View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3447_low_7 (Length: 518)

Name: NF3447_low_7
Description: NF3447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3447_low_7
NF3447_low_7
[»] chr2 (76 HSPs)
chr2 (308-518)||(19886499-19886709)
chr2 (1-258)||(24826229-24826488)
chr2 (1-218)||(28775332-28775550)
chr2 (1-258)||(19886192-19886449)
chr2 (1-228)||(25213564-25213793)
chr2 (1-218)||(11230861-11231081)
chr2 (1-218)||(24685305-24685524)
chr2 (1-228)||(42177495-42177725)
chr2 (1-218)||(22512708-22512928)
chr2 (1-179)||(23777572-23777754)
chr2 (1-148)||(21142456-21142603)
chr2 (5-179)||(7507371-7507548)
chr2 (1-148)||(5888167-5888315)
chr2 (334-496)||(11231205-11231368)
chr2 (334-496)||(22513052-22513215)
chr2 (334-496)||(24685648-24685811)
chr2 (334-496)||(28775674-28775837)
chr2 (4-175)||(22256429-22256604)
chr2 (1-179)||(17204900-17205083)
chr2 (343-518)||(12728596-12728772)
chr2 (4-114)||(19688941-19689051)
chr2 (385-518)||(23777963-23778097)
chr2 (343-518)||(8944050-8944226)
chr2 (343-518)||(34824679-34824855)
chr2 (343-518)||(42177845-42178021)
chr2 (380-518)||(3798516-3798655)
chr2 (1-120)||(33128680-33128799)
chr2 (35-175)||(28030780-28030924)
chr2 (343-518)||(16935797-16935973)
chr2 (343-518)||(17006457-17006633)
chr2 (385-518)||(12641560-12641694)
chr2 (4-114)||(23774751-23774861)
chr2 (4-175)||(22284537-22284713)
chr2 (343-518)||(12635744-12635920)
chr2 (308-416)||(24826538-24826646)
chr2 (45-169)||(22275310-22275438)
chr2 (1-115)||(16936192-16936308)
chr2 (1-115)||(17006852-17006968)
chr2 (3-114)||(21918652-21918763)
chr2 (1-93)||(12635406-12635498)
chr2 (30-114)||(17396219-17396303)
chr2 (343-488)||(23774370-23774516)
chr2 (1-93)||(8944472-8944564)
chr2 (1-93)||(12641182-12641274)
chr2 (1-93)||(12729018-12729110)
chr2 (1-93)||(34825101-34825193)
chr2 (1-93)||(38703962-38704054)
chr2 (1-93)||(3798141-3798233)
chr2 (1-93)||(21273569-21273661)
chr2 (385-488)||(5888548-5888652)
chr2 (431-518)||(21142099-21142187)
chr2 (1-64)||(25420014-25420077)
chr2 (123-179)||(16936142-16936200)
chr2 (123-179)||(17006802-17006860)
chr2 (4-114)||(2155312-2155425)
chr2 (343-416)||(25213372-25213446)
chr2 (45-114)||(24086980-24087052)
chr2 (35-114)||(22762808-22762888)
chr2 (470-518)||(25265402-25265450)
chr2 (45-98)||(2771-2826)
chr2 (35-77)||(29115034-29115076)
chr2 (161-229)||(21918533-21918601)
chr2 (161-228)||(17396354-17396421)
chr2 (161-228)||(19689102-19689169)
chr2 (161-228)||(23774633-23774700)
chr2 (35-78)||(24885327-24885370)
chr2 (473-518)||(19794719-19794764)
chr2 (470-518)||(462941-462989)
chr2 (470-518)||(8891445-8891493)
chr2 (470-518)||(14906452-14906500)
chr2 (35-97)||(19668653-19668717)
chr2 (470-518)||(19689413-19689461)
chr2 (470-518)||(23820274-23820322)
chr2 (10-88)||(24294012-24294092)
chr2 (10-120)||(25875429-25875541)
chr2 (470-518)||(36982453-36982501)
[»] chr5 (81 HSPs)
chr5 (308-516)||(21073433-21073641)
chr5 (308-518)||(12578-12788)
chr5 (1-258)||(22366010-22366268)
chr5 (1-258)||(43442928-43443186)
chr5 (1-258)||(25427075-25427333)
chr5 (1-258)||(4199515-4199773)
chr5 (308-518)||(18777830-18778040)
chr5 (1-229)||(29187816-29188044)
chr5 (308-518)||(19500103-19500312)
chr5 (308-518)||(22366318-22366529)
chr5 (308-518)||(4199823-4200033)
chr5 (308-518)||(25426832-25427042)
chr5 (5-258)||(21073126-21073383)
chr5 (308-518)||(29188123-29188332)
chr5 (1-229)||(18777517-18777748)
chr5 (308-518)||(43443236-43443443)
chr5 (1-229)||(23542794-23543024)
chr5 (1-218)||(17471114-17471334)
chr5 (1-228)||(21931925-21932155)
chr5 (1-228)||(21938095-21938325)
chr5 (21-199)||(22882629-22882808)
chr5 (1-258)||(12838-13095)
chr5 (1-218)||(10777495-10777715)
chr5 (1-228)||(16106162-16106394)
chr5 (1-246)||(19500373-19500602)
chr5 (314-518)||(10777816-10778022)
chr5 (318-518)||(27010045-27010244)
chr5 (1-218)||(35582549-35582769)
chr5 (1-218)||(36989293-36989513)
chr5 (318-500)||(7425546-7425729)
chr5 (308-496)||(21932220-21932411)
chr5 (308-496)||(21938390-21938581)
chr5 (334-496)||(35582262-35582425)
chr5 (342-518)||(11211940-11212117)
chr5 (334-496)||(22882951-22883114)
chr5 (1-147)||(9729883-9730030)
chr5 (5-179)||(17910061-17910239)
chr5 (1-179)||(34939833-34940014)
chr5 (334-496)||(36989637-36989800)
chr5 (5-179)||(23515110-23515287)
chr5 (343-518)||(35790974-35791150)
chr5 (318-518)||(17471438-17471640)
chr5 (343-518)||(23514765-23514941)
chr5 (343-496)||(1219396-1219550)
chr5 (1-114)||(7425941-7426054)
chr5 (35-175)||(7529473-7529617)
chr5 (1-93)||(11343332-11343424)
chr5 (1-93)||(1219058-1219150)
chr5 (1-93)||(24713164-24713256)
chr5 (343-488)||(23328791-23328937)
chr5 (343-488)||(24616395-24616541)
chr5 (343-488)||(24712771-24712917)
chr5 (343-488)||(24745789-24745935)
chr5 (1-93)||(23329183-23329275)
chr5 (1-93)||(24616923-24617015)
chr5 (1-93)||(24746182-24746274)
chr5 (308-416)||(11343008-11343118)
chr5 (35-114)||(3674513-3674594)
chr5 (4-114)||(21222120-21222233)
chr5 (470-518)||(34939480-34939528)
chr5 (161-227)||(108500-108566)
chr5 (308-416)||(16105967-16106077)
chr5 (45-114)||(7729070-7729142)
chr5 (35-114)||(32965256-32965337)
chr5 (161-229)||(11343202-11343270)
chr5 (470-518)||(18531079-18531127)
chr5 (10-114)||(24224863-24224971)
chr5 (161-228)||(1219212-1219279)
chr5 (161-228)||(23329054-23329121)
chr5 (45-114)||(23467083-23467154)
chr5 (161-228)||(35790791-35790858)
chr5 (35-111)||(28902845-28902923)
chr5 (35-111)||(28939240-28939318)
chr5 (45-128)||(21646282-21646367)
chr5 (45-78)||(37984033-37984066)
chr5 (470-518)||(20623172-20623220)
chr5 (470-518)||(21233540-21233588)
chr5 (470-518)||(22053845-22053893)
chr5 (470-518)||(23507168-23507216)
chr5 (470-518)||(25900418-25900466)
chr5 (470-518)||(37052947-37052995)
[»] chr6 (82 HSPs)
chr6 (1-246)||(16814530-16814775)
chr6 (1-228)||(16375919-16376147)
chr6 (1-228)||(16383243-16383471)
chr6 (1-258)||(27653513-27653771)
chr6 (308-518)||(27653821-27654031)
chr6 (1-229)||(14625657-14625886)
chr6 (1-229)||(25951546-25951774)
chr6 (1-218)||(10489212-10489432)
chr6 (1-218)||(16555658-16555877)
chr6 (1-218)||(16632214-16632433)
chr6 (32-218)||(19299750-19299937)
chr6 (318-518)||(25175767-25175968)
chr6 (1-228)||(22225262-22225492)
chr6 (1-228)||(22251090-22251320)
chr6 (2-228)||(15862981-15863211)
chr6 (1-228)||(1657270-1657501)
chr6 (1-228)||(4991576-4991806)
chr6 (308-496)||(16376212-16376403)
chr6 (308-496)||(16383536-16383727)
chr6 (396-518)||(16825678-16825800)
chr6 (318-518)||(16232096-16232297)
chr6 (334-496)||(10488925-10489088)
chr6 (1-175)||(18822894-18823072)
chr6 (1-175)||(18838757-18838935)
chr6 (317-518)||(22251415-22251618)
chr6 (1-178)||(1556555-1556735)
chr6 (334-496)||(16556006-16556169)
chr6 (334-496)||(16632562-16632725)
chr6 (317-518)||(22225587-22225790)
chr6 (1-147)||(9276515-9276662)
chr6 (334-492)||(19299467-19299626)
chr6 (35-179)||(15741769-15741916)
chr6 (385-518)||(1650022-1650153)
chr6 (308-518)||(14625968-14626178)
chr6 (318-518)||(18086674-18086875)
chr6 (1-114)||(16232507-16232620)
chr6 (1-114)||(19610632-19610745)
chr6 (318-488)||(29869627-29869798)
chr6 (35-148)||(12415391-12415505)
chr6 (343-496)||(19610244-19610398)
chr6 (343-518)||(1556209-1556385)
chr6 (343-518)||(23977973-23978149)
chr6 (1-115)||(16299513-16299629)
chr6 (1-115)||(19629925-19630041)
chr6 (1-93)||(25898642-25898734)
chr6 (385-518)||(13620712-13620846)
chr6 (1-93)||(9477994-9478086)
chr6 (1-115)||(16240633-16240749)
chr6 (1-93)||(23978395-23978487)
chr6 (309-401)||(16814837-16814930)
chr6 (1-93)||(23995567-23995659)
chr6 (1-83)||(29869313-29869395)
chr6 (1-88)||(26090357-26090443)
chr6 (10-120)||(18002020-18002133)
chr6 (123-179)||(19629875-19629933)
chr6 (389-518)||(29666077-29666208)
chr6 (123-179)||(16299621-16299679)
chr6 (343-416)||(4991396-4991470)
chr6 (472-518)||(15862674-15862720)
chr6 (470-518)||(1657760-1657808)
chr6 (45-115)||(14152935-14153007)
chr6 (4-114)||(22361249-22361361)
chr6 (470-518)||(35009451-35009499)
chr6 (471-518)||(27751628-27751675)
chr6 (35-114)||(18381328-18381409)
chr6 (161-228)||(16232389-16232456)
chr6 (10-98)||(16887309-16887400)
chr6 (161-228)||(19610514-19610581)
chr6 (35-78)||(21931871-21931914)
chr6 (161-228)||(25898797-25898864)
chr6 (35-78)||(34967533-34967576)
chr6 (472-518)||(23153650-23153696)
chr6 (161-218)||(9478148-9478205)
chr6 (45-112)||(21623824-21623893)
chr6 (45-78)||(22582324-22582357)
chr6 (45-78)||(22585114-22585147)
chr6 (45-78)||(22589945-22589978)
chr6 (161-218)||(29869467-29869524)
chr6 (45-88)||(14128816-14128860)
chr6 (149-228)||(16240533-16240613)
chr6 (48-150)||(18433241-18433345)
chr6 (48-114)||(18629137-18629205)
[»] scaffold0782 (1 HSPs)
scaffold0782 (1-258)||(21-280)
[»] chr7 (74 HSPs)
chr7 (1-228)||(7823210-7823438)
chr7 (1-228)||(7830521-7830749)
chr7 (1-228)||(27176915-27177143)
chr7 (1-258)||(13910554-13910812)
chr7 (1-198)||(12899825-12900023)
chr7 (308-518)||(13910862-13911072)
chr7 (4-240)||(10989895-10990130)
chr7 (1-258)||(16478494-16478751)
chr7 (1-218)||(27101160-27101380)
chr7 (1-199)||(26009669-26009868)
chr7 (314-518)||(16478808-16479010)
chr7 (1-228)||(15950318-15950548)
chr7 (311-518)||(10989613-10989821)
chr7 (308-518)||(2437661-2437873)
chr7 (1-228)||(14250425-14250655)
chr7 (1-228)||(2437960-2438190)
chr7 (318-518)||(13572880-13573079)
chr7 (1-228)||(15516384-15516603)
chr7 (1-218)||(27108508-27108728)
chr7 (1-218)||(38783252-38783472)
chr7 (1-148)||(16419078-16419226)
chr7 (308-496)||(7822954-7823145)
chr7 (308-496)||(7830265-7830456)
chr7 (308-496)||(27176659-27176850)
chr7 (318-518)||(18979872-18980073)
chr7 (334-496)||(27101504-27101667)
chr7 (334-496)||(27108852-27109015)
chr7 (334-496)||(38783596-38783759)
chr7 (1-178)||(15759640-15759820)
chr7 (1-179)||(47480551-47480733)
chr7 (1-179)||(18253371-18253554)
chr7 (1-148)||(48622203-48622351)
chr7 (1-147)||(371693-371840)
chr7 (318-518)||(15927772-15927973)
chr7 (318-518)||(15950641-15950843)
chr7 (1-114)||(15928185-15928298)
chr7 (343-518)||(15759990-15760166)
chr7 (343-518)||(13758574-13758750)
chr7 (41-228)||(15862413-15862603)
chr7 (385-518)||(18253761-18253895)
chr7 (1-88)||(10264288-10264375)
chr7 (385-467)||(15862174-15862257)
chr7 (1-93)||(13758996-13759088)
chr7 (380-518)||(14250811-14250950)
chr7 (1-93)||(48756727-48756819)
chr7 (385-518)||(48622584-48622718)
chr7 (385-488)||(16418731-16418835)
chr7 (19-93)||(42055826-42055900)
chr7 (385-488)||(10000288-10000392)
chr7 (1-64)||(9999920-9999983)
chr7 (470-518)||(13321219-13321267)
chr7 (4-113)||(16920188-16920300)
chr7 (470-518)||(47481043-47481091)
chr7 (32-87)||(17223503-17223558)
chr7 (342-416)||(15516719-15516793)
chr7 (78-154)||(45451740-45451820)
chr7 (161-227)||(2189858-2189924)
chr7 (4-110)||(9081260-9081369)
chr7 (35-114)||(14268415-14268496)
chr7 (48-114)||(12247650-12247718)
chr7 (470-518)||(13037026-13037074)
chr7 (470-518)||(16211969-16212017)
chr7 (48-114)||(16569536-16569604)
chr7 (48-114)||(16596058-16596126)
chr7 (161-228)||(7293509-7293576)
chr7 (36-97)||(13378171-13378234)
chr7 (4-114)||(16914437-16914551)
chr7 (45-78)||(46474631-46474664)
chr7 (470-518)||(11516430-11516478)
chr7 (470-518)||(11580751-11580799)
chr7 (78-114)||(13321638-13321674)
chr7 (470-518)||(15441576-15441624)
chr7 (470-518)||(30262141-30262189)
chr7 (48-114)||(48357267-48357335)
[»] chr8 (68 HSPs)
chr8 (1-229)||(24549473-24549701)
chr8 (1-246)||(30121197-30121443)
chr8 (1-229)||(17142556-17142786)
chr8 (314-518)||(24549185-24549387)
chr8 (308-517)||(30120927-30121137)
chr8 (314-518)||(21851810-21852013)
chr8 (1-229)||(6773793-6774021)
chr8 (314-518)||(6774105-6774306)
chr8 (1-229)||(21844103-21844330)
chr8 (1-229)||(21851496-21851723)
chr8 (314-518)||(21844417-21844620)
chr8 (1-218)||(15318682-15318902)
chr8 (1-218)||(15499051-15499271)
chr8 (1-218)||(22088317-22088537)
chr8 (1-228)||(22005783-22006014)
chr8 (5-179)||(13661792-13661969)
chr8 (5-179)||(13720455-13720632)
chr8 (1-218)||(270883-271103)
chr8 (1-218)||(644817-645037)
chr8 (1-218)||(830552-830772)
chr8 (1-179)||(18612952-18613134)
chr8 (1-179)||(22147994-22148176)
chr8 (1-147)||(3430786-3430932)
chr8 (334-496)||(271227-271390)
chr8 (334-496)||(644530-644693)
chr8 (334-496)||(830265-830428)
chr8 (334-495)||(15319026-15319188)
chr8 (334-495)||(15499395-15499557)
chr8 (321-517)||(16674245-16674439)
chr8 (1-179)||(2545503-2545685)
chr8 (1-179)||(16038397-16038579)
chr8 (334-496)||(22088661-22088824)
chr8 (343-518)||(22006134-22006310)
chr8 (343-518)||(13720804-13720980)
chr8 (1-228)||(16195730-16195950)
chr8 (343-496)||(13662141-13662295)
chr8 (343-518)||(16195435-16195611)
chr8 (5-114)||(22906756-22906865)
chr8 (380-518)||(16872964-16873103)
chr8 (4-175)||(21493967-21494143)
chr8 (1-104)||(24105735-24105840)
chr8 (1-93)||(16878261-16878353)
chr8 (1-87)||(17346179-17346265)
chr8 (1-75)||(17353186-17353260)
chr8 (23-93)||(33532714-33532784)
chr8 (1-80)||(23511875-23511955)
chr8 (5-92)||(984211-984298)
chr8 (123-228)||(17346078-17346186)
chr8 (4-114)||(23837851-23837964)
chr8 (39-114)||(39446286-39446364)
chr8 (10-110)||(38534304-38534407)
chr8 (470-518)||(16404987-16405035)
chr8 (474-518)||(17345772-17345816)
chr8 (35-78)||(45558478-45558521)
chr8 (59-93)||(16872648-16872682)
chr8 (35-115)||(17285856-17285938)
chr8 (50-114)||(21197682-21197748)
chr8 (464-518)||(43373474-43373528)
chr8 (4-114)||(5855235-5855348)
chr8 (161-218)||(16872744-16872801)
chr8 (35-80)||(22723780-22723825)
chr8 (35-98)||(29307085-29307150)
chr8 (470-518)||(5238290-5238338)
chr8 (470-518)||(16193728-16193776)
chr8 (470-518)||(22907226-22907274)
chr8 (470-518)||(24661260-24661308)
chr8 (470-518)||(24928803-24928851)
chr8 (470-518)||(43685749-43685797)
[»] chr4 (65 HSPs)
chr4 (1-179)||(27954590-27954768)
chr4 (1-229)||(10644711-10644940)
chr4 (314-518)||(10644423-10644625)
chr4 (1-216)||(18169480-18169698)
chr4 (1-199)||(37477685-37477886)
chr4 (1-218)||(41063517-41063734)
chr4 (1-228)||(7131592-7131822)
chr4 (1-228)||(14996634-14996863)
chr4 (1-179)||(9795773-9795954)
chr4 (1-148)||(8378747-8378894)
chr4 (1-179)||(19021031-19021213)
chr4 (1-179)||(19696891-19697073)
chr4 (1-179)||(19707476-19707658)
chr4 (1-156)||(26680771-26680926)
chr4 (343-518)||(47357858-47358030)
chr4 (1-175)||(16523389-16523567)
chr4 (318-496)||(15287096-15287275)
chr4 (318-496)||(15294205-15294384)
chr4 (318-518)||(18169174-18169375)
chr4 (1-122)||(18248805-18248927)
chr4 (1-114)||(22351592-22351705)
chr4 (318-488)||(22351915-22352086)
chr4 (1-114)||(15293882-15293995)
chr4 (1-111)||(15286773-15286883)
chr4 (343-518)||(7131941-7132117)
chr4 (343-518)||(20000927-20001103)
chr4 (35-169)||(14499755-14499893)
chr4 (385-518)||(18248422-18248556)
chr4 (385-518)||(19020690-19020824)
chr4 (1-114)||(14952392-14952505)
chr4 (380-496)||(17145570-17145687)
chr4 (1-114)||(26339634-26339747)
chr4 (394-496)||(8378377-8378480)
chr4 (343-488)||(26339253-26339399)
chr4 (1-93)||(20001349-20001441)
chr4 (1-93)||(54047385-54047477)
chr4 (1-93)||(15271831-15271923)
chr4 (423-518)||(22738473-22738568)
chr4 (318-416)||(14952085-14952183)
chr4 (385-459)||(9795490-9795564)
chr4 (105-169)||(32460317-32460384)
chr4 (4-87)||(47534563-47534647)
chr4 (4-87)||(32460243-32460326)
chr4 (50-116)||(12244413-12244482)
chr4 (343-417)||(14996444-14996518)
chr4 (10-97)||(18493627-18493717)
chr4 (470-518)||(15675101-15675149)
chr4 (470-518)||(33240903-33240951)
chr4 (161-228)||(14952275-14952342)
chr4 (161-228)||(22351756-22351823)
chr4 (161-228)||(26339516-26339583)
chr4 (161-215)||(15135676-15135730)
chr4 (4-114)||(18277057-18277171)
chr4 (385-418)||(8378491-8378524)
chr4 (35-80)||(12133151-12133196)
chr4 (10-97)||(37956529-37956618)
chr4 (470-518)||(122092-122140)
chr4 (10-150)||(819433-819577)
chr4 (145-181)||(7850543-7850579)
chr4 (470-518)||(10104262-10104310)
chr4 (470-518)||(10488765-10488813)
chr4 (470-518)||(16327938-16327986)
chr4 (470-518)||(26680403-26680451)
chr4 (48-130)||(30458524-30458608)
chr4 (470-518)||(54118256-54118304)
[»] scaffold0376 (1 HSPs)
scaffold0376 (1-178)||(1-178)
[»] scaffold0247 (1 HSPs)
scaffold0247 (1-184)||(23133-23316)
[»] scaffold0023 (9 HSPs)
scaffold0023 (1-246)||(36568-36814)
scaffold0023 (308-518)||(36297-36507)
scaffold0023 (1-240)||(169436-169677)
scaffold0023 (308-509)||(169748-169951)
scaffold0023 (4-218)||(330-547)
scaffold0023 (1-228)||(153532-153763)
scaffold0023 (1-179)||(60730-60912)
scaffold0023 (343-518)||(153883-154059)
scaffold0023 (470-518)||(48801-48849)
[»] scaffold0008 (3 HSPs)
scaffold0008 (1-229)||(31203-31432)
scaffold0008 (308-518)||(31513-31723)
scaffold0008 (470-518)||(128181-128229)
[»] scaffold0076 (4 HSPs)
scaffold0076 (1-229)||(43490-43718)
scaffold0076 (314-518)||(43201-43404)
scaffold0076 (1-218)||(39616-39836)
scaffold0076 (334-496)||(39329-39492)
[»] scaffold0213 (3 HSPs)
scaffold0213 (1-229)||(29690-29919)
scaffold0213 (327-496)||(29388-29558)
scaffold0213 (314-353)||(29565-29604)
[»] scaffold0191 (2 HSPs)
scaffold0191 (1-227)||(6983-7211)
scaffold0191 (318-518)||(7306-7508)
[»] chr1 (53 HSPs)
chr1 (1-199)||(22238326-22238525)
chr1 (1-228)||(18059285-18059512)
chr1 (1-228)||(22228308-22228538)
chr1 (1-229)||(17149065-17149294)
chr1 (1-228)||(38054637-38054865)
chr1 (32-218)||(19962055-19962242)
chr1 (318-518)||(5072237-5072436)
chr1 (1-218)||(17005151-17005371)
chr1 (308-518)||(18059597-18059810)
chr1 (334-496)||(17004864-17005027)
chr1 (308-518)||(17148771-17148985)
chr1 (35-228)||(15860966-15861162)
chr1 (346-518)||(22228012-22228185)
chr1 (346-518)||(22232709-22232882)
chr1 (1-148)||(20254902-20255051)
chr1 (334-492)||(19962366-19962525)
chr1 (334-500)||(38054958-38055125)
chr1 (1-105)||(24521997-24522101)
chr1 (385-518)||(2116458-2116589)
chr1 (385-518)||(45051626-45051757)
chr1 (380-518)||(46523593-46523731)
chr1 (1-114)||(24568272-24568385)
chr1 (423-518)||(18601071-18601166)
chr1 (1-91)||(42443119-42443209)
chr1 (1-114)||(7640463-7640576)
chr1 (1-114)||(46523993-46524106)
chr1 (343-488)||(22035681-22035827)
chr1 (101-228)||(22233005-22233135)
chr1 (1-93)||(22036072-22036164)
chr1 (343-488)||(7640810-7640956)
chr1 (1-93)||(13583355-13583447)
chr1 (4-114)||(17023628-17023740)
chr1 (35-114)||(16646562-16646643)
chr1 (10-114)||(37233345-37233452)
chr1 (342-416)||(15861284-15861358)
chr1 (1-57)||(29139585-29139641)
chr1 (1-67)||(21654603-21654670)
chr1 (4-116)||(20177799-20177914)
chr1 (35-116)||(27675419-27675502)
chr1 (10-97)||(51627183-51627273)
chr1 (48-114)||(17609552-17609620)
chr1 (470-518)||(20913233-20913281)
chr1 (470-518)||(20931548-20931596)
chr1 (161-228)||(18595525-18595592)
chr1 (45-98)||(19603774-19603829)
chr1 (35-111)||(16657292-16657370)
chr1 (10-110)||(27329256-27329358)
chr1 (35-77)||(41219378-41219420)
chr1 (35-80)||(75960-76005)
chr1 (161-230)||(45051902-45051971)
chr1 (86-150)||(49968250-49968315)
chr1 (470-518)||(20445882-20445930)
chr1 (470-518)||(20893638-20893686)
[»] scaffold0420 (2 HSPs)
scaffold0420 (314-518)||(13171-13373)
scaffold0420 (1-98)||(7709-7806)
[»] scaffold0467 (2 HSPs)
scaffold0467 (1-228)||(8497-8725)
scaffold0467 (385-518)||(10257-10391)
[»] chr3 (74 HSPs)
chr3 (4-218)||(15467883-15468100)
chr3 (1-218)||(16821646-16821866)
chr3 (318-518)||(41270279-41270478)
chr3 (318-518)||(55316423-55316622)
chr3 (1-258)||(27840690-27840947)
chr3 (1-218)||(49232949-49233169)
chr3 (4-228)||(25059239-25059466)
chr3 (1-228)||(18911492-18911722)
chr3 (1-180)||(15936162-15936344)
chr3 (1-179)||(14842096-14842277)
chr3 (334-518)||(49232640-49232825)
chr3 (13-179)||(9302664-9302834)
chr3 (4-218)||(1467265-1467482)
chr3 (334-496)||(1467606-1467769)
chr3 (308-518)||(12264630-12264844)
chr3 (1-179)||(12901621-12901803)
chr3 (318-496)||(22275435-22275615)
chr3 (1-179)||(15938004-15938185)
chr3 (1-179)||(11476706-11476888)
chr3 (334-492)||(12812071-12812230)
chr3 (342-518)||(16821343-16821517)
chr3 (343-518)||(15468216-15468392)
chr3 (343-518)||(25058943-25059119)
chr3 (4-175)||(14285534-14285710)
chr3 (1-228)||(22275707-22275928)
chr3 (1-111)||(12257337-12257447)
chr3 (385-518)||(15615037-15615168)
chr3 (1-148)||(44229566-44229718)
chr3 (1-147)||(16933478-16933626)
chr3 (343-518)||(18911197-18911373)
chr3 (104-227)||(30153463-30153587)
chr3 (1-114)||(8275360-8275473)
chr3 (343-518)||(18896920-18897096)
chr3 (4-114)||(8268263-8268373)
chr3 (385-518)||(12902008-12902142)
chr3 (343-500)||(5228535-5228692)
chr3 (385-518)||(15936553-15936687)
chr3 (1-120)||(23492988-23493109)
chr3 (30-114)||(13954456-13954540)
chr3 (30-114)||(45861418-45861502)
chr3 (1-88)||(17062196-17062283)
chr3 (112-227)||(12264428-12264545)
chr3 (385-518)||(15938395-15938529)
chr3 (385-518)||(54651661-54651795)
chr3 (1-93)||(53771685-53771777)
chr3 (385-518)||(44229189-44229323)
chr3 (343-518)||(14842446-14842621)
chr3 (32-114)||(16880763-16880847)
chr3 (10-114)||(11060498-11060605)
chr3 (37-114)||(11881736-11881815)
chr3 (10-116)||(3575951-3576060)
chr3 (35-114)||(19306431-19306512)
chr3 (45-114)||(40939776-40939847)
chr3 (343-417)||(8268609-8268683)
chr3 (343-417)||(8275709-8275783)
chr3 (470-518)||(12030159-12030207)
chr3 (35-113)||(12032164-12032244)
chr3 (470-518)||(13839097-13839145)
chr3 (470-518)||(15859036-15859084)
chr3 (470-518)||(51158030-51158078)
chr3 (45-92)||(55440396-55440444)
chr3 (1-48)||(14219157-14219204)
chr3 (161-228)||(16743810-16743877)
chr3 (45-120)||(17912047-17912122)
chr3 (10-150)||(34438845-34438988)
chr3 (45-78)||(8605484-8605517)
chr3 (35-114)||(34560479-34560560)
chr3 (35-114)||(39657174-39657255)
chr3 (35-80)||(40038472-40038517)
chr3 (92-144)||(50111638-50111691)
chr3 (470-518)||(2449250-2449298)
chr3 (10-115)||(15879019-15879127)
chr3 (4-75)||(17205365-17205437)
chr3 (10-88)||(48422227-48422307)
[»] scaffold0369 (2 HSPs)
scaffold0369 (1-228)||(4222-4452)
scaffold0369 (343-518)||(3926-4102)
[»] scaffold0021 (1 HSPs)
scaffold0021 (1-155)||(167839-167993)
[»] scaffold1711 (1 HSPs)
scaffold1711 (318-518)||(1153-1352)
[»] scaffold0022 (3 HSPs)
scaffold0022 (1-228)||(4738-4968)
scaffold0022 (343-518)||(5088-5264)
scaffold0022 (10-114)||(112037-112144)
[»] scaffold1500 (2 HSPs)
scaffold1500 (1-228)||(1040-1270)
scaffold1500 (343-518)||(1390-1566)
[»] scaffold0139 (4 HSPs)
scaffold0139 (1-228)||(13585-13815)
scaffold0139 (309-518)||(20953-21164)
scaffold0139 (309-518)||(13899-14109)
scaffold0139 (1-216)||(20650-20858)
[»] scaffold0028 (3 HSPs)
scaffold0028 (10-228)||(131075-131299)
scaffold0028 (308-416)||(130880-130990)
scaffold0028 (470-518)||(89466-89514)
[»] scaffold0529 (2 HSPs)
scaffold0529 (1-228)||(3460-3692)
scaffold0529 (343-518)||(3166-3341)
[»] scaffold0175 (3 HSPs)
scaffold0175 (1-199)||(17560-17760)
scaffold0175 (1-228)||(488-720)
scaffold0175 (470-518)||(968-1016)
[»] scaffold1615 (1 HSPs)
scaffold1615 (1-228)||(11-241)
[»] scaffold0092 (2 HSPs)
scaffold0092 (1-228)||(10275-10505)
scaffold0092 (343-496)||(10624-10778)
[»] scaffold0447 (1 HSPs)
scaffold0447 (1-228)||(27-259)
[»] scaffold0383 (2 HSPs)
scaffold0383 (1-228)||(2891-3123)
scaffold0383 (318-518)||(2596-2799)
[»] scaffold0107 (3 HSPs)
scaffold0107 (1-218)||(31822-32042)
scaffold0107 (334-496)||(31535-31698)
scaffold0107 (433-495)||(39873-39935)
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-148)||(7790-7938)
scaffold0003 (385-488)||(7443-7547)
[»] scaffold0075 (2 HSPs)
scaffold0075 (1-179)||(33983-34165)
scaffold0075 (385-518)||(34374-34520)
[»] scaffold0032 (4 HSPs)
scaffold0032 (1-179)||(12878-13060)
scaffold0032 (1-228)||(107683-107915)
scaffold0032 (385-459)||(13268-13342)
scaffold0032 (35-114)||(93367-93448)
[»] scaffold0026 (4 HSPs)
scaffold0026 (318-517)||(64372-64570)
scaffold0026 (1-228)||(108239-108470)
scaffold0026 (385-518)||(107950-108084)
scaffold0026 (3-114)||(64074-64185)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-179)||(164505-164687)
[»] scaffold0173 (1 HSPs)
scaffold0173 (1-179)||(5779-5961)
[»] scaffold0761 (2 HSPs)
scaffold0761 (1-179)||(1100-1281)
scaffold0761 (343-518)||(1451-1627)
[»] scaffold0387 (2 HSPs)
scaffold0387 (35-179)||(6742-6889)
scaffold0387 (45-78)||(535-568)
[»] scaffold0303 (1 HSPs)
scaffold0303 (35-179)||(4001-4148)
[»] scaffold0225 (1 HSPs)
scaffold0225 (10-228)||(22732-22953)
[»] scaffold0125 (2 HSPs)
scaffold0125 (1-179)||(43489-43671)
scaffold0125 (473-518)||(41851-41896)
[»] scaffold0029 (1 HSPs)
scaffold0029 (5-179)||(49367-49545)
[»] scaffold0615 (1 HSPs)
scaffold0615 (35-179)||(5755-5901)
[»] scaffold0574 (1 HSPs)
scaffold0574 (35-179)||(9054-9202)
[»] scaffold0215 (4 HSPs)
scaffold0215 (385-518)||(9266-9397)
scaffold0215 (385-518)||(16164-16295)
scaffold0215 (10-114)||(8890-8994)
scaffold0215 (10-114)||(15788-15892)
[»] scaffold0892 (2 HSPs)
scaffold0892 (1-148)||(3989-4138)
scaffold0892 (423-498)||(3637-3712)
[»] scaffold0017 (3 HSPs)
scaffold0017 (1-148)||(44142-44291)
scaffold0017 (1-148)||(54445-54594)
scaffold0017 (385-496)||(54100-54212)
[»] scaffold0116 (2 HSPs)
scaffold0116 (343-518)||(239-411)
scaffold0116 (1-114)||(654-767)
[»] scaffold0049 (2 HSPs)
scaffold0049 (13-179)||(48744-48913)
scaffold0049 (470-518)||(48390-48438)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-179)||(95540-95722)
[»] scaffold0682 (1 HSPs)
scaffold0682 (4-175)||(8072-8248)
[»] scaffold0207 (1 HSPs)
scaffold0207 (4-175)||(11248-11424)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-120)||(32167-32286)
[»] scaffold0183 (2 HSPs)
scaffold0183 (318-488)||(6831-7002)
scaffold0183 (5-114)||(7212-7321)
[»] scaffold0473 (1 HSPs)
scaffold0473 (1-114)||(9598-9711)
[»] scaffold0077 (2 HSPs)
scaffold0077 (5-114)||(2609-2718)
scaffold0077 (473-518)||(36928-36973)
[»] scaffold0367 (2 HSPs)
scaffold0367 (1-228)||(16833-17046)
scaffold0367 (312-416)||(17136-17241)
[»] scaffold0118 (1 HSPs)
scaffold0118 (10-148)||(33969-34110)
[»] scaffold0066 (4 HSPs)
scaffold0066 (45-169)||(45590-45718)
scaffold0066 (45-169)||(54976-55104)
scaffold0066 (385-518)||(45234-45369)
scaffold0066 (385-518)||(54620-54755)
[»] scaffold0155 (2 HSPs)
scaffold0155 (318-486)||(23600-23769)
scaffold0155 (13-109)||(23289-23385)
[»] scaffold1714 (1 HSPs)
scaffold1714 (1-97)||(1-97)
[»] scaffold0850 (1 HSPs)
scaffold0850 (1-93)||(5093-5185)
[»] scaffold0257 (1 HSPs)
scaffold0257 (1-93)||(5988-6080)
[»] scaffold0516 (1 HSPs)
scaffold0516 (385-488)||(12045-12149)
[»] scaffold0012 (2 HSPs)
scaffold0012 (385-518)||(34076-34210)
scaffold0012 (470-518)||(247454-247502)
[»] scaffold0335 (1 HSPs)
scaffold0335 (1-119)||(5086-5206)
[»] scaffold0013 (2 HSPs)
scaffold0013 (318-409)||(154282-154373)
scaffold0013 (45-116)||(36100-36173)
[»] scaffold0103 (1 HSPs)
scaffold0103 (10-120)||(34297-34410)
[»] scaffold0518 (1 HSPs)
scaffold0518 (1-82)||(10372-10453)
[»] scaffold0095 (1 HSPs)
scaffold0095 (39-114)||(33248-33326)
[»] scaffold0010 (2 HSPs)
scaffold0010 (1-64)||(137458-137521)
scaffold0010 (35-114)||(31672-31753)
[»] scaffold0361 (2 HSPs)
scaffold0361 (464-517)||(3394-3447)
scaffold0361 (1-120)||(3805-3925)
[»] scaffold0162 (1 HSPs)
scaffold0162 (470-518)||(8192-8240)
[»] scaffold0338 (1 HSPs)
scaffold0338 (10-114)||(9635-9742)
[»] scaffold0078 (2 HSPs)
scaffold0078 (1-120)||(36606-36724)
scaffold0078 (470-518)||(37078-37126)
[»] scaffold0014 (1 HSPs)
scaffold0014 (10-114)||(85981-86088)
[»] scaffold0302 (1 HSPs)
scaffold0302 (385-518)||(12316-12449)
[»] scaffold0058 (2 HSPs)
scaffold0058 (161-227)||(57165-57231)
scaffold0058 (45-88)||(69862-69906)
[»] scaffold0610 (2 HSPs)
scaffold0610 (45-111)||(119-187)
scaffold0610 (45-108)||(9635-9700)
[»] scaffold0132 (2 HSPs)
scaffold0132 (385-518)||(13709-13855)
scaffold0132 (384-416)||(42677-42709)
[»] scaffold0327 (1 HSPs)
scaffold0327 (45-114)||(6319-6390)
[»] scaffold0138 (1 HSPs)
scaffold0138 (45-114)||(21954-22025)
[»] scaffold0016 (1 HSPs)
scaffold0016 (10-114)||(116046-116153)
[»] scaffold1600 (1 HSPs)
scaffold1600 (161-227)||(32-98)
[»] scaffold0025 (2 HSPs)
scaffold0025 (4-98)||(53973-54071)
scaffold0025 (470-518)||(9052-9100)
[»] scaffold0359 (1 HSPs)
scaffold0359 (77-144)||(1920-1989)
[»] scaffold0251 (1 HSPs)
scaffold0251 (186-227)||(13083-13124)
[»] scaffold1542 (1 HSPs)
scaffold1542 (470-518)||(546-594)
[»] scaffold0772 (1 HSPs)
scaffold0772 (470-518)||(5732-5780)
[»] scaffold0643 (1 HSPs)
scaffold0643 (35-97)||(152-216)
[»] scaffold0413 (1 HSPs)
scaffold0413 (470-518)||(6076-6124)
[»] scaffold0266 (1 HSPs)
scaffold0266 (470-518)||(3594-3642)
[»] scaffold0195 (2 HSPs)
scaffold0195 (470-518)||(19409-19457)
scaffold0195 (470-518)||(21493-21541)
[»] scaffold0150 (1 HSPs)
scaffold0150 (4-77)||(29227-29302)
[»] scaffold0106 (1 HSPs)
scaffold0106 (470-518)||(41932-41980)
[»] scaffold0452 (1 HSPs)
scaffold0452 (35-78)||(2326-2369)
[»] scaffold0035 (2 HSPs)
scaffold0035 (10-114)||(108957-109064)
scaffold0035 (10-114)||(117458-117565)
[»] scaffold0521 (1 HSPs)
scaffold0521 (35-77)||(11784-11826)
[»] scaffold0498 (1 HSPs)
scaffold0498 (470-516)||(9083-9129)
[»] scaffold1295 (1 HSPs)
scaffold1295 (35-114)||(754-835)
[»] scaffold0700 (1 HSPs)
scaffold0700 (47-114)||(3149-3218)
[»] scaffold0151 (1 HSPs)
scaffold0151 (45-78)||(21941-21974)
[»] scaffold0218 (1 HSPs)
scaffold0218 (45-120)||(4732-4808)
[»] scaffold0141 (2 HSPs)
scaffold0141 (470-518)||(22743-22791)
scaffold0141 (470-518)||(26998-27046)
[»] scaffold0124 (1 HSPs)
scaffold0124 (470-518)||(1594-1642)
[»] scaffold0122 (1 HSPs)
scaffold0122 (45-120)||(19497-19573)
[»] scaffold0117 (1 HSPs)
scaffold0117 (48-114)||(11100-11168)
[»] scaffold0031 (1 HSPs)
scaffold0031 (56-114)||(71262-71322)
[»] scaffold0018 (1 HSPs)
scaffold0018 (470-518)||(51194-51242)
[»] scaffold0011 (1 HSPs)
scaffold0011 (470-518)||(123176-123224)


Alignment Details
Target: chr2 (Bit Score: 207; Significance: 1e-113; HSPs: 76)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 308 - 518
Target Start/End: Original strand, 19886499 - 19886709
Alignment:
Q  308 gttgaagggaagctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattat 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19886499 gttgaagggaagctttaggaatcaagtgggtgacctaggagctgaattgaaactaggattaaggataatcaacttcaaaggtaagggggttagttattat 19886598  T
Q  408 cataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgta 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19886599 cataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgta 19886698  T
Q  508 tgcatgaattg 518  Q
    |||||||||||    
T  19886699 tgcatgaattg 19886709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 24826229 - 24826488
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||    
T  24826229 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtgtttaccattagtgaccgttggt 24826328  T
Q  101 tatat-tttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaa-tttgagttgagcccatt 198  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||    
T  24826329 tatatgtttaccgttgttagtaattaccgtggagtgtatagaaacttttgaattgtgttaggatgggttaggcccattagaattttgagttaagcccatt 24826428  T
Q  199 agtggagatgacactagggtcgtcttagaatagttattcatttcacaagacaattttcat 258  Q
    |  || ||| |||||||||| |||||||||| |||||||||||||||| |||||||||||    
T  24826429 aagggggataacactagggttgtcttagaatggttattcatttcacaaaacaattttcat 24826488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 28775332 - 28775550
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28775332 atggtaattttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 28775431  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaattt-gagttgagcccatta 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| || ||||||||||||    
