View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3447_low_28 (Length: 252)

Name: NF3447_low_28
Description: NF3447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3447_low_28
NF3447_low_28
[»] chr7 (51 HSPs)
chr7 (96-237)||(3531040-3531181)
chr7 (152-240)||(15994061-15994153)
chr7 (152-232)||(6854092-6854173)
chr7 (152-232)||(23653398-23653478)
chr7 (163-240)||(5800760-5800837)
chr7 (162-240)||(39151799-39151874)
chr7 (162-238)||(41383924-41384000)
chr7 (163-240)||(38175086-38175164)
chr7 (152-232)||(19371723-19371801)
chr7 (152-225)||(21028509-21028582)
chr7 (181-234)||(21080194-21080247)
chr7 (152-240)||(45000928-45001017)
chr7 (151-240)||(7415813-7415904)
chr7 (169-240)||(21766187-21766260)
chr7 (167-232)||(39389531-39389597)
chr7 (152-240)||(36251837-36251925)
chr7 (169-240)||(7629086-7629157)
chr7 (169-232)||(10199258-10199322)
chr7 (152-232)||(31283471-31283551)
chr7 (169-212)||(789161-789204)
chr7 (162-232)||(10040418-10040486)
chr7 (178-237)||(24060103-24060162)
chr7 (175-240)||(25750869-25750931)
chr7 (151-232)||(25834554-25834632)
chr7 (152-207)||(36609855-36609910)
chr7 (162-240)||(372650-372727)
chr7 (175-231)||(3433647-3433700)
chr7 (153-243)||(9412663-9412751)
chr7 (169-232)||(39434950-39435010)
chr7 (163-219)||(25489860-25489916)
chr7 (152-240)||(41556347-41556435)
chr7 (185-232)||(19397075-19397122)
chr7 (191-240)||(5757237-5757287)
chr7 (163-217)||(39434614-39434668)
chr7 (152-232)||(47297395-47297472)
chr7 (178-240)||(14624516-14624580)
chr7 (152-240)||(23050865-23050950)
chr7 (179-240)||(38192332-38192393)
chr7 (152-223)||(47901769-47901836)
chr7 (162-207)||(48103785-48103830)
chr7 (162-225)||(2475061-2475122)
chr7 (152-184)||(5318755-5318787)
chr7 (152-231)||(12170531-12170607)
chr7 (161-205)||(20034979-20035023)
chr7 (161-205)||(20045390-20045434)
chr7 (155-207)||(21094030-21094082)
chr7 (162-240)||(32883138-32883215)
chr7 (152-196)||(35446639-35446683)
chr7 (152-240)||(40355999-40356090)
chr7 (167-207)||(46622395-46622435)
chr7 (163-207)||(48525913-48525957)
[»] scaffold0287 (1 HSPs)
scaffold0287 (149-237)||(21985-22073)
[»] chr8 (36 HSPs)
chr8 (152-232)||(13765883-13765963)
chr8 (152-240)||(13755146-13755235)
chr8 (162-240)||(41666735-41666814)
chr8 (152-222)||(9694074-9694144)
chr8 (167-240)||(26536311-26536385)
chr8 (152-240)||(28205432-28205517)
chr8 (152-232)||(34966698-34966775)
chr8 (152-240)||(4535953-4536044)
chr8 (179-232)||(12542653-12542706)
chr8 (152-240)||(15919533-15919621)
chr8 (152-232)||(32856607-32856687)
chr8 (164-231)||(3369474-3369541)
chr8 (164-240)||(32173015-32173093)
chr8 (152-240)||(12191954-12192039)
chr8 (152-240)||(12436382-12436467)
chr8 (145-207)||(18638205-18638267)
chr8 (195-240)||(29039326-29039372)
chr8 (152-240)||(30264209-30264294)
chr8 (159-223)||(13170044-13170108)
chr8 (159-240)||(15226207-15226286)
chr8 (152-240)||(41942470-41942555)
chr8 (152-207)||(288768-288823)
chr8 (152-207)||(1554771-1554826)
chr8 (163-225)||(12838570-12838633)
chr8 (178-240)||(93056-93118)
chr8 (162-231)||(3739587-3739654)
chr8 (169-231)||(5182639-5182701)
chr8 (191-240)||(14876835-14876885)
chr8 (169-240)||(2692025-2692095)
chr8 (169-230)||(4418416-4418476)
chr8 (163-223)||(34180062-34180123)
chr8 (152-240)||(38498498-38498579)
chr8 (167-207)||(11352824-11352864)
chr8 (162-202)||(25722807-25722847)
chr8 (152-204)||(26784650-26784702)
chr8 (152-212)||(27020507-27020567)
[»] chr3 (63 HSPs)
chr3 (152-239)||(50098573-50098660)
chr3 (163-240)||(21495568-21495645)
chr3 (152-240)||(45644119-45644207)
chr3 (174-240)||(10438260-10438327)
chr3 (169-240)||(29535102-29535175)
chr3 (175-240)||(48795255-48795320)
chr3 (153-240)||(54982607-54982696)
chr3 (162-240)||(40360332-40360407)
chr3 (162-232)||(7791261-7791330)
chr3 (172-240)||(8757559-8757628)
chr3 (169-232)||(19224939-19225002)
chr3 (162-240)||(29542073-29542152)
chr3 (173-232)||(49429144-49429203)
chr3 (153-239)||(45885796-45885879)
chr3 (152-232)||(51006169-51006246)
chr3 (152-238)||(3418790-3418874)
chr3 (152-225)||(9862058-9862131)
chr3 (152-225)||(14418978-14419051)
chr3 (152-240)||(30102527-30102614)
chr3 (152-240)||(35380329-35380418)
chr3 (152-224)||(38809339-38809411)
chr3 (170-240)||(13875509-13875579)
chr3 (161-232)||(21789560-21789630)
chr3 (162-240)||(27398188-27398265)
chr3 (163-240)||(27400045-27400124)
chr3 (162-225)||(45879793-45879856)
chr3 (167-240)||(2513366-2513437)
chr3 (170-232)||(6834035-6834097)
chr3 (163-225)||(17438756-17438818)
chr3 (170-232)||(18020437-18020499)
chr3 (152-232)||(49429668-49429745)
chr3 (169-240)||(14265811-14265881)
chr3 (162-231)||(18956410-18956479)
chr3 (162-207)||(21030597-21030642)
chr3 (162-231)||(22130691-22130760)
chr3 (162-207)||(50099017-50099062)
chr3 (185-240)||(9151908-9151964)
chr3 (169-240)||(47787251-47787323)
chr3 (175-230)||(13043641-13043696)
chr3 (175-230)||(13051718-13051773)
chr3 (152-207)||(14899886-14899941)
chr3 (152-207)||(22102418-22102473)
chr3 (152-207)||(22177366-22177421)
chr3 (163-240)||(23251038-23251112)
chr3 (170-225)||(36920798-36920852)
chr3 (152-207)||(37431504-37431559)
chr3 (170-232)||(42401561-42401621)
chr3 (169-240)||(2363529-2363598)
chr3 (157-207)||(5812119-5812169)
chr3 (179-240)||(35379886-35379945)
chr3 (164-233)||(53162324-53162394)
chr3 (161-206)||(14266322-14266367)
chr3 (162-207)||(32509258-32509303)
chr3 (163-240)||(32560140-32560220)
chr3 (152-232)||(35938814-35938895)
chr3 (175-232)||(41923354-41923410)
chr3 (195-223)||(296306-296334)
chr3 (152-232)||(3890190-3890270)
chr3 (163-207)||(3899803-3899847)
chr3 (169-232)||(4577819-4577880)
chr3 (163-238)||(21595121-21595197)
chr3 (192-240)||(28309814-28309862)
chr3 (162-240)||(42896791-42896868)
[»] chr2 (49 HSPs)
chr2 (152-240)||(12069442-12069527)
chr2 (163-240)||(38702221-38702299)
chr2 (152-240)||(1071134-1071223)
chr2 (169-240)||(20579337-20579407)
chr2 (169-240)||(36205202-36205274)
chr2 (163-240)||(36080237-36080313)
chr2 (163-240)||(18072385-18072460)
chr2 (163-232)||(19063875-19063945)
chr2 (152-240)||(24100669-24100759)
chr2 (152-240)||(33676715-33676800)
chr2 (152-240)||(29241280-29241369)
chr2 (174-240)||(12069659-12069722)
chr2 (169-232)||(19064090-19064153)
chr2 (170-240)||(41122687-41122755)
chr2 (152-225)||(19813890-19813962)
chr2 (155-240)||(34063225-34063308)
chr2 (170-225)||(360348-360404)
chr2 (152-240)||(10553176-10553263)
chr2 (152-216)||(20625316-20625380)
chr2 (163-240)||(24004545-24004624)
chr2 (162-240)||(41384488-41384563)
chr2 (163-237)||(963248-963323)
chr2 (163-233)||(9415035-9415106)
chr2 (162-232)||(42949740-42949807)
chr2 (162-232)||(16039353-16039423)
chr2 (152-206)||(35125962-35126016)
chr2 (153-207)||(36341669-36341723)
chr2 (163-240)||(38692564-38692640)
chr2 (167-240)||(41014284-41014355)
chr2 (152-230)||(44857484-44857562)
chr2 (162-240)||(13450154-13450227)
chr2 (152-232)||(629614-629693)
chr2 (152-204)||(44020061-44020113)
chr2 (152-232)||(3357683-3357758)
chr2 (152-207)||(7603683-7603738)
chr2 (152-207)||(13836979-13837034)
chr2 (152-225)||(30977002-30977072)
chr2 (174-232)||(19133436-19133493)
chr2 (163-240)||(33134023-33134101)
chr2 (194-240)||(36802386-36802432)
chr2 (169-207)||(39271618-39271656)
chr2 (154-212)||(40301627-40301685)
chr2 (162-232)||(42185788-42185857)
chr2 (153-225)||(13594263-13594333)
chr2 (169-206)||(17372471-17372508)
chr2 (167-232)||(18746050-18746115)
chr2 (169-240)||(28146084-28146154)
chr2 (169-225)||(42060430-42060484)
chr2 (162-206)||(45407012-45407056)
[»] chr4 (47 HSPs)
chr4 (152-232)||(32006664-32006745)
chr4 (152-230)||(1397181-1397259)
chr4 (154-240)||(26088720-26088806)
chr4 (163-240)||(46620615-46620693)
chr4 (152-240)||(2133537-2133626)
chr4 (169-240)||(7059375-7059446)
chr4 (162-240)||(50561201-50561279)
chr4 (160-240)||(49319234-49319315)
chr4 (152-240)||(37013283-37013374)
chr4 (184-245)||(7396486-7396547)
chr4 (163-223)||(28494907-28494967)
chr4 (169-219)||(6488111-6488161)
chr4 (152-225)||(6196642-6196715)
chr4 (152-240)||(28808740-28808829)
chr4 (156-225)||(52954093-52954161)
chr4 (169-232)||(2548431-2548495)
chr4 (169-225)||(30503146-30503202)
chr4 (169-240)||(34409757-34409828)
chr4 (167-239)||(5881917-5881991)
chr4 (171-240)||(27376317-27376385)
chr4 (152-223)||(36802601-36802672)
chr4 (169-232)||(50821346-50821409)
chr4 (162-240)||(53451252-53451331)
chr4 (191-232)||(668262-668303)
chr4 (152-232)||(20702354-20702432)
chr4 (170-223)||(20818197-20818250)
chr4 (163-239)||(35034798-35034875)
chr4 (162-207)||(49574890-49574935)
chr4 (152-212)||(41169167-41169227)
chr4 (169-232)||(554717-554780)
chr4 (152-207)||(2358639-2358694)
chr4 (176-219)||(5101469-5101512)
chr4 (163-225)||(6386596-6386659)
chr4 (152-207)||(20702525-20702580)
chr4 (152-207)||(35447680-35447735)
chr4 (152-207)||(35595618-35595673)
chr4 (152-240)||(37143312-37143397)
chr4 (152-207)||(47931360-47931415)
chr4 (152-218)||(893897-893962)
chr4 (178-240)||(1363749-1363811)
chr4 (160-240)||(6788577-6788659)
chr4 (152-240)||(27088490-27088573)
chr4 (152-232)||(32023439-32023516)
chr4 (193-240)||(20964788-20964832)
chr4 (163-232)||(37143787-37143856)
chr4 (152-232)||(26510236-26510315)
chr4 (162-232)||(44182243-44182315)
[»] chr1 (59 HSPs)
chr1 (163-240)||(40808739-40808816)
chr1 (163-245)||(11408992-11409075)
chr1 (167-232)||(43415959-43416024)
chr1 (162-240)||(25298061-25298140)
chr1 (152-240)||(11344937-11345021)
chr1 (152-240)||(33474282-33474372)
chr1 (152-240)||(12267063-12267152)
chr1 (167-240)||(25822115-25822187)
chr1 (169-240)||(24561242-24561314)
chr1 (152-240)||(33326753-33326840)
chr1 (152-232)||(36605488-36605568)
chr1 (153-232)||(13315212-13315291)
chr1 (153-225)||(27927046-27927117)
chr1 (162-240)||(115864-115942)
chr1 (152-207)||(34969360-34969415)
chr1 (162-240)||(45943299-45943378)
chr1 (170-236)||(17579899-17579964)
chr1 (152-240)||(34748818-34748905)
chr1 (163-232)||(5965751-5965820)
chr1 (162-207)||(21335040-21335085)
chr1 (152-240)||(31845105-31845190)
chr1 (152-232)||(46880059-46880137)
chr1 (162-225)||(13303951-13304015)
chr1 (152-237)||(12301014-12301098)
chr1 (177-232)||(15470487-15470542)
chr1 (152-207)||(16424482-16424537)
chr1 (163-225)||(14386879-14386941)
chr1 (152-232)||(43575639-43575717)
chr1 (162-232)||(1531257-1531323)
chr1 (185-225)||(8209440-8209480)
chr1 (152-200)||(8574014-8574062)
chr1 (162-206)||(31528643-31528687)
chr1 (169-217)||(50943896-50943944)
chr1 (152-207)||(14746467-14746521)
chr1 (152-207)||(16823623-16823678)
chr1 (152-207)||(21343896-21343951)
chr1 (152-207)||(21348761-21348816)
chr1 (152-207)||(47576725-47576780)
chr1 (162-232)||(48715865-48715933)
chr1 (170-240)||(52397102-52397171)
chr1 (152-232)||(2666161-2666237)
chr1 (162-232)||(10844250-10844319)
chr1 (170-240)||(12780243-12780312)
chr1 (167-225)||(23773366-23773424)
chr1 (151-230)||(48668488-48668568)
chr1 (152-232)||(8096240-8096317)
chr1 (152-209)||(12264891-12264948)
chr1 (162-207)||(13315109-13315154)
chr1 (171-212)||(24005060-24005101)
chr1 (169-233)||(27904336-27904398)
chr1 (157-240)||(28041416-28041496)
chr1 (152-240)||(43723863-43723948)
chr1 (162-223)||(48419997-48420056)
chr1 (184-240)||(50944649-50944706)
chr1 (162-207)||(52043386-52043431)
chr1 (169-205)||(8699296-8699332)
chr1 (169-231)||(37706024-37706082)
chr1 (184-240)||(44667764-44667819)
chr1 (192-240)||(52402267-52402315)
[»] chr5 (47 HSPs)
chr5 (152-240)||(24836764-24836852)
chr5 (163-240)||(42207841-42207918)
chr5 (152-232)||(42918946-42919026)
chr5 (162-225)||(18526944-18527007)
chr5 (163-240)||(5769741-5769819)
chr5 (170-240)||(15341781-15341851)
chr5 (163-232)||(25781990-25782058)
chr5 (162-240)||(38696985-38697061)
chr5 (169-240)||(8990368-8990440)
chr5 (173-237)||(29403041-29403105)
chr5 (152-232)||(39850834-39850913)
chr5 (178-240)||(17704916-17704978)
chr5 (163-240)||(41862869-41862946)
chr5 (163-232)||(28340242-28340311)
chr5 (152-225)||(28766298-28766370)
chr5 (176-240)||(27832331-27832395)
chr5 (152-240)||(834185-834271)
chr5 (169-232)||(936139-936202)
chr5 (169-224)||(1611461-1611516)
chr5 (163-240)||(7649037-7649113)
chr5 (152-207)||(17210565-17210620)
chr5 (152-240)||(25754550-25754636)
chr5 (152-207)||(36226466-36226521)
chr5 (152-225)||(7464099-7464173)
chr5 (163-225)||(15232196-15232258)
chr5 (161-207)||(17064948-17064994)
chr5 (152-240)||(19128578-19128670)
chr5 (162-207)||(8786724-8786769)
chr5 (162-240)||(1611559-1611639)
chr5 (169-232)||(8839840-8839904)
chr5 (152-234)||(22702283-22702366)
chr5 (152-207)||(40493862-40493916)
chr5 (152-207)||(42516189-42516244)
chr5 (152-240)||(43370134-43370219)
chr5 (169-240)||(25793695-25793764)
chr5 (162-207)||(832191-832236)
chr5 (152-209)||(12659357-12659414)
chr5 (162-207)||(19650719-19650764)
chr5 (162-207)||(23206845-23206890)
chr5 (162-240)||(32234577-32234652)
chr5 (180-240)||(37896416-37896476)
chr5 (152-225)||(42027647-42027719)
chr5 (152-225)||(1611982-1612057)
chr5 (152-240)||(38180109-38180190)
chr5 (152-240)||(38190941-38191022)
chr5 (152-240)||(38207333-38207414)
chr5 (152-223)||(42097487-42097556)
[»] chr6 (29 HSPs)
chr6 (163-240)||(14662319-14662397)
chr6 (151-240)||(23124392-23124482)
chr6 (162-232)||(29350485-29350555)
chr6 (169-240)||(19146155-19146223)
chr6 (152-232)||(30591893-30591972)
chr6 (163-245)||(8771695-8771776)
chr6 (152-232)||(12169882-12169962)
chr6 (169-240)||(20715849-20715918)
chr6 (163-235)||(32333280-32333351)
chr6 (152-240)||(2485904-2485988)
chr6 (152-233)||(14426641-14426723)
chr6 (163-225)||(30233299-30233361)
chr6 (162-238)||(32531133-32531207)
chr6 (169-240)||(30254343-30254415)
chr6 (162-240)||(22535047-22535125)
chr6 (152-207)||(28712003-28712058)
chr6 (152-232)||(13629286-13629366)
chr6 (163-207)||(17353115-17353159)
chr6 (152-232)||(17942746-17942826)
chr6 (152-207)||(10460124-10460179)
chr6 (162-240)||(22535451-22535526)
chr6 (152-225)||(31861843-31861913)
chr6 (162-207)||(7451732-7451777)
chr6 (162-207)||(14965243-14965288)
chr6 (179-240)||(26251924-26251988)
chr6 (175-240)||(26306115-26306178)
chr6 (162-238)||(31204050-31204127)
chr6 (163-225)||(33573352-33573416)
chr6 (159-207)||(3833900-3833948)
[»] scaffold0024 (1 HSPs)
scaffold0024 (162-240)||(44259-44338)
[»] scaffold0830 (1 HSPs)
scaffold0830 (169-240)||(719-791)
[»] scaffold0734 (1 HSPs)
scaffold0734 (169-240)||(4025-4097)
[»] scaffold0268 (1 HSPs)
scaffold0268 (169-232)||(21608-21672)
[»] scaffold0649 (1 HSPs)
scaffold0649 (169-239)||(8419-8490)
[»] scaffold0037 (2 HSPs)
scaffold0037 (170-240)||(57109-57178)
scaffold0037 (170-240)||(64234-64303)
[»] scaffold0118 (1 HSPs)
scaffold0118 (169-230)||(14765-14825)
[»] scaffold0021 (1 HSPs)
scaffold0021 (152-240)||(3964-4053)
[»] scaffold0196 (1 HSPs)
scaffold0196 (162-240)||(8690-8765)
[»] scaffold0137 (1 HSPs)
scaffold0137 (163-232)||(6922-6988)
[»] scaffold0293 (1 HSPs)
scaffold0293 (170-240)||(4059-4127)
[»] scaffold0193 (1 HSPs)
scaffold0193 (164-240)||(21499-21577)
[»] scaffold0013 (1 HSPs)
scaffold0013 (169-240)||(41533-41602)
[»] scaffold0707 (1 HSPs)
scaffold0707 (163-225)||(376-440)
[»] scaffold0445 (1 HSPs)
scaffold0445 (162-207)||(4839-4884)


