaagaaccaacaccatcaacagtggtcaattaagcacctgataatgact |
29685969 |
T |
|
| Q |
249 |
ttgcttcaagcgttcagcttcgaccaccactcaagttctggtctatcggaggagacatcacaacatcctaaaaggacctgagtcacaaacttgctcccga |
348 |
Q |
| |
|
||||||||| ||||||||||| |||||||| ||| ||| ||||||||||||||||| |||||| | |||||||||| |||||||||||||| |||||||| |
|
|
| T |
29685968 |
ttgcttcaaacgttcagcttccaccaccacacaaattccggtctatcggaggagacttcacaaaagcctaaaaggatctgagtcacaaactagctcccga |
29685869 |
T |
|
| Q |
349 |
cctcgaatcaaaagcgatcatccca-aagactcccgaaacaaggcaaaaaggcacctatcaactcacgaaccatcagaacaaacaccttaacctgtccaa |
447 |
Q |
| |
|
| |||||||||||| |||| |||| |||||||||| ||| | || |||| || ||||||||||||||| |||| || || ||||||||||| ||| |
|
|
| T |
29685868 |
cttcgaatcaaaagtgatcgacccattagactcccgacacaggtcattaaggtactcctcaactcacgaaccaccagagcagaccccttaacctgttcaa |
29685769 |
T |
|
| Q |
448 |
aaactcgacccaccaataacccgatgccaaaattcaaagacagagaaaaggcggaacagtagcgcaaagcaaaccagctcaaacacaaacaaatcaaaac |
547 |
Q |
| |
|
|||||| |||||||||||||| |||||||| | ||||||||||||||||| ||||||||| ||||||| ||||||||| ||||||||| ||||||||| |
|
|
| T |
29685768 |
aaactcaacccaccaataaccatatgccaaattccaaagacagagaaaaggtggaacagtaacgcaaagtgaaccagctcgaacacaaac-aatcaaaac |
29685670 |
T |
|
| Q |
548 |
aagccaccatatcaac |
563 |
Q |
| |
|
||||||| | |||||| |
|
|
| T |
29685669 |
aagccacaaaatcaac |
29685654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 178 - 497
Target Start/End: Complemental strand, 3204495 - 3204173
Alignment:
| Q |
178 |
aatcccctaacaacagttcctcaaagaaccaacaccgccaacagtgatcaatttggcacccaatggtgattttgcttcaagcgttcagcttcgaccacca |
277 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| ||| ||||||||| ||||| | ||||||||| ||| |||||||||| |||||||| |
|
|
| T |
3204495 |
aatcccctaacaacaactcctcaaagaaccaacaccgtcaatagtgatcaaaaaggcactcggaaaagattttgctccaa-cgttcagctttgaccacca |
3204397 |
T |
|
| Q |
278 |
ctcaagttctggtctatcggaggagacatcacaacatcctaaaaggacctgagtcacaaacttgctcccgacctcgaatcaaaagcga-tcatcccaaag |
376 |
Q |
| |
|
|||||||||| || |||||||||||||||||||||| |||||||| | || ||||||||||||||||||||||||||||||||| ||| | ||| ||| |
|
|
| T |
3204396 |
ctcaagttctagtatatcggaggagacatcacaacagcctaaaagaatctaagtcacaaacttgctcccgacctcgaatcaaaaacgattggtccacaag |
3204297 |
T |
|
| Q |
377 |
actcccgaaacaaggcaaaaaggcacctatcaactcacgaaccatcagaacaaacacc----ttaacctgtccaaaaactcgacccaccaataacccgat |
472 |
Q |
| |
|
||| | || ||||| ||||||||||| ||||||||||| ||| |||| || ||||| |||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
3204296 |
act-ctgacacaagttaaaaaggcacccctcaactcacgagccaccagagcatacaccttaattaacctgaccaaaacctcgacccaccaataacccgat |
3204198 |
T |
|
| Q |
473 |
gccaaaattcaaagacagagaaaag |
497 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
3204197 |
gccaaaattcaaagacagagaaaag |
3204173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 150 - 488
Target Start/End: Complemental strand, 2707303 - 2706963
Alignment:
| Q |
150 |