T  28775432 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattatgttagaatgagttaggcccattagaatttggaattgagcccatta 28775531  T
Q  200 gtggagatgacactagggt 218  Q
      |||||| ||| ||||||    
T  28775532 agggagataacattagggt 28775550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 19886192 - 19886449
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  19886192 atggtaattttggtgagaattattttat-aattagtgagaacccttattttactaagttactagtggagtgattagtttttaccgttagtaaccgttggt 19886290  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattag-aatttgagttgagcccatta 199  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||| |||||||||    
T  19886291 tatattttaccgtcgttagtaattaccgtcgagtgtatagaaacttttgaattgtgttagaataggttaggcccattagcattttgagttaagcccatta 19886390  T
Q  200 gtggagatgacactagggtcgtcttagaatagttattca-tttcacaagacaattttcat 258  Q
      || ||| |||||||||| |||||||||| | |||||| |||||||| |||||||||||    
T  19886391 agggggataacactagggttgtcttagaattg-tattcattttcacaaaacaattttcat 19886449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 25213793 - 25213564
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttgg 99  Q
    |||||||| ||||||||||||||||||  |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  25213793 atggtaattttggtgagaattattttaacaattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgttgg 25213694  T
Q  100 ttatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaa-tttgagttgagcccatt 198  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||| ||||||||    
T  25213693 ttatattttaccgttgttagtaattaccgtggagtgtatagaaacttttgaattgtgttaggatggattaggcccattagaattttgagttaagcccatt 25213594  T
Q  199 agtggagatgacactagggtcgtcttagaa 228  Q
    |  || ||| ||| |||||| ||| |||||    
T  25213593 aagggggataacattagggttgtcatagaa 25213564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 11230861 - 11231081
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||| |||||| || || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  11230861 atggtaattttggtgagaatcattttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttcgt 11230960  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||| ||||||||||||||||||| || ||||||||||    
T  11230961 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttttggaattatgttagaatgagttaggcccattagaatttggaattgagcccat 11231060  T
Q  198 tagtggagatgacactagggt 218  Q
    ||  |||||| ||| ||||||    
T  11231061 taagggagataacattagggt 11231081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 24685305 - 24685524
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||| |||||| || || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  24685305 atggtaattttggtgagaatcattttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttcgt 24685404  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaatttgagttgagcccatt 198  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||  ||||| |||||||||| |||||||||||||||||| || |||||||||||    
T  24685405 tatattttaccgttgttagtaattaccgttgagtgtataggaactttttggaattatgttagaatgagttaggcccattagaattggaattgagcccatt 24685504  T
Q  199 agtggagatgacactagggt 218  Q
    |  |||||| ||| ||||||    
T  24685505 aagggagataacattagggt 24685524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 42177495 - 42177725
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| || || ||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  42177495 atggtaattttggtgagaattattttaatatttagtgagaacccttattttactaagttactagtgtagtgattatattttaccgttagtgaccgttggt 42177594  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    || |||||||||||||||||||||||||||||||||||||||||||||  || || ||||||||||||||||||||||||||||||  | ||||||||||    
T  42177595 tagattttaccgttgttagtaattaccgttgagtgtatagaaactttttagagttatgttagaatgggttaggcccattagaatttataattgagcccat 42177694  T
Q  198 tagtggagatgacactagggtcgtcttagaa 228  Q
    ||  |||||| ||| |||||| ||| |||||    
T  42177695 taagggagataacattagggttgtcatagaa 42177725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 22512708 - 22512928
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||| |||||| || ||  |||| ||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||| ||    
T  22512708 atggtaattttggtgagaatcattttaatatttaatgagaacccttattttaccaagttactagtgtaatgattagtttttatcgttagtgaccgttcgt 22512807  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||| ||||||||||||||||||| || ||||||||||    
T  22512808 tatattttaccgttgttagtaattaccgttgagtggatagaaactttttggaattatgttagaatgagttaggcccattagaatttggaattgagcccat 22512907  T
Q  198 tagtggagatgacactagggt 218  Q
    ||  |||||| ||| ||||||    
T  22512908 taagggagataacattagggt 22512928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 23777572 - 23777754
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||||| ||||||||||||||||| | ||  | ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23777572 atggtaattttggtgagaattatttttaatatattgtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgttg 23777671  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||| |||||||||    
T  23777672 gttatattttaccgttgttagtaattaccgttgagtgtttagaaactttttagaattgtgttagaatgggttaagcccattag 23777754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 21142603 - 21142456
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21142603 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactattgtagtgattagtttttaccgttagtgaccgttggt 21142504  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt 148  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||    
T  21142503 tataatttaccgttgttagtaattaccgttgagtgcatagaaactttt 21142456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 5 - 179
Target Start/End: Original strand, 7507371 - 7507548
Alignment:
Q  5 taatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttggttat 103  Q
    |||| |||||||||||||||||| |  || ||||| |||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  7507371 taattttggtgagaattattttagtgtttagtgagaacccttattttaataagttactagtgtagtgattagtttttacggtttagtgaccgttggttat 7507470  T
Q  104 attttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||| |||||||||    
T  7507471 attttaccgttgttagtaattaccgttgagtgtatagaaactttttagaattatgttagaatgggttaagcccattag 7507548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 5888167 - 5888315
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttgg 99  Q
    |||||||| ||| |||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5888167 atggtaattttgatgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgttgg 5888266  T
Q  100 ttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt 148  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5888267 ttataatttaccgttgttagtaattaccgttgagtgtatagaaactttt 5888315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 334 - 496
Target Start/End: Original strand, 11231205 - 11231368
Alignment:
Q  334 tgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 432  Q
    ||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  11231205 tgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttattatcataatcatgtacaatctttgcattt 11231304  T
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    ||||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||    
T  11231305 tctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatg 11231368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 334 - 496
Target Start/End: Original strand, 22513052 - 22513215
Alignment:
Q  334 tgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 432  Q
    ||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  22513052 tgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttattatcataatcatgtacaatctttgcattt 22513151  T
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    ||||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||    
T  22513152 tctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatg 22513215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 334 - 496
Target Start/End: Original strand, 24685648 - 24685811
Alignment:
Q  334 tgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 432  Q
    ||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  24685648 tgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttattatcataatcatgtacaatctttgcattt 24685747  T
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    ||||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||    
T  24685748 tctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatg 24685811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 334 - 496
Target Start/End: Original strand, 28775674 - 28775837
Alignment:
Q  334 tgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 432  Q
    ||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  28775674 tgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttattatcataatcatgtacaatctttgcattt 28775773  T
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    ||||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||    
T  28775774 tctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatg 28775837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 22256604 - 22256429
Alignment:
Q  4 gtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttggtta 102  Q
    ||||| |||||||||||||||||| |  || ||||| ||| ||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||    
T  22256604 gtaattttggtgagaattattttagtgtttagtgagaaccattattttactaagttactagtgtagtgattaatttttaccgtttagtgtccgttggtta 22256505  T
Q  103 tattttaccgttgttagtaa-ttaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggccca 175  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  ||||| ||||||||||||||| |||||    
T  22256504 tattttaccgttgttagtaatttaccgttgagtgtatagaaactttttagaattatgttagaatgggttaagccca 22256429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 17205083 - 17204900
Alignment:
Q  1 atggtaatcttggtgagaatta--ttttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgtt 97  Q
    |||||||| |||||||||||||  ||||| |  || ||||| ||| ||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||    
T  17205083 atggtaattttggtgagaattaatttttaatgtttagtgagaaccattattttaccaagttactagtgtagtgattagtttttactgtttagtgaccgtt 17204984  T
Q  98 ggttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    | ||||||||||| |||||||||||||||||||||||||||||||||||||  ||||| ||||| ||||||||| |||||||||    
T  17204983 gattatattttactgttgttagtaattaccgttgagtgtatagaaactttttagaattatgttacaatgggttaagcccattag 17204900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 343 - 518
Target Start/End: Complemental strand, 12728772 - 12728596
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||||| ||||||||| ||  ||  || |||||  |||| ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  12728772 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgtt 12728673  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||| ||  | |||||||||||    
T  12728672 gtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattg 12728596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 19688941 - 19689051
Alignment:
Q  4 gtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttat 103  Q
    ||||| |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19688941 gtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttac 19689040  T
Q  104 attttaccgtt 114  Q
    |||||||||||    
T  19689041 attttaccgtt 19689051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 385 - 518
Target Start/End: Original strand, 23777963 - 23778097
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgc 483  Q
    ||||||| |||||||||||| |||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23777963 aaggtaaaggggttagttatcatcataatcatgttcaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcttgctaaattcgtgc 23778062  T
Q  484 tcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||| ||| ||  |||||||||||||    
T  23778063 tcttgctgtgatgctattttcttatgcatgaattg 23778097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 343 - 518
Target Start/End: Complemental strand, 8944226 - 8944050
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||||| ||||||||| ||  ||  || |||||  |||| ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  8944226 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgtt 8944127  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||| ||| ||  | |||||||||||    
T  8944126 gtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgttgtgatgctattttcttgtgcatgaattg 8944050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 343 - 518
Target Start/End: Complemental strand, 34824855 - 34824679
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||||| ||||||||| ||  ||  || |||||  |||| ||||||||||||||||| ||||||||||||||||  |||||| |||||||||||||||    
T  34824855 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagtgattatcataatcatgtacaatttttgcattttctcatgtt 34824756  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||| ||  | |||||||||||    
T  34824755 gtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattg 34824679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 343 - 518
Target Start/End: Original strand, 42177845 - 42178021
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||| ||||||||||||| ||  || ||| |||||  |||| ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  42177845 taggggctgaattgaagcaagagtttaggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgtt 42177944  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| ||| ||| ||| ||  | |||||||||||    
T  42177945 gtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgttgtaatgctattttcttgtgcatgaattg 42178021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 380 - 518
Target Start/End: Original strand, 3798516 - 3798655
Alignment:
Q  380 cttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaatt 478  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||    
T  3798516 cttctaaggtaagggggttagttattatcataatcatgtataatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgtggctaaatt 3798615  T
Q  479 cgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||| ||| ||||||| ||  | |||||||||||    
T  3798616 cgtgctcttgttgtaatgttattttcttgtgcatgaattg 3798655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 33128799 - 33128680
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| || || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  33128799 atggtaattttggtgagaattattttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttcgt 33128700  T
Q  101 tatattttaccgttgttagt 120  Q
    || ||||||||||| |||||    
T  33128699 tacattttaccgttattagt 33128680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 35 - 175
Target Start/End: Original strand, 28030780 - 28030924
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttggttatattttaccgttgttagt-aattaccgttga 132  Q
    ||||| ||| ||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||| |    
T  28030780 gtgagaaccattattttactaagttactagtatagtaattagtttttaccgcttagtgaccgttggttatattttaccgttgttagtgatttaccgttca 28030879  T
Q  133 gtgtatagaaactttt--gaattgtgttagaatgggttaggccca 175  Q
    ||||||||||||||||  ||||| ||||||||||||||| |||||    
T  28030880 gtgtatagaaactttttagaattatgttagaatgggttaagccca 28030924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 343 - 518
Target Start/End: Complemental strand, 16935973 - 16935797
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||||||||||||||  ||  ||  || |||||  |||| ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  16935973 taggagctgaattgaagaaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgtt 16935874  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||||||||||||  || ||||||| |||||||||||||||| ||| ||  | |||||||||||    
T  16935873 gtatgaaaatgggttgatgaacaattgttgttaaattcatgctcttgctgtgatgctattttcttgtgcatgaattg 16935797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 343 - 518
Target Start/End: Complemental strand, 17006633 - 17006457
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||||||||||||||  ||  ||  || |||||  |||| ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  17006633 taggagctgaattgaagaaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgtt 17006534  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||||||||||||  || ||||||| |||||||||||||||| ||| ||  | |||||||||||    
T  17006533 gtatgaaaatgggttgatgaacaattgttgttaaattcatgctcttgctgtgatgctattttcttgtgcatgaattg 17006457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 385 - 518
Target Start/End: Original strand, 12641560 - 12641694
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgc 483  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||   |||||||||||||    
T  12641560 aaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgtggctaaattcgtgc 12641659  T
Q  484 tcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||| ||| ||||||| ||  | |||||||||||    
T  12641660 tcttgttgtaatgttattttcttgtgcatgaattg 12641694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 23774861 - 23774751
Alignment:
Q  4 gtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttat 103  Q
    ||||| |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||     
T  23774861 gtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactattgtagtgattagtttttactgttagtgaccgttggttac 23774762  T
Q  104 attttaccgtt 114  Q
    |||||||||||    
T  23774761 attttaccgtt 23774751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 22284713 - 22284537
Alignment:
Q  4 gtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttggtt 101  Q
    ||||| ||||||||||||||||| | |  || | ||| ||| |||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||    
T  22284713 gtaattttggtgagaattatttttagtgtttagcgagaaccattattttactaagttactagtgtagtaattagtttttaccgtttagggaccgttggtt 22284614  T
Q  102 atattttaccgttgttagtaa-ttaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggccca 175  Q
    |||||||| |||||||||||| || ||||||||||||| |||||||||  ||||| ||||||||||||||| |||||    
T  22284613 atattttaacgttgttagtaatttcccgttgagtgtatggaaactttttagaattatgttagaatgggttaagccca 22284537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 343 - 518
Target Start/End: Original strand, 12635744 - 12635920
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||||| ||||||||| ||  ||  || |||||  |||| ||||||||||||||||||||||||||||||||||  |||||| |||||| ||||||||    
T  12635744 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcatttcctcatgtt 12635843  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||| |||||||||||||||  ||||||||||||||||||| ||||||| ||| ||  | |||||||||||    
T  12635844 gtatgaaaataggttgatgaacaattgttgctaaattcgtgctcttgttgtgatgctattttcttgtgcatgaattg 12635920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 308 - 416
Target Start/End: Original strand, 24826538 - 24826646
Alignment:
Q  308 gttgaagggaagctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattat 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||| ||||||||| || ||    
T  24826538 gttgaagggaagctttaggaatcaagtgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaaaggggttagtcatcat 24826637  T
Q  408 cataatcat 416  Q
    |||||||||    
T  24826638 cataatcat 24826646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 45 - 169
Target Start/End: Complemental strand, 22275438 - 22275310
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttggttatattttaccgttgttagtaa-ttaccgttgagtgtatagaa 142  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||    
T  22275438 ttattttactaagttactagtgtagtaattaatttttaccgtttagtgaccgttggttatattttaccgttgttagtaatttaccgttgagtgtatgaaa 22275339  T
Q  143 actttt--gaattgtgttagaatgggtta 169  Q
    ||||||  |||||  ||||||||||||||    
T  22275338 actttttagaattaggttagaatgggtta 22275310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 16936308 - 16936192
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttg 98  Q
    |||||||| ||||||||||||||||| | |  || ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  16936308 atggtaattttggtgagaattatttttaatgtttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgttg 16936209  T
Q  99 gttatattttaccgttg 115  Q
    |||||||||||||||||    
T  16936208 gttatattttaccgttg 16936192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 17006968 - 17006852
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttg 98  Q
    |||||||| ||||||||||||||||| | |  || ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17006968 atggtaattttggtgagaattatttttaatgtttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgttg 17006869  T
Q  99 gttatattttaccgttg 115  Q
    |||||||||||||||||    
T  17006868 gttatattttaccgttg 17006852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 21918763 - 21918652
Alignment:
Q  3 ggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggtta 102  Q
    |||||| ||||||| |||||||||| ||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||    
T  21918763 ggtaattttggtgataattattttaataattagtgagaacccttattttactaagttagtagtgtagtgattagtttttaccgttagtgaccgttgatta 21918664  T
Q  103 tattttaccgtt 114  Q
     ||| |||||||    
T  21918663 cattctaccgtt 21918652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 12635406 - 12635498
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||| ||||||||||||||||||||| || ||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12635406 atggtaattttggtgagaattattttattagttagtgagaacctttattttactaagttactagtgtagtgattagattttaccgttagtgac 12635498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 17396219 - 17396303
Alignment:
Q  30 aattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttatattttaccgtt 114  Q
    |||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  17396219 aattagtgagaacccttattttactaagtcactagtgtagtgattagtttttaccgttagtgaccgttggttacattttaccgtt 17396303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 343 - 488
Target Start/End: Complemental strand, 23774516 - 23774370
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaa-ttttgcattttctcatgtt 441  Q
    |||||||| ||||||||| ||  ||  || |||||  |||| ||||||||||||||||||||||||||||||| ||  || |||| ||| || |||||||    
T  23774516 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcaagttcaaattttacatcttttcatgtt 23774417  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttg 488  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||    
T  23774416 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 23774370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 8944564 - 8944472
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||| |||||||||||||||||| || || ||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8944564 atggtaattttggtgagaattattttaatagttagtgagaacctttattttactaagttactagtgtagtgattagattttaccgttagtgac 8944472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 12641182 - 12641274
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||| |||||||||||||||||| || || ||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12641182 atggtaattttggtgagaattattttaatagttagtgagaacctttattttactaagttactagtgtagtgattagattttaccgttagtgac 12641274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 12729110 - 12729018
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||| |||||||||||||||||| || || ||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12729110 atggtaattttggtgagaattattttaatagttagtgagaacctttattttactaagttactagtgtagtgattagattttaccgttagtgac 12729018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 34825193 - 34825101
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||| |||||||||||||||||| || || ||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  34825193 atggtaattttggtgagaattattttaatagttagtgagaacctttattttactaagttactagtgtagtgattagattttaccgttagtgac 34825101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 38703962 - 38704054
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||| |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||  ||||||||||| ||||||||||||||||    
T  38703962 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactaaggtagtgattagattttaccgttagtgac 38704054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 3798141 - 3798233
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    ||||||||  ||||||||||||||||| || || ||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  3798141 atggtaattgtggtgagaattattttaatagttagtgagaacctttattttactaagttactagtgtagtgattagattttaccgttagtgac 3798233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 21273569 - 21273661
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||| |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||   |||||||||| ||||||||||||||||    
T  21273569 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactaagatagtgattagattttaccgttagtgac 21273661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 385 - 488
Target Start/End: Original strand, 5888548 - 5888652
Alignment:
Q  385 aaggtaagggggttagttattatcataatca-tgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgc 483  Q
    |||||||||||||| ||| | |||||||||| | |  |||||| ||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  5888548 aaggtaagggggtttgttttcatcataatcaatttcaaattttacatcttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgc 5888647  T
Q  484 tcttg 488  Q
    |||||    
T  5888648 tcttg 5888652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 431 - 518
Target Start/End: Complemental strand, 21142187 - 21142099
Alignment:
Q  431 tttctcatg-ttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||| ||| ||  | |||||||||||    
T  21142187 tttctcatggttgtatgaaaatgggttgatgaacaattgatgttaaattcgtgctcttgttgtgatgctattttcttgtgcatgaattg 21142099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 25420014 - 25420077
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactag 64  Q
    |||||||| |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||    
T  25420014 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactag 25420077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 16936200 - 16936142
Alignment:
Q  123 ttaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||    
T  16936200 ttaccgttgagtgtatagaaactttttagaattgtgttagaatgggttaagcccattag 16936142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 17006860 - 17006802
Alignment:
Q  123 ttaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||    
T  17006860 ttaccgttgagtgtatagaaactttttagaattgtgttagaatgggttaagcccattag 17006802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 2155312 - 2155425
Alignment:
Q  4 gtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccg-ttagtgaccgttggt 100  Q
    ||||| ||||||||||||||||| | |  || ||||| ||| |||||||||||||||||||||||||| |||||| |||||||| | ||||||||||| |    
T  2155312 gtaattttggtgagaattatttttagtgtttagtgagaaccattattttactaagttactagtgtagtaattagtattttaccgataagtgaccgttgct 2155411  T
Q  101 tatattttaccgtt 114  Q
      ||||||||||||    
T  2155412 agtattttaccgtt 2155425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 343 - 416
Target Start/End: Complemental strand, 25213446 - 25213372
Alignment:
Q  343 taggagctgaattgaagctaggattaagga-taatcaacttcaaaggtaagggggttagttattatcataatcat 416  Q
    |||||||||||||||||| ||  || |||| |||||| ||||||||||||||||||||||  |||||||||||||    
T  25213446 taggagctgaattgaagcaagagtttaggaataatcatcttcaaaggtaagggggttagtctttatcataatcat 25213372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 24086980 - 24087052
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagt-ttttaccgtt--agtgaccgttggttatattttaccgtt 114  Q
    |||||||||||||||||||| ||||| |||| | ||||||||||  ||||||||||||| |||||||||||||    
T  24086980 ttattttactaagttactagagtagtaattaatattttaccgtttaagtgaccgttggtgatattttaccgtt 24087052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 22762808 - 22762888
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtta-gtgaccgttggttatattttaccgtt 114  Q
    ||||| ||| |||||||||| ||||||||| ||||| |||| | |||||||||| ||||||||||||  ||||||||||||    
T  22762808 gtgagaaccgttattttactgagttactagagtagtaattaatatttaccgttaagtgaccgttggtagtattttaccgtt 22762888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 25265402 - 25265450
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||||||||||  || |||||||||||||||||||||||||||    
T  25265402 tgctaaattcgtgctctaactttgatgttatgtttgtatgcatgaattg 25265450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 45 - 98
Target Start/End: Original strand, 2771 - 2826
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttg 98  Q
    |||||||||||||||||||||||||| |||||| |||||||||| |||||||||||    
T  2771 ttattttactaagttactagtgtagtaattagtattttaccgttaagtgaccgttg 2826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 77
Target Start/End: Complemental strand, 29115076 - 29115034
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagt 77  Q
    ||||| ||| |||||||||||||||||||||||||||||||||    
T  29115076 gtgagaaccattattttactaagttactagtgtagtgattagt 29115034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 21918601 - 21918533
Alignment:
Q  161 aatgggttaggcccattagaatttgagttgagcccattagtggagatgacactagggtcgtcttagaat 229  Q
    ||||||||| ||||| |||||  | |||| ||||||||||||||||| |||||||||| ||| ||||||    
T  21918601 aatgggttaagcccactagaaactaagttaagcccattagtggagataacactagggttgtcatagaat 21918533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 17396354 - 17396421
Alignment:
Q  161 aatgggttaggcccattagaatttgagttgagcccattagtggagatgacactagggtcgtcttagaa 228  Q
    ||||||||| ||||| |||||  | |||| ||||||||||||||||| |||||||||| || ||||||    
T  17396354 aatgggttaagcccactagaaactaagttaagcccattagtggagataacactagggttgtgttagaa 17396421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 19689102 - 19689169
Alignment:
Q  161 aatgggttaggcccattagaatttgagttgagcccattagtggagatgacactagggtcgtcttagaa 228  Q
    ||||||||| ||||| |||||  | |||| ||||||||||||||||| |||||||||| || ||||||    
T  19689102 aatgggttaagcccactagaaactaagttaagcccattagtggagataacactagggttgtgttagaa 19689169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 23774700 - 23774633
Alignment:
Q  161 aatgggttaggcccattagaatttgagttgagcccattagtggagatgacactagggtcgtcttagaa 228  Q
    ||||||||| ||||| |||||  | |||| ||||||||||||||||| |||||||||| || ||||||    
T  23774700 aatgggttaagcccactagaaactaagttaagcccattagtggagataacactagggttgtgttagaa 23774633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 24885370 - 24885327
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagtt 78  Q
    ||||| ||| |||||||||||||||||||||||||| |||||||    
T  24885370 gtgagaaccattattttactaagttactagtgtagtaattagtt 24885327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 473 - 518
Target Start/End: Original strand, 19794719 - 19794764
Alignment:
Q  473 taaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||||||   |||||||| |||||||||||||||||||||    
T  19794719 taaattcgtgctccaactgtgatgatatgtttgtatgcatgaattg 19794764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 462989 - 462941
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||| ||| |||||||||||||||||    
T  462989 tgctaaattcgtgctccaactgtgatgatatatttgtatgcatgaattg 462941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 8891493 - 8891445
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||  |||||||||||||||||||||    
T  8891493 tgctaaattcgtgctccaactgtgataatatgtttgtatgcatgaattg 8891445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 14906452 - 14906500
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||    
T  14906452 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattg 14906500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 19668653 - 19668717
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgtt 97  Q