Alignment Details
Target: chr7 (Bit Score: 126; Significance: 4e-65; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 96 - 237
Target Start/End: Original strand, 3531040 - 3531181
Alignment:
Q  96 gtgtaacaaactcaatcttaatagaccaagatatatcaaaattttgttccttatttttatactctaaaacaaatttttctataataatgattgtcgttgg 195  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3531040 gtgtaacaaactcaatctttatagaccaagatatatcaaaattttgttccttatttttatactctgaaacaaatttttctataataatgattgtcgttgg 3531139  T
Q  196 tgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||||||||||||||||||||||||||| | |||||||||||    
T  3531140 tgtcattaaaaagataagaatttagatttttttttttgttat 3531181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 15994153 - 15994061
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtg---tcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    |||||||||||||||| |||| |||||||||||||||| |||||||   ||||||||||||||||||||||||||||  ||||||||||||||    
T  15994153 ttatactctaaaacaatttttcctataataatgattgttgttggtggtgtcattaaaaagataagaatttagattatatttttttgttatatt 15994061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 6854173 - 6854092
Alignment:
Q  152 ttatactctaaaacaaattttt-ctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||||||||||||| ||||| |||||||||||||||| |||||| | |||||||||||||||||||||||||| ||||||    
T  6854173 ttatactctaaaacaatttttttctataataatgattgttgttggtattattaaaaagataagaatttagattatatttttt 6854092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 23653398 - 23653478
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| ||||||| |  ||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||    
T  23653398 ttatagtctaaaatatttttttttataataatgattgttgttggtgtcattaaaaagataaaaatttagattatatttttt 23653478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 5800760 - 5800837
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||| |||||||||||||| ||| || | |||| |||||||||| ||||||||||||||||| ||||||||||||||    
T  5800760 aacaattttttctataataaagatcgttggtggtatcattaaaaaaataagaatttagattattttttttgttatatt 5800837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 39151799 - 39151874
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||| |||||||||||||| |||||| |||||||| ||||||||   ||||||||||||||| ||||||||||||||    
T  39151799 aaacaactttttctataataaagattgttgttggtgttattaaaaa---aagaatttagattatattttttgttatatt 39151874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 41384000 - 41383924
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttata 238  Q
    |||||| ||||| ||||||||||||||| |||| |||||||| ||||||||||||||||||||| || ||| |||||    
T  41384000 aaacaactttttatataataatgattgttgttgatgtcattacaaagataagaatttagattatattattttttata 41383924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 38175164 - 38175086
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcatt-aaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||| ||||||||||| |||||||||  ||||||||||| ||||| |||||||||||||||||  |||||||||||||    
T  38175164 aacaactttttctataacaatgattgttcttggtgtcattcaaaaaaataagaatttagattataatttttgttatatt 38175086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 19371723 - 19371801
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| |||||||||||||| |||||| ||||||||||||||||  | ||||||||||||||| ||||||    
T  19371723 ttatacccttaaacaactttttctataataaagattgttgttggtgtcattaaaa--aaaagaatttagattatatttttt 19371801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 21028582 - 21028509
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||||| ||| |||| |||||| |||| ||||||||| | ||||||||||||||||||||||||| |||||||    
T  21028582 ttatactttaagacaactttttcaataacaatgattgttgctggtgtcattaaaaagataagaattcagattat 21028509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 21080247 - 21080194
Alignment:
Q  181 aatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgt 234  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| || |||||    
T  21080247 aatgattgttgttggtgtcattaaaaagataagaatttagattatattgtttgt 21080194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 45001017 - 45000928
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    |||||| || |||||| |||||||||||||| |||||| |||| ||||| |||||| |||| ||||||||||||  ||||||||||||||    
T  45001017 ttatacccttaaacaactttttctataataaagattgttgttgatgtcaataaaaaaataaaaatttagattatatttttttgttatatt 45000928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 151 - 240
Target Start/End: Original strand, 7415813 - 7415904
Alignment:
Q  151 tttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaa-aagataagaatttagattat-cttttttgttatatt 240  Q
    ||||||| ||||||||| |||||||| ||||| |||||  ||||||||||||||| || ||||||||| |||||||  ||||||||||||||    
T  7415813 tttataccctaaaacaattttttctaaaataaagattgatgttggtgtcattaaacaaaataagaattcagattatatttttttgttatatt 7415904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 21766260 - 21766187
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatt--atcttttttgttatatt 240  Q
    ||||| |||||||| |||||| ||||||||||||| ||| |||||||||||||||  || ||||||||||||||    
T  21766260 tttttttataataaagattgttgttggtgtcattataaaaataagaatttagattagattttttttgttatatt 21766187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 39389531 - 39389597
Alignment:
Q  167 aatttttctataataatgattgtcgttggtgtcatt-aaaaagataagaatttagattatctttttt 232  Q
    |||||||||||||||| |||||| ||| |||||||| ||||| ||||||||||||||||| ||||||    
T  39389531 aatttttctataataaagattgttgtttgtgtcattaaaaaaaataagaatttagattatatttttt 39389597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 36251837 - 36251925
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcatt-aaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||||||||| ||| |||||||||||||| |||||| ||| |||| ||| ||||| |||| |||||||||||| |||||| |||||||    
T  36251837 ttatactctaaa-caattttttctataataaagattgttgtttgtgttattaaaaaaaataacaatttagattatattttttattatatt 36251925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 7629157 - 7629086
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaa-agataagaatttagattatcttttttgttatatt 240  Q
    |||||||||||||| |||||| |||||| | ||||||| | ||||||||||||||||| ||||||||||||||    
T  7629157 tttttctataataaagattgttgttggtattattaaaataaataagaatttagattat-ttttttgttatatt 7629086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 10199322 - 10199258
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcatt-aaaaagataagaatttagattatctttttt 232  Q
    |||||||||||||| |||||| ||||||||| || ||||| ||||||||||||||||| ||||||    
T  10199322 tttttctataataaagattgttgttggtgtcgttaaaaaaaataagaatttagattatatttttt 10199258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 31283551 - 31283471
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||| | |||||| |||||||||||||| |||||| |||||||||||||||||  ||  |||||||||| | ||||||    
T  31283551 ttatactattaaacaattttttctataataaagattgttgttggtgtcattaaaaaactacaaatttagattgtatttttt 31283471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 789204 - 789161
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataa 212  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||    
T  789204 tttttttataataatgattgttgttggtgtcattaaaaagataa 789161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 10040418 - 10040486
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| |||||||||||||| |||||| ||||| ||||||||||  | ||||||||||||||| ||||||    
T  10040418 aaacaattttttctataataaagattgttgttggcgtcattaaaa--aaaagaatttagattatatttttt 10040486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 237
Target Start/End: Complemental strand, 24060162 - 24060103
Alignment:
Q  178 aataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||||||||||| |||| |||||| ||||| ||||||||||| ||||| |||||||||||    
T  24060162 aataatgattgttgttgatgtcatcaaaaatataagaatttatattatattttttgttat 24060103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 25750869 - 25750931
Alignment:
Q  175 tataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||||| |||||| |||||||||||||||||   ||||||||||||||| ||||||||| ||||    
T  25750869 tataataaagattgttgttggtgtcattaaaaa---aagaatttagattatattttttgttttatt 25750931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 232
Target Start/End: Original strand, 25834554 - 25834632
Alignment:
Q  151 tttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||| || |||||| |||| ||||||||| |||||| |||| ||||||||||||   ||||||||||||||| ||||||    
T  25834554 tttatacccttaaacaatttttcctataataaagattgttgttgatgtcattaaaaa---aagaatttagattatatttttt 25834632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 36609910 - 36609855
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| |||||||||||||| |||||| |||||||||||||||||    
T  36609910 ttatacccttaaacaattttttctataataaagattgttgttggtgtcattaaaaa 36609855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 372650 - 372727
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||| |||||||||||| | |||||| |||| | |||||||||| | | ||||||||||||| ||||||||||||||    
T  372650 aaacaattttttctataatgaagattgttgttgatatcattaaaaaaa-atgaatttagattatattttttgttatatt 372727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 3433647 - 3433700
Alignment:
Q  175 tataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttt 231  Q
    |||||||||||||||   ||||||||||| ||||||||||||||||||||| |||||    
T  3433647 tataataatgattgt---tggtgtcattacaaagataagaatttagattatattttt 3433700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 9412663 - 9412751
Alignment:
Q  153 tatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatattctt 243  Q
    ||||| || |||||| |||||||||||||| |||||| ||| ||||| |||||||   |||||| ||||||||  |||||||||||||||||    
T  9412663 tatacccttaaacaattttttctataataaagattgttgttagtgtcgttaaaaa---aagaatatagattatatttttttgttatattctt 9412751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 232
Target Start/End: Original strand, 39434950 - 39435010
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| |||||||| |||||| |||||||||||||||||   ||||||||||||||| ||||||    
T  39434950 tttttttataataaagattgttgttggtgtcattaaaaa---aagaatttagattatatttttt 39435010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 25489860 - 25489916
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaattta 219  Q
    ||||| |||||||||| |||  ||||| ||||||||||||||||| |||||||||||    
T  25489860 aacaactttttctatagtaaatattgttgttggtgtcattaaaaaaataagaattta 25489916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 41556435 - 41556347
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||| || |||||| |||| |||| |||  |||||| |||| ||||||| || | | ||||||||||||||| ||||||||||||||    
T  41556435 ttataccctcaaacaatttttcctattatagagattgttgttgatgtcattcaagaaaaaagaatttagattatattttttgttatatt 41556347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 19397075 - 19397122
Alignment:
Q  185 attgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| ||||||| ||||||||| ||||||||||||||||| ||||||    
T  19397075 attgttgttggtgccattaaaaaaataagaatttagattatatttttt 19397122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 5757287 - 5757237
Alignment:
Q  191 gttggtgtcattaaaaagataagaatttagattatctttt-ttgttatatt 240  Q
    ||||||||||||||||| ||||||||||| ||||| |||| ||||||||||    
T  5757287 gttggtgtcattaaaaaaataagaatttaaattatattttgttgttatatt 5757237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 39434668 - 39434614
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatt 217  Q
    ||||| |||||| ||||||| |||||| ||| ||||||||||||| |||||||||    
T  39434668 aacaactttttcaataataacgattgttgttagtgtcattaaaaaaataagaatt 39434614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 47297395 - 47297472
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||| |||||| ||||| |||||||| |||| | |||| ||||||||||||   ||||||||| ||||| ||||||    
T  47297395 ttatactcttaaacaattttttttataataaagatttttgttgatgtcattaaaaa---aagaatttaaattatatttttt 47297472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 14624580 - 14624516
Alignment:
Q  178 aataatgattgtcgttggtgtcattaaaaagata--agaatttagattatcttttttgttatatt 240  Q
    ||||| |||||| |||| |||||||||||| | |  |||||||||||||| ||||||||||||||    
T  14624580 aataaagattgttgttgttgtcattaaaaataaattagaatttagattatattttttgttatatt 14624516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 23050865 - 23050950
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||| || |||||| | ||| |||||||| |||||| ||| ||||||||||||  | ||||||||||||| | ||||||||||||||    
T  23050865 ttatacccttaaacaactatttttataataaagattgttgtttgtgtcattaaaa--aaaagaatttagatt-ttttttttgttatatt 23050950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 38192393 - 38192332
Alignment:
Q  179 ataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||| |||||| |||| |||| |||||||||||| |||||| || || ||||||||||||||    
T  38192393 ataacgattgttgttgatgtcgttaaaaagataataatttatatgatattttttgttatatt 38192332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 47901769 - 47901836
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatt 223  Q
    |||||| || |||||| ||||| |||||||| |||||| |||||||||||||||||   |||||||||||||    
T  47901769 ttatacccttaaacaacttttt-tataataaagattgttgttggtgtcattaaaaa---aagaatttagatt 47901836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 48103830 - 48103785
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| |||||||||||||| |||||| ||| |||||||||||||    
T  48103830 aaacaactttttctataataaagattgttgttagtgtcattaaaaa 48103785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 2475122 - 2475061
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    |||||| |||||| ||||||| ||| || ||||||||||||||||  | |||||||||||||||    
T  2475122 aaacaattttttcaataataaagatcgttgttggtgtcattaaaa--aaaagaatttagattat 2475061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 184
Target Start/End: Original strand, 5318755 - 5318787
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatg 184  Q
    ||||||||| |||||||||||||||||||||||    
T  5318755 ttatactctgaaacaaatttttctataataatg 5318787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 231
Target Start/End: Original strand, 12170531 - 12170607
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttt 231  Q
    ||||||||| |||||| ||||||||||||||  ||||| |||||| || ||||||  | ||||||||||||||| |||||    
T  12170531 ttatactcttaaacaactttttctataataa-aattgttgttggtctcgttaaaa--aaaagaatttagattattttttt 12170607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 20034979 - 20035023
Alignment:
Q  161 aaaacaaatttttctataataatgattgtcgttggtgtcattaaa 205  Q
    ||||||| |||||||||||||| |||||| |||||| ||||||||    
T  20034979 aaaacaactttttctataataaagattgttgttggtttcattaaa 20035023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 20045390 - 20045434
Alignment:
Q  161 aaaacaaatttttctataataatgattgtcgttggtgtcattaaa 205  Q
    ||||||| |||||||||||||| |||||| |||||| ||||||||    
T  20045390 aaaacaactttttctataataaagattgttgttggtttcattaaa 20045434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 21094082 - 21094030
Alignment:
Q  155 tactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| |||||| ||||| |||||||| |||||| ||| |||||||||||||    
T  21094082 tactcttaaacaactttttttataataaagattgttgttcgtgtcattaaaaa 21094030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 32883138 - 32883215
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatct-tttttgttatatt 240  Q
    |||||| ||||||||||||||  |||||  ||| |||||||||||  ||||||||||| ||||| | |||||||||||||    
T  32883138 aaacaattttttctataataaatattgtttttgttgtcattaaaa--ataagaatttacattatatatttttgttatatt 32883215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 35446683 - 35446639
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggt 196  Q
    ||||||| | |||||| |||||||||||||| |||||||||||||    
T  35446683 ttatacttttaaacaattttttctataataaagattgtcgttggt 35446639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 40355999 - 40356090
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcatt--aaaaagataagaatttagattat-cttttttgttatatt 240  Q
    |||||| ||| || || ||||| | ||||||||||||| ||||||||||||  ||||| ||||||||| |||| ||  ||||||||||||||    
T  40355999 ttataccctagaataactttttttgtaataatgattgttgttggtgtcattaaaaaaaaataagaattaagataatatttttttgttatatt 40356090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 46622435 - 46622395
Alignment:
Q  167 aatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||||| ||||||| |||||| |||||||||||||||||    
T  46622435 aatttttcgataataaagattgttgttggtgtcattaaaaa 46622395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 48525913 - 48525957
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||| |||||||||||||| |||||| ||||||||| |||||||    
T  48525913 aacaattttttctataataaagattgttgttggtgtcgttaaaaa 48525957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 21985 - 22073
Alignment:
Q  149 tttttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  21985 tttttatactctgaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatttttttttttgttat 22073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 13765883 - 13765963
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||    
T  13765883 ttatactctaaaacaattttttctataataatgattgttattggtgtcattaaaaagataagaatttagattatatttttt 13765963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 13755146 - 13755235
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttaga-ttatcttttttgttatatt 240  Q
    |||||||| ||||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||||||| || | ||||||||||||||    
T  13755146 ttatactccaaaacaactttttcaataataatgattgttgtttgtgtcattaaaaagataagaatttagattttttttttttgttatatt 13755235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 41666814 - 41666735
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    |||||| |||||||||||| | |||||| ||||||||||||||||| || |||||||| |||||  ||||||||||||||    
T  41666814 aaacaattttttctataattaagattgttgttggtgtcattaaaaaaattagaatttaaattatatttttttgttatatt 41666735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 222
Target Start/End: Complemental strand, 9694144 - 9694074
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagat 222  Q
    ||||| ||| |||||| ||||||||||||||||||||| | || || ||||| ||||||||||||||||||    
T  9694144 ttatattcttaaacaactttttctataataatgattgttgatgatgacattacaaagataagaatttagat 9694074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 26536385 - 26536311
Alignment:
Q  167 aatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    |||||||||||||||| |||||| ||||||||||||||||| |||| || |||| ||||  ||||||||||||||    