aaaaaccaccagcaccctcaaa-atgtcaaatcccctaacaacagttcctcaaagaaccaacaccgccaacagtgatcaatttggcacccaatggtgatt |
248 |
Q |
| |
|
|||||||||||||||||||||| ||||| || |||||||||| || |||||| | |||||||||| |||||||| ||||||| ||||||| | ||||| |
|
|
| T |
2707303 |
aaaaaccaccagcaccctcaaacatgtcgaaacccctaacaatagctcctcagataaccaacaccaccaacagtaatcaattaagcacccagtaatgatt |
2707204 |
T |
|
| Q |
249 |
ttgcttcaagcgttcagcttcgaccaccactcaagttctggtctatcggaggagacatcacaacatcctaaaaggacctgagtcacaaacttgctcccga |
348 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||| | ||| |||||||||||| ||| | ||||||||||| ||||||||||||| |||||||| |
|
|
| T |
2707203 |
ttgcttcaaacgttcagctttgaccaccactcaagttacgatctttcggaggagacaatgcaaaagcctaaaaggacatgagtcacaaactagctcccga |
2707104 |
T |
|
| Q |
349 |
cctcgaatcaaaagcgatc-atcccaaagactcccgaaacaaggcaaaaaggcacctatcaactcacgaaccatcagaacaaacaccttaacctgtccaa |
447 |
Q |
| |
|
|||||||||||||| |||| | | |||||||||| ||||| || || ||||| ||||||||||||||| | || || ||||||||||||||||| |
|
|
| T |
2707103 |
cctcgaatcaaaagtgatcggttcactagactcccgacacaagtcattaaagcacccctcaactcacgaaccaccggagcaggcaccttaacctgtccaa |
2707004 |
T |
|
| Q |
448 |
aaactcgacccaccaataacccgatgccaaaattcaaagac |
488 |
Q |
| |
|
|||||| | ||||||||||| ||||||||| | ||||||| |
|
|
| T |
2707003 |
gaactcggcacaccaataaccagatgccaaattccaaagac |
2706963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 125; E-Value: 7e-64
Query Start/End: Original strand, 150 - 346
Target Start/End: Complemental strand, 25362514 - 25362318
Alignment:
| Q |
150 |
aaaaaccaccagcaccctcaaaatgtcaaatcccctaacaacagttcctcaaagaaccaacaccgccaacagtgatcaatttggcacccaatggtgattt |
249 |
Q |
| |
|
||||||||||| |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||| || | ||||| |
|
|
| T |
25362514 |
aaaaaccaccatcaccctcaaaatgttgaatcccctaacaacaactcctcaaagaactaacaccgccaacagtgatcaattaggcacccgatagagattt |
25362415 |
T |
|
| Q |
250 |
tgcttcaagcgttcagcttcgaccaccactcaagttctggtctatcggaggagacatcacaacatcctaaaaggacctgagtcacaaacttgctccc |
346 |
Q |
| |
|
|||||||| ||||||||||| | |||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
25362414 |
tgcttcaaacgttcagcttcaatcaccactcaagttccggtctatcaatggagacatcacaacagcctaaaaggacctgagtcacaaacttgctccc |
25362318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 120; E-Value: 7e-61
Query Start/End: Original strand, 150 - 420
Target Start/End: Complemental strand, 39369102 - 39368832
Alignment:
| Q |
150 |
aaaaaccaccagcaccctcaaaatgtcaaatcccctaacaacagttcctcaaagaaccaacaccgccaacagtgatcaatttggcacccaatggtgattt |
249 |
Q |
| |
|
|||||||| ||||| ||||||||| |||| ||||||||||||| ||||| ||||||||||| ||||||||||||| ||| ||||||| | | ||| | |
|
|
| T |
39369102 |
aaaaaccattagcactctcaaaatgccaaaacccctaacaacagctcctccaagaaccaacatcgccaacagtgataaataaggcacccgaag-tgacat |
39369004 |
T |
|
| Q |
250 |
tgcttcaagcgttcagcttcgaccaccactcaagttctggtctatcggaggagacatcacaacatcctaaaaggacctgagtcacaaacttgctcccgac |
349 |
Q |
| |
|