    ||||| ||| ||||||||||||||||||||  |||| |||||| |||||||||| ||||||||||    
T  19668653 gtgagaaccattattttactaagttactagaatagtaattagtattttaccgttaagtgaccgtt 19668717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 19689413 - 19689461
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||    
T  19689413 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattg 19689461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 23820322 - 23820274
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||    
T  23820322 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattg 23820274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 24294012 - 24294092
Alignment:
Q  10 ttggtgagaatta-ttttattaattggtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtta 88  Q
    ||||||||||||| ||||| |  || ||||| ||| ||||||| |||||||||||| ||||| |||||| |||||||||||    
T  24294012 ttggtgagaattacttttagtgtttagtgagaacctttattttgctaagttactagggtagtaattagtattttaccgtta 24294092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 120
Target Start/End: Original strand, 25875429 - 25875541
Alignment:
Q  10 ttggtgagaatta-ttttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttggttatattt 107  Q
    ||||||||||||| ||||| ||||| ||| | ||| || ||||||||||||||||| |||    | || |||||||||| |||||||||| || | ||||    
T  25875429 ttggtgagaattacttttagtaattagtgggaaccgttgttttactaagttactagagtaaaattaagattttaccgtttagtgaccgttagtgacattt 25875528  T
Q  108 taccgttgttagt 120  Q
    ||||||| |||||    
T  25875529 taccgttattagt 25875541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 36982453 - 36982501
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||| ||||||||||| |||||||||    
T  36982453 tgctaaattcgtgctccaactgtgatgatatgtttgtattcatgaattg 36982501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 205; Significance: 1e-112; HSPs: 81)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 308 - 516
Target Start/End: Original strand, 21073433 - 21073641
Alignment:
Q  308 gttgaagggaagctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattat 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21073433 gttgaagggaagctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattat 21073532  T
Q  408 cataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgta 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21073533 cataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttaatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgta 21073632  T
Q  508 tgcatgaat 516  Q
    |||||||||    
T  21073633 tgcatgaat 21073641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 308 - 518
Target Start/End: Complemental strand, 12788 - 12578
Alignment:
Q  308 gttgaagggaagctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattat 407  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12788 gttgaagggaagctttaggaatcaagtgggtgacctaggagctgaattgaagttaggattaaggataatcaacttcaaaggtaagggggttagttattat 12689  T
Q  408 cataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgta 507  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12688 cataatcatgtgtaattttgtattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgta 12589  T
Q  508 tgcatgaattg 518  Q
    |||||||||||    
T  12588 tgcatgaattg 12578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 22366010 - 22366268
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22366010 atggtaattttggtgagaattattttattaattggtgagaacccttatttttctaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 22366109  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaa-tttgagttgagcccatta 199  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||    
T  22366110 tatattttaccgttgttagtaattaccgtggagtgtatagaaacttttgaattgtgttaggatgggttaggcccattagaattttgagttaagcccatta 22366209  T
Q  200 gtggagatgacactagggtcgtcttagaatagttattcatttcacaagacaattttcat 258  Q
      || ||| |||||||||| |||||||||| |||||||||||||||| |||||||||||    
T  22366210 agggggataacactagggttgtcttagaatggttattcatttcacaaaacaattttcat 22366268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 43442928 - 43443186
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| || ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43442928 atggtaatttttgtgagaattattttattaattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 43443027  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaa-tttgagttgagcccatta 199  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||    
T  43443028 tatattttaccgttgttagtaattaccgtggagtgtatagaaacttttgaattgtgttaggatgggttaggcccattagaattttgagttaagcccatta 43443127  T
Q  200 gtggagatgacactagggtcgtcttagaatagttattcatttcacaagacaattttcat 258  Q
      || ||| |||||||||| |||||| ||| |||||||||||||||| |||||||||||    
T  43443128 agggggataacactagggttgtcttaaaatggttattcatttcacaaaacaattttcat 43443186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 25427333 - 25427075
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  25427333 atggtaattttggtgagaattattttaataattggtgaggacccttattttactaagttactagtggagtgattagtttttaccgttagtaaccgttggt 25427234  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattag-aatttgagttgagcccatta 199  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||    
T  25427233 tatattttaccgtcgttagtaattaccgtcgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagcattttgagttaagcccatta 25427134  T
Q  200 gtggagatgacactagggtcgtcttagaatagttattcatttcacaagacaattttcat 258  Q
      || ||| |||||||||| |||||||||| |||||||||||||||| |||| ||||||    
T  25427133 agggggataacactagggttgtcttagaatggttattcatttcacaaaacaactttcat 25427075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 4199515 - 4199773
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||| | |||    
T  4199515 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccatcagtgaccatcggt 4199614  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaa-tttgagttgagcccatta 199  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||| |||||||||    
T  4199615 tatattttaccgttgttagtaattaccgtggagtgtatagaaacttttgaattgtgttaggatgggttagacccattagaattttgagttaagcccatta 4199714  T
Q  200 gtggagatgacactagggtcgtcttagaatagttattcatttcacaagacaattttcat 258  Q
      || ||| |||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  4199715 agggggataacactagggttgtcttagaatagttattcatttcacaaaacaattttcat 4199773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 308 - 518
Target Start/End: Original strand, 18777830 - 18778040
Alignment:
Q  308 gttgaagggaagctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattat 407  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||  |||||| |||||||||||||||||||||||| |||||    
T  18777830 gttgaagggaagcttgaggaatcaagtgggtgacctaggagctgaattgaagcaagggttagagataattaacttcaaaggtaagggggttagtgattat 18777929  T
Q  408 cataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgta 507  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  18777930 cataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgttaaattcgtgctcttgctgtgatgttatgtttgta 18778029  T
Q  508 tgcatgaattg 518  Q
    |||||||||||    
T  18778030 tgcatgaattg 18778040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 29187816 - 29188044
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |    
T  29187816 atggtaattttggtgagaattattttattaattggtgaggacccttattttactaggttactattgtagtgattagtttttaccgttagtgaccgttgat 29187915  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaatttgagttgagcccattag 200  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||     
T  29187916 tatattttaccgtcgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattatattttgagttaagcccattaa 29188015  T
Q  201 tggagatgacactagggtcgtcttagaat 229  Q
     || ||| |||||||||| ||||||||||    
T  29188016 gggggataacactagggttgtcttagaat 29188044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 308 - 518
Target Start/End: Complemental strand, 19500312 - 19500103
Alignment:
Q  308 gttgaagggaagctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattat 407  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||| |||||    
T  19500312 gttgaagggaagcttgaggaatcaagtgggtgac-taggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagtgattat 19500214  T
Q  408 cataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgta 507  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19500213 cataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacacttcatgctaaattcgtgctcttgctgtgatgttatgtttgta 19500114  T
Q  508 tgcatgaattg 518  Q
    |||||||||||    
T  19500113 tgcatgaattg 19500103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 308 - 518
Target Start/End: Original strand, 22366318 - 22366529
Alignment:
Q  308 gttgaagggaagctttaggaatcaagtggg-tgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttatta 406  Q
    |||||||||||||||||| ||||||||||| ||||||||||| ||||||||||| ||| |||  ||||||||||||||||||||||||||||||| ||||    
T  22366318 gttgaagggaagctttagcaatcaagtggggtgacctaggagttgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagtgatta 22366417  T
Q  407 tcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgt 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22366418 tcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgagcaattcatgctaaattcgtgctcttgctgtgatgttatgtttgt 22366517  T
Q  507 atgcatgaattg 518  Q
    ||||||||||||    
T  22366518 atgcatgaattg 22366529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 308 - 518
Target Start/End: Original strand, 4199823 - 4200033
Alignment:
Q  308 gttgaagggaagctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattat 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||  |||||    
T  4199823 gttgaagggaagctttaggaatcaagtgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagggattat 4199922  T
Q  408 cataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgta 507  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  4199923 cataatcatgtgtaattttgcatattctcatgttgtatgaaaatgagttgatgaataattcatgctaaattcgtgctcttgttgtgatgttatgtttgta 4200022  T
Q  508 tgcatgaattg 518  Q
    |||||||||||    
T  4200023 tgcatgaattg 4200033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 308 - 518
Target Start/End: Complemental strand, 25427042 - 25426832
Alignment:
Q  308 gttgaagggaagctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaag-gataatcaacttcaaaggtaagggggttagttatta 406  Q
    ||||||||||||||| | ||||||||||||| || |||||||||||||||||| |||  | || ||||||||||||||||||||||||||||||| ||||    
T  25427042 gttgaagggaagcttaaagaatcaagtgggtaac-taggagctgaattgaagcaaggggttagagataatcaacttcaaaggtaagggggttagtgatta 25426944  T
Q  407 tcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgt 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25426943 tcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgt 25426844  T
Q  507 atgcatgaattg 518  Q
    ||||||||||||    
T  25426843 atgcatgaattg 25426832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 5 - 258
Target Start/End: Original strand, 21073126 - 21073383
Alignment:
Q  5 taatcttggtgagaattattttattaattggtgaggacccttattttactaagttacta---gtgtagtgattagtttttaccgttagtgaccgttggtt 101  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||| |||||||||||||| |||||||| ||||||||||    
T  21073126 taattttggtgagaattattttattaattggtgaggacccttattttactaagttactactagtggagtgattagtttttgccgttagtaaccgttggtt 21073225  T
Q  102 atattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattag-aatttgagttgagcccattag 200  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||     
T  21073226 atattttaccgtcgttagtaattaccgtcgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagcattttgagttaagcccattaa 21073325  T
Q  201 tggagatgacactagggtcgtcttagaatagttattca-tttcacaagacaattttcat 258  Q
     || ||| |||||||||| |||||||||| | |||||| |||||||| |||||||||||    
T  21073326 gggggataacactagggttgtcttagaattg-tattcattttcacaaaacaattttcat 21073383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 308 - 518
Target Start/End: Original strand, 29188123 - 29188332
Alignment:
Q  308 gttgaagggaagctttaggaatcaagtggg-tgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttatta 406  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||| ||||    
T  29188123 gttgaagggaagctttaggaatcaagtggggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagtgatta 29188222  T
Q  407 tcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgt 506  Q
    | ||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  29188223 ttataatcatgt--aattttgcattttctcatgttgtatgaaaatgggtcgatgaacaattcatgctagattcgtgctcttactgtgatgttatgtttgt 29188320  T
Q  507 atgcatgaattg 518  Q
    ||||||||||||    
T  29188321 atgcatgaattg 29188332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 18777517 - 18777748
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||||| ||| ||||||||||||| | ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18777517 atggtaattttgatgagaattatttttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgttg 18777616  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt-gaattgtgttagaatgggttaggcccattagaatttgagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  18777617 gttatattttaccgttgttagtaattaccgtcgagtgtatagaaacttttagaattgtgttagaatgagttaggcccattagaatttgagttgagcccat 18777716  T
Q  198 tagtggagatgacactagggtcgtcttagaat 229  Q
    ||  || ||| |||||||||| ||| ||||||    
T  18777717 taagggggataacactagggttgtcatagaat 18777748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 308 - 518
Target Start/End: Original strand, 43443236 - 43443443
Alignment:
Q  308 gttgaagggaagctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattat 407  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||| |||||    
T  43443236 gttgaagggaagctt-aggaatcaagtgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagtgattat 43443334  T
Q  408 cataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgta 507  Q
    |||||||||||||||  |||||| |||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  43443335 cataatcatgtgtaa--ttgcatattctcatgttatatgaaaatggattgatgaacaattcatgttaaattcgtgctcttgctgtgatgttatgtttgta 43443432  T
Q  508 tgcatgaattg 518  Q
    |||||||||||    
T  43443433 tgcatgaattg 43443443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 23543024 - 23542794
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| ||||| ||||| |||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  23543024 atggtaattttggtgagaattattttaataattagtgagaacccttgttttactaagttattagtgtagtaattagtttttaccgttagtgaccgttggt 23542925  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt-gaattgtgttagaatgggttaggcccattagaa-tttgagttgagcccatt 198  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  23542924 tatattttaccgttgttagtaattaccgttgagtgtatataaacttttagaattatgttagaatgggttaggcccattagaattttgagttgagcccatt 23542825  T
Q  199 agtggagatgacactagggtcgtcttagaat 229  Q
    |  |||||| ||| |||||| ||| ||||||    
T  23542824 aagggagataacattagggttgtcatagaat 23542794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 17471114 - 17471334
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| || || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17471114 atggtaattttggtgagaattattttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 17471213  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  || || |||||||||||||||||||||||||||||| || ||||||||||    
T  17471214 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttttagagttatgttagaatgggttaggcccattagaatttagaattgagcccat 17471313  T
Q  198 tagtggagatgacactagggt 218  Q
    ||  |||||| ||| ||||||    
T  17471314 taagggagataacattagggt 17471334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 21931925 - 21932155
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||  |    
T  21931925 atggtaattttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttatcgttagtgatcgttcat 21932024  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||| ||||||||||||||||||| || ||||||||||    
T  21932025 tatattttaccgttgttagtaattaccgttgagtggatagaaactttttggaattatgttagaatgagttaggcccattagaatttggaattgagcccat 21932124  T
Q  198 tagtggagatgacactagggtcgtcttagaa 228  Q
    ||  |||||| ||| |||||| ||| |||||    
T  21932125 taagggagataacattagggttgtcatagaa 21932155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 21938095 - 21938325
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||  |    
T  21938095 atggtaattttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttatcgttagtgatcgttcat 21938194  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||| ||||||||||||||||||| || ||||||||||    
T  21938195 tatattttaccgttgttagtaattaccgttgagtggatagaaactttttggaattatgttagaatgagttaggcccattagaatttggaattgagcccat 21938294  T
Q  198 tagtggagatgacactagggtcgtcttagaa 228  Q
    ||  |||||| ||| |||||| ||| |||||    
T  21938295 taagggagataacattagggttgtcatagaa 21938325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 21 - 199
Target Start/End: Original strand, 22882629 - 22882808
Alignment:
Q  21 tattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttatattttaccgttgttagt 120  Q
    ||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22882629 tattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttatattttaccgttgttagt 22882728  T
Q  121 aattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaattt-gagttgagcccatta 199  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| || ||||||||||||    
T  22882729 aattaccgttgagtgtatagaaacttttgaattatgttagaatgagttaggcccattagaatttggaattgagcccatta 22882808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 13095 - 12838
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||| | |||||||    
T  13095 atggtaat-ttggtaagaattattttattaattagtgagaacccttattttactaagttactagtgtagtaattagtttttatcgttagtaatcgttggt 12997  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattag-aatttgagttgagcccatta 199  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |||||||| |||||||||    
T  12996 tatattttaccgtcgttagtaattaccgtcgagtgtatagaaactttttaattgtgttagaatgggttaggcccattagcattttgagttaagcccatta 12897  T
Q  200 gtggagatgacactagggtcgtcttagaatagttattca-tttcacaagacaattttcat 258  Q
      || ||| ||||||||||  ||||| ||| | |||||| |||||||| |||||||||||    
T  12896 agggggataacactagggttatcttacaattg-tattcattttcacaaaacaattttcat 12838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 10777495 - 10777715
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| || || ||||  ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  10777495 atggtaattttggtgagaattattttaatatttagtgaaaacccttactttactaagttactagtgtagtgattagtttttaccgttagtgactgttcgt 10777594  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaa-tttgagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||| ||||||||||| | ||    
T  10777595 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttttagaattatgttagaatgggttaggcccattagaattttgagttgagtcaat 10777694  T
Q  198 tagtggagatgacactagggt 218  Q
    ||  || ||| ||||||||||    
T  10777695 taagggggataacactagggt 10777715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 16106394 - 16106162
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||||| ||||||||||||||||| | || || ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16106394 atggtaattttggtgagaattatttttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgttg 16106295  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagccc 195  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||  || || |||||||||||||||||||||||||||||| || ||||||||    
T  16106294 attatattttaccgttgttagtaattaccgttgagtgtatagaaactttttagagttatgttagaatgggttaggcccattagaatttagaattgagccc 16106195  T
Q  196 attagtggagatgacactagggtcgtcttagaa 228  Q
    ||||  |||||| ||| |||||| ||| |||||    
T  16106194 attaagggagataacattagggttgtcatagaa 16106162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 19500602 - 19500373
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19500602 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 19500503  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaatttgagttgagcccattag 200  Q
    |||||||||||                ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||     
T  19500502 tatattttacc----------------gttgagtgtatagaaacttttgaattgtgttagaatgggctaggcccattagattttgagttgagcccattaa 19500419  T
Q  201 tggagatgacactagggtcgtcttagaatagttattcatttcacaa 246  Q
     || ||| |||||||||| ||| ||||||  |||||||||||||||    
T  19500418 gggggataacactagggttgtcatagaatgattattcatttcacaa 19500373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 314 - 518
Target Start/End: Original strand, 10777816 - 10778022
Alignment:
Q  314 gggaagctttaggaatcaagtggg-tgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataa 412  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||| |||| ||||||||||    
T  10777816 gggaagcttgaggaatcaagtggggtgacctaggagctgaattgaagcaagggttaaggataatcatcttcaaaggtaaggggggtagtgattatcataa 10777915  T
Q  413 tcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgca 511  Q
    ||||||  |||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||| ||  | ||||    
T  10777916 tcatgtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgca 10778015  T
Q  512 tgaattg 518  Q
    |||||||    
T  10778016 tgaattg 10778022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 318 - 518
Target Start/End: Complemental strand, 27010244 - 27010045
Alignment:
Q  318 agctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatg 417  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||  ||  || |||||  |||| ||||||||||||||||||||||||| |||||||    
T  27010244 agctttaggaatcaagtgggtgacttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcacaatcatg 27010145  T
Q  418 tgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaatt 517  Q
    |  | |||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  27010144 ta-atttttgcatttgctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaatt 27010046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 35582769 - 35582549
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||| |||||| || ||  |||| ||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||| ||    
T  35582769 atggtaattttggtgagaatcattttaatatttaatgagaacccttattttaccaagttactagtgtaatgattagtttttatcgttagtgaccgttcgt 35582670  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||| ||||||||||||||||||| || ||||||||||    
T  35582669 tatattttaccgttgttagtaattaccgttgagtggatagaaactttttggaattatgttagaatgagttaggcccattagaatttggaattgagcccat 35582570  T
Q  198 tagtggagatgacactagggt 218  Q
    ||  |||||| ||| ||||||    
T  35582569 taagggagataacattagggt 35582549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 36989293 - 36989513
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||| |||||| || ||  |||| ||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||| ||    
T  36989293 atggtaattttggtgagaatcattttaatatttaatgagaacccttattttaccaagttactagtgtaatgattagtttttatcgttagtgaccgttcgt 36989392  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||||| ||| ||||||||||||||||||| || ||||||||||    
T  36989393 tatattttaccgttgttagtaattaccgttgagtggatagaaactttttggaattatgttaggatgagttaggcccattagaatttggaattgagcccat 36989492  T
Q  198 tagtggagatgacactagggt 218  Q
    ||  |||||| ||| ||||||    
T  36989493 taagggagataacattagggt 36989513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 318 - 500
Target Start/End: Complemental strand, 7425729 - 7425546
Alignment:
Q  318 agctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatg 417  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||  ||  || |||||  |||| |||||||||||||||||||||||||||||||||    
T  7425729 agctttaggaatcaagtgggtgacttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatg 7425630  T
Q  418 tgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttat 500  Q
    |  |||||| |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  7425629 tacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattattgctaaattcgtgctcttgctgtgatgttat 7425546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 308 - 496
Target Start/End: Original strand, 21932220 - 21932411
Alignment:
Q  308 gttgaagggaa-gctttaggaatcaagt-gggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttatt 405  Q
    ||||||||||| |||| ||||||||| | |||||||||||||||||||||||||| ||| |||  |||||||||||||||||||||||||||||||||||    
T  21932220 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 21932319  T
Q  406 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||    
T  21932320 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatg 21932411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 308 - 496
Target Start/End: Original strand, 21938390 - 21938581
Alignment:
Q  308 gttgaagggaa-gctttaggaatcaagt-gggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttatt 405  Q
    ||||||||||| |||| ||||||||| | |||||||||||||||||||||||||| ||| |||  |||||||||||||||||||||||||||||||||||    
T  21938390 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 21938489  T
Q  406 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||    
T  21938490 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatg 21938581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 334 - 496
Target Start/End: Complemental strand, 35582425 - 35582262
Alignment:
Q  334 tgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 432  Q
    ||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  35582425 tgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttattatcataatcatgtacaatctttgcattt 35582326  T
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    ||||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||    
T  35582325 tctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatg 35582262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 342 - 518
Target Start/End: Original strand, 11211940 - 11212117
Alignment:
Q  342 ctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgt 440  Q
    ||||||||||||||||||| ||  ||| || |||||| |||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||    
T  11211940 ctaggagctgaattgaagcaagagttagggttaatcatcttcaaaggtaagggggttagttattatcataatcatgttcaatttttgcattttctcatgt 11212039  T
Q  441 tgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||  | |||||||||||    
T  11212040 tgtatgaaaatgggttgatgaacaattcttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattg 11212117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 334 - 496
Target Start/End: Original strand, 22882951 - 22883114
Alignment:
Q  334 tgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 432  Q
    ||||||||||||||||||||||||||| ||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||  ||| |||||||||    
T  22882951 tgggtgacctaggagctgaattgaagcaagggttagggataatcaacttcaaagataagggggttagttattatcataatcatgtacaatctttgcattt 22883050  T
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    ||||||||||||||||||||||||| |||||||||  || |||||| |||||||||||||||||    
T  22883051 tctcatgttgtatgaaaatgggttggtgaacaattgttgttaaatttgtgctcttgctgtgatg 22883114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 9729883 - 9730030
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttgg 99  Q
    |||||||| ||||||||||||||||| | || |  ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  9729883 atggtaattttggtgagaattatttttaatattaagtgagaacccttattttactaagttactagtgtagtgattagtttttagcgttagtaaccgttgg 9729982  T
Q  100 ttatattttaccgttgttagtaattaccgttgagtgtatagaaacttt 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9729983 ttatattttaccgttgttagtaattaccgttgagtgtatagaaacttt 9730030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 5 - 179
Target Start/End: Complemental strand, 17910239 - 17910061
Alignment:
Q  5 taatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttggtta 102  Q
    |||| ||||||||||||||||| | |  || ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |    
T  17910239 taattttggtgagaattatttttaatgtttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtaaccgttggtca 17910140  T
Q  103 tattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||| |||| ||||    
T  17910139 tattttaccgttgttagtaattaccgttgagtgtatagaaactttttagaattatgttagaatgggttaagcccgttag 17910061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 34940014 - 34939833
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||||| ||||||||||||||||| | ||  | ||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34940014 atggtaattttggtgagaattatttttaatatattgtgagaacc-ttattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgttg 34939916  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    ||||||||||||| |||||||||||||||||||||||| || ||||||||  ||||||||||||||||||||| |||||||||    
T  34939915 gttatattttaccattgttagtaattaccgttgagtgtttataaactttttagaattgtgttagaatgggttaagcccattag 34939833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 334 - 496
Target Start/End: Original strand, 36989637 - 36989800
Alignment:
Q  334 tgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 432  Q
    ||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| ||    
T  36989637 tgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttattatcataatcatgtacaatctttgcaatt 36989736  T
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    ||||||||||||||||||||||||| |||||||||  || |||||||||||||| |||||||||    
T  36989737 tctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctctagctgtgatg 36989800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 5 - 179
Target Start/End: Complemental strand, 23515287 - 23515110
Alignment:
Q  5 taatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttacc-gttagtgaccgttggttat 103  Q
    |||| |||||||||||||||||| || || ||||| |||||||||||||||||||||||||||||||||| |||||||||  ||||| ||||||||||||    
T  23515287 taattttggtgagaattattttaatatttagtgagaacccttattttactaagttactagtgtagtgattggtttttaccatttagttaccgttggttat 23515188  T
Q  104 attttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
     |||||||||||||||||||||||||||||||||| |||||||||  ||||| ||||||||  ||||| |||||||||    
T  23515187 gttttaccgttgttagtaattaccgttgagtgtatcgaaactttttagaattatgttagaaatggttaagcccattag 23515110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 343 - 518
Target Start/End: Original strand, 35790974 - 35791150
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||||||||||||||| ||  ||  || |||||  |||| ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  35790974 taggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgtt 35791073  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||  | |||||||||||    
T  35791074 gtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgttattttcttgtgcatgaattg 35791150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 318 - 518
Target Start/End: Original strand, 17471438 - 17471640
Alignment:
Q  318 agctttaggaatcaagtggg-tgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcat 416  Q
    ||||| ||||||||| |||| | | ||||||||||||||||||| ||  ||   | |||||| |||||||||||||||||||||||||||||||||||||    
T  17471438 agcttgaggaatcaattggggtaagctaggagctgaattgaagcaagagtttgagttaatcatcttcaaaggtaagggggttagttattatcataatcat 17471537  T
Q  417 gtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaa 515  Q
    ||  || ||||| |||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||| ||| ||  | ||||||||    
T  17471538 gtacaaattttgtattttctcatgttgtatgaaaatgggttgatgaacaattgttgataaattcgtgctcttgctgtgatgctattttcttgtgcatgaa 17471637  T
Q  516 ttg 518  Q
    |||    
T  17471638 ttg 17471640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 343 - 518
Target Start/End: Complemental strand, 23514941 - 23514765
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||||||||||||||| ||  ||  || |||||  |||| |||||||||||||||||||| |||||||||||||  |||||| |||||||||||||||    