T  26536385 aatttttctataataaagattgttgttggtgtcattaaaaaaataacaacttagtttatatttttttgttatatt 26536311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 28205432 - 28205517
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||||| ||||||||  ||||||||||||| |||||| |||| ||||||||||||   |||||||| |||| | ||||||||||||||    
T  28205432 ttatactttaaaacaatattttctataataaagattgttgttgatgtcattaaaaa---aagaatttggatttttttttttgttatatt 28205517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 34966698 - 34966775
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| |||||||||||||| |||| | |||||||||||||||||   ||||||||||||||| ||||||    
T  34966698 ttatacccttaaacaactttttctataataaagatttttgttggtgtcattaaaaa---aagaatttagattatatttttt 34966775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 4535953 - 4536044
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagat---tatcttttttgttatatt 240  Q
    |||||| || |||||| ||||||||| ||||  ||||| || |||||||||||||| ||||||||||||||   ||| ||||||||||||||    
T  4535953 ttatacccttaaacaactttttctatgataaaaattgttgtcggtgtcattaaaaaaataagaatttagatatatatattttttgttatatt 4536044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 12542706 - 12542653
Alignment:
Q  179 ataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||||| |||| |||||||| ||||||||||||||||||||| ||||||    
T  12542706 ataatgattgttgttgatgtcattacaaagataagaatttagattatatttttt 12542653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 15919621 - 15919533
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    |||||| || |||||| ||| |||||||||| || ||| ||||||||||||||||| | |||||||||||||||  ||||||||||||||    
T  15919621 ttatacccttaaacaactttctctataataaagaatgttgttggtgtcattaaaaa-aaaagaatttagattatatttttttgttatatt 15919533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 32856687 - 32856607
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| |||||||||||||| |||||| | |||||| | |||||| ||||||||||||||| | ||||||    
T  32856687 ttatacccttaaacaactttttctataataaagattgttgatggtgttaataaaaaaataagaatttagattttatttttt 32856607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 3369541 - 3369474
Alignment:
Q  164 acaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttt 231  Q
    |||| |||||||||||||| |||||| |||| ||| |||| ||| ||||||||||||||||| |||||    
T  3369541 acaactttttctataataaagattgttgttgttgttattataaaaataagaatttagattatattttt 3369474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 240
Target Start/End: Original strand, 32173015 - 32173093
Alignment:
Q  164 acaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttt--tttgttatatt 240  Q
    |||| |||||||||||||| ||| || ||||| ||||||||||| || |||||||||||||| |||  |||||||||||    
T  32173015 acaattttttctataataaagatcgttgttggcgtcattaaaaaaattagaatttagattatattttatttgttatatt 32173093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 12192039 - 12191954
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||| || |||||| ||||| |||||||| |||||| |||| |||||| ||||| |   ||||||||||||| ||||||||||||||    
T  12192039 ttatacccttaaacaattttttttataataaggattgttgttgatgtcatcaaaaata---gaatttagattatattttttgttatatt 12191954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 12436467 - 12436382
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||| || |||||| ||||| |||||||| |||||| |||| |||||| ||||| |   ||||||||||||| ||||||||||||||    
T  12436467 ttatacccttaaacaattttttttataataaggattgttgttgatgtcatcaaaaata---gaatttagattatattttttgttatatt 12436382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 207
Target Start/End: Original strand, 18638205 - 18638267
Alignment:
Q  145 cttatttttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||| |||||||| || |||||| |||||||||||||| |||||| |||| ||||||||||||    
T  18638205 cttagttttatacccttaaacaattttttctataataaagattgttgttgatgtcattaaaaa 18638267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 240
Target Start/End: Complemental strand, 29039372 - 29039326
Alignment:
Q  195 gtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||    
T  29039372 gtgtcattaaaaaaataagaatttagattatacttttttgttatatt 29039326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 30264294 - 30264209
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||||||| |||||| ||||| ||||| || |||||| || |||||||||||||| ||  ||||||||||||| | ||||||||||||    
T  30264294 ttatactcttaaacaactttttatataaaaaagattgttgtcggtgtcattaaaaaaat--gaatttagattat-tattttgttatatt 30264209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 13170044 - 13170108
Alignment:
Q  159 ctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatt 223  Q
    ||||||||| ||||||| ||||||||| ||| ||| ||||  ||||||| |||||||||||||||    
T  13170044 ctaaaacaactttttctttaataatgactgttgtttgtgttgttaaaaatataagaatttagatt 13170108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 15226286 - 15226207
Alignment:
Q  159 ctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    ||||||||| |||||||||||||   ||||| |||||| ||| |||||||||| ||||||| |||||  ||||||||||||||    
T  15226286 ctaaaacaactttttctataata---attgttgttggtctcaataaaaagatatgaatttatattatatttttttgttatatt 15226207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 41942555 - 41942470
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    |||||| || |||||| |||||||||||||| |||||| || |||||||||||||| ||    |||||||||||  ||||||||||||||    
T  41942555 ttatacccttaaacaactttttctataataaagattgttgtgggtgtcattaaaaaaat----atttagattatatttttttgttatatt 41942470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 288768 - 288823
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||||||| ||| || |||||||||||||| |||||| || ||||||||||||||    
T  288768 ttatactcttaaaaaactttttctataataaagattgttgtcggtgtcattaaaaa 288823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 1554771 - 1554826
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || ||| || |||||||||||||| |||||| |||||||||||||||||    
T  1554771 ttatacccttaaataactttttctataataaagattgttgttggtgtcattaaaaa 1554826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 12838570 - 12838633
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaa-aaagataagaatttagattat 225  Q
    ||||| |||||||||||||| |||||| ||||| |||||||| |||  ||||||||||||||||    
T  12838570 aacaactttttctataataaagattgttgttggcgtcattaataaaagtaagaatttagattat 12838633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 93118 - 93056
Alignment:
Q  178 aataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||| ||||||  |||||||||||||||  || |||||||||||||| |||||| |||||||    
T  93118 aataaagattgtttttggtgtcattaaaacaattagaatttagattatattttttattatatt 93056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 3739587 - 3739654
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttt 231  Q
    |||||| |||||||||||||| | |||| ||||||||||||||||| ||  ||||||| ||||| |||||    
T  3739587 aaacaactttttctataataaaggttgttgttggtgtcattaaaaaaat--gaatttaaattatattttt 3739654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 5182701 - 5182639
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttt 231  Q
    |||||||||||||| |||| | ||||||||||||||||| | |||||||| ||| || |||||    
T  5182701 tttttctataataaagattattgttggtgtcattaaaaacaaaagaatttcgataatattttt 5182639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 14876885 - 14876835
Alignment:
Q  191 gttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    |||||||||||||||||||||| |||||  ||||| |||||||||||||||    
T  14876885 gttggtgtcattaaaaagataacaatttttattatacttttttgttatatt 14876835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 2692095 - 2692025
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    ||||| |||||||| |||||| |||||||||||| |||  |||| |||||||||||| |||||||||| ||||    
T  2692095 tttttttataataaagattgttgttggtgtcattcaaa--ataataatttagattatacttttttgttgtatt 2692025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 4418416 - 4418476
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttt 230  Q
    |||||||||||||| |||||| |||| |||||||||||| | || |||||||||||| ||||    
T  4418416 tttttctataataaagattgttgttgatgtcattaaaaa-agaaaaatttagattatatttt 4418476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 34180062 - 34180123
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcatt-aaaaagataagaatttagatt 223  Q
    ||||| |||||||||||||| |||||| ||| |||| ||| ||||| |||||||||||||||    
T  34180062 aacaactttttctataataaagattgttgttagtgttattaaaaaaaataagaatttagatt 34180123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 38498498 - 38498579
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||| || |||||| |||||||| ||||| |||||| |||||||||||||| |    |||||||||||||   ||||||||||||||    
T  38498498 ttatacccttaaacaactttttctacaataaagattgttgttggtgtcattaaga----aagaatttagatt---ttttttgttatatt 38498579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 11352824 - 11352864
Alignment:
Q  167 aatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||||||||||| ||||||||| |||||| ||||||||||    
T  11352824 aatttttctataacaatgattgttgttggtttcattaaaaa 11352864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 25722807 - 25722847
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcatt 202  Q
    |||||| |||||||||||||| |||||| ||||||||||||    
T  25722807 aaacaactttttctataataaagattgttgttggtgtcatt 25722847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 26784650 - 26784702
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaa 204  Q
    |||||| || |||||| |||||||||||||| |||||| || |||||||||||    
T  26784650 ttatacccttaaacaactttttctataataaagattgttgtcggtgtcattaa 26784702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 27020567 - 27020507
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataa 212  Q
    |||||| || |||||| |||||||| ||||| ||| || ||||||||||||||||| ||||    
T  27020567 ttatacccttaaacaactttttctacaataaagatcgttgttggtgtcattaaaaaaataa 27020507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 239
Target Start/End: Complemental strand, 50098660 - 50098573
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatat 239  Q
    ||||||| |||||||| |||||||||||||||||||||||||| ||||  |||||||||||||||||||||||| || ||| ||||||    
T  50098660 ttatactttaaaacaattttttctataataatgattgtcgttgatgtcgctaaaaagataagaatttagattatattcttttttatat 50098573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 21495568 - 21495645
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||| |||||||||||||| |||||| |||||||||| |||| | ||||||||||||||||| ||||||||||||||    
T  21495568 aacaactttttctataataaagattgttgttggtgtcagtaaacaaataagaatttagattatattttttgttatatt 21495645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 45644119 - 45644207
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttt-ttgttatatt 240  Q
    |||||| || |||||| |||||||||||||| |||||||||||||||||||||||| |||| |||||||||||| |||| ||||||||||    
T  45644119 ttatacccttaaacaactttttctataataaagattgtcgttggtgtcattaaaaa-ataataatttagattatattttattgttatatt 45644207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 10438260 - 10438327
Alignment:
Q  174 ctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt-gttatatt 240  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||| ||||||||    
T  10438260 ctataataatgattgttgttggtgtcattaaaaagataagaatttatattatattttttcgttatatt 10438327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 29535102 - 29535175
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagat--tatcttttttgttatatt 240  Q
    ||||||||| ||||||||||| |||| |||||||||||||||||||||||||||  ||| ||||||||||||||    
T  29535102 tttttctatgataatgattgttgttgatgtcattaaaaagataagaatttagattatatattttttgttatatt 29535175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 48795255 - 48795320
Alignment:
Q  175 tataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||| |||||||    
T  48795255 tataataatgattgttgttgatgtcattaaaaagataagaatttatattatattttttattatatt 48795320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 240
Target Start/End: Original strand, 54982607 - 54982696
Alignment:
Q  153 tatactctaaaacaaatttttct-ataataatgattgtcgttggtgtcattaaaaagataagaatttagattatct-tttttgttatatt 240  Q
    |||||||||||| || ||||| | |||||||||||||| ||||||||||||||||||||| ||||||| ||||| | |||||||||||||    
T  54982607 tatactctaaaataatttttttttataataatgattgttgttggtgtcattaaaaagataggaatttaaattatatgtttttgttatatt 54982696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 40360332 - 40360407
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||| |||||||||||||| |||||| |||||||||||||||||   ||||||||||||||| |||||| |||||||    
T  40360332 aaacaattttttctataataaagattgttgttggtgtcattaaaaa---aagaatttagattatatttttttttatatt 40360407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 7791330 - 7791261
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| ||||||||||||||  ||||| ||||||||||||||||| ||||||||||||||||| ||||||    
T  7791330 aaacaattttttctataataaatattgttgttggtgtcattaaaaa-ataagaatttagattatatttttt 7791261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 172 - 240
Target Start/End: Complemental strand, 8757628 - 8757559
Alignment:
Q  172 ttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt-gttatatt 240  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||| ||||  |||||| ||||||||    
T  8757628 ttctataaaaataattgtcgttggtgtcattaaaaagataagaatttaaattagattttttcgttatatt 8757559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 169 - 232
Target Start/End: Original strand, 19224939 - 19225002
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||||||||||||| ||||| |||||||| |||| || |||||||||||||| ||||||    
T  19224939 tttttctataataatgattatcgttagtgtcattgaaaaaattagaatttagattatatttttt 19225002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 29542152 - 29542073
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    |||||| |||||||||||||| |||||| |||  |||||||||||| ||||||||||| |||||  ||||||||||||||    
T  29542152 aaacaactttttctataataaagattgttgtttatgtcattaaaaaaataagaatttatattatatttttttgttatatt 29542073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 49429203 - 49429144
Alignment:
Q  173 tctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||||||| |||||| |||||||||||||||||  |||||||||||||||| ||||||    
T  49429203 tctataataaagattgttgttggtgtcattaaaaaattaagaatttagattatatttttt 49429144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 45885796 - 45885879
Alignment:
Q  153 tatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttt-tttgttatat 239  Q
    ||||| || |||||| |||||||||||||| |||||| ||||||||||||||||    ||||||||||||||| ||| ||||||||||    
T  45885796 tatacccttaaacaattttttctataataaagattgttgttggtgtcattaaaa----aagaatttagattatatttatttgttatat 45885879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 51006169 - 51006246
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||| ||| || |||||||||||||| |||||| ||||||||| |||||||   ||||||||||||||| ||||||    
T  51006169 ttatactcttaaataattttttctataataaagattgttgttggtgtcgttaaaaa---aagaatttagattatatttttt 51006246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 3418790 - 3418874
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctt-ttttgttata 238  Q
    |||||| || |||||| |||||||||||||| |||||| |||||| ||||||||||   ||||||||||||||| || ||||||||||    
T  3418790 ttatacccttaaacaactttttctataataaagattgttgttggtatcattaaaaa---aagaatttagattatattcttttgttata 3418874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 9862058 - 9862131
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    |||||||||||||||| ||||||||| | |||| |||| ||||  |||| ||||| ||||||||||||||||||    
T  9862058 ttatactctaaaacaactttttctattacaatggttgttgttgtcgtcactaaaatgataagaatttagattat 9862131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 14418978 - 14419051
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    |||||| || |||||| |||||||||||||| |||||| |||| |||||||||||| |||| |||||| |||||    
T  14418978 ttatacccttaaacaattttttctataataaagattgttgttgatgtcattaaaaaaataaaaatttatattat 14419051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 30102614 - 30102527
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatct--tttttgttatatt 240  Q
    |||||| || |||||| |||||||||||||| ||| || |||||||||||||||||   ||||||||||||||| |  |||||||||||||    
T  30102614 ttatacccttaaacaactttttctataataaagatcgttgttggtgtcattaaaaa---aagaatttagattatattctttttgttatatt 30102527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 35380329 - 35380418
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    |||||| || |||||| |||||||||| ||| |||||| ||| ||||||||||||| || |||||| |||||||  ||||||||||||||    
T  35380329 ttatacccttaaacaattttttctatagtaaagattgttgttagtgtcattaaaaaaattagaattaagattatatttttttgttatatt 35380418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 38809411 - 38809339
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatta 224  Q
    |||||| || |||||| |||||| ||||||| |||||| ||| |||||||| |||| ||||||||||||||||    
T  38809411 ttatacccttaaacaactttttcaataataaagattgttgtttgtgtcatttaaaaaataagaatttagatta 38809339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 13875509 - 13875579
Alignment:
Q  170 ttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    |||||||||||||  ||||| ||||||||||||||||| | |||||||||||||||  ||||||||||||||    
T  13875509 ttttctataataaa-attgttgttggtgtcattaaaaaaaaaagaatttagattatatttttttgttatatt 13875579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 21789630 - 21789560
Alignment:
Q  161 aaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||| || ||||||||||| |||| | ||||||||||||||||| ||||||||||||||| | ||||||    
T  21789630 aaaacaacttattctataataaagatttttgttggtgtcattaaaaa-ataagaatttagattttttttttt 21789560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 27398188 - 27398265
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcatt-aaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||||||||||||||||||  |||||  ||||||||||| ||||| ||||||||||||||| | ||||||||||||||    
T  27398188 aaacaaatttttctataataa-cattgttattggtgtcattaaaaaaaataagaatttagatt-ttttttttgttatatt 27398265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 27400124 - 27400045
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaa-aagataagaatttagattat-cttttttgttatatt 240  Q
    ||||| ||||||||| |||| || ||| ||||||||||||||| || |||||||||||||||||  ||||||||||||||    
T  27400124 aacaactttttctatcataaagaatgttgttggtgtcattaaataaaataagaatttagattatatttttttgttatatt 27400045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 45879793 - 45879856