|||||||| ||||||||||||||||||||||| || | |||| | ||||||||| ||||||| |||||||| |||||||||| ||||||||||||||| |
|
|
| T |
39369003 |
tgcttcaaacgttcagcttcgaccaccactcacgtcccggtcgcactgaggagacaacacaacaacctaaaagaacctgagtcaaaaacttgctcccgac |
39368904 |
T |
|
| Q |
350 |
ctcgaatcaaaagcgatcatccca-aagactcccgaaacaaggcaaaaaggcacctatcaactcacgaacca |
420 |
Q |
| |
|
||||||||||||||| || |||| ||||||||||| ||||| ||||||| ||||| ||||||||||||||| |
|
|
| T |
39368903 |
ctcgaatcaaaagcggtcggcccacaagactcccgacacaagtcaaaaagacacctctcaactcacgaacca |
39368832 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 487 - 697
Target Start/End: Complemental strand, 39368815 - 39368611
Alignment:
| Q |
487 |
acagagaaaaggcggaacagtagcgcaaagcaaaccagctcaaacacaaacaaatcaaaacaagccaccatatcaacctgcgtcaccaccacctgaatag |
586 |
Q |
| |
|
||||||||||||||||||| |||||| ||||||||||||| |||||||||| |||||||||||||||| | |||| ||| |||||||||||||||||| |
|
|
| T |
39368815 |
acagagaaaaggcggaacaaaagcgcacagcaaaccagctcgaacacaaaca--tcaaaacaagccaccaaaacaacttgcatcaccaccacctgaatag |
39368718 |
T |
|
| Q |
587 |
accaacacacaccccaaccctcggctaggcaagtacaaaccaccacgatccttacaacgacgaatgatccgggagttgcgaagaaggaggtttaatcgtg |
686 |
Q |
| |
|
||| | ||||||||||||||| ||||||||| ||| |||||| |||||||||| ||||| || |||||||||||||| |||||||| ||||||||| |
|
|
| T |
39368717 |
accggcgcacaccccaaccctcagctaggcaaccacacaccaccgcgatccttacgacgac-aacgatccgggagttgc---gaaggaggattaatcgtg |
39368622 |
T |
|
| Q |
687 |
aaggacctgca |
697 |
Q |
| |
|
||||||||||| |
|
|
| T |
39368621 |
aaggacctgca |
39368611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 150 - 284
Target Start/End: Complemental strand, 17218956 - 17218822
Alignment:
| Q |
150 |
aaaaaccaccagcaccctcaaaatgtcaaatcccctaacaacagttcctcaaagaaccaacaccgccaacagtgatcaatttggcacccaatggtgattt |
249 |
Q |
| |
|
||||||||||||||||||||||||| | ||| ||||||||||| || ||||||||||||||||||||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
17218956 |
aaaaaccaccagcaccctcaaaatgccgaataccctaacaacaactcatcaaagaaccaacaccgccaacagtgaacaattaggcacccaatagtgattt |
17218857 |
T |
|
| Q |
250 |
tgcttcaagcgttcagcttcgaccaccactcaagt |
284 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| |
|
|
| T |
17218856 |
tgcttcaaaagttcagcttcgaccaccactcaagt |
17218822 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 205 - 337
Target Start/End: Complemental strand, 40377781 - 40377649
Alignment:
| Q |
205 |
accaacaccgccaacagtgatcaatttggcacccaatggtgattttgcttcaagcgttcagcttcgaccaccactcaagttctggtctatcggaggagac |
304 |
Q |
| |
|
|||||||||||||||||||||||||| || | |||| |||||||| |||||| ||||||| ||| ||||||||||||| || ||||||||||||||||| |
|
|
| T |
40377781 |
accaacaccgccaacagtgatcaattaggtcctcaatagtgattttacttcaaacgttcaggttccaccaccactcaagatccggtctatcggaggagac |
40377682 |
T |
|
| Q |
305 |
atcacaacatcctaaaaggacctgagtcacaaa |
337 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| |
|
|
| T |
40377681 |
atcacaacagcctaaaaggacctgagtcacaaa |
40377649 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 577 - 697