T  23514941 taggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttatcatcataatcatgttcaatttttgcattttctcatgtt 23514842  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||| ||  | |||||||||||    
T  23514841 gtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattg 23514765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 343 - 496
Target Start/End: Original strand, 1219396 - 1219550
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||||| ||||||||| ||  ||  || |||||  |||| ||||||||||||||||| ||||||||||||||||  |||||| |||||||||||||||    
T  1219396 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagtgattatcataatcatgtacaatttttgcattttctcatgtt 1219495  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  1219496 gtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatg 1219550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 7426054 - 7425941
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| |||||  |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  7426054 atggtaattttggtgagaattattttaataattaatgagaactcttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttgat 7425955  T
Q  101 tatattttaccgtt 114  Q
    ||||||||||||||    
T  7425954 tatattttaccgtt 7425941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 35 - 175
Target Start/End: Complemental strand, 7529617 - 7529473
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttggttatattttaccgttgttagtaa-ttaccgttga 132  Q
    ||||| ||| |||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||| |||| |||||    
T  7529617 gtgagaaccattattttactaagttactagtgtagtaattagtttttaccgtttagtgactgttggttatattttaccgttgttagtaatttactgttga 7529518  T
Q  133 gtgtatagaaactttt--gaattgtgttagaatgggttaggccca 175  Q
    ||||||||||||||||   | || ||||||||||||||| |||||    
T  7529517 gtgtatagaaactttttatagttatgttagaatgggttaagccca 7529473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 11343424 - 11343332
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||| |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11343424 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 11343332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 1219058 - 1219150
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||| |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  1219058 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagggtagtgattagattttaccgttagtgac 1219150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 24713256 - 24713164
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||| |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  24713256 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagggtagtgattagattttaccgttagtgac 24713164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 343 - 488
Target Start/End: Complemental strand, 23328937 - 23328791
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatca-tgtgtaattttgcattttctcatgtt 441  Q
    |||||||| ||||||||| ||  ||  || |||||  |||| ||||||||||||||||||||||||||||||| | |  |||||| ||| || |||||||    
T  23328937 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcaatttcaaattttacatcttttcatgtt 23328838  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttg 488  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||    
T  23328837 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 23328791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 343 - 488
Target Start/End: Complemental strand, 24616541 - 24616395
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatca-tgtgtaattttgcattttctcatgtt 441  Q
    |||||||| ||||||||| ||  ||  || |||||  |||| ||||||||||||||||||||||||||||||| | |  |||||| ||| || |||||||    
T  24616541 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcaatttcaaattttacatcttttcatgtt 24616442  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttg 488  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||    
T  24616441 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 24616395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 343 - 488
Target Start/End: Complemental strand, 24712917 - 24712771
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatca-tgtgtaattttgcattttctcatgtt 441  Q
    |||||||| ||||||||| ||  ||  || |||||  |||| ||||||||||||||||||||||||||||||| | |  |||||| ||| || |||||||    
T  24712917 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcaatttcaaattttacatcttttcatgtt 24712818  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttg 488  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||    
T  24712817 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 24712771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 343 - 488
Target Start/End: Complemental strand, 24745935 - 24745789
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatca-tgtgtaattttgcattttctcatgtt 441  Q
    |||||||| ||||||||| ||  ||  || |||||  |||| ||||||||||||||||||||||||||||||| | |  |||||| ||| || |||||||    
T  24745935 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcaatttcaaattttacatcttttcatgtt 24745836  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttg 488  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||    
T  24745835 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 24745789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 23329275 - 23329183
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||| ||||||||||||| |||| ||||| ||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  23329275 atggtaattttggtgagaattaatttaataattagtgagaacccttattttactaagttactagggtagtgattagattttaccgttagtgac 23329183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 24617015 - 24616923
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||| |||||||||||||||||| ||||| | ||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  24617015 atggtaattttggtgagaattattttaataattagcgagaacccttattttactaagttactagggtagtgattagattttaccgttagtgac 24616923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 24746274 - 24746182
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||| |||||||||||||||||| ||||| | ||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  24746274 atggtaattttggtgagaattattttaataattagcgagaacccttattttactaagttactagggtagtgattagattttaccgttagtgac 24746182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 308 - 416
Target Start/End: Complemental strand, 11343118 - 11343008
Alignment:
Q  308 gttgaagggaa-gctttaggaatcaagtggg-tgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttatt 405  Q
    ||||||||||| |||| |||||||||||||| |||||||||||||||||||||||   | ||| || |||||  ||||||||||||||||||||||| ||    
T  11343118 gttgaagggaaagcttgaggaatcaagtggggtgacctaggagctgaattgaagcagaggttagggttaatcttcttcaaaggtaagggggttagttttt 11343019  T
Q  406 atcataatcat 416  Q
    |||||||||||    
T  11343018 atcataatcat 11343008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 3674594 - 3674513
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatattttaccgtt 114  Q
    ||||| |||||||||||||||| ||||||| ||||| |||||| |||||||||| |||||||||||||  ||||||||||||    
T  3674594 gtgagaacccttattttactaaattactagggtagtaattagtattttaccgttaagtgaccgttggtagtattttaccgtt 3674513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 21222120 - 21222233
Alignment:
Q  4 gtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggt 100  Q
    ||||| ||||||||||||||||| | |  || ||||| ||| ||||||||||||||||||||||| || |||||| |||||||||| ||||||||||| |    
T  21222120 gtaattttggtgagaattatttttagtgtttagtgagaaccattattttactaagttactagtgtggtaattagtattttaccgttaagtgaccgttgtt 21222219  T
Q  101 tatattttaccgtt 114  Q
      ||||||||||||    
T  21222220 agtattttaccgtt 21222233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 34939528 - 34939480
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||    
T  34939528 tgctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattg 34939480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 161 - 227
Target Start/End: Original strand, 108500 - 108566
Alignment:
Q  161 aatgggttaggcccattagaatttgagttgagcccattagtggagatgacactagggtcgtcttaga 227  Q
    ||||||||| ||||| |||||  | |||||||||||||||||||||| |||||||||| ||||||||    
T  108500 aatgggttaagcccactagaaactaagttgagcccattagtggagataacactagggttgtcttaga 108566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 308 - 416
Target Start/End: Complemental strand, 16106077 - 16105967
Alignment:
Q  308 gttgaagggaa-gctttaggaatcaagtggg-tgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttatt 405  Q
    ||||||||||| |||| ||||||||| |||| | | ||||||||||||||||||| ||  || ||| |||||  |||| |||||||||||||||||  ||    
T  16106077 gttgaagggaaagcttgaggaatcaattggggtaagctaggagctgaattgaagcaagagtttaggttaatcttcttctaaggtaagggggttagtcttt 16105978  T
Q  406 atcataatcat 416  Q
    |||||||||||    
T  16105977 atcataatcat 16105967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 7729142 - 7729070
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagt-ttttaccgtt--agtgaccgttggttatattttaccgtt 114  Q
    |||||||||||||||||| | ||||| |||||| ||||||||||  ||||||| ||||| |||||||||||||    
T  7729142 ttattttactaagttactggagtagtaattagtattttaccgtttaagtgaccattggtgatattttaccgtt 7729070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 32965256 - 32965337
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatattttaccgtt 114  Q
    ||||| ||| |||||||||||||||||||| ||||| |||| | |||||| ||| |||||||||||||  ||||||||||||    
T  32965256 gtgagaaccattattttactaagttactagggtagtaattaatattttactgttaagtgaccgttggtagtattttaccgtt 32965337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 11343270 - 11343202
Alignment:
Q  161 aatgggttaggcccattagaatttgagttgagcccattagtggagatgacactagggtcgtcttagaat 229  Q
    ||||||||| ||||| |||||  | |||| ||||||||||||||||| |||||||||| ||| ||||||    
T  11343270 aatgggttaagcccactagaaactaagttaagcccattagtggagataacactagggttgtcatagaat 11343202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 18531079 - 18531127
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||| |||||||||||||||||||||    
T  18531079 tgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattg 18531127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 24224863 - 24224971
Alignment:
Q  10 ttggtgagaattatttt-attaattggtgaggacccttatttt-actaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatat 105  Q
    ||||||||||||||||| | |  |||||||| ||| ||||||| ||| |||||||||||| || |||||| |||||||||| ||||||||||| |  |||    
T  24224863 ttggtgagaattatttttagtgtttggtgagaaccattatttttactcagttactagtgtggttattagtattttaccgttaagtgaccgttgttagtat 24224962  T
Q  106 tttaccgtt 114  Q
    |||||||||    
T  24224963 tttaccgtt 24224971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 1219212 - 1219279
Alignment:
Q  161 aatgggttaggcccattagaatttgagttgagcccattagtggagatgacactagggtcgtcttagaa 228  Q
    ||||||||| ||||| |||||  | |||| ||||||||||||||||| |||||||||| || ||||||    
T  1219212 aatgggttaagcccactagaaactaagttaagcccattagtggagataacactagggttgtgttagaa 1219279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 23329121 - 23329054
Alignment:
Q  161 aatgggttaggcccattagaatttgagttgagcccattagtggagatgacactagggtcgtcttagaa 228  Q
    ||||||||| ||||| |||||  | |||| ||||||||||||||||| |||||||||| || ||||||    
T  23329121 aatgggttaagcccactagaaactaagttaagcccattagtggagataacactagggttgtgttagaa 23329054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 23467154 - 23467083
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagt-ttttaccgtta-gtgaccgttggttatattttaccgtt 114  Q
    ||||||| |||||||||||| ||| | |||||| ||||||||||| |||||||||| | |||||||||||||    
T  23467154 ttattttgctaagttactagggtaataattagtattttaccgttatgtgaccgttgttgatattttaccgtt 23467083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 35790791 - 35790858
Alignment:
Q  161 aatgggttaggcccattagaatttgagttgagcccattagtggagatgacactagggtcgtcttagaa 228  Q
    ||||| ||| ||||| |||||  | |||| ||||||||||||||||| |||||||||| |||||||||    
T  35790791 aatggattaagcccactagaaactaagttaagcccattagtggagataacactagggttgtcttagaa 35790858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 28902923 - 28902845
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatattttacc 111  Q
    ||||| ||| |||||||||||||||||||| ||||| |||| |  ||||||||| |||||||||||||  |||||||||    
T  28902923 gtgagaaccgttattttactaagttactagagtagtaattaatagtttaccgttaagtgaccgttggtagtattttacc 28902845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 28939318 - 28939240
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatattttacc 111  Q
    ||||| ||| |||||||||||||||||||| ||||| |||| |  ||||||||| |||||||||||||  |||||||||    
T  28939318 gtgagaaccgttattttactaagttactagagtagtaattaatagtttaccgttaagtgaccgttggtagtattttacc 28939240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 128
Target Start/End: Original strand, 21646282 - 21646367
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttggttatattttaccgttgttagt-aattaccg 128  Q
    |||||||||||||||||||| |||    | || |||||||||| |||||||||| || ||||||||||||| ||||| ||||||||    
T  21646282 ttattttactaagttactagagtaaaattaagattttaccgtttagtgaccgttagtgatattttaccgtttttagtgaattaccg 21646367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 78
Target Start/End: Complemental strand, 37984066 - 37984033
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagtt 78  Q
    |||||||||||||||||||||||||| |||||||    
T  37984066 ttattttactaagttactagtgtagtaattagtt 37984033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 20623220 - 20623172
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||    
T  20623220 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattg 20623172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 21233540 - 21233588
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||    
T  21233540 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattg 21233588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 22053845 - 22053893
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||| |||||||||||| ||||||||    
T  22053845 tgctaaattcgtgctccaactgtgatgatatgtttgtatgtatgaattg 22053893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 23507216 - 23507168
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||    ||||||| |||||||||||||||||||||    
T  23507216 tgctaaattcgtgctccatttgtgatgatatgtttgtatgcatgaattg 23507168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 25900418 - 25900466
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||    
T  25900418 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattg 25900466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 37052995 - 37052947
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||    
T  37052995 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattg 37052947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 190; Significance: 1e-103; HSPs: 82)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 16814530 - 16814775
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16814530 atggtaattttggtgagaattattttattaattggtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 16814629  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaatttgagttgagcccattag 200  Q
    |||||||||| |||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||     
T  16814630 tatattttactgttgttagtaattatcgtggagtgtatagaaacttttgagttgtgttagaatgggttaggcccattagattttgagttgagcccattaa 16814729  T
Q  201 tggagatgacactagggtcgtcttagaatagttattcatttcacaa 246  Q
     || ||| |||||||||| ||| |||||| ||||||||||||||||    
T  16814730 gggggataacactagggttgtcatagaatggttattcatttcacaa 16814775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 16375919 - 16376147
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16375919 atggtaattttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 16376018  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattag-aatttgagttgagcccatta 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||    
T  16376019 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagcattttgagttaagcccatta 16376118  T
Q  200 gtggagatgacactagggtcgtcttagaa 228  Q
      |||||| ||| |||||| ||| |||||    
T  16376119 agggagataacattagggttgtcatagaa 16376147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 16383243 - 16383471
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16383243 atggtaattttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 16383342  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattag-aatttgagttgagcccatta 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||    
T  16383343 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagcattttgagttaagcccatta 16383442  T
Q  200 gtggagatgacactagggtcgtcttagaa 228  Q
      |||||| ||| |||||| ||| |||||    
T  16383443 agggagataacattagggttgtcatagaa 16383471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 27653513 - 27653771
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  27653513 atggtaattttggtgagaattattttattaattggtgaggacccttattttactaagttactagtggagtgattagtttttaccgttagtaaccgttggt 27653612  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattag-aatttgagttgagcccatta 199  Q
    ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||    
T  27653613 tatattttatcgtcgttagtaattaccgtcgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagcattttgagttaagcccatta 27653712  T
Q  200 gtggagatgacactagggtcgtcttagaatagttattca-tttcacaagacaattttcat 258  Q
      || ||| |||||||||| |||||||||| | |||||| |||||||| |||||||||||    
T  27653713 agggggataacactagggttgtcttagaattg-tattcattttcacaaaacaattttcat 27653771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 308 - 518
Target Start/End: Original strand, 27653821 - 27654031
Alignment:
Q  308 gttgaagggaagctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattat 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||| ||||||||||| |||||    
T  27653821 gttgaagggaagctttaggaatcaagtgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtgagggggttagtgattat 27653920  T
Q  408 cataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgta 507  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  27653921 cataatcatgtgtaattttgcattttctcatgttgtatgaaaatggattgatgaacaaatcatgctaaattcgtgctcttgctgtgatgttatgcttgta 27654020  T
Q  508 tgcatgaattg 518  Q
    |||||||||||    
T  27654021 tgcatgaattg 27654031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 14625657 - 14625886
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14625657 atggtaattttggtgagaattattttattaattggtgagaacctttattttactaagttactagtgtagtgattagtttttaccgttagtaaccgttggt 14625756  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaac-ttttgaattgtgttagaatgggttaggcccattagaatttgagttgagcccatta 199  Q
    ||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14625757 tatattttaccgttgttagtaattaccgtcgattgtatagaaactttttgaattgtgttagaatgggttaggcccattagaatttgagttgaacccatta 14625856  T
Q  200 gtggagatgacactagggtcgtcttagaat 229  Q
      || ||| |||||||||| ||| ||||||    
T  14625857 agggggataacactagggttgtcatagaat 14625886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 25951546 - 25951774
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| || || ||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  25951546 atggtaattttggtgagaattattttaatagttagtgagaacccttgttttactaagttactagtgtagtgattagtttttatcgttagtgaccgttgat 25951645  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaatttgagttgagcccattag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||     
T  25951646 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattatattttgagttaagcccattaa 25951745  T
Q  201 tggagatgacactagggtcgtcttagaat 229  Q
     || ||| |||||||||| ||||||||||    
T  25951746 gggggataacactagggttgtcttagaat 25951774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 10489432 - 10489212
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||||||||||||| || || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  10489432 atggtaattttggtgagaattattttattatttagttagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttcgt 10489333  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||| ||||||||||||||||||| || ||||||||||    
T  10489332 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttttagaattatgttagaatgagttaggcccattagaatttggaattgagcccat 10489233  T
Q  198 tagtggagatgacactagggt 218  Q
    ||  |||||| ||| ||||||    
T  10489232 taagggagataacattagggt 10489212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 16555658 - 16555877
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||| |||||| || || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  16555658 atggtaattttggtgagaatcattttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttcgt 16555757  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaatttgagttgagcccatt 198  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||  ||||| |||||||||| |||||||||||||||||| || |||||||||||    
T  16555758 tatattttaccgttgttagtaattaccgttgagtgtataggaactttttggaattatgttagaatgagttaggcccattagaattggaattgagcccatt 16555857  T
Q  199 agtggagatgacactagggt 218  Q
    |  |||||| ||| ||||||    
T  16555858 aagggagataacattagggt 16555877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 16632214 - 16632433
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||| |||||| || || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  16632214 atggtaattttggtgagaatcattttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttcgt 16632313  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaatttgagttgagcccatt 198  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||  ||||| |||||||||| |||||||||||||||||| || |||||||||||    
T  16632314 tatattttaccgttgttagtaattaccgttgagtgtataggaactttttggaattatgttagaatgagttaggcccattagaattggaattgagcccatt 16632413  T
Q  199 agtggagatgacactagggt 218  Q
    |  |||||| ||| ||||||    
T  16632414 aagggagataacattagggt 16632433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 32 - 218
Target Start/End: Complemental strand, 19299937 - 19299750
Alignment:
Q  32 ttggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttatattttaccgttgttagtaattaccgttg 131  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |    
T  19299937 ttggtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttcattatattttaccgttgttagtaattaccgtgg 19299838  T
Q  132 agtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaattt-gagttgagcccattagtggagatgacactagggt 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||  |||||| ||| ||||||    
T  19299837 agtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaatttggaattgagcccattaagggagataacattagggt 19299750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 318 - 518
Target Start/End: Complemental strand, 25175968 - 25175767
Alignment:
Q  318 agctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaag-gataatcaacttcaaaggtaagggggttagttattatcataatcat 416  Q
    |||||| ||||||||||||||||| |||||||||||||||||| |||  | || ||||||||||||||||||||||||||||||| |||| |||||||||    
T  25175968 agctttcggaatcaagtgggtgac-taggagctgaattgaagcaaggggttagagataatcaacttcaaaggtaagggggttagtgattaccataatcat 25175870  T
Q  417 gtgtaattttgcatttt-ctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaa 515  Q
    || |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25175869 gtataattttgcatttttctcatgttgtatgaaaatggattgatgaacaattcatgctaaattcgtgctcttgctgtgttgttatgtttgtatgcatgaa 25175770  T
Q  516 ttg 518  Q
    |||    
T  25175769 ttg 25175767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 22225262 - 22225492
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||  ||||| || || ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  22225262 atggtaattttggtgagaatcgttttaatatttagtgagaatccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttcgt 22225361  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||  ||||| |||||||||| ||||||||||||||||||| || ||||||||||    
T  22225362 tatattttaccgatgttagtaattaccgttgagtgtatagaaactttttagaattatgttagaatgagttaggcccattagaatttggaattgagcccat 22225461  T
Q  198 tagtggagatgacactagggtcgtcttagaa 228  Q
    ||  |||||| ||| |||||| ||| |||||    
T  22225462 taagggagataacattagggttgtcatagaa 22225492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 22251090 - 22251320
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||  ||||| || || ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  22251090 atggtaattttggtgagaatcgttttaatatttagtgagaatccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttcgt 22251189  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||  ||||| |||||||||| ||||||||||||||||||| |  ||||||||||    
T  22251190 tatattttaccgctgttagtaattaccgttgagtgtatagaaactttttagaattatgttagaatgagttaggcccattagaatttggtattgagcccat 22251289  T
Q  198 tagtggagatgacactagggtcgtcttagaa 228  Q
    ||  |||||| ||| |||||| ||| |||||    
T  22251290 taagggagataacattagggttgtcatagaa 22251320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 2 - 228
Target Start/End: Complemental strand, 15863211 - 15862981
Alignment:
Q  2 tggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    ||||||| || |||||||||||||| | || || ||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||    
T  15863211 tggtaatttttgtgagaattatttttaatatttagtgagaacccttattttactaagttatcagtgtagtgattagtttttaccgttagtgaccgttagt 15863112  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||  || || |||||||||||||||||||||||||||||| |  ||||||||||    
T  15863111 tatattttatcgttgttagtaattaccgttgagtgtatagaaactttttagagttatgttagaatgggttaggcccattagaatttagcattgagcccat 15863012  T
Q  198 tagtggagatgacactagggtcgtcttagaa 228  Q
    || ||||||| ||| |||||| ||| |||||    
T  15863011 taatggagataacattagggttgtcatagaa 15862981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 1657270 - 1657501
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagttttta-ccgttagtgaccgttgg 99  Q
    |||||||| |||||||||||||||||| || || ||||| ||||||||||||||||||||||||| |||||||||||||||| || ||||| | ||||||    
T  1657270 atggtaattttggtgagaattattttaatatttagtgagaacccttattttactaagttactagtatagtgattagtttttaccctttagtaatcgttgg 1657369  T
Q  100 ttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaatttgag-ttgagccca 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||  | | || |||||||||    
T  1657370 ttatattttaccgttgttagtaattaccgttgagtgtatagaaactttttagaattgtgttagaatgggttaagcccattagggtctaagattgagccca 1657469  T
Q  197 ttagtggagatgacactagggtcgtcttagaa 228  Q
    |||  |||||| ||| |||||| ||| |||||    
T  1657470 ttaagggagataacattagggttgtcatagaa 1657501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 4991806 - 4991576
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| | |||||||||||||||  || |  ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  4991806 atggtaatttgggtgagaattattttcatattaagtgagaacccttattttactaagttactagtgttgtgattagtttttaccgttagtgacagttggt 4991707  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag-aatttgagttgagcccat 197  Q
    ||| ||||||||||||||||||||||||| | ||||||||||||||||  ||||| ||||||||||||||||||||||||| | |||||||| |||||||    
T  4991706 tatgttttaccgttgttagtaattaccgtggggtgtatagaaactttttagaattatgttagaatgggttaggcccattagcattttgagttaagcccat 4991607  T
Q  198 tagtggagatgacactagggtcgtcttagaa 228  Q
    ||  |||||| ||| |||||| ||| |||||    
T  4991606 taagggagataacattagggttgtcatagaa 4991576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 308 - 496
Target Start/End: Original strand, 16376212 - 16376403
Alignment:
Q  308 gttgaagggaa-gctttaggaatcaagt-gggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttatt 405  Q
    ||||||||||| |||| ||||||||| | |||||||||||||||||||||||||| ||| |||  |||||||||||||||||||||||||||||||||||    
T  16376212 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 16376311  T
Q  406 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||    
T  16376312 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatg 16376403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 308 - 496
Target Start/End: Original strand, 16383536 - 16383727
Alignment:
Q  308 gttgaagggaa-gctttaggaatcaagt-gggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttatt 405  Q
    ||||||||||| |||| ||||||||| | |||||||||||||||||||||||||| ||| |||  |||||||||||||||||||||||||||||||||||    
T  16383536 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 16383635  T
Q  406 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||    
T  16383636 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatg 16383727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 396 - 518
Target Start/End: Original strand, 16825678 - 16825800
Alignment:
Q  396 gttagttattatcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgat 495  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16825678 gttagtgattatcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgat 16825777  T
Q  496 gttatgtttgtatgcatgaattg 518  Q
    |||||||||||||||||||||||    
T  16825778 gttatgtttgtatgcatgaattg 16825800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 318 - 518
Target Start/End: Complemental strand, 16232297 - 16232096
Alignment:
Q  318 agctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatg 417  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||  ||  || |||||  |||| |||||||||||||||||||||||||||||||||    
T  16232297 agctttaggaatcaagtgggtgacttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatg 16232198  T
Q  418 tgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaat 516  Q
    |  |||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||| ||  | |||||||||    
T  16232197 tacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaat 16232098  T
Q  517 tg 518  Q
    ||    
T  16232097 tg 16232096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 334 - 496
Target Start/End: Complemental strand, 10489088 - 10488925
Alignment:
Q  334 tgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 432  Q
    ||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  10489088 tgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttattatcataatcatgtacaatctttgcattt 10488989  T
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    ||||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||    
T  10488988 tctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatg 10488925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 18822894 - 18823072
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||||| ||||||||||||||||| | || || ||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||     
T  18822894 atggtaattttggtgagaattatttttaatatttagtgagaacccttattttactaagttactagtctagtgattagtttttaccgtttagtgaccgttt 18822993  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggccca 175  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||    
T  18822994 gttatgttttaccgttgttagtaattaccgttgagtgtatagaaactttttagaattgtgttagaatgggttaagccca 18823072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 18838757 - 18838935
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||||| |||||||||||| |||| | || || ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18838757 atggtaattttggtgagaattttttttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgttg 18838856  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggccca 175  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||| |||||    
T  18838857 gttatgttttaccgttgttagtaattaccgttgagtgtataaaaactttttagaattgtgttagaatgggttaagccca 18838935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 317 - 518
Target Start/End: Original strand, 22251415 - 22251618
Alignment:
Q  317 aagctttaggaatcaagt-gggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatca 415  Q
    |||||| ||||||||| | |||||||||||||||||||||||||| ||| ||| | ||||||| ||||||||||| ||||||||||||||||||||||||    