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    |||||| ||||||||||||||  |||||  |||||||||||||||| | |||||||||||||||    
T  45879793 aaacaactttttctataataaaaattgttattggtgtcattaaaaaaaaaagaatttagattat 45879856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 2513437 - 2513366
Alignment:
Q  167 aatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||||||||||||||||||||| |||  | |||||| |||||||||||||||||| || | |||| |||||||    
T  2513437 aatttttctataataatgattgttgtt--tatcattacaaagataagaatttagataatatattttattatatt 2513366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 6834035 - 6834097
Alignment:
Q  170 ttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| |||||||||||||| |||| ||| |||||||| |||||| |||||||||| ||||||    
T  6834035 ttttcaataataatgattgttgttgttgttattaaaaaaataagagtttagattatatttttt 6834097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 17438818 - 17438756
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||| ||||| | |||||| ||||||  |||||||||||||||||||| |||||||||||||    
T  17438818 aacaactttttttctaataaagattgttattggtgtcattaaaaagataggaatttagattat 17438756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 18020437 - 18020499
Alignment:
Q  170 ttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| ||||||| |||||||||| | ||||||||||| |||||||||| |||||| ||||||    
T  18020437 ttttccataataaagattgtcgttagggtcattaaaaaaataagaatttggattatatttttt 18020499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 49429745 - 49429668
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| |||||||||||||| ||||||   ||||||||||||||| |  |||||||||||||| ||||||    
T  49429745 ttatacccttaaacaactttttctataataaagattgt---tggtgtcattaaaaaaaatagaatttagattatatttttt 49429668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 14265811 - 14265881
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatct-tttttgttatatt 240  Q
    |||||||||||||| |||||| |||| |||||||||||  | ||||||||||||||| | |||||||||||||    
T  14265811 tttttctataataaagattgttgttgatgtcattaaaa--aaaagaatttagattatatatttttgttatatt 14265881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 18956410 - 18956479
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttt 231  Q
    |||||| |||||||||| || ||||||| ||||  ||||||| ||||||||| ||||||||||| |||||    
T  18956410 aaacaactttttctatagtagtgattgttgttgaggtcattacaaagataaggatttagattatattttt 18956479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 21030642 - 21030597
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| |||||||||||||| |||||| |||||||||||||||||    
T  21030642 aaacaactttttctataataaagattgttgttggtgtcattaaaaa 21030597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 22130760 - 22130691
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttt 231  Q
    |||||| |||||||||| |||| ||| | |||| |||||||| ||||||||| ||||||||||| |||||    
T  22130760 aaacaactttttctatagtaattatttttgttgatgtcattacaaagataaggatttagattatattttt 22130691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 50099017 - 50099062
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| |||||||||||||| |||||| |||||||||||||||||    
T  50099017 aaacaactttttctataataaagattgttgttggtgtcattaaaaa 50099062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 240
Target Start/End: Complemental strand, 9151964 - 9151908
Alignment:
Q  185 attgtcgttggtgtcattaaaaagataagaatttagattatctttttt-gttatatt 240  Q
    ||||| ||||||||||||||||| |||| |||||||||||| |||||| ||||||||    
T  9151964 attgttgttggtgtcattaaaaaaataaaaatttagattatattttttagttatatt 9151908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 47787323 - 47787251
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttt-ttgttatatt 240  Q
    ||||||||||||||  ||||| |||| |||||||||||| || | |||||||||||| |||| ||||||||||    
T  47787323 tttttctataataaatattgttgttgatgtcattaaaaaaattaaaatttagattatattttcttgttatatt 47787251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 13043696 - 13043641
Alignment:
Q  175 tataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttt 230  Q
    |||||||| |||| | |||||||||||| |||| ||||||||||||||||| ||||    
T  13043696 tataataaagatttttgttggtgtcatttaaaaaataagaatttagattatatttt 13043641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 13051773 - 13051718
Alignment:
Q  175 tataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttt 230  Q
    |||||||| |||| | |||||||||||| |||| ||||||||||||||||| ||||    
T  13051773 tataataaagatttttgttggtgtcatttaaaaaataagaatttagattatatttt 13051718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 14899886 - 14899941
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| ||||| |||||||| |||||| |||||||||||||||||    
T  14899886 ttatacccttaaacaactttttatataataaagattgttgttggtgtcattaaaaa 14899941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 22102418 - 22102473
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| |||||| ||||||| |||||| |||||||||||||||||    
T  22102418 ttatacccttaaacaactttttccataataaagattgttgttggtgtcattaaaaa 22102473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 22177366 - 22177421
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| |||||| ||||||| |||||| |||||||||||||||||    
T  22177366 ttatacccttaaacaactttttccataataaagattgttgttggtgtcattaaaaa 22177421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 23251112 - 23251038
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||| |||||||||||||| |||| | ||| || ||||| |||| |||||||||||||||   ||||||||||||||    
T  23251112 aacaattttttctataataaagattattgttagtatcattcaaaaaataagaatttagatt---ttttttgttatatt 23251038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 36920798 - 36920852
Alignment:
Q  170 ttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||||||||||| ||||||  |||||||||||||||| |||||||| ||||||||    
T  36920798 ttttctataataaagattgtt-ttggtgtcattaaaaaaataagaatgtagattat 36920852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 37431504 - 37431559
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||||||  |||||| |||||||||||||| |||||  |||||||||||||||||    
T  37431504 ttatactcataaacaactttttctataataaagattgatgttggtgtcattaaaaa 37431559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 42401621 - 42401561
Alignment:
Q  170 ttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||||||||||||||||| ||||||||| ||||||  | ||||||||| ||||| ||||||    
T  42401621 ttttctataataatgattgttgttggtgtcgttaaaa--aaaagaatttatattatatttttt 42401561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 2363598 - 2363529
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    ||||| |||||||| |||||| |||||||||||||||||   ||||||||| ||||| ||||||| |||||||    
T  2363598 tttttttataataaagattgttgttggtgtcattaaaaa---aagaatttaaattatacttttttattatatt 2363529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 5812169 - 5812119
Alignment:
Q  157 ctctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||| |||||| |||||||||||||| ||| || |||||||||||||||||    
T  5812169 ctcttaaacaactttttctataataaagatcgttgttggtgtcattaaaaa 5812119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 240
Target Start/End: Original strand, 35379886 - 35379945
Alignment:
Q  179 ataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||| |||||| ||||||||||||||||| |   ||||||||||||| ||||||||||||||    
T  35379886 ataaagattgttgttggtgtcattaaaaaaag--gaatttagattatattttttgttatatt 35379945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 53162394 - 53162324
Alignment:
Q  164 acaaatttttctataataatgattgtcgttggtgtcatta-aaaagataagaatttagattatcttttttg 233  Q
    |||| |||||||||||| | |||||| ||||||||||||| ||||  |||||||||||| ||| |||||||    
T  53162394 acaactttttctataattaagattgttgttggtgtcattagaaaaagtaagaatttagaatatattttttg 53162324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 14266322 - 14266367
Alignment:
Q  161 aaaacaaatttttctataataatgattgtcgttggtgtcattaaaa 206  Q
    ||||||||||||||||||||||  ||||| | ||||||||||||||    
T  14266322 aaaacaaatttttctataataaaaattgttgctggtgtcattaaaa 14266367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 32509258 - 32509303
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||||||||||||||||||| |||||| ||  |||||||||||||    
T  32509258 aaacaaatttttctataataaagattgttgtgtgtgtcattaaaaa 32509303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 32560140 - 32560220
Alignment:
Q  163 aacaaatttt-tctataataatgattgtcgttggtgtcattaaaaagataagaatttagat--tatcttttttgttatatt 240  Q
    |||||||||| ||||||||||  ||||| |||||| ||||| |||| ||||||||||| ||  ||| ||||||||||||||    
T  32560140 aacaaattttctctataataaaaattgttgttggtatcattcaaaaaataagaatttaaattatatattttttgttatatt 32560220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 35938814 - 35938895
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaaga-taagaatttagattatctttttt 232  Q
    |||||| || |||||| ||||| |||||||| |||||| |||||  |||||||||| | ||||||||||||| || ||||||    
T  35938814 ttatacccttaaacaactttttatataataaagattgttgttggaatcattaaaaaaaataagaatttagataatatttttt 35938895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 41923354 - 41923410
Alignment:
Q  175 tataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||  ||||| ||||||||||||||||| | ||||||||||||||| ||||||    
T  41923354 tataataaaaattgttgttggtgtcattaaaaa-aaaagaatttagattatatttttt 41923410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 223
Target Start/End: Original strand, 296306 - 296334
Alignment:
Q  195 gtgtcattaaaaagataagaatttagatt 223  Q
    |||||||||||||||||||||||||||||    
T  296306 gtgtcattaaaaagataagaatttagatt 296334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 3890270 - 3890190
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| |||||||| ||||| |||||| |||||| ||||| |||| | |  |||||||||||| ||||||    
T  3890270 ttatacccttaaacaactttttctacaataaagattgttgttggtttcattgaaaaaaaacaaatttagattatatttttt 3890190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 207
Target Start/End: Complemental strand, 3899847 - 3899803
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||| |||||||||||||| |||||| |||| ||||||||||||    
T  3899847 aacaattttttctataataaagattgttgttgatgtcattaaaaa 3899803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 4577880 - 4577819
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||||||||||| |||||| |||||||||||| |||  | ||||||||| ||||| ||||||    
T  4577880 tttttctataataaagattgttgttggtgtcatttaaa--aaaagaatttatattatatttttt 4577819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 21595197 - 21595121
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatct-tttttgttata 238  Q
    ||||| ||||||| ||||||  ||||| |||| |||||||||||  |||| |||||||||||| | |||||||||||    
T  21595197 aacaactttttctttaataaatattgttgttgatgtcattaaaataataataatttagattatgtatttttgttata 21595121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 28309862 - 28309814
Alignment:
Q  192 ttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||||||||||||||||| |||||||| | |||  |||||||||||||    
T  28309862 ttggtgtcattaaaaagatgagaatttaaaatataatttttgttatatt 28309814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 42896868 - 42896791
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    |||||| ||||||| |||||| |||  | ||||||||||||||||  | |||||||||||||||  ||||||||||||||    
T  42896868 aaacaactttttctgtaataaagatgtttgttggtgtcattaaaa--aaaagaatttagattatatttttttgttatatt 42896791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 12069442 - 12069527
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||||||| |||||| |||||||||||||| |||||| |||||||||||||||||   ||||||||||||||| ||||||||||||||    
T  12069442 ttatactcttaaacaactttttctataataaagattgttgttggtgtcattaaaaa---aagaatttagattatattttttgttatatt 12069527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 38702299 - 38702221
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatct-tttttgttatatt 240  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||| | |||||||||||||    
T  38702299 aacaactttttctataataaagattgttgttggtgtcattaaaaaaataagaatttagattatatatttttgttatatt 38702221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 1071223 - 1071134
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttt-ttgttatatt 240  Q
    ||||||||| |||||| |||||||||||||| |||||| |||| |||||||||||| ||||| ||||||||||| |||| ||||||||||    
T  1071223 ttatactcttaaacaattttttctataataaagattgttgttgatgtcattaaaaaaataagtatttagattatattttattgttatatt 1071134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 20579407 - 20579337
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||||||||||| ||||||  |||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  20579407 tttttctataataaagattgtttttggtgtcattaaaaa-ataagaatttagattatattttttgttatatt 20579337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 36205274 - 36205202
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctt-ttttgttatatt 240  Q
    ||||||||||||||  ||||| ||||||||||||||||| ||||||||||||||||| || ||||||||||||    
T  36205274 tttttctataataaatattgttgttggtgtcattaaaaaaataagaatttagattatattcttttgttatatt 36205202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 36080237 - 36080313
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||  |||||||||||||||||  ||||||||||||||    
T  36080237 aacaattttttctataataaagattgttgttggtgtcattaaaa--ataagaatttagattatatttttttgttatatt 36080313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 18072385 - 18072460
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||  | ||||||||||||||| ||||| ||||||||    
T  18072385 aacaactttttctataataaagattgttgttggtgtcattaaaa--aaaagaatttagattatatttttcgttatatt 18072460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 19063875 - 19063945
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcatt-aaaaagataagaatttagattatctttttt 232  Q
    ||||| |||||||||||||| |||||| |||||||||||| ||||| ||||||||||||||||| ||||||    
T  19063875 aacaactttttctataataaagattgttgttggtgtcattaaaaaaaataagaatttagattatatttttt 19063945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 24100669 - 24100759
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcatt-aaaaagataagaatttagattat-cttttttgttatatt 240  Q
    |||||| || ||||||  ||||||||||||| |||||| |||||||||||| ||||| |||||||||||||||||  ||||||||||||||    
T  24100669 ttatacccttaaacaatattttctataataaagattgttgttggtgtcattaaaaaaaataagaatttagattataattttttgttatatt 24100759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 33676800 - 33676715
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||| || |||||| |||||||||||||| |||||| |||||||||||||||   | ||||||||||||| | ||||||||||||||    
T  33676800 ttatacccttaaacaattttttctataataaagattgttgttggtgtcattaaa---agaagaatttagatttttttttttgttatatt 33676715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 29241369 - 29241280
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttt-tgttatatt 240  Q
    ||||||| | |||||  ||||| ||||||| ||||||| |||||| ||||||||||||||||| |||||||||| ||||| |||||||||    
T  29241369 ttatactattaaacagctttttatataatagtgattgttgttggtatcattaaaaagataagattttagattatatttttatgttatatt 29241280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 12069659 - 12069722
Alignment:
Q  174 ctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||||||| |||||| |||||||||||||||||   ||||||||||||||| ||||||||||||||    
T  12069659 ctataataaagattgttgttggtgtcattaaaaa---aagaatttagattatattttttgttatatt 12069722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 169 - 232
Target Start/End: Original strand, 19064090 - 19064153
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||||||||||| |||||| ||| ||||||||||||| ||||||||||| ||||| ||||||    
T  19064090 tttttctataataaagattgttgttcgtgtcattaaaaaaataagaatttaaattatatttttt 19064153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 41122687 - 41122755
Alignment:
Q  170 ttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||| |||||||| |||||| ||||||||||||||||  | ||||||||||||||| ||||||||||||||    
T  41122687 ttttttataataaagattgttgttggtgtcattaaaa--aaaagaatttagattatattttttgttatatt 41122755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 19813962 - 19813890
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    |||||| || |||||| |||||||||||||| |||||| ||||||||||||||||| || |||||||| |||||    
T  19813962 ttatacacttaaacaattttttctataataaagattgttgttggtgtcattaaaaaaat-agaatttaaattat 19813890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 155 - 240
Target Start/End: Original strand, 34063225 - 34063308
Alignment:
Q  155 tactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||| ||||||||||||||||||||| ||| || ||||||||||||||||| || | |||||||| | | ||||||||||||||    
T  34063225 tactcttaaacaaatttttctataataaagatcgttgttggtgtcattaaaaa-atgataatttaga-tcttttttttgttatatt 34063308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 360348 - 360404
Alignment:
Q  170 ttttctataataatgattgtcgttggtgtcatt-aaaaagataagaatttagattat 225  Q
    |||||||||||||||||||| |||||||||||| ||||| ||||||||||| |||||    
T  360348 ttttctataataatgattgttgttggtgtcattaaaaaaaataagaatttatattat 360404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 10553176 - 10553263
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||| || ||||||  |||||||||||||  ||||| ||||||||||||||||| | | ||||||||||| | ||||||||||||||    
T  10553176 ttatacccttaaacaacgttttctataataaaaattgttgttggtgtcattaaaaa-aaatgaatttagattttgttttttgttatatt 10553263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 20625316 - 20625380
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaat 216  Q
    |||||||||||||||| ||||||||||||||||| | | || |||||| ||||||||| ||||||    
T  20625316 ttatactctaaaacaattttttctataataatgaattttgtaggtgtccttaaaaagaaaagaat 20625380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 24004624 - 24004545
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaaga--taagaatttagattatcttttttgttatatt 240  Q
    ||||| |||||||||||||| |||||| | ||||| ||||||||| |  ||||| |||||||||| ||||||||||||||    
T  24004624 aacaactttttctataataaagattgttgctggtgacattaaaaaaaaataagattttagattatattttttgttatatt 24004545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 41384563 - 41384488
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||| |||||||||||||| |||| | | |||| ||||||||||   ||||||||||||||| ||||||||||||||    
T  41384563 aaacaactttttctataataaagatttttgatggtatcattaaaaa---aagaatttagattatattttttgttatatt 41384488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 963323 - 963248
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctt-ttttgttat 237  Q
    ||||| ||||| |||||||| |||||| ||||||||||||||||| |||  |||||||||||| || |||||||||    