Target Start/End: Complemental strand, 29685617 - 29685497
Alignment:
| Q |
577 |
acctgaatagaccaacacacaccccaaccctcggctaggcaagtacaaaccaccacgatccttacaacgacgaatgatccgggagttgcgaagaaggagg |
676 |
Q |
| |
|
|||||||||||||| |||| |||||||| ||||||| || ||||||||||||||||||||| |||||||| ||| ||||||||||||||||||||| |
|
|
| T |
29685617 |
acctgaatagaccattgcacatcccaacccacggctagaaaaccacaaaccaccacgatccttacgacgacgaacgattcgggagttgcgaagaaggagg |
29685518 |
T |
|
| Q |
677 |
tttaatcgtgaaggacctgca |
697 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
29685517 |
attaatcgtgaaggacctgca |
29685497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 259 - 583
Target Start/End: Complemental strand, 25341831 - 25341507
Alignment:
| Q |
259 |
cgttcagcttcgaccaccactcaagttctggtctatcggaggagacatcacaacatcctaaaaggacctgagtcacaaa-cttgctcccgacctcgaatc |
357 |
Q |
| |
|
||||||||||| ||||||| |||| ||| |||| |||||||||||||||||| | |||||||||||||| |||| ||| || ||| | | ||| |||| |
|
|
| T |
25341831 |
cgttcagcttctaccaccaatcaacttccggtcagtcggaggagacatcacaaaagcctaaaaggacctgtgtcaaaaatctaactctcaatctcaaatc |
25341732 |
T |
|
| Q |
358 |
aaaagcgatcatcccaa-agactcccgaaacaaggcaaaaaggcacctatcaactcacgaaccatcagaacaaacaccttaacctgtccaaaaactcgac |
456 |
Q |
| |
|
||||| |||| |||| |||||||||| ||| || |||||||| | |||||||||| || |||| || | |||||||| |||| ||||| ||| | |
|
|
| T |
25341731 |
aaaagtgatcggcccaccagactcccgacacacatcatcaaggcacccctgaactcacgaagcaccagagcagaaaccttaacatgtcgaaaaattcggc |
25341632 |
T |
|
| Q |
457 |
ccaccaataacccgatgccaaaattcaaagacagagaaaaggcggaacagtagcgcaaagcaaaccagctcaaacacaaacaaatcaaaacaagccacca |
556 |
Q |
| |
|
| || || || ||||||||| | | |||||| | ||||| | |||| ||||||||| | ||||||||| | |||||||||||||||||||||||| | |
|
|
| T |
25341631 |
gcgcctttatccagatgccaaattcctaagacatataaaagttg-aacaatagcgcaaa-cgaaccagctcgagcacaaacaaatcaaaacaagccacaa |
25341534 |
T |
|
| Q |
557 |
tatcaacctgcgtcaccaccacctgaa |
583 |
Q |
| |
|
|| ||||||| |||||||||| |||| |
|
|
| T |
25341533 |
aattaacctgcatcaccaccacttgaa |
25341507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 350 - 554
Target Start/End: Complemental strand, 18557577 - 18557376
Alignment:
| Q |
350 |
ctcgaatcaaaagcgatcatcccaaagactcccgaaacaaggcaaaaaggcacctatcaactcacgaaccatcagaacaaacaccttaacctgtccaaaa |
449 |
Q |
| |
|
||||||||||||| |||| |||| |||||||||| |||| ||||| |||||| ||||||||||| ||| |||| | ||||||||||||| || || |
|
|
| T |
18557577 |
ctcgaatcaaaagtgatcggcccatagactcccgacacaaatcaaaacggcacccctcaactcacgacccaccagagtagacaccttaacctgccc--aa |
18557480 |
T |
|
| Q |
450 |
actcgacccaccaataacccgatgccaaaattcaaagacagagaaaaggcggaacagtagcgcaaagcaaaccagctcaaacacaaacaaatcaaaacaa |
549 |
Q |
| |
|
||||| |||||||||| ||| ||||| ||| || |||||| |||||||| |||||| |||||||| | | ||||||| |||| |||||| ||| |||| |
|
|
| T |
18557479 |
actcggcccaccaatatcccaatgcc-aaactcgaagacaaagaaaaggtggaacaacagcgcaaatcgatccagctcgaacaacaacaaaccaacacaa |