T  22251415 aagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtatgggggttagttattatcataatca 22251514  T
Q  416 tgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatga 514  Q
    |||  ||| ||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||| ||| ||  | |||||||    
T  22251515 tgtacaatctttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgttaaattcgtgctcttgctgtgatgctattttcttgtgcatga 22251614  T
Q  515 attg 518  Q
    ||||    
T  22251615 attg 22251618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 1556735 - 1556555
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttgg 99  Q
    |||||||  |||||| ||||||||||| || || ||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  1556735 atggtaactttggtgcgaattattttaatatttagtgagaacccttattttactaagttactagtttagtgattagtttttaccgtttagtgaccgttgg 1556636  T
Q  100 ttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccatta 178  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||  ||||| ||||||||||||||| ||||||||    
T  1556635 ttatgttttaccgttgttagtaattaccgttgagtatatagaaactttttagaattatgttagaatgggttaagcccatta 1556555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 334 - 496
Target Start/End: Original strand, 16556006 - 16556169
Alignment:
Q  334 tgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 432  Q
    ||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  16556006 tgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttattatcataatcatgtacaatctttgcattt 16556105  T
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    ||||||||||||||||||||||||| |||||||||  || ||||||||||||| ||||||||||    
T  16556106 tctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcctgctgtgatg 16556169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 334 - 496
Target Start/End: Original strand, 16632562 - 16632725
Alignment:
Q  334 tgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 432  Q
    ||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  16632562 tgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttattatcataatcatgtacaatctttgcattt 16632661  T
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    ||||||||||||||||||||||||| |||||||||  || ||||||||||||| ||||||||||    
T  16632662 tctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcctgctgtgatg 16632725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 317 - 518
Target Start/End: Original strand, 22225587 - 22225790
Alignment:
Q  317 aagctttaggaatcaagt-gggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatca 415  Q
    |||||| ||||||||| | |||||||||||||||||||||||||| ||| ||| | ||||||| ||||||||||| ||||||||||||||||||||||||    
T  22225587 aagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtatgggggttagttattatcataatca 22225686  T
Q  416 tgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatga 514  Q
    |||  ||| ||||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||| |||||||| ||| ||  | |||||||    
T  22225687 tgtacaatctttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgttaaattcgtgctctttctgtgatgctattttcttgtgcatga 22225786  T
Q  515 attg 518  Q
    ||||    
T  22225787 attg 22225790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 9276662 - 9276515
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttgg 99  Q
    |||||||| ||||||||||||||||| | || |  ||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  9276662 atggtaattttggtgagaattatttttaatattaagtgagaacccttattttactaagttactagtgtagtgattagtttttagtgttagtgaccgttgg 9276563  T
Q  100 ttatattttaccgttgttagtaattaccgttgagtgtatagaaacttt 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9276562 ttatattttaccgttgttagtaattaccgttgagtgtatagaaacttt 9276515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 334 - 492
Target Start/End: Complemental strand, 19299626 - 19299467
Alignment:
Q  334 tgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 432  Q
    |||| |||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  19299626 tgggcgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttattatcataatcatgtacaatctttgcattt 19299527  T
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgt 492  Q
    |||||||||||||||||||||||||||| ||||||  || ||||||||||||||||||||    
T  19299526 tctcatgttgtatgaaaatgggttgatggacaattgttgttaaattcgtgctcttgctgt 19299467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 35 - 179
Target Start/End: Original strand, 15741769 - 15741916
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttggttatattttaccgttgttagtaattaccgttgag 133  Q
    ||||| ||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  15741769 gtgagaacccttattttactatgttactagtatagtgattagtttttaccgtttagtgaccgttggttatattttaccgttgttagtaattaccgttgaa 15741868  T
Q  134 tgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    |||||||||||||||  |||||| |||||||||||||| |||||||||    
T  15741869 tgtatagaaactttttagaattgcgttagaatgggttaagcccattag 15741916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 385 - 518
Target Start/End: Original strand, 1650022 - 1650153
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgct 484  Q
    |||||||||||||||||  |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1650022 aaggtaagggggttagtctttatcataatcatgt--aattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctagattcgtgct 1650119  T
Q  485 cttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||| ||||||||||| ||||||||||||||||||    
T  1650120 cttactgtgatgttacgtttgtatgcatgaattg 1650153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 308 - 518
Target Start/End: Original strand, 14625968 - 14626178
Alignment:
Q  308 gttgaagggaagctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattat 407  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||  |||||||||||||||||||||||||||||||||||||    
T  14625968 gttgaagggaagcttgaggaatcaagtgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttattat 14626067  T
Q  408 cataatcatgtgtaattttgcattttctc--atgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttg 505  Q
    || |||||| | | | ||| ||  |||||  ||||||| || || || | | ||| | ||||  ||||||||||||||||||||||||||||||||||||    
T  14626068 cacaatcatct-tcactttacaaattctcaaatgttgtttg-aattgtgattatggataattattgctaaattcgtgctcttgctgtgatgttatgtttg 14626165  T
Q  506 tatgcatgaattg 518  Q
    |||||||||||||    
T  14626166 tatgcatgaattg 14626178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 318 - 518
Target Start/End: Original strand, 18086674 - 18086875
Alignment:
Q  318 agctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatg 417  Q
    |||||||| ||||||||||||||| |||||||||||||||||| ||  ||  || |||||  |||| ||||||||||||||||||||||  |||||||||    
T  18086674 agctttagaaatcaagtgggtgacttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattagtataatcatg 18086773  T
Q  418 tgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaat 516  Q
    |  |||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||| ||| ||  | |||||||||    
T  18086774 tacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgttgtgatgctattttcttgtgcatgaat 18086873  T
Q  517 tg 518  Q
    ||    
T  18086874 tg 18086875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 16232620 - 16232507
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16232620 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 16232521  T
Q  101 tatattttaccgtt 114  Q
    || |||||||||||    
T  16232520 tacattttaccgtt 16232507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 19610745 - 19610632
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19610745 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 19610646  T
Q  101 tatattttaccgtt 114  Q
    || |||||||||||    
T  19610645 tacattttaccgtt 19610632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 318 - 488
Target Start/End: Original strand, 29869627 - 29869798
Alignment:
Q  318 agctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatca-t 416  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||  ||  || | |||  |||| ||||||||||||||||||||||||||||||| |    
T  29869627 agctttaggaatcaagtgggtgacttaggagctgaattgaagcaagagtttgggttgatcttcttctaaggtaagggggttagttattatcataatcaat 29869726  T
Q  417 gtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttg 488  Q
     |  |||||| ||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  29869727 ttaaaattttacatcttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 29869798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 35 - 148
Target Start/End: Original strand, 12415391 - 12415505
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttggttatattttaccgttgttagtaattaccgttgag 133  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  12415391 gtgagaacccttattttactaagttactaatgtagtgattagtttttaccgtttagtgaccgttggttataatttaccgttgttagtaattaccgttgag 12415490  T
Q  134 tgtatagaaactttt 148  Q
    |||||| ||||||||    
T  12415491 tgtataaaaactttt 12415505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 343 - 496
Target Start/End: Complemental strand, 19610398 - 19610244
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||||||||||||||| ||  ||  || |||||  |||| ||||||||||||||||||||||||||||||||||  |||||| ||||||||| |||||    
T  19610398 taggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctgatgtt 19610299  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  19610298 gtatgaaaatgggttgatgaacaattattgctaaattcgtgctcttgctgtgatg 19610244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 343 - 518
Target Start/End: Complemental strand, 1556385 - 1556209
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||||||||||||||| ||  ||   | |||||  |||| |||||||||||||||||||| |||||||||||||  |||||| |||||||||||||||    
T  1556385 taggagctgaattgaagcaagagtttgtgttaatcttcttctaaggtaagggggttagttatcatcataatcatgttcaatttttgcattttctcatgtt 1556286  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||| ||  | |||||||||||    
T  1556285 gtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattg 1556209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 343 - 518
Target Start/End: Complemental strand, 23978149 - 23977973
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||||| ||||||||| ||  ||  || |||||  |||| |||||||||| |||||||||||||||||||||||  |||||| |||||||||||||||    
T  23978149 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggcgttagttattatcataatcatgtacaatttttgcattttctcatgtt 23978050  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||||||||||||   |||||||||||||||||| ||| ||||||| ||  | |||||||||||    
T  23978049 gtatgaaaatgggttgatgaacaattgtggctaaattcgtgctcttgttgtaatgttattttcttgtgcatgaattg 23977973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 16299513 - 16299629
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttg 98  Q
    |||||||| ||||||||||||||||| | |  || ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  16299513 atggtaattttggtgagaattatttttaatggttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgttg 16299612  T
Q  99 gttatattttaccgttg 115  Q
    |||||||||||||||||    
T  16299613 gttatattttaccgttg 16299629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 19630041 - 19629925
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttg 98  Q
    |||||||| ||||||||||||||||| | ||  | ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  19630041 atggtaattttggtgagaattatttttaatatattgtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagttaccgttg 19629942  T
Q  99 gttatattttaccgttg 115  Q
    |||||||||||||||||    
T  19629941 gttatattttaccgttg 19629925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 25898642 - 25898734
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||| |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  25898642 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagggtagtgattagattttaccgttagtgac 25898734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 385 - 518
Target Start/End: Original strand, 13620712 - 13620846
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgc 483  Q
    |||||||||||||||||  |  ||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  13620712 aaggtaagggggttagtcttcttcataatcatgtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgc 13620811  T
Q  484 tcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||| ||| ||| ||| ||  | |||||||||||    
T  13620812 tcttgttgtaatgctattttcttgtgcatgaattg 13620846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 9477994 - 9478086
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||| ||||| |||||||||||| ||||| ||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  9477994 atggtaattttggtaagaattattttaataattagtgagaacccttattttactaagttactagggtagtgattagattttaccgttagtgac 9478086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 16240749 - 16240633
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttg 98  Q
    |||||||| |||||||||||| |||| | || || ||||| |||||||||||||||||||||||||  |||||||||||||||||| |||||||| ||||    
T  16240749 atggtaattttggtgagaattgtttttaatatttagtgagaacccttattttactaagttactagtacagtgattagtttttaccgtttagtgacagttg 16240650  T
Q  99 gttatattttaccgttg 115  Q
    |||||||||||||||||    
T  16240649 gttatattttaccgttg 16240633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 23978487 - 23978395
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||| |||||||||||||||||| || || ||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23978487 atggtaattttggtgagaattattttaatagttagtgagaacctttattttactaagttactagtgtagtgattagattttaccgttagtgac 23978395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 309 - 401
Target Start/End: Original strand, 16814837 - 16814930
Alignment:
Q  309 ttgaagggaagctttaggaatcaagtggg-tgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagt 401  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||| ||| |||  |||||||||||||||||||||| ||||||||    
T  16814837 ttgaagggaagctttagcaatcaagtggggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagagggttagt 16814930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 23995659 - 23995567
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||| |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||  ||||||||||| |||||||||| |||||    
T  23995659 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactaaggtagtgattagattttaccgttggtgac 23995567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 29869313 - 29869395
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttac 83  Q
    |||||||| ||||||||||||||| || ||||| |||||  ||||||||||||||||||||||||||||||||||||||||||    
T  29869313 atggtaattttggtgagaattattctaataattagtgagagcccttattttactaagttactagtgtagtgattagtttttac 29869395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 26090443 - 26090357
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtta 88  Q
    |||||||| |||||||||||||||||| || || ||||| ||||||||||||||||||||  ||||||||||||||||||||||||||    
T  26090443 atggtaat-ttggtgagaattattttaatagttagtgagaacccttattttactaagttatcagtgtagtgattagtttttaccgtta 26090357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 10 - 120
Target Start/End: Original strand, 18002020 - 18002133
Alignment:
Q  10 ttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgatt-agtttttaccg-ttagtgaccgttggttatatt 106  Q
    ||||||||||||||||| | || || ||||| |||||||||||||||||||||||||  ||||||| || |||||||| ||||||||||||||||| |||    
T  18002020 ttggtgagaattatttttaatatttagtgagaacccttattttactaagttactagtacagtgattgagattttaccgtttagtgaccgttggttacatt 18002119  T
Q  107 ttaccgttgttagt 120  Q
    |||||||| |||||    
T  18002120 ttaccgttattagt 18002133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 123 - 179
Target Start/End: Complemental strand, 19629933 - 19629875
Alignment:
Q  123 ttaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||    
T  19629933 ttaccgttgagtgtatagaaactttttagaattgtgttagaatgggttaagcccattag 19629875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 389 - 518
Target Start/End: Complemental strand, 29666208 - 29666077
Alignment:
Q  389 taagggggttagttattatcataatcatgtgtaatt-ttgcattttctcat-gttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctct 486  Q
    |||| ||||||||  | |||||||||||||  |||| ||||| |||||||| |||||||||||||||| ||||| | ||||  || ||||||||||||||    
T  29666208 taagtgggttagtcttcatcataatcatgttcaattattgcaatttctcattgttgtatgaaaatggggtgatggataattgttgttaaattcgtgctct 29666109  T
Q  487 tgctgtgatgttatgtttgtatgcatgaattg 518  Q
     ||||||||||||| ||  |||| ||||||||    
T  29666108 agctgtgatgttattttcttatgtatgaattg 29666077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 123 - 179
Target Start/End: Original strand, 16299621 - 16299679
Alignment:
Q  123 ttaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||||||| |||||||||    
T  16299621 ttaccgttgagtgtatagaaactttttagaattatgttagaatgggttaagcccattag 16299679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 343 - 416
Target Start/End: Complemental strand, 4991470 - 4991396
Alignment:
Q  343 taggagctgaattgaagctaggattaagga-taatcaacttcaaaggtaagggggttagttattatcataatcat 416  Q
    |||||||||||||||||| ||  || |||| |||||| ||||||||||||||||||||||  |||||||||||||    
T  4991470 taggagctgaattgaagcaagagtttaggaataatcatcttcaaaggtaagggggttagtctttatcataatcat 4991396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 472 - 518
Target Start/End: Complemental strand, 15862720 - 15862674
Alignment:
Q  472 ctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||    
T  15862720 ctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattg 15862674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 1657760 - 1657808
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  1657760 tgctaaattcgtgctctaactgtgatgttatgtttggatgcatgaattg 1657808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 115
Target Start/End: Complemental strand, 14153007 - 14152935
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatattttaccgttg 115  Q
    |||||||||||||||||||||||||| |||||| |||||||||| ||||||||||  |  |||||||||||||    
T  14153007 ttattttactaagttactagtgtagtaattagtattttaccgttaagtgaccgttattagtattttaccgttg 14152935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 22361249 - 22361361
Alignment:
Q  4 gtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggtt 101  Q
    ||||| |||||||||||||||||| |  || ||||| ||| |||||| ||| ||||||||| ||||| |||| | |||||||||| ||||||||||| |     
T  22361249 gtaattttggtgagaattattttagtgtttagtgagaaccattatttgactcagttactagggtagtaattaatattttaccgttaagtgaccgttgtta 22361348  T
Q  102 atattttaccgtt 114  Q
     ||||||||||||    
T  22361349 gtattttaccgtt 22361361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 35009451 - 35009499
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||||||||||  ||||||||||| ||||||||||||||||||    
T  35009451 tgctaaattcgtgctctaactgtgatgttaagtttgtatgcatgaattg 35009499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 471 - 518
Target Start/End: Complemental strand, 27751675 - 27751628
Alignment:
Q  471 gctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||||||||||||||||||||||||    
T  27751675 gctaaattcgtgctctaattgtgatgttatgtttgtatgcatgaattg 27751628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 18381328 - 18381409
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccg-ttagtgaccgttggttatattttaccgtt 114  Q
    ||||| ||| |||||||||||||||||||||||||| |||||| |||||||| | ||||| ||||| |  ||||||||||||    
T  18381328 gtgagaaccattattttactaagttactagtgtagtaattagtattttaccgataagtgatcgttgctagtattttaccgtt 18381409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 16232456 - 16232389
Alignment:
Q  161 aatgggttaggcccattagaatttgagttgagcccattagtggagatgacactagggtcgtcttagaa 228  Q
    ||||||||| ||||| |||||  | |||| ||||||||||||||||| |||||||||| || ||||||    
T  16232456 aatgggttaagcccactagaaactaagttaagcccattagtggagataacactagggttgtgttagaa 16232389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 98
Target Start/End: Original strand, 16887309 - 16887400
Alignment:
Q  10 ttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttg 98  Q
    ||||||||||||||||| | |  || ||||| ||| ||||||||||||||| |||| ||||| |||||| |||||||||| |||||||||||    
T  16887309 ttggtgagaattatttttagtgtttagtgagaaccattattttactaagttgctagagtagtaattagtattttaccgttaagtgaccgttg 16887400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 19610581 - 19610514
Alignment:
Q  161 aatgggttaggcccattagaatttgagttgagcccattagtggagatgacactagggtcgtcttagaa 228  Q
    ||||||||| ||||| |||||  | |||| ||||||||||||||||| |||||||||| || ||||||    
T  19610581 aatgggttaagcccactagaaactaagttaagcccattagtggagataacactagggttgtgttagaa 19610514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 21931914 - 21931871
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagtt 78  Q
    ||||| ||| |||||||||||||||||||||||||| |||||||    
T  21931914 gtgagaaccattattttactaagttactagtgtagtaattagtt 21931871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 25898797 - 25898864
Alignment:
Q  161 aatgggttaggcccattagaatttgagttgagcccattagtggagatgacactagggtcgtcttagaa 228  Q
    ||||||||| ||||| |||||  | |||| ||||||||||||||||| |||||||||| || ||||||    
T  25898797 aatgggttaagcccactagaaactaagttaagcccattagtggagataacactagggttgtgttagaa 25898864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 34967576 - 34967533
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagtt 78  Q
    ||||| ||| ||||||||||||||||||||||||||| ||||||    
T  34967576 gtgagaaccattattttactaagttactagtgtagtggttagtt 34967533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 472 - 518
Target Start/End: Complemental strand, 23153696 - 23153650
Alignment:
Q  472 ctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||   |||||||| |||||||||||||||||||||    
T  23153696 ctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattg 23153650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 9478148 - 9478205
Alignment:
Q  161 aatgggttaggcccattagaatttgagttgagcccattagtggagatgacactagggt 218  Q
    ||||||||| ||||| |||||  | |||| ||||||||||||||||| ||||||||||    
T  9478148 aatgggttaagcccactagaaactaagttaagcccattagtggagataacactagggt 9478205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 112
Target Start/End: Complemental strand, 21623893 - 21623824
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatattttaccg 112  Q
    ||||||||||| |||||||| ||||| |||||| |||||||||| ||||||||||| |  ||||||||||    
T  21623893 ttattttactacgttactagggtagtaattagtattttaccgttaagtgaccgttgttagtattttaccg 21623824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 78
Target Start/End: Original strand, 22582324 - 22582357
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagtt 78  Q
    |||||||||||||||||||||||||| |||||||    
T  22582324 ttattttactaagttactagtgtagtaattagtt 22582357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 78
Target Start/End: Original strand, 22585114 - 22585147
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagtt 78  Q
    |||||||||||||||||||||||||| |||||||    
T  22585114 ttattttactaagttactagtgtagtaattagtt 22585147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 78
Target Start/End: Original strand, 22589945 - 22589978
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagtt 78  Q
    |||||||||||||||||||||||||| |||||||    
T  22589945 ttattttactaagttactagtgtagtaattagtt 22589978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 29869467 - 29869524
Alignment:
Q  161 aatgggttaggcccattagaatttgagttgagcccattagtggagatgacactagggt 218  Q
    ||||||||| ||||| |||||  | |||| ||||||||||||||||| ||||||||||    
T  29869467 aatgggttaagcccactagaaactaagttaagcccattagtggagataacactagggt 29869524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 88
Target Start/End: Complemental strand, 14128860 - 14128816
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagt-ttttaccgtta 88  Q
    |||||||||||||||||||||||||| ||| || |||||||||||    
T  14128860 ttattttactaagttactagtgtagtaattggtattttaccgtta 14128816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 228
Target Start/End: Complemental strand, 16240613 - 16240533
Alignment:
Q  149 gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccattagtggagatgacactagggtcgtcttagaa 228  Q
    ||||| ||||||||||||||| |||||||||  ||| || ||||||||||||  |||||| ||| |||||| ||| |||||    
T  16240613 gaattatgttagaatgggttaagcccattagggtttagaattgagcccattaagggagataacattagggttgtcatagaa 16240533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 150
Target Start/End: Complemental strand, 18433345 - 18433241
Alignment:
Q  48 ttttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttggttatattttaccgttgttagt-aattaccgttgagtgtatagaaact 145  Q
    ||||||||||||||||| |||    | || |||||||||| |||||||||| || ||||||||||||| ||||| |||||||| | || || |||||||     
T  18433345 ttttactaagttactagagtaaaattaagattttaccgtttagtgaccgtttgtgatattttaccgttattagtgaattaccggttagagtgtagaaaca 18433246  T
Q  146 tttga 150  Q
    |||||    
T  18433245 tttga 18433241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 18629137 - 18629205
Alignment:
Q  48 ttttactaagttactagtgtagtgattagtt-tttaccgtt-agtgaccgttggttatattttaccgtt 114  Q
    ||||||||||||||||||||||| ||||||| | ||||||| | ||||||||| |  ||||||||||||    
T  18629137 ttttactaagttactagtgtagtaattagttgtgtaccgttaaatgaccgttgttagtattttaccgtt 18629205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0782 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: scaffold0782
Description:

Target: scaffold0782; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 280 - 21
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  280 atggtaattttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccattagtaaccgttggt 181  T
Q  101 tatat-tttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaa-tttgagttgagcccatt 198  Q
    ||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||    
T  180 tatatgtttacctttgttagtaattaccgtggagtgtatagaaacttttgaattgtgttaggatgggttaggcccattagaattttgagttaagcccatt 81  T
Q  199 agtggagatgacactagggtcgtcttagaatagttattcatttcacaagacaattttcat 258  Q
    |  || ||| |||||||||| |||||||||| |||||||||||||||| |||||||||||    
T  80 aagggggataacactagggttgtcttagaatggttattcatttcacaaaacaattttcat 21  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 7823438 - 7823210
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7823438 atggtaattttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 7823339  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattag-aatttgagttgagcccatta 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||    
T  7823338 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagcattttgagttaagcccatta 7823239  T
Q  200 gtggagatgacactagggtcgtcttagaa 228  Q
      |||||| ||| |||||| ||| |||||    
T  7823238 agggagataacattagggttgtcatagaa 7823210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 7830749 - 7830521
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7830749 atggtaattttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 7830650  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattag-aatttgagttgagcccatta 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||    
T  7830649 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagcattttgagttaagcccatta 7830550  T
Q  200 gtggagatgacactagggtcgtcttagaa 228  Q
      |||||| ||| |||||| ||| |||||    
T  7830549 agggagataacattagggttgtcatagaa 7830521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 27177143 - 27176915
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27177143 atggtaattttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 27177044  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattag-aatttgagttgagcccatta 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||    
T  27177043 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagcattttgagttaagcccatta 27176944  T
Q  200 gtggagatgacactagggtcgtcttagaa 228  Q
      |||||| ||| |||||| ||| |||||    
T  27176943 agggagataacattagggttgtcatagaa 27176915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 183; E-Value: 9e-99
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 13910554 - 13910812
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||    
T  13910554 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtaatgattagtttttaccgttagtgaccgtcggt 13910653  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaa-tttgagttgagcccatta 199  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||    
T  13910654 tatattttaccgttgttagtaactaccgtggagtgtatagaaacttttgaattgtgttaggatgggttaggcccattagaattttgagttaagcccatta 13910753  T
Q  200 gtggagatgacactagggtcgtcttagaatagttattcatttcacaagacaattttcat 258  Q
      || ||| |||||||||| |||||||||| |||||||||||||||| |||||||||||    
T  13910754 agggggataacactagggttgtcttagaatggttattcatttcacaaaacaattttcat 13910812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 12900023 - 12899825
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12900023 atggtaattttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 12899924  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattag-aatttgagttgagcccatt 198  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||    
T  12899923 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagcattttgagttaagcccatt 12899825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 308 - 518
Target Start/End: Original strand, 13910862 - 13911072
Alignment:
Q  308 gttgaagggaagctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattat 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||| | |||||    
T  13910862 gttgaagggaagctttaggaatcaagtgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttattgattat 13910961  T
Q  408 cataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgta 507  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13910962 cataatcatgtgtaattttgcatattctcatgttgtatgaaaatgagttgatgaacaattcatgctaaattcgtgctcttgttgtgatgttatgtttgta 13911061  T
Q  508 tgcatgaattg 518  Q
    |||||||||||    
T  13911062 tgcatgaattg 13911072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 4 - 240
Target Start/End: Complemental strand, 10990130 - 10989895
Alignment:
Q  4 gtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttat 103  Q
    ||||| ||| ||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10990130 gtaattttgttgagaattattttattaattaatgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttat 10990031  T
Q  104 attttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaatttgagttgagcccattagtgg 203  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||    
T  10990030 attt-accgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagattttgagttgagcccattaaggg 10989932  T
Q  204 agatgacactagggtcgtcttagaatagttattcatt 240  Q
     ||| || ||||||| ||| |||||| ||||||||||    
T  10989931 ggataacgctagggttgtcatagaattgttattcatt 10989895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 16478494 - 16478751
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||| |||||| || || ||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  16478494 atggtaattttggtgagaatgattttaata-ttagtgcgaacccttattttactgagttactagtgtagtgattagtttttaccgttagtgaccgttggt 16478592  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaatttgagttgagcccattag 200  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||     
T  16478593 tatattttaccgttgttagtaattaccgttgagtgaatagaaacttttgaattgtgttagaatgggttaggcccattagattttgaattaagcccattaa 16478692  T
Q  201 tggagatgacactagggtcgtcttagaatagttattca-tttcacaagacaattttcat 258  Q
     || ||| |||||||||| ||||||||||  ||||||| |||||||| |||||||||||    
T  16478693 gggggataacactagggttgtcttagaatgattattcattttcacaaaacaattttcat 16478751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 27101160 - 27101380
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27101160 atggtaattttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 27101259  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||| ||||||||||||||||||| || ||||||||||    