T  963323 aacaactttttttataataaagattgttgttggtgtcattaaaaaaatagaaatttagattatattattttgttat 963248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 9415106 - 9415035
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcatt-aaaaagataagaatttagattatcttttttg 233  Q
    ||||| ||||||||||||||  ||||| |||||| ||||| ||||| ||||||||||||||||| |||||||    
T  9415106 aacaactttttctataataaaaattgttgttggtatcattaaaaaaaataagaatttagattatattttttg 9415035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 42949740 - 42949807
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| |||||||||||||| |||||| ||||||||||||||||  | ||||||||||||||| ||||||    
T  42949740 aaacaattttttctataataa-gattgttgttggtgtcattaaaa--aaaagaatttagattatatttttt 42949807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 16039353 - 16039423
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || || |||||||| |||||| ||||||||||||||||| ||||| ||||| ||||| ||||||    
T  16039353 aaacaacttgttttataataaagattgttgttggtgtcattaaaaaaataagtatttaaattatatttttt 16039423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 206
Target Start/End: Complemental strand, 35126016 - 35125962
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaa 206  Q
    ||||||||| |||||| |||||| ||||||| |||||| ||||||||||||||||    
T  35126016 ttatactcttaaacaactttttcaataataaagattgttgttggtgtcattaaaa 35125962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 36341723 - 36341669
Alignment:
Q  153 tatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||| || |||||| |||||||||||||| |||||||||| |||||||||||||    
T  36341723 tatacccttaaacaattttttctataataaagattgtcgttagtgtcattaaaaa 36341669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 38692564 - 38692640
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    ||||| |||||||||||||| ||||||  |||||||||||||||| || ||||||||||||||  ||||||||||||||    
T  38692564 aacaactttttctataataaagattgttattggtgtcattaaaaa-at-agaatttagattatatttttttgttatatt 38692640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 240
Target Start/End: Original strand, 41014284 - 41014355
Alignment:
Q  167 aatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||||||||||||||  ||||| |||| |||||||||||  |  |||||||||||||| ||||||||||||||    
T  41014284 aatttttctataataaatattgttgttgatgtcattaaaataa--agaatttagattatattttttgttatatt 41014355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 230
Target Start/End: Original strand, 44857484 - 44857562
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttt 230  Q
    ||||||| ||||| || ||||||| ||||||||||||| || |||||||||| ||| |||||| |||| ||||| ||||    
T  44857484 ttatactataaaataattttttctttaataatgattgttgtcggtgtcattacaaaaataagagtttaaattatatttt 44857562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 13450154 - 13450227
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||| ||||||||||||||  ||||| |||| |||||||||||||    ||||||||||||| ||||||||||||||    
T  13450154 aaacaactttttctataataaa-attgttgttgctgtcattaaaaag----gaatttagattatattttttgttatatt 13450227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 629614 - 629693
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| |||||||||||||| ||||||  |||||||| ||| ||| | ||||||||||||||| ||||||    
T  629614 ttatacccttaaacaattttttctataataaagattgtttttggtgtcgttataaa-aaaagaatttagattatatttttt 629693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 44020113 - 44020061
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaa 204  Q
    ||||||||  |||||| |||||||||||||| |||||| ||||||||||||||    
T  44020113 ttatactcgtaaacaactttttctataataaagattgttgttggtgtcattaa 44020061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 3357758 - 3357683
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| |||||||||||||||   ||| ||||||||||||||||  | ||||||||||||||| ||||||    
T  3357758 ttatacccttaaacaactttttctataataat---tgttgttggtgtcattaaaa--aaaagaatttagattatatttttt 3357683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 7603738 - 7603683
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||||||| |||||| |||||||||||||| ||| || ||| |||||||||||||    
T  7603738 ttatactcttaaacaactttttctataataaagatcgttgtttgtgtcattaaaaa 7603683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 13837034 - 13836979
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||||||  ||||| |||||||||||||| |||||| ||||| |||||||||||    
T  13837034 ttatactcttgaacaattttttctataataaagattgttgttggcgtcattaaaaa 13836979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 30977072 - 30977002
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    |||||| || || ||| ||||| |||||||| |||||| |||||||||||||||||   |||||||||||||||    
T  30977072 ttatacgctcaatcaactttttatataataaagattgttgttggtgtcattaaaaa---aagaatttagattat 30977002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 19133436 - 19133493
Alignment:
Q  174 ctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||| |||||| ||||||||||||||||| | ||||||||| ||||| ||||||    
T  19133436 ctataataaagattgttgttggtgtcattaaaaata-aagaatttatattatatttttt 19133493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 33134101 - 33134023
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagat-tatcttttttgttatatt 240  Q
    ||||||||||||||||| || ||||   |||||||||||| |||  ||||||||||| || ||| ||||||||||||||    
T  33134101 aacaaatttttctataacaaagattcatgttggtgtcatttaaagaataagaatttaaatatattttttttgttatatt 33134023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 240
Target Start/End: Original strand, 36802386 - 36802432
Alignment:
Q  194 ggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||||| |||||| |||| |||||||||||| ||||||||||||||    
T  36802386 ggtgtcactaaaaaaataacaatttagattattttttttgttatatt 36802432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 39271656 - 39271618
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  39271656 tttttctataataaagattgttgttggtgtcattaaaaa 39271618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 40301685 - 40301627
Alignment:
Q  154 atactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataa 212  Q
    ||||||| |||  |||||||||||||||| |||||| |||| |||||||||||| ||||    
T  40301685 atactcttaaaacaatttttctataataaagattgttgttgatgtcattaaaaatataa 40301627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 42185788 - 42185857
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| ||||||||||||||  | ||| ||||||||||||||||| | |||| |||||||||| ||||||    
T  42185788 aaacaattttttctataataaatactgttgttggtgtcattaaaaa-aaaagattttagattatatttttt 42185857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 13594333 - 13594263
Alignment:
Q  153 tatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||| || |||||| |||||||||||||| ||| || |||| |||||||||||  | |||||||||||||||    
T  13594333 tatacccttaaacaattttttctataataaagatcgttgttgatgtcattaaaa--aaaagaatttagattat 13594263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 17372471 - 17372508
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaa 206  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  17372471 tttttctataataaagattgttgttggtgtcattaaaa 17372508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 18746050 - 18746115
Alignment:
Q  167 aatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||| ||||||||||||||| |||| |||||||  ||| |||| |||||||||| | ||||||    
T  18746050 aatttttttataataatgattgttgttgatgtcattgcaaaaataaaaatttagattttttttttt 18746115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 28146084 - 28146154
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatct-tttttgttatatt 240  Q
    ||||||||||||||  || || ||||||||||||||||  | ||||||||||||||| | |||||||||||||    
T  28146084 tttttctataataaatatcgttgttggtgtcattaaaa--acaagaatttagattatatatttttgttatatt 28146154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 42060484 - 42060430
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||||||||||||  ||||| ||||||||||||||||  | |||||||||||||||    
T  42060484 tttttctataataaaaattgttgttggtgtcattaaaa--aaaagaatttagattat 42060430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 45407012 - 45407056
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaa 206  Q
    |||||| || ||||||||||| |||||| ||||||||||||||||    
T  45407012 aaacaatttcttctataataaagattgttgttggtgtcattaaaa 45407056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 4e-22; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 32006745 - 32006664
Alignment:
Q  152 ttatactctaaaacaaattttt-ctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||| |||||| ||||| ||||||    
T  32006745 ttatactctaaaacaatttttttctataataatgattgttgttggtgtcattaaaaagataaaaatttatattatatttttt 32006664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 230
Target Start/End: Original strand, 1397181 - 1397259
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttt 230  Q
    |||||| || |||||| |||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||    
T  1397181 ttatacccttaaacaagtttttcaataataaagattgtcgttggtgtcattaaaaaaataagaatttagattatatttt 1397259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 26088720 - 26088806
Alignment:
Q  154 atactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||| ||||| ||| ||||||||||||||||||||| |||| ||||||||||| ||||||||||| |||||| |||||| |||||||    
T  26088720 ataccctaaagcaattttttctataataatgattgttgttgttgtcattaaaaggataagaattttgattatattttttattatatt 26088806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 46620693 - 46620615
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatct-tttttgttatatt 240  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||| | |||||||||||||    
T  46620693 aacaactttttctataataaagattgttgttggtgtcattaaaaaaataagaatttagattatatatttttgttatatt 46620615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 2133537 - 2133626
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    ||||||||| |||||| |||||||||||||| |||||| ||||||||| |||||||  ||||||||||||||||  ||||||||||||||    
T  2133537 ttatactcttaaacaattttttctataataaagattgttgttggtgtcgttaaaaaattaagaatttagattatgtttttttgttatatt 2133626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 7059375 - 7059446
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||| |||||||| |||||| ||||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  7059375 tttttttataataaagattgttgttggtgtcgttaaaaaaataagaatttagattatattttttgttatatt 7059446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 50561279 - 50561201
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||| ||||||||||||||  ||||| ||||||||||||||||| ||| ||||||| ||||| ||||||||||||||    
T  50561279 aaacaattttttctataataaaaattgttgttggtgtcattaaaaaaatatgaatttaaattatattttttgttatatt 50561201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 240
Target Start/End: Complemental strand, 49319315 - 49319234
Alignment:
Q  160 taaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttt-ttgttatatt 240  Q
    |||||||| ||||| ||||||||| | ||| ||||||||| ||||||||||||||||||||||||| |||| ||||||||||    
T  49319315 taaaacaactttttatataataataaatgttgttggtgtcgttaaaaagataagaatttagattatattttcttgttatatt 49319234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 37013374 - 37013283
Alignment:
Q  152 ttatactctaaaacaaattttt-ctataataatgattgtcgttggtgtcattaaaaagataagaatttagat--tatcttttttgttatatt 240  Q
    ||||||| |||||||| ||||| |||||||||||||||| ||||| || || ||||||||||||||||||||  ||| ||||||||||||||    
T  37013374 ttatactataaaacaatttttttctataataatgattgttgttggcgttatcaaaaagataagaatttagattgtatattttttgttatatt 37013283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 184 - 245
Target Start/End: Original strand, 7396486 - 7396547
Alignment:
Q  184 gattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatattcttcg 245  Q
    |||||| ||| ||||||||||||||||||||||||||||||| ||||||||| |||| ||||    
T  7396486 gattgttgtttgtgtcattaaaaagataagaatttagattatattttttgttttattgttcg 7396547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 28494907 - 28494967
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatt 223  Q
    ||||| |||||||||||||| |||||| |||||||| |||||||| |||||||||||||||    
T  28494907 aacaactttttctataataaagattgttgttggtgtgattaaaaaaataagaatttagatt 28494967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 6488111 - 6488161
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaattta 219  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||||||||||    
T  6488111 tttttttataataatgattgttgttggtgtcattaaaaatataagaattta 6488161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 6196642 - 6196715
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    |||||| || |||||| ||||| |||||||| |||||| |||||||||||||||||  |||||||||| |||||    
T  6196642 ttatacccttaaacaactttttgtataataaagattgttgttggtgtcattaaaaaagtaagaatttaaattat 6196715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 28808740 - 28808829
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    ||||| ||| |||||| ||||||||||||||| ||||| |||| |||  ||||| ||||||||||||| |||||  ||||||||||||||    
T  28808740 ttatattcttaaacaactttttctataataataattgttgttgatgttgttaaagagataagaatttatattatatttttttgttatatt 28808829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 52954093 - 52954161
Alignment:
Q  156 actctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||| |||||| |||||||||||||| |||||| ||||||||||||||||| | ||||||||| |||||    
T  52954093 actcttaaacaactttttctataataaagattgttgttggtgtcattaaaaa-aaaagaatttatattat 52954161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 232
Target Start/End: Original strand, 2548431 - 2548495
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtca-ttaaaaagataagaatttagattatctttttt 232  Q
    |||||||||||||| |||||| |||||||||| ||||||| |||| |||||||||||| ||||||    
T  2548431 tttttctataataaagattgttgttggtgtcatttaaaaaaataataatttagattatatttttt 2548495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 30503146 - 30503202
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||| |||||||| |||||| ||||||||||||| ||| |||||||||||||||||    
T  30503146 tttttttataataaagattgttgttggtgtcattacaaaaataagaatttagattat 30503202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 34409828 - 34409757
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcatta-aaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||||||||||| |||||| | ||||||||||| |||| |||||||||||||||||  |||||||||||||    
T  34409828 tttttctataataaagattgttgctggtgtcattaaaaaaaataagaatttagattat-atttttgttatatt 34409757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 239
Target Start/End: Original strand, 5881917 - 5881991
Alignment:
Q  167 aatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatct--tttttgttatat 239  Q
    |||||||||||||||| ||||||  ||| ||||||||||||||||| |||||| ||||| |  ||||||||||||    
T  5881917 aatttttctataataaagattgttattgatgtcattaaaaagataaaaatttatattatattatttttgttatat 5881991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 27376385 - 27376317
Alignment:
Q  171 tttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    |||||||||||| |||||| ||||||||||||||||  | |||||||||||||||  ||||||||||||||    
T  27376385 tttctataataaagattgttgttggtgtcattaaaa--aaaagaatttagattataattttttgttatatt 27376317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 36802672 - 36802601
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatt 223  Q
    ||||| ||| |||||| ||| |||||||||| |||||| ||||||||||||||||| |||  ||||||||||    
T  36802672 ttataatcttaaacaactttgtctataataaagattgttgttggtgtcattaaaaaaatagtaatttagatt 36802601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 50821409 - 50821346
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||||||||||| |||||| | | ||||| ||||||| ||||||||||||||||| ||||||    
T  50821409 tttttctataataaagattgttgcttgtgtctttaaaaatataagaatttagattatatttttt 50821346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 53451252 - 53451331
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatct-tttttgttatatt 240  Q
    ||||||||||||| ||||||| || ||| | ||||||||||||||  | ||||||||||||||| | |||||||||||||    
T  53451252 aaacaaatttttccataataaagaatgttgctggtgtcattaaaagaaaaagaatttagattatatatttttgttatatt 53451331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 668262 - 668303
Alignment:
Q  191 gttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||||||||||| ||||||||||||||||| ||||||    
T  668262 gttggtgtcattaaaaaaataagaatttagattatatttttt 668303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 20702354 - 20702432
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| |||||||||||||| ||| || |||||||||||| |||  | ||||||||||||||| ||||||    
T  20702354 ttatacccttaaacaactttttctataataaagatcgttgttggtgtcattgaaa--aaaagaatttagattatatttttt 20702432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 20818250 - 20818197
Alignment:
Q  170 ttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatt 223  Q
    |||| |||||||| |||||| |||| |||||||||||| |||||||||||||||    
T  20818250 ttttttataataaagattgttgttgatgtcattaaaaaaataagaatttagatt 20818197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 239
Target Start/End: Complemental strand, 35034875 - 35034798
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcatt-aaaaagataagaatttagattatcttttttgttatat 239  Q
    ||||| ||||| |||||||| |||||| |||| ||||||| ||||| | ||||||||||||||| |||||| ||||||    
T  35034875 aacaactttttttataataaagattgttgttgttgtcattgaaaaaaaaaagaatttagattatattttttcttatat 35034798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 49574890 - 49574935
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||||||||||||||||||| ||| || |||||||||||||||||    
T  49574890 aaacaaatttttctataataaagatcgttgttggtgtcattaaaaa 49574935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 41169167 - 41169227
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataa 212  Q
    |||||| || |||||| |||||||||||||| |||||| ||||||||| ||||||| ||||    
T  41169167 ttatacccttaaacaactttttctataataaagattgttgttggtgtcgttaaaaaaataa 41169227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 554780 - 554717
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||||| ||||| |||||  |||| |||||||||||| ||||||||||| ||||| ||||||    
T  554780 tttttctagaataaagattggtgttgatgtcattaaaaaaataagaatttaaattatatttttt 554717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 2358639 - 2358694
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| ||||||||||||||  ||||| |||||||||||||||||    
T  2358639 ttatacccttaaacaactttttctataataaaaattgttgttggtgtcattaaaaa 2358694  T