18557381 |
T |
|
| Q |
550 |
gccac |
554 |
Q |
| |
|
||||| |
|
|
| T |
18557380 |
gccac |
18557376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 693 - 781
Target Start/End: Complemental strand, 39368542 - 39368454
Alignment:
| Q |
693 |
ctgcatacctcgctctttcgagcaataacaaccaagcaaccaaaacctaaagcaagagcaggaggcctccagcggcatggctccgaagg |
781 |
Q |
| |
|
||||| |||| |||||||| ||||| |||| ||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
39368542 |
ctgcacacctagctctttcaagcaacaacagccaagcaaccaaaacctaatcaaagagcaggaggcctccaacggcaaggctccgaagg |
39368454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 150 - 321
Target Start/End: Original strand, 2334583 - 2334755
Alignment:
| Q |
150 |
aaaaaccaccagcaccctcaaaatgtcaaatcccctaacaacagttcctcaaag-aaccaacaccgccaa-cagtgatcaatttggcacccaatggtgat |
247 |
Q |
| |
|
||||||||||| ||||||||||||| || ||||||||| || ||||||||| ||||||||||||||| ||||||||||| | || || || ||||| |
|
|
| T |
2334583 |
aaaaaccaccaacaccctcaaaatgctgaaacccctaacagtagctcctcaaagaaaccaacaccgccaatgagtgatcaattagacatccgatagtgat |
2334682 |
T |
|
| Q |
248 |
tttgcttcaagcgttcagcttcgaccaccactcaagttctggtctatcggaggagacatcacaacatcctaaaa |
321 |
Q |
| |
|
|||||| | || ||||||||||||||||||||||| ||| || ||||||||||||||||| ||||||| |
|
|
| T |
2334683 |
aatgcttccaacgcacagcttcgaccaccactcaagtttcggtaactc-gaggagacatcacaacagcctaaaa |
2334755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 577 - 697
Target Start/End: Complemental strand, 25341395 - 25341275
Alignment:
| Q |
577 |
acctgaatagaccaacacacaccccaaccctcggctaggcaagtacaaaccaccacgatccttacaacgacgaatgatccgggagttgcgaagaaggagg |
676 |
Q |
| |
|
||||||||||||| | |||||| ||||| |||||| ||| |||||| |||||||||||||| || ||||| ||||| | ||||||||||||||| |
|
|
| T |
25341395 |
acctgaatagaccggcccacaccacaaccaccggctaaacaaccacaaacaaccacgatccttacgaccacgaacgatccaaaaattgcgaagaaggagg |
25341296 |
T |
|
| Q |
677 |
tttaatcgtgaaggacctgca |
697 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
25341295 |
attaatcgtgaaggacctgca |
25341275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 843 - 889
Target Start/End: Complemental strand, 39368392 - 39368346
Alignment:
| Q |
843 |
gaaagtgaaccaccaaaaggttgagggagatctataaaacctcgacc |
889 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||| |||||||||||| |
|
|
| T |
39368392 |
gaaagtgaaccaccaaaaggctgaggaggatctagaaaacctcgacc |
39368346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 124; Significance: 3e-63; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 343 - 589
Target Start/End: Complemental strand, 2570208 - 2569962
Alignment:
| Q |
343 |
tcccgacctcgaatcaaaagcgatcatcccaa-agactcccgaaacaaggcaaaaaggcacctatcaactcacgaaccatcagaacaaacaccttaacct |
441 |
Q |
| |
|
|||||||||||||||||||||||| | |||| ||||||| || ||||| |||||||||||| ||||||||||| | | |||| |||||||||||| || |
|
|
| T |
2570208 |
tcccgacctcgaatcaaaagcgataagcccaccagactcctgacacaagtcaaaaaggcacccctcaactcacgagcaaccagagcaaacaccttaatct |