T  27101260 tatattttaccgttgttagtaattaccgttgagtggatagaaactttttggaattatgttagaatgagttaggcccattagaatttggaattgagcccat 27101359  T
Q  198 tagtggagatgacactagggt 218  Q
    ||  |||||| ||| ||||||    
T  27101360 taagggagataacattagggt 27101380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 26009669 - 26009868
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  26009669 atggtaattttggtgagaattattttattaattggttagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtaaccgttggt 26009768  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaac-ttttgaattgtgttagaatgggttaggcccattagaatttgagttgagcccatta 199  Q
    ||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||| |||||||||    
T  26009769 tatattttaccgttgttagtaattaccgtcgagtgtatagaaactttttgaattatgttagaatgggttaggcccattagattttgagttaagcccatta 26009868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 314 - 518
Target Start/End: Original strand, 16478808 - 16479010
Alignment:
Q  314 gggaagctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataat 413  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  16478808 gggaagcttgaggaatcaagtgggtgacctaggagctgaagtgaagctagggttaaggataatcaacttcaaaggtaagggggttagtgattatcataat 16478907  T
Q  414 catgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatg 513  Q
    ||  | |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||| |||||||||||||||||||||    
T  16478908 ca--tttaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgttagattcgtgctcttactgcgatgttatgtttgtatgcatg 16479005  T
Q  514 aattg 518  Q
    |||||    
T  16479006 aattg 16479010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 15950318 - 15950548
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| || || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  15950318 atggtaattttggtgagaattattttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttcgt 15950417  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||| || ||||||||||    
T  15950418 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttttagaattatgttagaatgggttaggcccattagaatttggaattgagcccat 15950517  T
Q  198 tagtggagatgacactagggtcgtcttagaa 228  Q
    ||  |||||| ||| |||||| ||| |||||    
T  15950518 taagggagataacattagggttgtcatagaa 15950548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 311 - 518
Target Start/End: Complemental strand, 10989821 - 10989613
Alignment:
Q  311 gaagggaagctttaggaatcaagtg-ggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatca 409  Q
    |||||| ||||| |||||||||||| |||||| |||||||| ||||||||| ||| ||| ||||||||||||||||||||| |||||||||| |||||||    
T  10989821 gaaggggagcttgaggaatcaagtgaggtgacataggagcttaattgaagcaagggttagggataatcaacttcaaaggtatgggggttagtgattatca 10989722  T
Q  410 taatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatg 509  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10989721 taatcatgtataattttgcatattctcatgttgtatgaaaatgggttgatgaacaaatcatgctaaattcgtgctcttgctgtgatgttatgtttgtatg 10989622  T
Q  510 catgaattg 518  Q
    |||||||||    
T  10989621 catgaattg 10989613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 308 - 518
Target Start/End: Complemental strand, 2437873 - 2437661
Alignment:
Q  308 gttgaagggaa-gctttaggaatcaagtggg-tgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttatt 405  Q
    ||||||||||| |||| ||||||||| |||| ||||||||||||||||||||||| ||| ||| | ||||||| ||||||||||||||||||||||||||    
T  2437873 gttgaagggaaagcttgaggaatcaattggggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 2437774  T
Q  406 atcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttg 505  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  2437773 atcataatcatgtacaattttgcattttctcatgttgtatgaaaatgggataatgaacaattcttgctaaattcgtgctcttgttgtgatgttatgtttg 2437674  T
Q  506 tatgcatgaattg 518  Q
    |||||||||||||    
T  2437673 tatgcatgaattg 2437661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 14250425 - 14250655
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| || || ||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||| || ||    
T  14250425 atggtaattttggtgagaattattttaatatttagtgagaacccttattttactaagttactagtgtagtgattatattttaccgttagtgaccattcgt 14250524  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  || ||  ||||||||||||||||||||||||||||| || ||||||||||    
T  14250525 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttttagagttaagttagaatgggttaggcccattagaatttagaattgagcccat 14250624  T
Q  198 tagtggagatgacactagggtcgtcttagaa 228  Q
    ||  |||||| ||| |||||| ||| |||||    
T  14250625 taagggagataacattagggttgtcatagaa 14250655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 2438190 - 2437960
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| || || ||||| ||||||||||||||||||||  |||||||| |||||||||||||||||| ||||||||||    
T  2438190 atggtaattttggtgagaattattttaatatttagtgagaacccttattttactaagttatcagtgtagtaattagtttttaccgttagcgaccgttggt 2438091  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaa-tttgagttgagcccat 197  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||  ||||| |||||||||| |||||||||||| ||| ||||||||||||||||    
T  2438090 tatattttaccattgttagtaattaccgttgagcgtatagaaactttttagaattatgttagaatgagttaggcccattggaattttgagttgagcccat 2437991  T
Q  198 tagtggagatgacactagggtcgtcttagaa 228  Q
    ||  |||||| ||| |||||| ||| |||||    
T  2437990 taagggagataacattagggttgtcatagaa 2437960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 318 - 518
Target Start/End: Complemental strand, 13573079 - 13572880
Alignment:
Q  318 agctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatg 417  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||  ||  || |||||  |||| ||||||||||||||||||||||||| |||||||    
T  13573079 agctttaggaatcaagtgggtgacttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcacaatcatg 13572980  T
Q  418 tgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaatt 517  Q
    |  | |||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  13572979 ta-atttttgcatttgctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaatt 13572881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 15516384 - 15516603
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||| |||||||||||||| ||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||          |||||    
T  15516384 atggtaattttgatgagaattattttaataattagggagaacccttattttactaagttactagtgtagtgattagtttttaccg----------ttggt 15516473  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt-gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccatt 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  15516474 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttagaattatgttagaatgggttaggcccattagaatttagagttgagcccatt 15516573  T
Q  199 agtggagatgacactagggtcgtcttagaa 228  Q
    |  |||||| ||| |||||| ||| |||||    
T  15516574 aagggagataacattagggttgtcatagaa 15516603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 27108508 - 27108728
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||| |||||| || ||  |||| ||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||| ||    
T  27108508 atggtaattttggtgagaatcattttaatatttaatgagaacccttattttaccaagttactagtgtaatgattagtttttatcgttagtgaccgttcgt 27108607  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||| ||||||||||||||||||| || ||||||||||    
T  27108608 tatattttaccgttgttagtaattaccgttgagtggatagaaactttttggaattatgttagaatgagttaggcccattagaatttggaattgagcccat 27108707  T
Q  198 tagtggagatgacactagggt 218  Q
    ||  |||||| ||| ||||||    
T  27108708 taagggagataacattagggt 27108728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 38783252 - 38783472
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||| |||||| || ||  |||| ||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||| ||    
T  38783252 atggtaattttggtgagaatcattttaatatttaatgagaacccttattttaccaagttactagtgtaatgattagtttttatcgttagtgaccgttcgt 38783351  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||| ||||||||||||||||||| || ||||||||||    
T  38783352 tatattttaccgttgttagtaattaccgttgagtggatagaaactttttggaattatgttagaatgagttaggcccattagaatttggaattgagcccat 38783451  T
Q  198 tagtggagatgacactagggt 218  Q
    ||  |||||| ||| ||||||    
T  38783452 taagggagataacattagggt 38783472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 16419226 - 16419078
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttgg 99  Q
    |||||||| |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  16419226 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgttgg 16419127  T
Q  100 ttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt 148  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16419126 ttataatttaccgttgttagtaattaccgttgagtgtatagaaactttt 16419078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 308 - 496
Target Start/End: Complemental strand, 7823145 - 7822954
Alignment:
Q  308 gttgaagggaa-gctttaggaatcaagt-gggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttatt 405  Q
    ||||||||||| |||| ||||||||| | |||||||||||||||||||||||||| ||| |||  |||||||||||||||||||||||||||||||||||    
T  7823145 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 7823046  T
Q  406 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||    
T  7823045 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatg 7822954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 308 - 496
Target Start/End: Complemental strand, 7830456 - 7830265
Alignment:
Q  308 gttgaagggaa-gctttaggaatcaagt-gggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttatt 405  Q
    ||||||||||| |||| ||||||||| | |||||||||||||||||||||||||| ||| |||  |||||||||||||||||||||||||||||||||||    
T  7830456 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 7830357  T
Q  406 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||    
T  7830356 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatg 7830265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 308 - 496
Target Start/End: Complemental strand, 27176850 - 27176659
Alignment:
Q  308 gttgaagggaa-gctttaggaatcaagt-gggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttatt 405  Q
    ||||||||||| |||| ||||||||| | |||||||||||||||||||||||||| ||| |||  |||||||||||||||||||||||||||||||||||    
T  27176850 gttgaagggaaagcttgaggaatcaatttgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatt 27176751  T
Q  406 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||    
T  27176750 atcataatcatgtacaatctttgcattttctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatg 27176659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 318 - 518
Target Start/End: Original strand, 18979872 - 18980073
Alignment:
Q  318 agctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatg 417  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||  ||  || |||||  |||| |||||||||||||||||||||||||||||||||    
T  18979872 agctttaggaatcaagtgggtgacttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatg 18979971  T
Q  418 tgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaat 516  Q
    |  |||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||| ||  | |||||||||    
T  18979972 tacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaat 18980071  T
Q  517 tg 518  Q
    ||    
T  18980072 tg 18980073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 334 - 496
Target Start/End: Original strand, 27101504 - 27101667
Alignment:
Q  334 tgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 432  Q
    ||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  27101504 tgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttattatcataatcatgtacaatctttgcattt 27101603  T
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    ||||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||    
T  27101604 tctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatg 27101667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 334 - 496
Target Start/End: Original strand, 27108852 - 27109015
Alignment:
Q  334 tgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 432  Q
    ||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  27108852 tgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttattatcataatcatgtacaatctttgcattt 27108951  T
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    ||||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||    
T  27108952 tctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatg 27109015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 334 - 496
Target Start/End: Original strand, 38783596 - 38783759
Alignment:
Q  334 tgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 432  Q
    ||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  38783596 tgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttattatcataatcatgtacaatctttgcattt 38783695  T
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    ||||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||    
T  38783696 tctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatg 38783759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 15759640 - 15759820
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttgg 99  Q
    |||||||  |||||| ||||||||||| || || ||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  15759640 atggtaactttggtgcgaattattttaatatttagtgagaacccttattttactaagttactagtttagtgattagtttttaccgtttagtgaccgttgg 15759739  T
Q  100 ttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccatta 178  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||  ||||| ||||||||||||||| ||||||||    
T  15759740 ttatgttttaccgttgttagtaattaccgttgagtatatagaaactttttagaattatgttagaatgggttaagcccatta 15759820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 47480551 - 47480733
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||||| ||||||||||||||||| | |  || ||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||     
T  47480551 atggtaattttggtgagaattatttttaatgtttagtgagaaccattattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgttt 47480650  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||  ||||| ||||||||||||||| |||||||||    
T  47480651 gttatattttaccgttgttagtaattaccgttgaatgtatagaaactttttagaattatgttagaatgggttaagcccattag 47480733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 18253371 - 18253554
Alignment:
Q  1 atggtaatcttggtgagaattatttt--attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgtt 97  Q
    |||||||  |||||||||||||||||  | |  || ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18253371 atggtaactttggtgagaattatttttaaatgtttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgtt 18253470  T
Q  98 ggttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    ||| ||||||||||||||||||||||||||||| |||||||||||||||||  ||||| ||||||||||||||| |||||||||    
T  18253471 ggtcatattttaccgttgttagtaattaccgttaagtgtatagaaactttttagaattatgttagaatgggttaagcccattag 18253554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 48622203 - 48622351
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttgg 99  Q
    |||||||| |||||||||||||||||| |  || ||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  48622203 atggtaattttggtgagaattattttaatgtttagtgagaacccttattttattaagttactagtgtagtgattagtttttaccgtttagtgaccgttgg 48622302  T
Q  100 ttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt 148  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  48622303 ttataatttaccgttgttagtaattaccgttgagtgtatagaaactttt 48622351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 371840 - 371693
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttgg 99  Q
    |||||||| ||||||||||||||||| | || |  ||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  371840 atggtaattttggtgagaattatttttaatattaagtgagaacccttattttactaagtcactagtgtagtgattagtttttagcgttagtgaccgttgg 371741  T
Q  100 ttatattttaccgttgttagtaattaccgttgagtgtatagaaacttt 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  371740 ttatattttaccgttgttagtaattaccgttgagtgtatagaaacttt 371693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 318 - 518
Target Start/End: Complemental strand, 15927973 - 15927772
Alignment:
Q  318 agctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatg 417  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||  ||  || |||||  |||| |||||||||||||||||||||||||||||||||    
T  15927973 agctttaggaatcaagtgggtgacttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatg 15927874  T
Q  418 tgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaat 516  Q
    |  |||||| ||||||||||||||||||||||||||| ||||||| |||||  ||||||||||||||||||| ||||||| ||| ||  | |||||||||    
T  15927873 tacaatttttgcattttctcatgttgtatgaaaatggattgatgatcaattgttgctaaattcgtgctcttgttgtgatgctattttcttgtgcatgaat 15927774  T
Q  517 tg 518  Q
    ||    
T  15927773 tg 15927772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 318 - 518
Target Start/End: Original strand, 15950641 - 15950843
Alignment:
Q  318 agctttaggaatcaagtggg-tgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcat 416  Q
    ||||| ||||||||| |||| | | ||||||||||||||||||| ||  ||  || |||||  |||||||||||||||||||||||||||||||||||||    
T  15950641 agcttgaggaatcaattggggtaagctaggagctgaattgaagcaagagtttgggttaatcttcttcaaaggtaagggggttagttattatcataatcat 15950740  T
Q  417 gtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaa 515  Q
    ||  |||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||| ||  | ||||||||    
T  15950741 gtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaa 15950840  T
Q  516 ttg 518  Q
    |||    
T  15950841 ttg 15950843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 15928298 - 15928185
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15928298 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 15928199  T
Q  101 tatattttaccgtt 114  Q
    || |||||||||||    
T  15928198 tacattttaccgtt 15928185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 343 - 518
Target Start/End: Original strand, 15759990 - 15760166
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||||||||||||||| ||  ||   | |||||  |||| |||||||||||||||||||| |||||||||||||  |||||| |||||||||||||||    
T  15759990 taggagctgaattgaagcaagagtttgtgttaatcttcttctaaggtaagggggttagttatcatcataatcatgttcaatttttgcattttctcatgtt 15760089  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||| ||  | |||||||||||    
T  15760090 gtatgaaaatgggttgatgaacaattattgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattg 15760166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 343 - 518
Target Start/End: Complemental strand, 13758750 - 13758574
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||||| ||||||||| ||  ||  || |||||  |||| ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  13758750 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgtt 13758651  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||||||||||||   |||||||||||||||||| ||| ||||||| ||  | |||||||||||    
T  13758650 gtatgaaaatgggttgatgaacaattgtggctaaattcgtgctcttgttgtaatgttattttcttgtgcatgaattg 13758574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 41 - 228
Target Start/End: Complemental strand, 15862603 - 15862413
Alignment:
Q  41 acccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttggttatattttaccgttgttagtaattaccgttgagtgtata 139  Q
    ||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||| ||||||||| | |||| |||||||||||||||||||||    
T  15862603 acccttattttactaagttatcagtgtagtgattagtttttaccgtttagtgaccgttggtcatattttactg-tgttggtaattaccgttgagtgtata 15862505  T
Q  140 gaaactttt--gaattgtgttagaatgggttaggcccattagaatttgag-ttgagcccattagtggagatgacactagggtcgtcttagaa 228  Q
     ||||||||  ||||||||||||||||||||| |||||| ||  | | || ||||||||||||  |||||| ||| |||||| ||| |||||    
T  15862504 taaactttttagaattgtgttagaatgggttaagcccatcagggtctaagattgagcccattaagggagataacattagggttgtcatagaa 15862413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 385 - 518
Target Start/End: Original strand, 18253761 - 18253895
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgc 483  Q
    |||||||||||||||||||| || ||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  18253761 aaggtaagggggttagttatcattataatcatgttcaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttactaaattcgtgc 18253860  T
Q  484 tcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||   |||| ||| |||||||||||||||||||||    
T  18253861 tccaactgtaatgatatgtttgtatgcatgaattg 18253895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 10264375 - 10264288
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtta 88  Q
    |||||||| |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10264375 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtta 10264288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 385 - 467
Target Start/End: Complemental strand, 15862257 - 15862174
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaatt 467  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15862257 aaggtaagggggttagttattatcataatcatgtataatttttgcattttctcatgttgtatgaaaatgggttgatgaacaatt 15862174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 13759088 - 13758996
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||| |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  13759088 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtaatgattagattttaccgttagtgac 13758996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 380 - 518
Target Start/End: Original strand, 14250811 - 14250950
Alignment:
Q  380 cttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaatt 478  Q
    |||| |||||||||||||||||||| ||| |||||||||  | |||| |||||||||||||||||||||||||||||||||||||||||  || ||||||    
T  14250811 cttctaaggtaagggggttagttatcatcgtaatcatgttcattttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgttaaatt 14250910  T
Q  479 cgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||| ||| ||| ||| ||  | |||||||||||    
T  14250911 cgtgctcttgttgtaatgctattttcttgtgcatgaattg 14250950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 48756727 - 48756819
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||| |||||||||||||||||| || || ||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  48756727 atggtaattttggtgagaattattttaatagttagtgagaacctttattttactaagttactagtgtagtgattagattttaccgttagtgac 48756819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 385 - 518
Target Start/End: Original strand, 48622584 - 48622718
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgc 483  Q
    |||||||||||||| ||| | ||||||||||  |  || ||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||    
T  48622584 aaggtaagggggtttgttttcatcataatcaattcaaatttttgcattttctcatgttttacgaaaatgggttgatgaacaattgatgctaaattcgtgc 48622683  T
Q  484 tcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||| |||||||| ||| ||  | |||||||||||    
T  48622684 tcttactgtgatgatattttcttgtgcatgaattg 48622718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 385 - 488
Target Start/End: Complemental strand, 16418835 - 16418731
Alignment:
Q  385 aaggtaagggggttagttattatcataatca-tgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgc 483  Q
    |||||||||||||| ||| | |||||||||| | |  |||||| ||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  16418835 aaggtaagggggtttgttttcatcataatcaatttcaaattttacatcttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgc 16418736  T
Q  484 tcttg 488  Q
    |||||    
T  16418735 tcttg 16418731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 42055826 - 42055900
Alignment:
Q  19 attattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    ||||||||| ||||| ||||| |||||||||||||||||||||||  ||||||||||| ||||||||||||||||    
T  42055826 attattttaataattagtgagaacccttattttactaagttactaaggtagtgattagattttaccgttagtgac 42055900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 385 - 488
Target Start/End: Original strand, 10000288 - 10000392
Alignment:
Q  385 aaggtaagggggttagttattatcataatca-tgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgc 483  Q
    |||||||||||||| ||  | |||||||||| | |  |||||||||| |||||||||||||| ||||||||||||||||||||| |||  ||||||||||    
T  10000288 aaggtaagggggtttgtcttcatcataatcaatttcaaattttgcatcttctcatgttgtataaaaatgggttgatgaacaatttatgtcaaattcgtgc 10000387  T
Q  484 tcttg 488  Q
    |||||    
T  10000388 tcttg 10000392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 9999920 - 9999983
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactag 64  Q
    |||||||| |||||||||||||||||| ||||| ||||| |||||||||||| |||||||||||    
T  9999920 atggtaattttggtgagaattattttaataattagtgagaacccttattttattaagttactag 9999983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 13321267 - 13321219
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||    
T  13321267 tgctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattg 13321219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 113
Target Start/End: Complemental strand, 16920300 - 16920188
Alignment:
Q  4 gtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggt 100  Q
    ||||| ||||||||||||||||| | |  || ||||| ||| |||||||||||||||||||| ||||| |||||| |||||||||| ||||||||||| |    
T  16920300 gtaattttggtgagaattatttttagtgtttagtgagaaccattattttactaagttactagggtagtaattagtattttaccgttaagtgaccgttgtt 16920201  T
Q  101 tatattttaccgt 113  Q
      |||||||||||    
T  16920200 agtattttaccgt 16920188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 47481043 - 47481091
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||    
T  47481043 tgctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattg 47481091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 87
Target Start/End: Original strand, 17223503 - 17223558
Alignment:
Q  32 ttggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt 87  Q
    |||||||| ||| |||||||||||||||||||||||||| |||||| |||||||||    
T  17223503 ttggtgagaaccattattttactaagttactagtgtagtaattagtatttaccgtt 17223558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 15516719 - 15516793
Alignment:
Q  342 ctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcat 416  Q
    ||||||||||||||||||| ||  ||| || |||||| ||||||| ||||||||||||||  |||||||||||||    
T  15516719 ctaggagctgaattgaagcaagagttagggttaatcatcttcaaatgtaagggggttagtctttatcataatcat 15516793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 45451740 - 45451820
Alignment:
Q  78 ttttaccgtt-agtgaccgttggttatattttaccgttgttagt-aattaccgttgagtgtatagaaac--ttttgaattg 154  Q
    |||||||||| ||||||||||||  ||||||||||||| ||||| ||||||||||| ||||||||||||  ||||||||||    
T  45451740 ttttaccgtttagtgaccgttggagatattttaccgttattagtgaattaccgttgtgtgtatagaaacatttttgaattg 45451820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 227
Target Start/End: Original strand, 2189858 - 2189924
Alignment:
Q  161 aatgggttaggcccattagaatttgagttgagcccattagtggagatgacactagggtcgtcttaga 227  Q
    ||||||||| ||||| |||||  |  ||||||||||||||||||||| |||||||||| ||||||||    
T  2189858 aatgggttaagcccactagaaactaggttgagcccattagtggagataacactagggttgtcttaga 2189924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 9081369 - 9081260
Alignment:
Q  4 gtaatcttggtgagaattattttattaattggtgaggaccctta-ttttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggt 100  Q
    ||||| |||||||||||||||||| |  || ||||| ||| ||| |||| |||||||||||| ||||| ||||||  ||||||||| |||||||||||||    
T  9081369 gtaattttggtgagaattattttagtggttagtgagaaccgttatttttgctaagttactagggtagtaattagtactttaccgttaagtgaccgttggt 9081270  T
Q  101 tatattttac 110  Q
      ||||||||    
T  9081269 agtattttac 9081260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 14268415 - 14268496
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatattttaccgtt 114  Q
    ||||| ||| ||||||||||||||||||||||| || |||||| |||||||||| ||||| ||||| |  ||||||||||||    
T  14268415 gtgagaaccattattttactaagttactagtgtggttattagtattttaccgttaagtgatcgttgttggtattttaccgtt 14268496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 12247650 - 12247718
Alignment:
Q  48 ttttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatattttaccgtt 114  Q
    ||||||||||||||||| ||||| |||| | |||||||||| |||||| |||||| |||||||||||||    
T  12247650 ttttactaagttactagagtagtaattaatattttaccgtttagtgactgttggtaatattttaccgtt 12247718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 13037026 - 13037074
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||| |||||||||||||||||||||    
T  13037026 tgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattg 13037074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 16212017 - 16211969
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||| |||||||||||||||||||||    
T  16212017 tgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattg 16211969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 16569536 - 16569604
Alignment:
Q  48 ttttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatattttaccgtt 114  Q
    ||||||||||||||||| ||| | |||| | |||||||||| ||||||||||||| |||||||||||||    
T  16569536 ttttactaagttactagagtaataattaatattttaccgtttagtgaccgttggtgatattttaccgtt 16569604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 114
Target Start/End: Complemental strand, 16596126 - 16596058
Alignment:
Q  48 ttttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatattttaccgtt 114  Q
    ||||||||||||||||| ||| | |||| | |||||||||| ||||||||||||| |||||||||||||    
T  16596126 ttttactaagttactagagtaataattaatattttaccgtttagtgaccgttggtgatattttaccgtt 16596058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 7293576 - 7293509
Alignment:
Q  161 aatgggttaggcccattagaatttgagttgagcccattagtggagatgacactagggtcgtcttagaa 228  Q
    ||||||||| ||||| |||||  | |||| ||||||||||||||||| |||||||||| || ||||||    
T  7293576 aatgggttaagcccactagaaactaagttaagcccattagtggagataacactagggttgtgttagaa 7293509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 13378234 - 13378171
Alignment:
Q  36 tgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgtt 97  Q
    |||| ||| |||||||||||||||||||| ||||| |||||| |||||||||| ||||||||||    
T  13378234 tgagaaccattattttactaagttactagggtagtaattagtattttaccgttaagtgaccgtt 13378171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 16914437 - 16914551
Alignment:
Q  4 gtaatcttggtgagaatta-ttttattaattggtgaggacccttatttt-actaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttgg 99  Q
    ||||| ||||||||||||| ||||| |  || ||||| ||| ||||||| |||||||||||||||| || |||||| |||||||||| |||||| ||||     
T  16914437 gtaattttggtgagaattaattttagtgtttagtgagaaccattatttttactaagttactagtgtggttattagtattttaccgttaagtgactgttgt 16914536  T
Q  100 ttatattttaccgtt 114  Q
    |  ||||||||||||    
T  16914537 tagtattttaccgtt 16914551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 78
Target Start/End: Complemental strand, 46474664 - 46474631
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagtt 78  Q
    |||||||||||||||||||||||||| |||||||    
T  46474664 ttattttactaagttactagtgtagtaattagtt 46474631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 11516478 - 11516430
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||    
T  11516478 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattg 11516430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 11580751 - 11580799
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||  |||||||||||||||||||||    
T  11580751 tgctaaattcgtgctccaactgtgataatatgtttgtatgcatgaattg 11580799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 114
Target Start/End: Complemental strand, 13321674 - 13321638
Alignment:
Q  78 ttttaccgttagtgaccgttggttatattttaccgtt 114  Q
    ||||||||||||||||||||||| || ||||||||||    