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Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 5101469 - 5101512
Alignment:
Q  176 ataataatgattgtcgttggtgtcattaaaaagataagaattta 219  Q
    |||||||| ||||| |||||||| ||||||||||||||||||||    
T  5101469 ataataataattgttgttggtgtgattaaaaagataagaattta 5101512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 6386596 - 6386659
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaa-aaagataagaatttagattat 225  Q
    ||||||||| ||||||||||  ||||| |||| ||||||||| ||| |||||||||||||||||    
T  6386596 aacaaatttgtctataataaaaattgttgttgatgtcattaagaaaaataagaatttagattat 6386659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 20702525 - 20702580
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| |||||||||||||| ||| || |||||||||||||||||    
T  20702525 ttatacccttaaacaactttttctataataaagatcgttgttggtgtcattaaaaa 20702580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 35447735 - 35447680
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || ||| || |||||||||||||| |||||| |||||||||||||||||    
T  35447735 ttatacccttaaataactttttctataataaagattgttgttggtgtcattaaaaa 35447680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 35595673 - 35595618
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||||||| |||||  |||||||||||||| |||||| ||| |||||||||||||    
T  35595673 ttatactcttaaacagttttttctataataaagattgttgttagtgtcattaaaaa 35595618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 37143397 - 37143312
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatct-tttttgttatatt 240  Q
    |||||| || |||||| ||||||||||||||  ||||| |||||||||||||||||   ||||||||||||| | | |||||||||||||    
T  37143397 ttatacccttaaacaactttttctataataaa-attgttgttggtgtcattaaaaa---aagaatttagattgtatgtttttgttatatt 37143312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 47931415 - 47931360
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| ||||| |||||||| |||||| |||||||||||||||||    
T  47931415 ttatacccttaaacaactttttatataataaagattgttgttggtgtcattaaaaa 47931360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 218
Target Start/End: Original strand, 893897 - 893962
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaattt 218  Q
    |||||| || |||||| ||||| ||||||||| ||||| |||| |||||||||||| ||||||||||    
T  893897 ttataccctgaaacaattttttgtataataat-attgttgttgatgtcattaaaaaaataagaattt 893962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 1363749 - 1363811
Alignment:
Q  178 aataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||| |||||  ||||||||||||||| | || ||||||| |||||| ||||||||||||||    
T  1363749 aataaagattggtgttggtgtcattaaacaaattagaattttgattatattttttgttatatt 1363811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 6788577 - 6788659
Alignment:
Q  160 taaaacaaatttttctataataatg-attgtcgttggtgtcatt-aaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||||| ||||||||||||||   ||||| |||||||||||| ||||| ||||||||||||| | |  |||||||||||||    
T  6788577 taaaacaattttttctataataaaatattgttgttggtgtcatttaaaaaaataagaatttagagtgttatttttgttatatt 6788659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 27088490 - 27088573
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||| || ||||||  |||||||||||||  ||||| |||||||||||||||||   |||||||||||||||  |||||||||||||    
T  27088490 ttatacccttaaacaatcttttctataataaa-attgttgttggtgtcattaaaaa---aagaatttagattat-atttttgttatatt 27088573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 32023439 - 32023516
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||| |||||| ||||| |||||||| |||||| | || ||||||||| ||   ||||||||||||||| ||||||    
T  32023439 ttatactcttaaacaactttttttataataaagattgttgctgatgtcattaacaa---aagaatttagattatatttttt 32023516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 20964788 - 20964832
Alignment:
Q  193 tggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||||||||||||   ||||||||||||||| ||||||||||||||    
T  20964788 tggtgtcattaaaaa---aagaatttagattatattttttgttatatt 20964832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 37143856 - 37143787
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| ||||| |||||||  |||||| | ||||||||||||||| ||||| |||||| |||| ||||||    
T  37143856 aacaactttttttataatagagattgttgatggtgtcattaaaaaaataagcatttaggttatatttttt 37143787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 26510315 - 26510236
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||| ||| || |||||| ||||||| |||  |  |||||| ||||||||| ||||||||||||||||| ||||||    
T  26510315 ttatactcttaaataactttttccataataaagatatttcttggtgacattaaaaa-ataagaatttagattatatttttt 26510236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 44182315 - 44182243
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcatt-aaaaagataa-gaatttagattatctttttt 232  Q
    |||||| |||||||||||||| |||||||  |||||||||| ||||||| || ||||||| ||||| ||||||    
T  44182315 aaacaattttttctataataaagattgtccgtggtgtcattgaaaaagaaaacgaatttaaattatatttttt 44182243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 4e-22; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 40808816 - 40808739
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||  ||||||||||||||    
T  40808816 aacaactttttctataataaagattgttgttggtgtcattaaaaaaataagaatttagattaatttttttgttatatt 40808739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 163 - 245
Target Start/End: Original strand, 11408992 - 11409075
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatattcttcg 245  Q
    |||| ||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||  |||||||||||||| ||||    
T  11408992 aacatatttttctataataaagattgttgttggtgtcattaaaaaaataagaatttagattatatttttttgttatattattcg 11409075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 43416024 - 43415959
Alignment:
Q  167 aatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||| ||||||    
T  43416024 aatttttctataataataattgttgttggtgtcattaaaatgataagaatttagattatatttttt 43415959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 25298061 - 25298140
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||| | |||||||||||||||  ||||||||||||||    
T  25298061 aaacaaatttttctataataaagatcgttgttggtgtcattaaaaaaaaaagaatttagattatatttttttgttatatt 25298140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 11344937 - 11345021
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||||||| |||||| |||||||||||||| |||||| |||||||||||||||||   ||||||||||||||| |||||||| |||||    
T  11344937 ttatactcttaaacaactttttctataataaagattgttgttggtgtcattaaaaa---aagaatttagattat-ttttttgtcatatt 11345021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 33474282 - 33474372
Alignment:
Q  152 ttatactctaaaacaaatttt-tctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatct-tttttgttatatt 240  Q
    ||||||| |||||||| |||| ||||||||||||||||| |||| ||| ||||||||||||| |||||||||||| | |||||||||||||    
T  33474282 ttatactttaaaacaatttttttctataataatgattgttgttgttgttattaaaaagataataatttagattatatatttttgttatatt 33474372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 12267063 - 12267152
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    |||||| || |||||| |||||||||||||| |||||| ||||||||||||||||| |||  ||||||||||||  ||||||||||||||    
T  12267063 ttatacccttaaacaactttttctataataaagattgttgttggtgtcattaaaaaaatatcaatttagattataattttttgttatatt 12267152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 240
Target Start/End: Complemental strand, 25822187 - 25822115
Alignment:
Q  167 aatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||||||||||||| |||||||||||||||||||||| | | ||||||||| ||||| ||||||||||||||    
T  25822187 aatttttctataataaagattgtcgttggtgtcattaaaca-aaaagaatttacattatattttttgttatatt 25822115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 24561242 - 24561314
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatct-tttttgttatatt 240  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||||||||| ||||| | |||||||||||||    
T  24561242 tttttctataataaagattgttgttggtgtcattaaaaaaataagaatttaaattatatatttttgttatatt 24561314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 33326840 - 33326753
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||||||| |||||| ||||||||||||||  ||||| ||||||||||||||||| ||||||||| ||||| | ||||| ||||||||    
T  33326840 ttatactcttaaacaactttttctataataaatattgttgttggtgtcattaaaaaaataagaattgagatt-tttttttcgttatatt 33326753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 36605568 - 36605488
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||| | |||  |||||||||||||| |||||| ||||||||||||||||| |||| |||||||||||| ||||||    
T  36605568 ttatactcttagacatttttttctataataaagattgttgttggtgtcattaaaaaaataaaaatttagattatatttttt 36605488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 13315291 - 13315212
Alignment:
Q  153 tatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| || |||||| |||||||||||||| |||||| |||||| |||||||||| ||||||||||| ||||| ||||||    
T  13315291 tatacccttaaacaactttttctataataaagattgttgttggtatcattaaaaaaataagaatttaaattatatttttt 13315212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 27927117 - 27927046
Alignment:
Q  153 tatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    |||| |||||||||| ||||||||||| || |||||| |||| |||||||||||||| |||||||||||||||    
T  27927117 tatagtctaaaacaa-tttttctataacaacgattgttgttgatgtcattaaaaagacaagaatttagattat 27927046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 115942 - 115864
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    |||||| ||||| |||||||| |||||| ||||||||||||||||| | |||||||||||||||  ||||||||||||||    
T  115942 aaacaactttttatataataaagattgttgttggtgtcattaaaaata-aagaatttagattatatttttttgttatatt 115864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 34969415 - 34969360
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||||||| |||||| |||||||||||||| |||||| |||||||||||||||||    
T  34969415 ttatactcttaaacaattttttctataataaagattgttgttggtgtcattaaaaa 34969360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 45943299 - 45943378
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    |||||| |||||||||||||| |||||| ||| ||||||||||||| | ||||||||| |||||  ||||||||||||||    
T  45943299 aaacaattttttctataataaagattgttgttagtgtcattaaaaaaaaaagaatttaaattatatttttttgttatatt 45943378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 17579964 - 17579899
Alignment:
Q  170 ttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgtta 236  Q
    |||| |||||||| |||||| |||| |||||||||||||| ||||||||||||||| ||||||||||    
T  17579964 ttttttataataaagattgttgttgatgtcattaaaaaga-aagaatttagattatattttttgtta 17579899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 34748818 - 34748905
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    ||||||||| |||||| ||||||| ||| || |||||| ||||||||||||||||  | |||||||||||||||  ||||||||||||||    
T  34748818 ttatactcttaaacaactttttctttaacaaggattgttgttggtgtcattaaaa--aaaagaatttagattatatttttttgttatatt 34748905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 5965820 - 5965751
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| ||||||| |||||| |||| | |||| |||||||||||| ||||||||||||||||| ||||||    
T  5965820 aacaactttttctttaataaagattattgttgatgtcattaaaaaaataagaatttagattatatttttt 5965751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 21335085 - 21335040
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||    
T  21335085 aaacaactttttctataataaagattgtcgttggtgtcattaaaaa 21335040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 31845105 - 31845190
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||| || |||||| ||||||||||||||  ||||| ||||||||||||||||| |  ||||||||| |||| ||||||||||||||    
T  31845105 ttatacccttaaacaactttttctataataaa-attgttgttggtgtcattaaaaaaa--agaatttaggttatattttttgttatatt 31845190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 46880059 - 46880137
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| ||||||| |||||| |||||| ||||||||||||||||  | ||||||||||||||| ||||||    
T  46880059 ttatacccttaaacaattttttctgtaataaagattgttgttggtgtcattaaaa--aaaagaatttagattatatttttt 46880137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 13303951 - 13304015
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcatt-aaaaagataagaatttagattat 225  Q
    |||||| |||||||||||||| |||||| |||||||||||| ||||| | |||||||||||||||    
T  13303951 aaacaactttttctataataaagattgttgttggtgtcattaaaaaaaaaaagaatttagattat 13304015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 12301014 - 12301098
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatct-tttttgttat 237  Q
    ||||||| | |||||| ||||||||||||||  ||||| ||||||||||||||||  | ||||||||||||||| | ||||||||||    
T  12301014 ttatacttttaaacaactttttctataataaaaattgttgttggtgtcattaaaa--aaaagaatttagattatatctttttgttat 12301098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 15470487 - 15470542
Alignment:
Q  177 taataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| |||||| |||||||| |||||||| ||||||||||||||||| ||||||    
T  15470487 taataaagattgttgttggtgttattaaaaaaataagaatttagattatatttttt 15470542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 16424482 - 16424537
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| |||||||||||||| |||||| |||||||||||||||||    
T  16424482 ttatacccttaaacaactttttctataataaggattgttgttggtgtcattaaaaa 16424537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 14386879 - 14386941
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||| ||| |||||||||| |||||| |||| ||||||| |||| |||||||||||||||||    
T  14386879 aacaattttctctataataaagattgttgttgatgtcattcaaaaaataagaatttagattat 14386941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 43575717 - 43575639
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || ||||||||||||||||||||| |||  | |||||||||||||||||  |  ||||||||||||| ||||||    
T  43575717 ttatacccttaaacaaatttttctataataaagatcattgttggtgtcattaaaaaagt--gaatttagattatatttttt 43575639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 1531323 - 1531257
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| |||||||||||||| | |||| |||||||||||||||||   ||||||||||||||| ||||||    
T  1531323 aaacaattttttctataataaag-ttgttgttggtgtcattaaaaa---aagaatttagattatatttttt 1531257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 8209480 - 8209440
Alignment:
Q  185 attgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  8209480 attgttgttggtgtcattaaaaaaataagaatttagattat 8209440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 8574014 - 8574062
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtca 200  Q
    ||||||||| |||||| |||||||||||||| |||||| ||||||||||    
T  8574014 ttatactcttaaacaactttttctataataaagattgttgttggtgtca 8574062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 31528643 - 31528687
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaa 206  Q
    |||||| |||||||||||||| |||||| ||||||||||||||||    
T  31528643 aaacaactttttctataataaagattgttgttggtgtcattaaaa 31528687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 50943944 - 50943896
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatt 217  Q
    ||||| |||||||| |||||| ||||||||||||||||| |||||||||    
T  50943944 tttttttataataaagattgttgttggtgtcattaaaaaaataagaatt 50943896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 14746521 - 14746467
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||||||| |||||| ||||||||||||||  ||||| |||||||||||||||||    
T  14746521 ttatactcttaaacaactttttctataataa-aattgttgttggtgtcattaaaaa 14746467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 16823678 - 16823623
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| |||||||||||||| ||||||||||| ||| ||||||||    
T  16823678 ttatacccttaaacaactttttctataataaagattgtcgttgatgttattaaaaa 16823623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 21343896 - 21343951
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| |||| ||||||||| |||||| |||||||||||||||||    
T  21343896 ttatacccttaaacaatttttactataataaagattgttgttggtgtcattaaaaa 21343951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 21348761 - 21348816
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| |||| ||||||||| |||||| |||||||||||||||||    
T  21348761 ttatacccttaaacaatttttactataataaagattgttgttggtgtcattaaaaa 21348816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 47576780 - 47576725
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||||| | |||||| ||||||||||||||  ||||| |||||||||||||||||    
T  47576780 ttatacttttaaacaactttttctataataaatattgttgttggtgtcattaaaaa 47576725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 48715933 - 48715865
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| |||||||||||||||||| || |||| |||||||||||  | ||||||||| ||||| ||||||    
T  48715933 aaacaactttttctataataatgatcgttgttgatgtcattaaaa--aaaagaatttaaattatatttttt 48715865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 240
Target Start/End: Complemental strand, 52397171 - 52397102
Alignment:
Q  170 ttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt-gttatatt 240  Q
    ||||||||||||| |||||| |||||| |||||||||||| ||||||| ||||||| |||||| ||||||||    
T  52397171 ttttctataataa-gattgttgttggtatcattaaaaaga-aagaattcagattatattttttagttatatt 52397102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 2666161 - 2666237
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| ||||||||||||||  |||||  ||||||||||||||||   ||||||||||||||| ||||||    
T  2666161 ttatacccttaaacaactttttctataataa-aattgttattggtgtcattaaaaa---aagaatttagattatatttttt 2666237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 10844319 - 10844250
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| |||||||||||||| ||  || |||| |||||||||||| | ||||||||||||||| ||||||    
T  10844319 aaacaattttttctataataaagaacgttgttgatgtcattaaaaa-aaaagaatttagattatatttttt 10844250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 12780243 - 12780312
Alignment:
Q  170 ttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||||||||||| |||||| |||  |||||||||||| | | ||||||||||||  ||||||||||||||    
T  12780243 ttttctataataaagattgttgttaatgtcattaaaaa-aaaggaatttagattacattttttgttatatt 12780312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 23773424 - 23773366
Alignment:
Q  167 aatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    |||||||||||||||| |||||| |||||||| |||| ||| |||| |||||| |||||    
T  23773424 aatttttctataataaagattgttgttggtgttattacaaaaataataatttaaattat 23773366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 48668488 - 48668568
Alignment:
Q  151 tttatactctaaaacaaatttttctataataatgattgtcgttggtgtcatt--aaaaagataagaatttagattatctttt 230  Q
    |||||||||| |||||| ||||||||| | || |||||  ||||||||||||  ||||| ||||||||||||||||| ||||    
T  48668488 tttatactcttaaacaa-tttttctatgacaaagattggtgttggtgtcattaaaaaaaaataagaatttagattatatttt 48668568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 8096240 - 8096317
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| ||||| ||||||||  ||||| ||||||||||||||||  | ||||||||||||||| ||||||    
T  8096240 ttatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaaa--aaaagaatttagattatatttttt 8096317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 12264891 - 12264948
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaaga 209  Q
    |||||| || |||||| |||| ||||||||| |||||| ||| |||||||||||||||    
T  12264891 ttatacccttaaacaacttttactataataaagattgttgttagtgtcattaaaaaga 12264948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 13315154 - 13315109
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| ||||||||| |||| |||||| |||||||||||||||||    
T  13315154 aaacaactttttctattataaagattgttgttggtgtcattaaaaa 13315109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 212
Target Start/End: Complemental strand, 24005101 - 24005060
Alignment:
Q  171 tttctataataatgattgtcgttggtgtcattaaaaagataa 212  Q
    |||||||||||| |||||| ||||||||||||||||| ||||    
T  24005101 tttctataataaagattgttgttggtgtcattaaaaaaataa 24005060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 27904398 - 27904336
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttg 233  Q
    ||||| |||||||| |||||| ||||||||||||||||  | ||||||| ||||||| |||||||    
T  27904398 tttttttataataaagattgttgttggtgtcattaaaa--aaaagaattcagattatattttttg 27904336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 240
Target Start/End: Original strand, 28041416 - 28041496
Alignment:
Q  157 ctctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatct--tttttgttatatt 240  Q
    |||| |||||| ||||||||||||||  ||||| ||||||||||||||||    ||||||||||||||| |  |||||||||||||    
T  28041416 ctcttaaacaactttttctataataaa-attgttgttggtgtcattaaaa----aagaatttagattatattatttttgttatatt 28041496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 43723948 - 43723863
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||||||| |||||| ||||| ||||| || |||||| || |||||||||||||  | | ||||||||||||| | ||||||||||||    
T  43723948 ttatactcttaaacaactttttatataaaaaagattgttgtcggtgtcattaaaa--aaacgaatttagattat-tattttgttatatt 43723863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 48419997 - 48420056
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatt 223  Q
    |||||| |||||||||||||| ||| || |||||||||||| |||||| |||||||||||||    
T  48419997 aaacaactttttctataataaagatcgttgttggtgtcatt-aaaaga-aagaatttagatt 48420056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 240
Target Start/End: Complemental strand, 50944706 - 50944649
Alignment:
Q  184 gattgtcgttggtgtcattaaaaagataagaatttagattatctt-ttttgttatatt 240  Q
    |||||| |||| |||||||||||| | ||||||||||||||| || ||||||||||||    
T  50944706 gattgttgttgatgtcattaaaaaaaaaagaatttagattatattcttttgttatatt 50944649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 52043386 - 52043431
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| |||||||||||||| |||| | |||||||||||||||||    
T  52043386 aaacaactttttctataataaagatttttgttggtgtcattaaaaa 52043431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 8699296 - 8699332
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaa 205  Q
    |||||||||||||| |||||| |||||||||||||||    
T  8699296 tttttctataataaagattgttgttggtgtcattaaa 8699332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 37706082 - 37706024
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttt 231  Q
    ||||||||||||||  ||||| |||||||||||||||||   ||||||||||||||| |||||    
T  37706082 tttttctataataaa-attgttgttggtgtcattaaaaa---aagaatttagattatattttt 37706024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 44667764 - 44667819
Alignment:
Q  184 gattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||| ||||||||||||||||| || | |||| ||||||| ||||||||||||||    
T  44667764 gattgttgttggtgtcattaaaaaaattaaaattcagattat-ttttttgttatatt 44667819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 240
Target Start/End: Original strand, 52402267 - 52402315
Alignment:
Q  192 ttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||||||||||||| ||| ||||||||||| | |||||| |||||||    
T  52402267 ttggtgtcattaaaaaaatatgaatttagatttttttttttattatatt 52402315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 24836764 - 24836852
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||||||| |||||| ||||||||||||||  ||||| ||||||||||||||||| | ||||||||||||||| | ||||||||||||    
T  24836764 ttatactcttaaacaattttttctataataaatattgttgttggtgtcattaaaaaaaaaagaatttagattatatcttttgttatatt 24836852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 42207841 - 42207918
