View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3447_low_33 (Length: 238)
Name: NF3447_low_33
Description: NF3447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3447_low_33 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 18 - 238
Target Start/End: Original strand, 44696802 - 44697022
Alignment:
| Q |
18 |
gaataaggtatatacactaaactaagctatgccaaccctacactacgatacaatacagtactaccttatcaagaaacatgtttggtaaatgataaagaag |
117 |
Q |
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| T |
44696802 |
gaataaggtatatacacttaactaagctatgccaaccctacactacgatacaatacagtactaccttatcaagaaacatgtttggtaaatgataaagaag |
44696901 |
T |
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| Q |
118 |
ggtgggtttactttcacccttttatggaacgccatgcttttccactgttgttaacccacaatggcattttcacacctataggctacactagtctttcact |
217 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44696902 |
ggtgggtttactttcacccttttatggaacgccatgtttttccactgttgttaacccacaatggcattttcacacctataggctacactagtctttcact |
44697001 |
T |
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| Q |
218 |
actattggacctttattcctt |
238 |
Q |
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||||||||||||||||||||| |
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| T |
44697002 |
actattggacctttattcctt |
44697022 |
T |
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