2570109 |
T |
|
| Q |
442 |
gtccaaaaactcgacccaccaataacccgatgccaaaattcaaagacagagaaaaggcggaacagtagcgcaaagcaaaccagctcaaacacaaacaaat |
541 |
Q |
| |
|
| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||| ||||||||| ||||| ||||||| |
|
|
| T |
2570108 |
gaccaaaacctcgacccaccaataacccgatgccaaaatccaaagacagagaaaaggcggatcagtagcacaaagcgaaccagctcgaacac-aacaaat |
2570010 |
T |
|
| Q |
542 |
caaaacaagccaccatatcaacctgcgtcaccaccacctgaatagacc |
589 |
Q |
| |
|
|| ||||| | |||| || ||| ||| ||||||||||||||||||||| |
|
|
| T |
2570009 |
cacaacaaactaccaaattaacttgcatcaccaccacctgaatagacc |
2569962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 150 - 401
Target Start/End: Complemental strand, 6003615 - 6003363
Alignment:
| Q |
150 |
aaaaaccaccagcaccctcaaaatgtcaaatcccctaacaacagttcctcaaagaaccaacaccgccaacagtgatcaatttggcacccaatggtgattt |
249 |
Q |
| |
|
|||||||||||||||||||| || | | || | ||||||||||| ||||||||||||||||||||||||||||||| || |||||| || |||| | |
|
|
| T |
6003615 |
aaaaaccaccagcaccctcacaaagccgaaactcctaacaacagctcctcaaagaaccaacaccgccaacagtgataaaaaaggcacctgatattgatgt |
6003516 |
T |
|
| Q |
250 |
tgcttcaagcgttcagcttcgaccaccactcaagttctggtctatcggaggagacatcacaacatcctaaaaggacctgagtcacaaacttgctcccgac |
349 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||| |||||| ||||| ||||| |
|
|
| T |
6003515 |
tgcttcaaacgttcagcttcgaccaccactcaagtttcagtctatcggaggcgacatcacaacagcctaaaaggacctgagacacaaatttgcttccgac |
6003416 |
T |
|
| Q |
350 |
ctcgaatcaaaagcgatcatccca-aagactcccgaaacaaggcaaaaaggca |
401 |
Q |
| |
|
|||||||||||||||||| |||| |||||||| || |||| |||||||||| |
|
|
| T |
6003415 |
ctcgaatcaaaagcgatcggcccataagactcctgacacaaatcaaaaaggca |
6003363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 154 - 298
Target Start/End: Complemental strand, 2570553 - 2570409
Alignment:
| Q |
154 |
accaccagcaccctcaaaatgtcaaatcccctaacaacagttcctcaaagaaccaacaccgccaacagtgatcaatttggcacccaatggtgattttgct |
253 |
Q |
| |
|
||||||||||||| ||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||| | ||||||||||| |
|
|
| T |
2570553 |
accaccagcacccccaaaatgctaaatctcctaacaacaacacctcaaagaaccaacaccgccaacagtgatcaaaaaggcacccgaaagtgattttgct |
2570454 |
T |
|
| Q |
254 |
tcaagcgttcagcttcgaccaccactcaagttctggtctatcgga |
298 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
2570453 |
tcaaaggttcagcttcgaccaccactcaagtgttggtatatcgga |
2570409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 315 - 462
Target Start/End: Original strand, 27993540 - 27993689
Alignment:
| Q |
315 |
cctaaaaggacctgagtcacaaa-cttgctcccgacctcgaatcaaaagcgatcatcccaa-agactcccgaaacaaggcaaaaaggcacctatcaactc |
412 |
Q |
| |
|
|||||||| ||||| |||| ||| || |||||||| ||||||||||||| |||| ||| |||||||||| |||| || |||| |||| ||||||| |
|
|
| T |
27993540 |
cctaaaagaacctgcgtcagaaaactagctcccgatctcgaatcaaaagtgatcggtccaccagactcccgacacaaatcataaagacacccctcaactc |
27993639 |
T |
|
| Q |
413 |
acgaaccatcagaacaaacaccttaacctgtccaaaaactcgacccacca |