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||| ||||| |||||||| |||||| ||||||||||||||||| ||||||||||||||| | ||||||||||||||    
T  42207841 aacaactttttttataataaagattgttgttggtgtcattaaaaaaataagaatttagatttttttttttgttatatt 42207918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 42919026 - 42918946
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||| | |||| |||||||||||||| |||||| |||||||| |||||||| ||||||||||||||||| ||||||    
T  42919026 ttatactcttacacaactttttctataataaagattgttgttggtgtgattaaaaaaataagaatttagattatatttttt 42918946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 18526944 - 18527007
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    |||||| |||||||||||||| |||||| |||||||||||| |||| |||||||||||||||||    
T  18526944 aaacaactttttctataataaagattgttgttggtgtcattcaaaatataagaatttagattat 18527007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 5769741 - 5769819
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    ||||| ||||||| |||||| |||||| ||||||||||||||||| |||| ||||||||||||  ||||||||||||||    
T  5769741 aacaactttttctttaataaagattgttgttggtgtcattaaaaaaataaaaatttagattatatttttttgttatatt 5769819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 15341781 - 15341851
Alignment:
Q  170 ttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||||||||||| |||||| | ||||| |||||||||||||| ||||||||||||  |||||||||||||    
T  15341781 ttttctataataacgattgttgctggtgacattaaaaagataaaaatttagattataatttttgttatatt 15341851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 25782058 - 25781990
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| ||||||||||||||  ||||| ||||||||||||||||| ||||||||||||||||| ||||||    
T  25782058 aacaattttttctataataaaaattgttgttggtgtcattaaaaa-ataagaatttagattatatttttt 25781990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 38697061 - 38696985
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    |||||| |||||||||||||| |||||| |||||||||||||||||   |||||||||||||||  ||||||||||||||    
T  38697061 aaacaattttttctataataaagattgttgttggtgtcattaaaaa---aagaatttagattatatttttttgttatatt 38696985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 8990368 - 8990440
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatct-tttttgttatatt 240  Q
    |||||||||||||| |||||| ||||||||||||||||| |||||||||||  |||| | |||||||||||||    
T  8990368 tttttctataataaagattgttgttggtgtcattaaaaaaataagaatttaacttatatatttttgttatatt 8990440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 29403105 - 29403041
Alignment:
Q  173 tctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||||||||| |||||| ||||||||| ||||||| |||| |||||||||||| |||||||||||    
T  29403105 tctataataaagattgttgttggtgtcgttaaaaaaataaaaatttagattatattttttgttat 29403041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 39850834 - 39850913
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || ||||||||||||||||||||| |||||| ||||||||||||||||| | |||| |||| ||||| ||||||    
T  39850834 ttatacccttaaacaaatttttctataataaagattgttgttggtgtcattaaaaa-aaaagagtttatattatatttttt 39850913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 17704916 - 17704978
Alignment:
Q  178 aataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||| |||||| |||| |||||||||||| || |||||||||||||| ||||||||||||||    
T  17704916 aataaagattgttgttgttgtcattaaaaaaattagaatttagattatattttttgttatatt 17704978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 240
Target Start/End: Original strand, 41862869 - 41862946
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatct-tttttgttatatt 240  Q
    ||||| |||||||||||||| |||||| ||||| |||||||| || ||||||||||||||||| | |||||||||||||    
T  41862869 aacaactttttctataataaagattgttgttggcgtcattaagaa-ataagaatttagattatatatttttgttatatt 41862946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 28340242 - 28340311
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| ||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||| ||||||    
T  28340242 aacaactttttatattataatgattgttgtttgtgtcattaaaaaaataagaatttaaattatatttttt 28340311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 28766298 - 28766370
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||||||| |||||| |||||||||||||| |||||| |||||||| |||||||| | |||| ||||||||||    
T  28766298 ttatactcttaaacaattttttctataataaagattgttgttggtgtaattaaaaa-aaaagattttagattat 28766370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 27832331 - 27832395
Alignment:
Q  176 ataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||||  ||||| ||| ||||||||||||| ||||||||||| ||||| ||||||||||||||    
T  27832331 ataataaatattgttgttcgtgtcattaaaaaaataagaatttaaattatattttttgttatatt 27832395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 834271 - 834185
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttt-tgttatatt 240  Q
    |||||| || |||||| |||||||||||||| |||||| |||||||||| ||||||   |||||| |||||||| ||||| |||||||||    
T  834271 ttatacccttaaacaactttttctataataaagattgttgttggtgtcagtaaaaa---aagaatctagattatatttttctgttatatt 834185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 232
Target Start/End: Original strand, 936139 - 936202
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||| ||||||||| |||||| |||||||||||| |||| |||| |||||||||||| ||||||    
T  936139 ttttcctataataaagattgttgttggtgtcattcaaaaaataaaaatttagattatatttttt 936202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 224
Target Start/End: Original strand, 1611461 - 1611516
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatta 224  Q
    ||||||||||||||  ||| | ||||||||||||||||| ||||||||||||||||    
T  1611461 tttttctataataaaaattattgttggtgtcattaaaaaaataagaatttagatta 1611516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 7649113 - 7649037
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatta-tcttttttgttatatt 240  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||  | ||||||||| |||| | ||||||||||||||    
T  7649113 aacaactttttctataataaagattgttgttggtgtcattaaaa--aaaagaatttatattatttttttttgttatatt 7649037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 17210565 - 17210620
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| |||||||||||||| |||||| |||||||||||||||||    
T  17210565 ttatacccttaaacaattttttctataataaagattgttgttggtgtcattaaaaa 17210620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 25754636 - 25754550
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttt-ttgttatatt 240  Q
    |||||| || ||| || |||||||||||||| |||||| |||||||||||||||||   ||||||||| ||||| |||| ||||||||||    
T  25754636 ttatacccttaaataactttttctataataaagattgttgttggtgtcattaaaaa---aagaatttaaattatattttgttgttatatt 25754550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 36226466 - 36226521
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| |||||||||||||| |||||| |||||||||||||||||    
T  36226466 ttatacccttaaacaactttttctataataaagattgttgttggtgtcattaaaaa 36226521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 7464173 - 7464099
Alignment:
Q  152 ttatactctaaaacaaatttttctataataat----gattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    |||||| || ||||||||||||||||||||||    |||||| |||||||||||||||||   |||||||||||||||    
T  7464173 ttatacccttaaacaaatttttctataataattaaagattgttgttggtgtcattaaaaa---aagaatttagattat 7464099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 15232258 - 15232196
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||| ||||||||||||||  ||||| ||| |||| |||||||| |||||||||||||||||    
T  15232258 aacaactttttctataataaaaattgttgttagtgttattaaaaaaataagaatttagattat 15232196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 17064994 - 17064948
Alignment:
Q  161 aaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||||| |||||||||||||| |||||| |||||||||||||||||    
T  17064994 aaaacaattttttctataataaagattgttgttggtgtcattaaaaa 17064948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 19128670 - 19128578
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcatta---aaaagataagaatttagattat-cttttttgttatatt 240  Q
    |||||| || |||||| |||||||||||||| ||| || |||||||||||||   |||| | |||||||||||||||  ||||||||||||||    
T  19128670 ttatacccttaaacaactttttctataataaagatcgttgttggtgtcattaaaaaaaaaaaaagaatttagattatatttttttgttatatt 19128578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 8786769 - 8786724
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| |||||||||||||| |||||| |||||||||||||||||    
T  8786769 aaacaactttttctataataaagattgttgttggtgtcattaaaaa 8786724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 1611559 - 1611639
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagat-aagaatttagattatct-tttttgttatatt 240  Q
    |||||| |||||| ||| ||| |||||| ||||||||||||||||| || || |||||||||||| | |||||||||||||    
T  1611559 aaacaactttttccatattaaagattgttgttggtgtcattaaaaaaataaacaatttagattatatatttttgttatatt 1611639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 232
Target Start/End: Original strand, 8839840 - 8839904
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagat-aagaatttagattatctttttt 232  Q
    |||||||||||||| |||||| ||||||||||||||||| || || |||||| ||||| ||||||    
T  8839840 tttttctataataaagattgttgttggtgtcattaaaaaaataaaaaatttacattatatttttt 8839904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 22702283 - 22702366
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcatt-aaaaagataagaatttagattatcttttttgt 234  Q
    |||||| || |||||| ||||||||||| || |||||| |||||||||||| ||| | |  |||||||||||||| ||||||||    
T  22702283 ttatacccttaaacaactttttctataagaaagattgttgttggtgtcattgaaagaaaatagaatttagattatattttttgt 22702366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 40493862 - 40493916
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||||||| |||||| ||||||||||||||  ||||| |||||||||||||||||    
T  40493862 ttatactcttaaacaactttttctataataa-aattgttgttggtgtcattaaaaa 40493916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 42516189 - 42516244
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| ||||||||||||||  ||||| |||||||||||||||||    
T  42516189 ttatacccttaaacaactttttctataataaaaattgttgttggtgtcattaaaaa 42516244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 43370134 - 43370219
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    |||||| || |||||| ||||||||||||||  ||||| |||||||||||| ||||   |||||||||||||||  ||||||||||||||    
T  43370134 ttatacccttaaacaactttttctataataa-aattgttgttggtgtcatttaaaa---aagaatttagattatatttttttgttatatt 43370219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 25793695 - 25793764
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttt-ttgttatatt 240  Q
    |||||||||||||| |||||| ||||||||||||   |||| ||||||||| ||||| |||| ||||||||||    
T  25793695 tttttctataataaagattgttgttggtgtcatt---aagaaaagaatttaaattatattttgttgttatatt 25793764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 832191 - 832236
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| |||||||||||||| |||||| ||||||||||| |||||    
T  832191 aaacaactttttctataataaagattgttgttggtgtcatgaaaaa 832236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 12659414 - 12659357
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaaga 209  Q
    |||||| || |||||| ||||| |||||||| |||||| ||| |||||||||||||||    
T  12659414 ttatacccttaaacaactttttttataataaagattgttgttagtgtcattaaaaaga 12659357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 19650719 - 19650764
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| |||||||||||||| |||||| ||||||| |||||||||    
T  19650719 aaacaactttttctataataaagattgttgttggtgccattaaaaa 19650764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 23206845 - 23206890
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| ||||| |||||||| |||||| |||||||||||||||||    
T  23206845 aaacaactttttttataataaagattgttgttggtgtcattaaaaa 23206890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 32234652 - 32234577
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    |||||| ||||||||||||||  ||||| |||||||||||||| ||   |||||||||||||||  ||||||||||||||    
T  32234652 aaacaactttttctataataaa-attgttgttggtgtcattaacaa---aagaatttagattatatttttttgttatatt 32234577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 37896416 - 37896476
Alignment:
Q  180 taatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    |||| ||||| ||||||||||||||||| |||| ||||||||||||  ||||||||||||||    
T  37896416 taataattgttgttggtgtcattaaaaa-ataaaaatttagattatatttttttgttatatt 37896476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 42027719 - 42027647
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||||||| |||||| |||||||||||||| ||  || |||| ||||||||| || | |||||||||||||||    
T  42027719 ttatactcttaaacaattttttctataataaagaccgttgttgatgtcattaacaa-aaaagaatttagattat 42027647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 1612057 - 1611982
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcatta--aaaagataagaatttagattat 225  Q
    |||||| || |||||| ||||||||| |||| |||||| | |||||||||||  |||| | |||||||||||||||    
T  1612057 ttatacccttaaacaattttttctattataaagattgttgctggtgtcattaaaaaaaaaaaagaatttagattat 1611982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 38180190 - 38180109
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||| || |||||| ||||||||||||||  ||||| |||||||||||| ||||   |||||||||||||   ||||||||||||||    
T  38180190 ttatacccttaaacaattttttctataataa-aattgttgttggtgtcatttaaaa---aagaatttagatt---ttttttgttatatt 38180109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 38190941 - 38191022
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||| || |||||| ||||||||||||||  ||||| |||||||||||| ||||   |||||||||||||   ||||||||||||||    
T  38190941 ttatacccttaaacaattttttctataataa-aattgttgttggtgtcatttaaaa---aagaatttagatt---ttttttgttatatt 38191022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 38207414 - 38207333
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||| || |||||| ||||||||||||||  ||||| |||||||||||| ||||   |||||||||||||   ||||||||||||||    
T  38207414 ttatacccttaaacaattttttctataataa-aattgttgttggtgtcatttaaaa---aagaatttagatt---ttttttgttatatt 38207333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 42097487 - 42097556
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatt 223  Q
    |||||| || |||||| |||||||||||||| |||||  ||||||||| ||||||  | |||||||||||||    
T  42097487 ttatacccttaaacaactttttctataataaagattgatgttggtgtcgttaaaa--aaaagaatttagatt 42097556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 14662397 - 14662319
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttt-tttgttatatt 240  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||| ||||||||||| ||||| ||| |||||||||||    
T  14662397 aacaactttttctataataaagattgttgttggtgtcattaaaaaaataagaatttatattatatttatttgttatatt 14662319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 240
Target Start/End: Original strand, 23124392 - 23124482
Alignment:
Q  151 tttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    ||||| |||| |||||| |||||||| ||||| |||||| ||||||||||||||||| ||||||||||| |||||  ||||||||||||||    
T  23124392 tttattctcttaaacaactttttctaaaataaagattgttgttggtgtcattaaaaaaataagaatttatattataattttttgttatatt 23124482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 29350485 - 29350555
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| ||||||||||||||||||||| |||||||||||| |||| ||||||||||| ||||| ||||||    
T  29350485 aaacaattttttctataataatgattgttgttggtgtcattgaaaatataagaatttaaattatatttttt 29350555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 19146223 - 19146155
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||||||||||| ||||||||||| ||||||||||||   ||||||||||||||| ||||||||||||||    
T  19146223 tttttctataataaagattgtcgttgatgtcattaaaaa---aagaatttagattattttttttgttatatt 19146155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 30591893 - 30591972
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || ||||||||||| |||||||||||||| | |||||||| |||||||||||||||||||| ||||| ||||||    
T  30591893 ttatacccttaaacaaatttt-ctataataatgattattgttggtgtaattaaaaagataagaatttaaattatatttttt 30591972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 163 - 245
Target Start/End: Complemental strand, 8771776 - 8771695
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatattcttcg 245  Q
    ||||| |||||||||||||| |||| | ||||||||||||||||| | ||||||||| ||||| |||||||||||||| ||||    
T  8771776 aacaattttttctataataaagattattgttggtgtcattaaaaa-aaaagaatttacattatattttttgttatattgttcg 8771695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 12169962 - 12169882
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || ||| || |||||||||||||| ||| || ||||||||||||||||| |||||| |||||||||| ||||||    
T  12169962 ttataccctcaaataactttttctataataaagatcgttgttggtgtcattaaaaaaataagagtttagattatatttttt 12169882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 20715849 - 20715918
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||||||||||| |||||| ||||||||||||||||  | ||||||||||||||| ||||||||| ||||    
T  20715849 tttttctataataaagattgttgttggtgtcattaaaa--aaaagaatttagattatattttttgttgtatt 20715918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 235
Target Start/End: Complemental strand, 32333351 - 32333280
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgtt 235  Q
    ||||| |||||| ||||||| |||||| |||||||||||| |||| ||||||||||||||||| |||||||||    
T  32333351 aacaactttttccataataaagattgttgttggtgtcattgaaaa-ataagaatttagattatattttttgtt 32333280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 240
Target Start/End: Original strand, 2485904 - 2485988
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||| || ||||||  |||||||||||||  ||||| |||||||||||||||||   ||||||||||||||| ||||||||||||||    
T  2485904 ttatacccttaaacaatcttttctataataaa-attgttgttggtgtcattaaaaa---aagaatttagattatattttttgttatatt 2485988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 14426641 - 14426723
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaaga-taagaatttagattatcttttttg 233  Q
    ||||||||| |||||| ||||| |||||||| |||||| |||| |||||||||||| | |||||||||| ||||| |||||||    
T  14426641 ttatactcttaaacaactttttatataataaagattgttgttgatgtcattaaaaaaactaagaatttatattatattttttg 14426723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 30233299 - 30233361
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||| ||||||||||| || ||| || ||||||||||||||||| |||||||||||||||||    
T  30233299 aacaattttttctataacaaagatcgttgttggtgtcattaaaaaaataagaatttagattat 30233361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 238
Target Start/End: Original strand, 32531133 - 32531207
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttata 238  Q
    |||||| |||||||||||||| |||||| ||||||||||||| ||  | ||||||||||||| | ||||||||||||    
T  32531133 aaacaactttttctataataaagattgttgttggtgtcattagaa--aaaagaatttagatttttttttttgttata 32531207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 30254415 - 30254343
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    |||||||||||||| |||||| ||| ||||||||||||| ||||||||||| || ||  ||||||||||||||    
T  30254415 tttttctataataaagattgttgtttgtgtcattaaaaaaataagaatttatatcatatttttttgttatatt 30254343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 22535125 - 22535047
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatatt 240  Q
    |||||| ||||||||||||||  ||||| |||||||||| |||||| | |||||||||||||||  ||||||||||||||    
T  22535125 aaacaactttttctataataaatattgttgttggtgtca-taaaaaaaaaagaatttagattatatttttttgttatatt 22535047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 28712058 - 28712003
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| |||||||||||||| |||||| |||||||||||||||||    
T  28712058 ttatacccttaaacaactttttctataataaagattgttgttggtgtcattaaaaa 28712003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 13629286 - 13629366
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || ||| |||||||| |||||||| |||  | ||| ||||||||||||| ||||||||||| ||||| ||||||    
T  13629286 ttatacccttaaagaaatttttttataataaagatcattgttagtgtcattaaaaaaataagaatttaaattatatttttt 13629366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 17353115 - 17353159
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||| |||||||||||||| |||||| |||||||||||||||||    
T  17353115 aacaactttttctataataaagattgttgttggtgtcattaaaaa 17353159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 17942746 - 17942826
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| ||||||||| |||| ||||||  |||||||||||||||| | || ||||||| |||| ||||||    
T  17942746 ttatacccttaaacaactttttctatgataaagattgttattggtgtcattaaaaaaaaaaaaatttaggttatatttttt 17942826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 10460124 - 10460179
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| |||||||||||||| ||| || |||||||||||||||||    
T  10460124 ttatacccttaaacaactttttctataataaagatcgttgttggtgtcattaaaaa 10460179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 22535526 - 22535451
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||| || ||||||||||| ||||||  ||||||||||||| |  | ||||||||||||||| ||||||||||||||    
T  22535526 aaacaatttattctataataaagattgtttttggtgtcattaaga--aaaagaatttagattat-ttttttgttatatt 22535451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 31861843 - 31861913
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    |||||| || |||||| |||||||||||||| ||| ||  ||||||||||||||||   |||||||||||||||    
T  31861843 ttatacccttaaacaactttttctataataaagatcgtttttggtgtcattaaaaa---aagaatttagattat 31861913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 7451777 - 7451732
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| |||||||||||||| |||||| ||||| |||||||||||    
T  7451777 aaacaactttttctataataaagattgttgttggcgtcattaaaaa 7451732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 14965243 - 14965288
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| |||||||||||||| ||| || |||||||||||||||||    
T  14965243 aaacaactttttctataataaagatggttgttggtgtcattaaaaa 14965288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 26251988 - 26251924
Alignment:
Q  179 ataatgattgtcgttggtgtcattaaaaaga--taagaatttagattat-cttttttgttatatt 240  Q
    |||| |||||| ||||||||||||||||| |  ||||||||||||||||  ||||||||||||||    
T  26251988 ataaagattgttgttggtgtcattaaaaaaaaataagaatttagattatatttttttgttatatt 26251924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 26306178 - 26306115
Alignment:
Q  175 tataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||||||||||| |  ||||||||| |||||| |||||| |||||||||| ||||||||||||||    
T  26306178 tataataatgattattattggtgtca-taaaaaaataagactttagattat-ttttttgttatatt 26306115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 31204127 - 31204050
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatta-tcttttttgttata 238  Q
    |||||| |||||||  ||||| |||||| || | |||||||||||| ||||||||||| |||| | ||||||||||||    
T  31204127 aaacaattttttctcaaataaagattgttgtcgatgtcattaaaaatataagaatttatattattattttttgttata 31204050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 33573352 - 33573416
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcatt--aaaaagataagaatttagattat 225  Q
    ||||| |||||||||||||| |||||| ||||||||| ||  ||||| | |||||||||||||||    
T  33573352 aacaattttttctataataaagattgttgttggtgtcgttaaaaaaaaaaaagaatttagattat 33573416  T