T  13321674 ttttaccgttagtgaccgttggtgatgttttaccgtt 13321638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 15441576 - 15441624
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||    
T  15441576 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattg 15441624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 30262141 - 30262189
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||    
T  30262141 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattg 30262189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 114
Target Start/End: Complemental strand, 48357335 - 48357267
Alignment:
Q  48 ttttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatattttaccgtt 114  Q
    |||||||||||||||||||| || |||||| |||||||||| ||||| ||||| |  ||||||||||||    
T  48357335 ttttactaagttactagtgtggttattagtattttaccgttaagtgatcgttgttggtattttaccgtt 48357267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 177; Significance: 3e-95; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 24549701 - 24549473
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  24549701 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttgat 24549602  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaatttgagttgagcccattag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||     
T  24549601 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattatattttgagttaagcccattaa 24549502  T
Q  201 tggagatgacactagggtcgtcttagaat 229  Q
     || ||| |||||||||| ||||||||||    
T  24549501 gggggataacactagggttgtcttagaat 24549473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 168; E-Value: 8e-90
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 30121443 - 30121197
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  30121443 atggtaattttggtgagaatcattttattaattagtgagaacccttattttactaagttactagtgtagtaattagtttttaccgttagtgacctttggt 30121344  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaac-ttttgaattgtgttagaatgggttaggcccattagaatttgagttgagcccatt- 198  Q
    || || ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  30121343 tagatgttaccgttgttagtaattatcgttgagtgtatagaaactttttgaattgtgttagaatgggttaggcccattagaatttgagttgagcccatta 30121244  T
Q  199 agtggagatgacactagggtcgtcttagaatagttattcatttcacaa 246  Q
    ||||| ||| |||||||||| ||| |||||| |||||||| |||||||    
T  30121243 agtgg-gataacactagggttgtcatagaattgttattcacttcacaa 30121197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 17142556 - 17142786
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| ||||| ||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  17142556 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttatcagtgtagtgattagtttttaccgttagtgaccgttggt 17142655  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt-gaattgtgttagaatgggttaggcccattagaa-tttgagttgagcccatt 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  17142656 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttagaattatgttagaatgggttaggcccattagaattttgagttgagcccatt 17142755  T
Q  199 agtggagatgacactagggtcgtcttagaat 229  Q
    |  |||||| |||||||||| ||| ||||||    
T  17142756 aagggagataacactagggttgtcatagaat 17142786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 314 - 518
Target Start/End: Complemental strand, 24549387 - 24549185
Alignment:
Q  314 gggaagctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataat 413  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||    
T  24549387 gggaagcttgaggaatcaagtgggtgacctaggagctgaagtgaagctagggttaaggataatcaacttctaaggtaagggggttagtgattatcataat 24549288  T
Q  414 catgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatg 513  Q
    |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  24549287 catgt--aattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctagattcgtgctcttactgtgatgttatgtttgtatgcatg 24549190  T
Q  514 aattg 518  Q
    |||||    
T  24549189 aattg 24549185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 308 - 517
Target Start/End: Complemental strand, 30121137 - 30120927
Alignment:
Q  308 gttgaagggaagctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattat 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||  |||||||| |||||||||||||||||||||| |||||    
T  30121137 gttgaagggaagctttaggaatcaagtgggtgacctaggagctgaattgaagtaagggttagagataatcatcttcaaaggtaagggggttagtgattat 30121038  T
Q  408 cataatcatgtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgt 506  Q
    ||||||||||||||| ||||| ||  |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30121037 cataatcatgtgtaatttttgtataatctcatgttgtatgaaaatgagttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgt 30120938  T
Q  507 atgcatgaatt 517  Q
    |||||||||||    
T  30120937 atgcatgaatt 30120927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 314 - 518
Target Start/End: Original strand, 21851810 - 21852013
Alignment:
Q  314 gggaagctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataat 413  Q
    ||||||||| |||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  21851810 gggaagcttgaggaatcaagtgggtgacctagaagctgaagtggagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcacaat 21851909  T
Q  414 catgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatg 513  Q
    |||||  | |||||||||| |||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  21851910 catgt-aatttttgcatttgctcatgttgtatgaaattgggttgatgaacaattcatgtcaaattcgtgctcttgctgtgatgttatgtttgtatgcatg 21852008  T
Q  514 aattg 518  Q
    |||||    
T  21852009 aattg 21852013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 6773793 - 6774021
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  6773793 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttt-accgttagtgaccgttgat 6773891  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaa-tttgagttgagcccatta 199  Q
    ||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||| |||||||||    
T  6773892 tatattttaccattgttagtatttaccgtcgagtgtatagaaacttttgaattgtattaaaatgggttaggcccattagaattttgagttaagcccatta 6773991  T
Q  200 gtggagatgacactagggtcgtcttagaat 229  Q
      || ||| |||||||||| ||||||||||    
T  6773992 agggggataacactagggttgtcttagaat 6774021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 314 - 518
Target Start/End: Original strand, 6774105 - 6774306
Alignment:
Q  314 gggaagctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataat 413  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||| |||||||||||    
T  6774105 gggaagcttgaggaatcaagtgggtgac-taggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagtgattatcataat 6774203  T
Q  414 catgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatg 513  Q
    |||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  6774204 catgt--aattttgcattttctcatgttatatgaaaatgggttgatgaacaattcatgctagattcgtgctcttactgtgatgttatgtttgtatgcatg 6774301  T
Q  514 aattg 518  Q
    |||||    
T  6774302 aattg 6774306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 21844103 - 21844330
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| ||||| ||||| ||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  21844103 atggtaat-ttggtgagaattattttaataattagtgagaacccttattatactaagttactagtgtaatgattagtttt-accgttagtgaccgttggt 21844200  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaa-tttgagttgagcccatta 199  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||    
T  21844201 tatattttaccgttgttagtaattaccgtggagtgtacagaaacttttgaattgtgttaggatgggttaggcccattagaattttgagttaagcccatta 21844300  T
Q  200 gtggagatgacactagggtcgtcttagaat 229  Q
      || ||| |||||||||| ||||||||||    
T  21844301 agggggataacactagggttgtcttagaat 21844330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 21851496 - 21851723
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| ||||| ||||| ||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  21851496 atggtaat-ttggtgagaattattttaataattagtgagaacccttattatactaagttactagtgtaatgattagtttt-accgttagtgaccgttggt 21851593  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaa-tttgagttgagcccatta 199  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||    
T  21851594 tatattttaccgttgttagtaattaccgtggagtgtacagaaacttttgaattgtgttaggatgggttaggcccattagaattttgagttaagcccatta 21851693  T
Q  200 gtggagatgacactagggtcgtcttagaat 229  Q
      || ||| |||||||||| ||||||||||    
T  21851694 agggggataacactagggttgtcttagaat 21851723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 314 - 518
Target Start/End: Original strand, 21844417 - 21844620
Alignment:
Q  314 gggaagctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataat 413  Q
    ||||||||| |||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  21844417 gggaagcttgaggaatcaagtgggtgacctagaagctgaagtggagctaggattaaggataatcaacttcaacggtaagggggttagttattatcacaat 21844516  T
Q  414 catgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatg 513  Q
    |||||  | |||||||||| |||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  21844517 catgt-aatttttgcatttgctcatgttgtatgaaattgggttgatgaacaattcatgtcaaattcgtgctcttgctgtgatgttatgtttgtatgcatg 21844615  T
Q  514 aattg 518  Q
    |||||    
T  21844616 aattg 21844620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 15318682 - 15318902
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||| |||||| || || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  15318682 atggtaattttggtgagaatcattttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttcgt 15318781  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||| ||||||||||||||||||| || ||||||||||    
T  15318782 tatattttaccgttgttagtaattaccgttgagtggatagaaactttttggaattatgttagaatgagttaggcccattagaatttggaattgagcccat 15318881  T
Q  198 tagtggagatgacactagggt 218  Q
    ||  |||||| ||| ||||||    
T  15318882 taagggagataacattagggt 15318902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 15499051 - 15499271
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||| |||||| || || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  15499051 atggtaattttggtgagaatcattttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttcgt 15499150  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||| ||||||||||||||||||| || ||||||||||    
T  15499151 tatattttaccgttgttagtaattaccgttgagtggatagaaactttttggaattatgttagaatgagttaggcccattagaatttggaattgagcccat 15499250  T
Q  198 tagtggagatgacactagggt 218  Q
    ||  |||||| ||| ||||||    
T  15499251 taagggagataacattagggt 15499271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 22088317 - 22088537
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||| |||||| || || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  22088317 atggtaattttggtgagaatcattttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttcgt 22088416  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||| |||| |||||||||||||| || ||||||||||    
T  22088417 tatattttaccgttgttagtaattaccgttgagtgtatataaactttttggaattatgttagaatgagttaagcccattagaatttggaattgagcccat 22088516  T
Q  198 tagtggagatgacactagggt 218  Q
    ||  |||||| ||| ||||||    
T  22088517 taagggagataacattagggt 22088537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 22005783 - 22006014
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttgg 99  Q
    |||||||| |||||||||||||||||| || || ||||| |||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||    
T  22005783 atggtaattttggtgagaattattttaatatttagtgagaacccttattttactaagttactagtacagtgattagtttttaccgtttagtgaccgttgg 22005882  T
Q  100 ttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagccca 196  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||| || |||||||||    
T  22005883 ttatgttttaccattgttagtaattaccgttgagtgtatagaaactttttagaattatgttagaatgggttaggcccattagaatttagaattgagccca 22005982  T
Q  197 ttagtggagatgacactagggtcgtcttagaa 228  Q
    |||  |||||| ||| |||||| ||| |||||    
T  22005983 ttaagggagataacattagggttgtcatagaa 22006014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 5 - 179
Target Start/End: Original strand, 13661792 - 13661969
Alignment:
Q  5 taatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttggttat 103  Q
    |||| |||||||||||||||||| || || ||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  13661792 taattttggtgagaattattttaatatttagtgagaacccttattttactaagttactagtgtagtgattaatttttaccgtttagtgaccgttggttat 13661891  T
Q  104 attttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    ||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||    
T  13661892 attttactgttgttagtaattaccgttgagtgtatagaaactttttagaattgtgttagaatgggttaagcccattag 13661969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 5 - 179
Target Start/End: Original strand, 13720455 - 13720632
Alignment:
Q  5 taatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttggttat 103  Q
    |||| |||||||||||||||||| || || ||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  13720455 taattttggtgagaattattttaatatttagtgagaacccttattttactaagttactagtgtagtgattaatttttaccgtttagtgaccgttggttat 13720554  T
Q  104 attttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    ||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||    
T  13720555 attttactgttgttagtaattaccgttgagtgtatagaaactttttagaattgtgttagaatgggttaagcccattag 13720632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 270883 - 271103
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||| |||||| || ||  |||| ||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||| ||    
T  270883 atggtaattttggtgagaatcattttaatatttaatgagaacccttattttaccaagttactagtgtaatgattagtttttatcgttagtgaccgttcgt 270982  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||| ||||||||||||||||||| || ||||||||||    
T  270983 tatattttaccgttgttagtaattaccgttgagtggatagaaactttttggaattatgttagaatgagttaggcccattagaatttggaattgagcccat 271082  T
Q  198 tagtggagatgacactagggt 218  Q
    ||  |||||| ||| ||||||    
T  271083 taagggagataacattagggt 271103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 645037 - 644817
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||| |||||| || ||  |||| ||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||| ||    
T  645037 atggtaattttggtgagaatcattttaatatttaatgagaacccttattttaccaagttactagtgtaatgattagtttttatcgttagtgaccgttcgt 644938  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||| ||||||||||||||||||| || ||||||||||    
T  644937 tatattttaccgttgttagtaattaccgttgagtggatagaaactttttggaattatgttagaatgagttaggcccattagaatttggaattgagcccat 644838  T
Q  198 tagtggagatgacactagggt 218  Q
    ||  |||||| ||| ||||||    
T  644837 taagggagataacattagggt 644817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 830772 - 830552
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||| |||||| || ||  |||| ||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||| ||    
T  830772 atggtaattttggtgagaatcattttaatatttaatgagaacccttattttaccaagttactagtgtaatgattagtttttatcgttagtgaccgttcgt 830673  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||| ||||||||||||||||||| || ||||||||||    
T  830672 tatattttaccgttgttagtaattaccgttgagtggatagaaactttttggaattatgttagaatgagttaggcccattagaatttggaattgagcccat 830573  T
Q  198 tagtggagatgacactagggt 218  Q
    ||  |||||| ||| ||||||    
T  830572 taagggagataacattagggt 830552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 18613134 - 18612952
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||||| ||||||||||||||||| | |  || ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  18613134 atggtaattttggtgagaattatttttaatgtttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgatcgttg 18613035  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||    
T  18613034 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttttagaattgtgttagaatgggttaagcccattag 18612952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 22148176 - 22147994
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||||| ||||||||||||||||| | ||  | ||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  22148176 atggtaattttggtgagaattatttttaatatattgtgagaacccttattttagtaagttactagtgtagtgattagtttttaccgtttagtgaccgttg 22148077  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||    
T  22148076 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttttagaattgtgttagaatgggttaagcccattag 22147994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 3430786 - 3430932
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| || || ||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  3430786 atggtaattttggtgagaattattttaatagttagtgagaacctttattttactaagttactagtgtagtgattagtttttagcgttagtgaccgttggt 3430885  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttt 147  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  3430886 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttt 3430932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 334 - 496
Target Start/End: Original strand, 271227 - 271390
Alignment:
Q  334 tgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 432  Q
    ||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  271227 tgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttattatcataatcatgtacaatctttgcattt 271326  T
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    ||||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||    
T  271327 tctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatg 271390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 334 - 496
Target Start/End: Complemental strand, 644693 - 644530
Alignment:
Q  334 tgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 432  Q
    ||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  644693 tgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttattatcataatcatgtacaatctttgcattt 644594  T
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    ||||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||    
T  644593 tctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatg 644530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 334 - 496
Target Start/End: Complemental strand, 830428 - 830265
Alignment:
Q  334 tgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 432  Q
    ||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  830428 tgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttattatcataatcatgtacaatctttgcattt 830329  T
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    ||||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||    
T  830328 tctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatg 830265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 334 - 495
Target Start/End: Original strand, 15319026 - 15319188
Alignment:
Q  334 tgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 432  Q
    ||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  15319026 tgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttattatcataatcatgtacaatctttgcattt 15319125  T
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgat 495  Q
    ||||||||||||||||||||||||| |||||||||  || |||||||||||||||||||||||    
T  15319126 tctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgat 15319188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 334 - 495
Target Start/End: Original strand, 15499395 - 15499557
Alignment:
Q  334 tgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 432  Q
    ||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  15499395 tgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttattatcataatcatgtacaatctttgcattt 15499494  T
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgat 495  Q
    ||||||||||||||||||||||||| |||||||||  || |||||||||||||||||||||||    
T  15499495 tctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgat 15499557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 321 - 517
Target Start/End: Original strand, 16674245 - 16674439
Alignment:
Q  321 tttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgt 420  Q
    ||||||||||||||||||||| || ||||||||||||||| ||  || ||  |||||  |||| ||||||||||||||||||||||||| ||||||||      
T  16674245 tttaggaatcaagtgggtgacttatgagctgaattgaagcaagagttgagt-taatcttcttctaaggtaagggggttagttattatcacaatcatgta- 16674342  T
Q  421 aattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaatt 517  Q
    | |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  16674343 atttttgcatttgctcatgttgtatgaaaatgggttgttgaacaattcatgctaaattcgtgctctttctgtgatgttatgtttttatgcatgaatt 16674439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 2545685 - 2545503
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||||| ||||||||||||||||| | ||  | ||||| |||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||    
T  2545685 atggtaattttggtgagaattatttttaatatattgtgagaacccttattttactaagttactagtgtaatgattagtttttaccgtttaatgaccgttg 2545586  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||  ||||||||||||||||||||| |||||||||    
T  2545585 gttatattttaccgttgttagtaattaccgttgagtgtttaaaaactttttagaattgtgttagaatgggttaagcccattag 2545503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 16038397 - 16038579
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttag-tgaccgttg 98  Q
    |||||||| ||||||||||||||||| | || || ||||| |||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||    
T  16038397 atggtaattttggtgagaattatttttaatatttagtgagaacccttattttactaagttactagtgtactgattagtttttaccgtttggtgaccgttg 16038496  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||||| |||||||||    
T  16038497 gttataatttactgttgttagtaattaccgttgagtgtatagaaactttttagaattgtattagaatgggttaagcccattag 16038579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 334 - 496
Target Start/End: Original strand, 22088661 - 22088824
Alignment:
Q  334 tgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 432  Q
    ||||||||||||||||||||||||||| ||| |||  |||||||||||||||||||||||||||||||||| |||||||||||||  ||| |||||||||    
T  22088661 tgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttatcatcataatcatgtacaatctttgcattt 22088760  T
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    |||||||||||||||||||| |||| |||||||||  || ||||||||||||||||||||||||    
T  22088761 tctcatgttgtatgaaaatgtgttggtgaacaattgttgttaaattcgtgctcttgctgtgatg 22088824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 343 - 518
Target Start/End: Original strand, 22006134 - 22006310
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||||||||||||||| ||  ||   | |||||  |||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  22006134 taggagctgaattgaagcaagagtttgagttaatcttcttcaaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgtt 22006233  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||| ||  | |||||||||||    
T  22006234 gtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattg 22006310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 343 - 518
Target Start/End: Original strand, 13720804 - 13720980
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||||||||||||||| ||  ||  || |||||  |||| ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  13720804 taggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgtt 13720903  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||| ||| ||  | |||||||||||    
T  13720904 gtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgttgtgatgctattttcttgtgcatgaattg 13720980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 16195950 - 16195730
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||| |||||||||||| || || ||||| ||||||||||||||||||||  |||||||||||||||||||||||||          | |    
T  16195950 atggtaattttggttagaattattttaatatttagtgagaacccttattttactaagttatcagtgtagtgattagtttttaccgtt----------gat 16195861  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||  || || |||||||||||||||||||||||| ||||| || ||||||||||    
T  16195860 tatattttaccattgttagtaattaccgttgagtgtatagaaactttttagagttatgttagaatgggttaggcccattaaaatttagaattgagcccat 16195761  T
Q  198 tagtggagatgacactagggtcgtcttagaa 228  Q
    ||   ||||| ||| |||||| ||| |||||    
T  16195760 taagcgagataacattagggttgtcatagaa 16195730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 343 - 496
Target Start/End: Original strand, 13662141 - 13662295
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||||||||||||||| ||  ||  || |||||  |||| ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  13662141 taggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgtt 13662240  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    |||||||||||||||||| |||||||  |||||||||||||||||||||||||||    
T  13662241 gtatgaaaatgggttgataaacaattgttgctaaattcgtgctcttgctgtgatg 13662295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 343 - 518
Target Start/End: Complemental strand, 16195611 - 16195435
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||| ||||||||||| ||  ||  || |||||| |||| ||||||||||||||| ||||||||||||||||||  |||||| |||||||||||||||    
T  16195611 taggagttgaattgaagcaagagtttgggttaatcatcttctaaggtaagggggttaattattatcataatcatgtacaatttttgcattttctcatgtt 16195512  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||||||||||||  |||||||||||| ||| |||||||||| ||||||  | |||||||||||    
T  16195511 gtatgaaaatgggttgatgaacaattgttgctaaattcgttctcgtgctgtgatgctatgttcttgtgcatgaattg 16195435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 22906756 - 22906865
Alignment:
Q  5 taatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttata 104  Q
    |||| ||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |    
T  22906756 taattttggtgagaatcattttattaattagtgagaacccttattttactaagttactagtgtggtgattagtttttaccgttagtgaccgttggttaca 22906855  T
Q  105 ttttaccgtt 114  Q
    ||||||||||    
T  22906856 ttttaccgtt 22906865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 380 - 518
Target Start/End: Original strand, 16872964 - 16873103
Alignment:
Q  380 cttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaatt 478  Q
    |||| ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||   ||||||||    
T  16872964 cttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgtggctaaatt 16873063  T
Q  479 cgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||| ||| ||||||| ||  | |||||||||||    
T  16873064 cgtgctcttgttgtaatgttattttcttgtgcatgaattg 16873103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 21493967 - 21494143
Alignment:
Q  4 gtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttggtt 101  Q
    ||||| ||||||||||||||||| | |  || ||||| ||| |||||||||||||| ||||||||| | |||||||||||||| ||| ||||||||||||    
T  21493967 gtaattttggtgagaattatttttagtgtttagtgagaaccattattttactaagtcactagtgtactaattagtttttaccgtttaatgaccgttggtt 21494066  T
Q  102 atattttaccgttgttagtaa-ttaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggccca 175  Q
    ||||||||| ||||||||||| ||||||||||||||||||||||||||  || || ||||||||| ||||| |||||    
T  21494067 atattttactgttgttagtaatttaccgttgagtgtatagaaactttttagagttatgttagaattggttaagccca 21494143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 24105735 - 24105840
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttg 98  Q
    |||||||| ||||||||||||||||| | || || ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  24105735 atggtaattttggtgagaattatttttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgttg 24105834  T
Q  99 gttata 104  Q
    ||||||    
T  24105835 gttata 24105840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 16878261 - 16878353
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||| |||||||||||||||||| || || ||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16878261 atggtaattttggtgagaattattttaatagttagtgagaacctttattttactaagttactagtgtagtgattagattttaccgttagtgac 16878353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 17346265 - 17346179
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt 87  Q
    |||||||| |||||||||||||||||| || || ||||| |||||||||||||||||||||||||||||||||||  ||||||||||    
T  17346265 atggtaattttggtgagaattattttaatatttagtgagaacccttattttactaagttactagtgtagtgattatattttaccgtt 17346179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 17353260 - 17353186
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgatta 75  Q
    |||||||| |||||||||||||||||| || || ||||| |||||||||||||||||||||||||||||||||||    
T  17353260 atggtaattttggtgagaattattttaatatttagtgagaacccttattttactaagttactagtgtagtgatta 17353186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 23 - 93
Target Start/End: Complemental strand, 33532784 - 33532714
Alignment:
Q  23 ttttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    ||||| ||||| ||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  33532784 ttttaataattagtgagaacccttattttactaagttactagggtagtgattagattttaccgttagtgac 33532714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 23511955 - 23511875
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttt 80  Q
    |||||||| ||||||||||||||||| | || |  ||||| ||||||||||||||||||||||||||||||||||||||||    
T  23511955 atggtaattttggtgagaattatttttaatattaagtgagaacccttattttactaagttactagtgtagtgattagtttt 23511875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 984211 - 984298
Alignment:
Q  5 taatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtga 92  Q
    |||| ||||||||||| |||||| || ||  |||| ||||||||||||| |||||||||||||| ||||||||||||| |||||||||    
T  984211 taattttggtgagaatcattttaatatttaatgagaacccttattttaccaagttactagtgtaatgattagtttttatcgttagtga 984298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 123 - 228
Target Start/End: Complemental strand, 17346186 - 17346078
Alignment:
Q  123 ttaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccattagtggagatgacactagggtc 219  Q
    ||||||||||||||||| ||||||||  || || |||||||||| ||||||||||||||||||| || ||||||||||||  |||||| ||| ||||||     
T  17346186 ttaccgttgagtgtatataaactttttagagttatgttagaatgagttaggcccattagaatttagaattgagcccattaagggagataacattagggtt 17346087  T
Q  220 gtcttagaa 228  Q
    ||| |||||    
T  17346086 gtcatagaa 17346078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 23837964 - 23837851
Alignment:
Q  4 gtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggt 100  Q
    ||||| ||||||||||||||||| | |  || ||||| ||| |||| ||||||||||||||||||||| |||||| |||||||||| ||||||||||| |    
T  23837964 gtaattttggtgagaattatttttagtgtttagtgagaaccattatcttactaagttactagtgtagtaattagtattttaccgttaagtgaccgttgtt 23837865  T
Q  101 tatattttaccgtt 114  Q
     |||||||||||||    
T  23837864 aatattttaccgtt 23837851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 39 - 114
Target Start/End: Original strand, 39446286 - 39446364
Alignment:
Q  39 ggacccttattttactaagttactagtgtagtgattagt-ttttaccg--ttagtgaccgttggttatattttaccgtt 114  Q
    ||||| |||||||||||||||||||| ||||| |||||| ||||||||  ||||||||||||||| |||||||||||||    
T  39446286 ggaccgttattttactaagttactagagtagtaattagtattttaccgttttagtgaccgttggtgatattttaccgtt 39446364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 38534407 - 38534304
Alignment:
Q  10 ttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatatt 106  Q
    ||||||||||||||||| | |  || ||||| ||| |||||||||||||||||||| |||||||||||| |||||||||| |||||| ||||||  ||||    
T  38534407 ttggtgagaattatttttagtgtttagtgagaaccgttattttactaagttactagagtagtgattagtattttaccgttaagtgacagttggtagtatt 38534308  T
Q  107 ttac 110  Q
    ||||    
T  38534307 ttac 38534304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 16404987 - 16405035
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||| |||||||||||||||||||||    
T  16404987 tgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattg 16405035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 474 - 518
Target Start/End: Complemental strand, 17345816 - 17345772
Alignment:
Q  474 aaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||||||  |||||||||||||||| |||||||||||||    