462 |
Q |
| |
|
|||||||| |||| |||||||| |||||| |||||||||||| ||||||| |
|
|
| T |
27993640 |
acgaaccaccagagcaaacaccataacctatccaaaaactcggcccacca |
27993689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 315 - 549
Target Start/End: Original strand, 46262123 - 46262357
Alignment:
| Q |
315 |
cctaaaaggacctgagtcac-aaacttgctcccgacctcgaatcaaaagcgatcatcccaa-agactcccgaaacaaggcaaaaaggcacctatcaactc |
412 |
Q |
| |
|
|||||||| ||| |||||| ||||| |||||||| ||||||||||||| |||| |||| |||||||| | || | |||||||||||| ||||||| |
|
|
| T |
46262123 |
cctaaaagaaccagagtcaagaaactagctcccgatctcgaatcaaaagtgatcggcccaccagactcccaacaccaatcaaaaaggcacccctcaactc |
46262222 |
T |
|
| Q |
413 |
acgaaccatcagaacaaacaccttaacctgtccaaaaactcgacccaccaataacccgatgccaaaattcaaagacagagaaaaggcggaacagtagcgc |
512 |
Q |
| |
|
||||| || | || | ||||| ||| || |||||||||||| |||||||| | || ||||||||| | |||||||| || || ||||||||||| | |
|
|
| T |
46262223 |
acgaatcaccggagaagacaccataaactatccaaaaactcggcccaccaaaacccagatgccaaattgataagacaga--aacggtggaacagtagctc |
46262320 |
T |
|
| Q |
513 |
aaagcaaaccagctcaaacacaaacaaatcaaaacaa |
549 |
Q |
| |
|
||| | | |||||||||||| ||||||| |||||||| |
|
|
| T |
46262321 |
aaatcgatccagctcaaacaaaaacaaaccaaaacaa |
46262357 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 699 - 778
Target Start/End: Complemental strand, 2569900 - 2569821
Alignment:
| Q |
699 |
acctcgctctttcgagcaataacaaccaagcaaccaaaacctaaagcaagagcaggaggcctccagcggcatggctccga |
778 |
Q |
| |
|
|||| |||||||||||||| || | ||||| ||||||| | ||| ||||||||||||||||||||||||| |||||||| |
|
|
| T |
2569900 |
acctagctctttcgagcaacaatagccaagtaaccaaatcataatccaagagcaggaggcctccagcggcaaggctccga |
2569821 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 335 - 540
Target Start/End: Original strand, 35206718 - 35206921
Alignment:
| Q |
335 |
aaacttgctcccgacctcgaatcaaaagcgatcatcccaa-agactcccgaaacaaggcaaaaaggcacctatcaactcacgaaccatcagaacaaacac |
433 |
Q |
| |
|
||||| |||||||| |||| |||||||| |||| |||| |||||||| | |||| ||||||| ||| |||||||| || ||| |||| || |||| |
|
|
| T |
35206718 |
aaactagctcccgatctcggatcaaaagtgatcggcccaccagactcccaacacaaataaaaaagggacccctcaactcatgacccaccagagcagacac |
35206817 |
T |
|
| Q |
434 |
cttaacctgtccaaaaactcgacccaccaataacccgatgccaaaattcaaagacagagaaaaggcggaacagtagcgcaaagcaaaccagctcaaacac |
533 |
Q |
| |
|
|||||| |||||||| ||| |||||||||| ||| |||||||| | |||||||||||||||| |||||| || ||||| | | ||||||| |||| |
|
|
| T |
35206818 |
cttaacttgtccaaat--tcggcccaccaatatcccaatgccaaact-caaagacagagaaaagatggaacaacagtgcaaaccgatccagctcgaacaa |
35206914 |
T |
|
| Q |
534 |
aaacaaa |
540 |
Q |
| |
|
||||||| |
|
|
| T |
35206915 |
aaacaaa |
35206921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 623 - 697
Target Start/End: Original strand, 17803385 - 17803455
Alignment:
| Q |
623 |
aaaccaccacgatccttacaacgacgaatgatccgggagttgcgaagaaggaggtttaatcgtgaaggacctgca |
697 |
Q |
| |
|