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Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 3833948 - 3833900
Alignment:
Q  159 ctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||||||||||||| ||||| ||  ||||| |||||||||||||||||    
T  3833948 ctaaaacaaatttttatataagaaatattgttgttggtgtcattaaaaa 3833900  T

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Target: scaffold0024 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 162 - 240
Target Start/End: Original strand, 44259 - 44338
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctt-ttttgttatatt 240  Q
    |||||| ||||||| |||||| |||||| ||||||||||||||||| | ||||||||||||||| || ||||||||||||    
T  44259 aaacaattttttctgtaataaagattgttgttggtgtcattaaaaaaacaagaatttagattatattcttttgttatatt 44338  T

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Target: scaffold0830 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0830
Description:

Target: scaffold0830; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 719 - 791
Alignment:
Q  169 tttttctataataatgattgtc-gttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||||||||| ||| |||||  |||||||||||||||||||||  | |||||||||| ||||||||||||||    
T  719 tttttctataacaataattgtttgttggtgtcattaaaaagatataattttagattattttttttgttatatt 791  T

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Target: scaffold0734 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 4097 - 4025
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctt-ttttgttatatt 240  Q
    |||||||||||||| |||||| ||   |||||||||||| ||||||||||||||||| || ||||||||||||    
T  4097 tttttctataataaagattgttgtcaatgtcattaaaaaaataagaatttagattatattcttttgttatatt 4025  T

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Target: scaffold0268 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 232
Target Start/End: Original strand, 21608 - 21672
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcatt-aaaaagataagaatttagattatctttttt 232  Q
    |||||||||||||| |||||| ||||||||| || ||||| ||||||||||||||||| ||||||    
T  21608 tttttctataataaagattgttgttggtgtcgttaaaaaaaataagaatttagattatatttttt 21672  T

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Target: scaffold0649 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0649
Description:

Target: scaffold0649; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 239
Target Start/End: Complemental strand, 8490 - 8419
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttt-tgttatat 239  Q
    ||||||||||||||  | | | ||||||||||||||||| ||||||||||||||||| ||||| ||||||||    
T  8490 tttttctataataaataatattgttggtgtcattaaaaaaataagaatttagattatatttttgtgttatat 8419  T

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Target: scaffold0037 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 57109 - 57178
Alignment:
Q  170 ttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||||||||||| |||||| |||  ||| |||||||| |||||| |||||||||| ||||||||||||||    
T  57109 ttttctataataaagattgttgttattgttattaaaaa-ataagagtttagattatattttttgttatatt 57178  T

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Target: scaffold0037; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 64234 - 64303
Alignment:
Q  170 ttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||||||||||| |||||| |||  ||| |||||||| |||||| |||||||||| ||||||||||||||    
T  64234 ttttctataataaagattgttgttattgttattaaaaa-ataagagtttagattatattttttgttatatt 64303  T

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Target: scaffold0118 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 14765 - 14825
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttt 230  Q
    |||||||||||||| |||||| |||| |||||||||||| |||| |||||||||||| ||||    
T  14765 tttttctataataaagattgttgttgatgtcattaaaaa-ataaaaatttagattatatttt 14825  T

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Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 240
Target Start/End: Complemental strand, 4053 - 3964
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatt-atcttttttgttatatt 240  Q
    ||||||| | |||||| ||||||||||||||  |||||  ||| |||||||||||| |||| |||||||||| |  ||||||||||||||    
T  4053 ttatacttttaaacaactttttctataataaatattgttattgatgtcattaaaaaaataaaaatttagattaaatttttttgttatatt 3964  T

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Target: scaffold0196 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 8765 - 8690
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    |||||| |||||||||||||| |||||| |||| | |||||||||  | || |||||||||||| ||||||||||||||    
T  8765 aaacaattttttctataataaagattgttgttgatttcattaaaa--aaaaaaatttagattat-ttttttgttatatt 8690  T

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Target: scaffold0137 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 6988 - 6922
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| |||||||||| ||| |||||| ||||| |||||||||||   ||||||||||||||| ||||||    
T  6988 aacaattttttctatagtaaagattgttgttggcgtcattaaaaa---aagaatttagattatatttttt 6922  T

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Target: scaffold0293 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 240
Target Start/End: Original strand, 4059 - 4127
Alignment:
Q  170 ttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatatt 240  Q
    ||||||||||||| |||| | |||  ||| |||||||| ||||||||||||||||| ||||||||||||||    
T  4059 ttttctataataaagatttt-gttattgttattaaaaa-ataagaatttagattatattttttgttatatt 4127  T

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Target: scaffold0193 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 240
Target Start/End: Complemental strand, 21577 - 21499
Alignment:
Q  164 acaaatttttctataataatgattgtcgttggtgtcattaaaaaga-taagaatttagattat-cttttttgttatatt 240  Q
    |||| ||||||||||| ||  ||||| ||||||| ||||||||| | ||||||||||||||||  ||||||||||||||    
T  21577 acaactttttctataaaaaaaattgttgttggtgccattaaaaaaaataagaatttagattatatttttttgttatatt 21499  T

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Target: scaffold0013 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 41602 - 41533
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatt-atcttttttgttatatt 240  Q
    |||||||||||||| |||||| |||| ||||||||||||   |||||||| |||| || ||||||||||||||    
T  41602 tttttctataataaagattgttgttgttgtcattaaaaa---aagaatttggattaattttttttgttatatt 41533  T

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Target: scaffold0707 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 440 - 376
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcatt--aaaaagataagaatttagattat 225  Q
    ||||| |||||||||||||| |||||| ||||||||| ||  ||||| | |||||||||||||||    
T  440 aacaattttttctataataaagattgttgttggtgtcgttaaaaaaaaaaaagaatttagattat 376  T

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Target: scaffold0445 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 4839 - 4884
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| |||||||||||||| |||||| |||||||||| ||||||    
T  4839 aaacaattttttctataataaagattgttgttggtgtcaataaaaa 4884  T

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