||||||||||||||||||| ||||| || ||||||| |||||| |||||||| |||||||||||||| ||||| |
|
|
| T |
17803385 |
aaaccaccacgatccttacgacgac-aacgatccggaagttgc---gaaggaggattaatcgtgaaggaactgca |
17803455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 427 - 540
Target Start/End: Complemental strand, 25153193 - 25153081
Alignment:
| Q |
427 |
caaacaccttaacctgtccaaaaactcgacccaccaataacccgatgccaaaattcaaagacagagaaaaggcggaacagtagcgcaaagcaaaccagct |
526 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||| || | |||||| ||||||| | ||| |||| ||| ||||||| | || ||| |||||||| |
|
|
| T |
25153193 |
caaacaccttaacctgtccaaaaactcggaccaccattattcagatgcc-aaattcataaacatagaataggtggaacagcaacgtaaattgaaccagct |
25153095 |
T |
|
| Q |
527 |
caaacacaaacaaa |
540 |
Q |
| |
|
| |||| ||||||| |
|
|
| T |
25153094 |
cgaacataaacaaa |
25153081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 68; Significance: 7e-30; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 396 - 554
Target Start/End: Complemental strand, 12129212 - 12129057
Alignment:
| Q |
396 |
aaggcacctatcaactcacgaaccatcagaacaaacaccttaacctgtccaaaaactcgacccaccaataacccgatgccaaaattcaaagacagagaaa |
495 |
Q |
| |
|
|||||||| |||||||||||| ||| |||| | |||||| ||| |||||||| |||| ||||||| || |||||||||||| ||| ||||| |||||| |
|
|
| T |
12129212 |
aaggcacccatcaactcacgacccaccagagaagacacctaaacttgtccaaa--ctcggcccaccattatcccgatgccaaa-ttcgaagacggagaaa |
12129116 |
T |
|
| Q |
496 |
aggcggaacagtagcgcaaagcaaaccagctcaaacacaaacaaatcaaaacaagccac |
554 |
Q |
| |
|
||| |||||||| ||||||| ||||||||||| |||| ||||||||||||||||||||| |
|
|
| T |
12129115 |
aggtggaacagtggcgcaaatcaaaccagctcgaacaaaaacaaatcaaaacaagccac |
12129057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 393 - 548
Target Start/End: Original strand, 7546513 - 7546665
Alignment:
| Q |
393 |
aaaaaggcacctatcaactcacgaaccatcagaacaaacaccttaacctgtccaaaaactcgacccaccaataacccgatgccaaaattca-aagacaga |
491 |
Q |
| |
|
||||||||||| ||||||||||||||| |||| || ||||| |||||| ||||||||||||||||| ||| | || ||||| ||||||| ||||| | |
|
|
| T |
7546513 |
aaaaaggcacccctcaactcacgaaccaccagagcagacaccataacctatccaaaaactcgaccca-caaaacccatatgcc-aaattcataagac--a |
7546608 |
T |
|
| Q |
492 |
gaaaaggcggaacagtagcgcaaagcaaaccagctcaaacacaaacaaatcaaaaca |
548 |
Q |
| |
|
|||| || |||||| ||||||||| | | |||||||||||| ||||||| ||||||| |
|
|
| T |
7546609 |
gaaacggtggaacaatagcgcaaatcgatccagctcaaacagaaacaaaccaaaaca |
7546665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 621 - 691
Target Start/End: Complemental strand, 31303619 - 31303549
Alignment:
| Q |
621 |
acaaaccaccacgatccttacaacgacgaatgatccgggagttgcgaagaaggaggtttaatcgtgaagga |
691 |
Q |
| |
|
|||||||| || |||||||||||||||||| ||| || ||||||| |||||||| ||||||||| |||| |
|
|
| T |
31303619 |
acaaaccatcatgatccttacaacgacgaacgattcgaaagttgcgttgaaggaggattaatcgtggagga |
31303549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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