T  17345816 aaattcgtgctctaactgtgatgttatgtttatatgcatgaattg 17345772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 45558478 - 45558521
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagtt 78  Q
    ||||||||| ||||||||||||||||||||||| || |||||||    
T  45558478 gtgaggaccattattttactaagttactagtgtggtaattagtt 45558521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 59 - 93
Target Start/End: Original strand, 16872648 - 16872682
Alignment:
Q  59 tactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||||||||||||| ||||||||||||||||    
T  16872648 tactagtgtagtgattagattttaccgttagtgac 16872682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 35 - 115
Target Start/End: Complemental strand, 17285938 - 17285856
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatattttaccgttg 115  Q
    ||||| ||| |||||||||||||||||||| ||| | |||||| ||||||| || ||||||||||| |  |||||||||||||    
T  17285938 gtgagaaccattattttactaagttactagggtaataattagtattttaccattaagtgaccgttgctagtattttaccgttg 17285856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 21197682 - 21197748
Alignment:
Q  50 ttactaagttactagtgtagtgattagt-ttttaccg-ttagtgaccgttggttatattttaccgtt 114  Q
    ||||||||||||||||||||| |||||| |||||||| | ||||||||||| |  ||||||||||||    
T  21197682 ttactaagttactagtgtagtaattagtattttaccgataagtgaccgttgctagtattttaccgtt 21197748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 464 - 518
Target Start/End: Original strand, 43373474 - 43373528
Alignment:
Q  464 aattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||| |||||||||||||||||   |||||||| || ||||||||||||||||||    
T  43373474 aattaatgctaaattcgtgctccaactgtgatgatacgtttgtatgcatgaattg 43373528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 5855348 - 5855235
Alignment:
Q  4 gtaatcttggtgagaattatt-ttattaattggtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggt 100  Q
    ||||| ||||||||||||||| ||| |  || ||||| ||| ||||||||||||||||| |||||  | |||||| |||||||||| ||| ||||||| |    
T  5855348 gtaattttggtgagaattattcttagtgtttagtgagaaccattattttactaagttaccagtgtgcttattagtattttaccgttaagtaaccgttgtt 5855249  T
Q  101 tatattttaccgtt 114  Q
      ||||||||||||    
T  5855248 agtattttaccgtt 5855235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 16872744 - 16872801
Alignment:
Q  161 aatgggttaggcccattagaatttgagttgagcccattagtggagatgacactagggt 218  Q
    ||||||||| ||||| |||||  |||||| ||||||||||| ||||| ||||||||||    
T  16872744 aatgggttaagcccactagaaactgagttaagcccattagtagagataacactagggt 16872801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 80
Target Start/End: Complemental strand, 22723825 - 22723780
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagtttt 80  Q
    ||||| ||| ||||||||||||||||||||||| || |||||||||    
T  22723825 gtgagaaccgttattttactaagttactagtgtggtaattagtttt 22723780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 98
Target Start/End: Complemental strand, 29307150 - 29307085
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttg 98  Q
    ||||| ||| ||||||||||||||||||||||| || |||||| |||||| ||| |||||||||||    
T  29307150 gtgagaaccattattttactaagttactagtgtggtaattagtattttactgttaagtgaccgttg 29307085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 5238338 - 5238290
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||    
T  5238338 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattg 5238290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 16193728 - 16193776
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||    
T  16193728 tgctaaattcgtgctccaactatgatgatatgtttgtatgcatgaattg 16193776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 22907226 - 22907274
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||    
T  22907226 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattg 22907274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 24661260 - 24661308
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||    
T  24661260 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattg 24661308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 24928803 - 24928851
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||  |||||||||||||||||||||    
T  24928803 tgctaaattcgtgctccaactgtgattatatgtttgtatgcatgaattg 24928851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 43685797 - 43685749
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||    
T  43685797 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattg 43685749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 175; Significance: 5e-94; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 27954768 - 27954590
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27954768 atggtaattttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 27954669  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattag 179  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27954668 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattag 27954590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 10644940 - 10644711
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||| | ||||||||| | ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10644940 atggtaattttggtggggattattttaatgattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 10644841  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattag-aatttgagttgagcccatta 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||    
T  10644840 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagcattttgagttaagcccatta 10644741  T
Q  200 gtggagatgacactagggtcgtcttagaat 229  Q
      || ||| |||||||||| ||||||||||    
T  10644740 agggggataacactagggttgtcttagaat 10644711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 314 - 518
Target Start/End: Complemental strand, 10644625 - 10644423
Alignment:
Q  314 gggaagctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataat 413  Q
    ||||||||| ||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  10644625 gggaagcttgaggaatcaagtgggtgatctaggagctgaagtgaagttaggattaaggataatcaacttcaaaggtaagggggttagttattatcacaat 10644526  T
Q  414 catgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatg 513  Q
    |||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  10644525 catgt--aattttgcatttgctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgctgtgatgttatgtttgtatgcatg 10644428  T
Q  514 aattg 518  Q
    |||||    
T  10644427 aattg 10644423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 18169698 - 18169480
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18169698 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 18169599  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||| || ||||||||||    
T  18169598 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttttagaattatgttagaatgggttaggcccattagaatttggaattgagcccat 18169499  T
Q  198 tagtggagatgacactagg 216  Q
    ||  |||||| ||| ||||    
T  18169498 taagggagataacattagg 18169480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 37477886 - 37477685
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  37477886 atggtaattttggtgagaattattttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttaatgaccgttggt 37477787  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  || || |||||||||| ||||||||||||||||||| || ||||||||||    
T  37477786 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttttagagttatgttagaatgagttaggcccattagaatttagaattgagcccat 37477687  T
Q  198 ta 199  Q
    ||    
T  37477686 ta 37477685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 41063517 - 41063734
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||| |||||| || || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  41063517 atggtaattttggtgagaatcattttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttcat 41063616  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaattt-gagttgagcccatta 199  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||| || ||||||||||||    
T  41063617 tatattttaccgttgttagtaattaccgtggagtgtatagaaacttttgaattgtgttaggatgggttagg-ccattagaatttggaattgagcccatta 41063715  T
Q  200 gtggagatgacactagggt 218  Q
      |||||| ||| ||||||    
T  41063716 agggagataacattagggt 41063734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 7131592 - 7131822
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||| |||||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  7131592 atggtaattttggtaagaattattttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttaatgaccgttggt 7131691  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||  || || |||||||||||||||||| ||||||||||| || ||||||||||    
T  7131692 tatattttaccgttgttagtaattaacgttgagtgtatagaaactttttagagttatgttagaatgggttaggctcattagaatttagaattgagcccat 7131791  T
Q  198 tagtggagatgacactagggtcgtcttagaa 228  Q
    ||  |||||| ||| |||||| ||| |||||    
T  7131792 taagggagataacattagggttgtcatagaa 7131822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 14996863 - 14996634
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||| |||||||||||| || || ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  14996863 atggtaattttggttagaattattttaatatttagtgagaacccttattttactaagttactagtgtggtgattagtttttaccgttagtgaccgttcgt 14996764  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||  ||||| |||||||||||||||||||||||||||||| || ||||||||||    
T  14996763 tatattttaccgttgttagtaattaccgtt-tgtgtatagaaactttttagaattatgttagaatgggttaggcccattagaatttggaattgagcccat 14996665  T
Q  198 tagtggagatgacactagggtcgtcttagaa 228  Q
    ||  |||||| ||| |||||| ||| |||||    
T  14996664 taagggagataacattagggttgtcatagaa 14996634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 9795954 - 9795773
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||||| ||||||||||||||||| | || || ||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  9795954 atggtaattttggtgagaattatttttaatatttagtgagaacccttattttactaagtgactagtgtagtgattagtttttaccgtttagtgaccgttg 9795855  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt-gaattgtgttagaatgggttaggcccattag 179  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||    
T  9795854 gttatattttaccgttgttagtaattaccgttgagtgtttagaaacttttagaattgtgttagaatgggttaagcccattag 9795773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 8378894 - 8378747
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||| |||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8378894 atggtaattttgatgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 8378795  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt 148  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||    
T  8378794 tataatttaccgttgttagtaattaccgttgagtgtatagaaactttt 8378747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 19021213 - 19021031
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||||| ||||||||||||||||| | |  || ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19021213 atggtaattttggtgagaattatttttaatgtttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgttg 19021114  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||| |||||||||    
T  19021113 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttttagaattatgttagaatgggttaagcccattag 19021031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 19696891 - 19697073
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||||| ||||||||||||||||| | ||  | || || ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  19696891 atggtaattttggtgagaattatttttaatatattgtaagaacccttattttactaagttactagtgtagtgattagtttttaccgtttaatgaccgttg 19696990  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||| |||||||||    
T  19696991 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttttaaaattgtgttagaatgggttaagcccattag 19697073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 19707476 - 19707658
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||||| ||||||||||||||||| | ||  | || || ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  19707476 atggtaattttggtgagaattatttttaatatattgtaagaacccttattttactaagttactagtgtagtgattagtttttaccgtttaatgaccgttg 19707575  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||| |||||||||    
T  19707576 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttttaaaattgtgttagaatgggttaagcccattag 19707658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 26680926 - 26680771
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| ||||| ||||| | ||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||    
T  26680926 atggtaattttggtgagaattattttaataattagtgagaaaccttattttactaagttaccagtgtaatgattagtttttaccgttagtgaccgtcggt 26680827  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtg 156  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  26680826 tatattttactgttgttagtaattaccgtggagtgtatagaaacttttgaattgtg 26680771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 343 - 518
Target Start/End: Complemental strand, 47358030 - 47357858
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaattttgcattttctcatgttg 442  Q
    |||||||||||||||||| ||  ||  || |||||  |||| ||||||||||||||||||||||||| ||||||||  |||||||||||| |||||||||    
T  47358030 taggagctgaattgaagcaagagttg-ggttaatcttcttctaaggtaagggggttagttattatcacaatcatgt--aattttgcatttcctcatgttg 47357934  T
Q  443 tatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  47357933 tatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatggattg 47357858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 16523567 - 16523389
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||||| |||||| |||||||||| | || || || || ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  16523567 atggtaattttggtgtgaattatttttaatatttagtaagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgactgttg 16523468  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggccca 175  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||    
T  16523467 gttatgttttaccgttgttagtaattaccgttgagtgtatagaaactttttagaattgtgttagaatgggttaagccca 16523389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 318 - 496
Target Start/End: Original strand, 15287096 - 15287275
Alignment:
Q  318 agctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatg 417  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||  ||  || |||||  |||| |||||||||||||||||||||||||||||||||    
T  15287096 agctttaggaatcaagtgggtgacttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatg 15287195  T
Q  418 tgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    |  |||||| |||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||||||||||||    
T  15287196 tacaatttttgcattttctcatgttgtatgaaaatgggatgatgaacaattatagctaaattcgtgctcttgctgtgatg 15287275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 318 - 496
Target Start/End: Original strand, 15294205 - 15294384
Alignment:
Q  318 agctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatg 417  Q
    |||||||||||| ||||||||||| |||||||||||||||||| ||  ||  || |||||  |||| |||||||||||||||||||||||||||||||||    
T  15294205 agctttaggaatgaagtgggtgacttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatg 15294304  T
Q  418 tgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    |  |||||| |||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||||||||||||    
T  15294305 tacaatttttgcattttctcatgttgtatgaaaatgggatgatgaacaattatagctaaattcgtgctcttgctgtgatg 15294384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 318 - 518
Target Start/End: Complemental strand, 18169375 - 18169174
Alignment:
Q  318 agctttaggaatcaagtggg-tgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcat 416  Q
    ||||| ||||||||| |||| | | ||||||||||||||||||| || |||| || |||||  |||||| ||||||||||||||||||||||||||||||    
T  18169375 agcttgaggaatcaattggggtaagctaggagctgaattgaagcaagaattagggttaatcttcttcaa-ggtaagggggttagttattatcataatcat 18169277  T
Q  417 gtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaa 515  Q
    ||  |||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||| ||  | ||||||||    
T  18169276 gtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaa 18169177  T
Q  516 ttg 518  Q
    |||    
T  18169176 ttg 18169174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 18248927 - 18248805
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttgg 99  Q
    |||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18248927 atggtaattttggtgagaattattttaataattggtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgttgg 18248828  T
Q  100 ttatattttaccgttgttagtaa 122  Q
    ||||| |||||||||||||||||    
T  18248827 ttataatttaccgttgttagtaa 18248805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 22351592 - 22351705
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22351592 atggtaattttggtgagaattattttaataattggtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 22351691  T
Q  101 tatattttaccgtt 114  Q
    || |||||||||||    
T  22351692 tacattttaccgtt 22351705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 318 - 488
Target Start/End: Original strand, 22351915 - 22352086
Alignment:
Q  318 agctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatca-t 416  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||  ||  || |||||  |||| ||||||||||||||||||||||||||||||| |    
T  22351915 agctttaggaatcaagtgggtgacttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcaat 22352014  T
Q  417 gtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttg 488  Q
     |  |||||| ||| ||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||    
T  22352015 ttcaaattttacatcttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcatgctcttg 22352086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 15293882 - 15293995
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||| | ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15293882 atggtaattttggtgagaattatttgaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 15293981  T
Q  101 tatattttaccgtt 114  Q
    || |||||||||||    
T  15293982 tacattttaccgtt 15293995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 15286773 - 15286883
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||| | ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15286773 atggtaattttggtgagaattatttgaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 15286872  T
Q  101 tatattttacc 111  Q
    || ||||||||    
T  15286873 tacattttacc 15286883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 343 - 518
Target Start/End: Original strand, 7131941 - 7132117
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||||||||||||||| ||  ||  |  |||||  |||| ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  7131941 taggagctgaattgaagcaagagtttggattaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgtt 7132040  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
     |||||||||||||||||||||||||  ||||||||||||||||||| ||||||| ||| ||  | |||||||||||    
T  7132041 atatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgttgtgatgctattttcttgtgcatgaattg 7132117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 343 - 518
Target Start/End: Complemental strand, 20001103 - 20000927
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||||| ||||||||| ||  ||  || |||||  |||| ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  20001103 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgtt 20001004  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||||||||||||   |||||||||||||||||| ||| ||||||| ||  | |||||||||||    
T  20001003 gtatgaaaatgggttgatgaacaattgtggctaaattcgtgctcttgttgtaatgttattttcttgtgcatgaattg 20000927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 35 - 169
Target Start/End: Original strand, 14499755 - 14499893
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttggttatattttaccgttgttagtaa-ttaccgttga 132  Q
    ||||| ||| |||||||||||||||||||||||||| |||| ||||||||| |||||||| |||||||||||||||| ||||||||||| ||||||||||    
T  14499755 gtgagaaccattattttactaagttactagtgtagtaattaatttttaccgtttagtgactgttggttatattttactgttgttagtaatttaccgttga 14499854  T
Q  133 gtgtatagaaactttt--gaattgtgttagaatgggtta 169  Q
    ||||||||||||||||  ||||| |||||||||||||||    
T  14499855 gtgtatagaaactttttagaattatgttagaatgggtta 14499893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 385 - 518
Target Start/End: Complemental strand, 18248556 - 18248422
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaattttg-cattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgc 483  Q
    |||||||||||||||||||||||||||||| |||  ||||||  |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  18248556 aaggtaagggggttagttattatcataatcttgtacaatttttacattttctcatgttgtatgaaaatgggttgatgaacaattgatgttaaattcgtgc 18248457  T
Q  484 tcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||| ||| ||  | |||||||||||    
T  18248456 tcttgctgtgatgctattttcttgtgcatgaattg 18248422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 385 - 518
Target Start/End: Complemental strand, 19020824 - 19020690
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgc 483  Q
    |||||||||||||||||||  |||||||||||||  |||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  19020824 aaggtaagggggttagttaccatcataatcatgttcaatttttgcattttgtcatgttgtatgaaaatgggttgatgaacaattcttgctaaattcgtgc 19020725  T
Q  484 tcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||| ||| ||  | |||||||||||    
T  19020724 tcttgctgtgatgctattttcttgtgcatgaattg 19020690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 14952505 - 14952392
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| || ||||||||||||||| ||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  14952505 atggtaattttagtgagaattattttaataattagtgggaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgtttgt 14952406  T
Q  101 tatattttaccgtt 114  Q
    || |||||||||||    
T  14952405 tacattttaccgtt 14952392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 380 - 496
Target Start/End: Original strand, 17145570 - 17145687
Alignment:
Q  380 cttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaatt 478  Q
    |||| ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||| |||||||||||||| ||| ||||||    
T  17145570 cttctaaggtaagggggttagttattatcataatcatgttcaatttttgcattttctcatgttgtatgaaaatgagttgatgaacaattgatgttaaatt 17145669  T
Q  479 cgtgctcttgctgtgatg 496  Q
    ||||||||| ||||||||    
T  17145670 cgtgctcttactgtgatg 17145687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 26339747 - 26339634
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| ||||| ||||| ||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  26339747 atggtaattttggtgagaattattttaataattagtgagaacccttattgtactaaattactagtgtagtgattagttttcaccgttagtgaccgttggt 26339648  T
Q  101 tatattttaccgtt 114  Q
    || |||||||||||    
T  26339647 tacattttaccgtt 26339634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 394 - 496
Target Start/End: Complemental strand, 8378480 - 8378377
Alignment:
Q  394 gggttagttattatcataatcatgtgtaattttg-cattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgt 492  Q
    |||||||||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  8378480 gggttagttattatcataatcatgtacaatttttacattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgt 8378381  T
Q  493 gatg 496  Q
    ||||    
T  8378380 gatg 8378377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 343 - 488
Target Start/End: Complemental strand, 26339399 - 26339253
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatca-tgtgtaattttgcattttctcatgtt 441  Q
    |||||||| ||||||||| ||  ||  || |||||  |||| ||||||||||||||||||||||||||||||| | |  |||||| ||| || |||||||    
T  26339399 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcaatttcaaattttacatcttttcatgtt 26339300  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttg 488  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||    
T  26339299 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 26339253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 20001441 - 20001349
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||| |||||||||||||||||| || || ||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20001441 atggtaattttggtgagaattattttaatagttagtgagaacctttattttactaagttactagtgtagtgattagattttaccgttagtgac 20001349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 54047385 - 54047477
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||| |||||||||||||||||| || || ||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  54047385 atggtaattttggtgagaattattttaatagttagtgagaaccattattttactaagttactagggtagtgattagattttaccgttagtgac 54047477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 15271831 - 15271923
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||| |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||  || |||||||| ||||| ||||||||||    
T  15271831 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactaaggtcgtgattagattttaacgttagtgac 15271923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 423 - 518
Target Start/End: Complemental strand, 22738568 - 22738473
Alignment:
Q  423 ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||||||||||||||||||||||||| ||| |||||||| ||| |||||||||| ||||||||||||| ||| ||  | |||||||||||    
T  22738568 ttttgcattttctcatgttgtatgaaaatgggctgaggaacaattgatgttaaattcgtgttcttgctgtgatgctattttcttgtgcatgaattg 22738473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 318 - 416
Target Start/End: Complemental strand, 14952183 - 14952085
Alignment:
Q  318 agctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcat 416  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||  ||  || |||||  |||| |||||||||||||||||  |||||||||||||    
T  14952183 agctttaggaatcaagtgggtgacttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagtctttatcataatcat 14952085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 385 - 459
Target Start/End: Complemental strand, 9795564 - 9795490
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgat 459  Q
    |||||||||||||||||||| |||||||||||||  || |||| ||||||||||||||||||| ||||||||||||    
T  9795564 aaggtaagggggttagttatcatcataatcatgttcaattttttcattttctcatgttgtatg-aaatgggttgat 9795490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 32460317 - 32460384
Alignment:
Q  105 ttttaccgttgttagtaatt-accgttgagtgtatagaaactttt--gaattgtgttagaatgggtta 169  Q
    |||||||||||||||||||| ||||||||||||||||||||||||  || || |||||||||||||||    
T  32460317 ttttaccgttgttagtaatttaccgttgagtgtatagaaactttttagagttatgttagaatgggtta 32460384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 47534563 - 47534647
Alignment:
Q  4 gtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt 87  Q
    ||||| |||||||||||||||||| |  || ||||| ||| ||||||| |||||||||||||||||| |||||| ||||||||||    
T  47534563 gtaattttggtgagaattattttagtgtttagtgagaaccattattttgctaagttactagtgtagtcattagtattttaccgtt 47534647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 32460243 - 32460326
Alignment:
Q  4 gtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt 87  Q
    ||||| |||||||||||||||||     || ||||| ||| |||||||||||||||||||||||||| |||| |||||||||||    
T  32460243 gtaattttggtgagaattatttttagttttagtgagaaccattattttactaagttactagtgtagtaattaatttttaccgtt 32460326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 12244413 - 12244482
Alignment:
Q  50 ttactaagttactagtgtagtgattag--tttttaccgtta-gtgaccgttggttatattttaccgttgt 116  Q
    ||||||||||||||||||||| |||||  |||||||||||| ||||||||| ||  ||||||||||||||    
T  12244413 ttactaagttactagtgtagtaattagtatttttaccgttacgtgaccgttagtagtattttaccgttgt 12244482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 417
Target Start/End: Complemental strand, 14996518 - 14996444
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatg 417  Q
    |||||||||||||||||| ||  ||  || |||||  |||  |||||||||||||||||||||||||||||||||    
T  14996518 taggagctgaattgaagcaagagtttgggttaatcttcttttaaggtaagggggttagttattatcataatcatg 14996444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 18493627 - 18493717
Alignment:
Q  10 ttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgtt 97  Q
    |||||||| |||||||| | || || ||||||||| |||||||||||||||||||| ||||| |||||| || ||||||| ||||||||||    
T  18493627 ttggtgaggattatttttagtatttagtgaggaccgttattttactaagttactagagtagtaattagtattctaccgttaagtgaccgtt 18493717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 15675101 - 15675149
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||| |||||||||||||||||||||    
T  15675101 tgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattg 15675149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 33240951 - 33240903
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||| |||||||||||||||||||||    
T  33240951 tgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattg 33240903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 14952342 - 14952275
Alignment:
Q  161 aatgggttaggcccattagaatttgagttgagcccattagtggagatgacactagggtcgtcttagaa 228  Q
    ||||||||| ||||| |||||  | |||| ||||||||||||||||| |||||||||| || ||||||    
T  14952342 aatgggttaagcccactagaaactaagttaagcccattagtggagataacactagggttgtgttagaa 14952275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 22351756 - 22351823
Alignment:
Q  161 aatgggttaggcccattagaatttgagttgagcccattagtggagatgacactagggtcgtcttagaa 228  Q
    ||||||||| ||||| |||||  | |||| ||||||||||||||||| |||||||||| || ||||||    
T  22351756 aatgggttaagcccactagaaactaagttaagcccattagtggagataacactagggttgtgttagaa 22351823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 228
Target Start/End: Complemental strand, 26339583 - 26339516
Alignment:
Q  161 aatgggttaggcccattagaatttgagttgagcccattagtggagatgacactagggtcgtcttagaa 228  Q
    ||||||||| ||||| |||||  | |||| ||||||||||||||||| |||||||||| || ||||||    
T  26339583 aatgggttaagcccactagaaactaagttaagcccattagtggagataacactagggttgtgttagaa 26339516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 161 - 215
Target Start/End: Original strand, 15135676 - 15135730
Alignment:
Q  161 aatgggttaggcccattagaatttgagttgagcccattagtggagatgacactag 215  Q
    ||||||||| ||||| |||||  | |||||||||||||||||||||| |||||||    
T  15135676 aatgggttaagcccactagaaactaagttgagcccattagtggagataacactag 15135730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 18277171 - 18277057
Alignment:
Q  4 gtaatcttggtgagaattatt-ttattaattggtgaggacccttatttt-actaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttgg 99  Q
    ||||| ||||||||||||||| ||| | ||| ||||| ||| ||||||| |||||||||||| ||| || |||||| |||||||||| ||||||||||      
T  18277171 gtaattttggtgagaattattcttagtgattagtgagaaccattatttttactaagttactattgtggttattagtattttaccgttaagtgaccgttat 18277072  T
Q  100 ttatattttaccgtt 114  Q
    |  ||||||||||||    
T  18277071 tagtattttaccgtt 18277057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 418
Target Start/End: Complemental strand, 8378524 - 8378491
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgt 418  Q
    ||||||||||| ||||||||||||||||||||||    
T  8378524 aaggtaaggggattagttattatcataatcatgt 8378491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 12133151 - 12133196
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagtttt 80  Q
    ||||| ||| ||||||||||||||||||||||| || |||||||||    
T  12133151 gtgagaaccattattttactaagttactagtgtggtaattagtttt 12133196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 37956529 - 37956618
Alignment:
Q  10 ttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgtt 97  Q
    ||||||||||||||||| | |  || ||||| ||| ||||||| |||||||||||| ||| | |||||| ||||||||| ||||||||||    
T  37956529 ttggtgagaattatttttagtgtttagtgagaaccattattttgctaagttactagggtaataattagtatttaccgttaagtgaccgtt 37956618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 122140 - 122092
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||| ||||||   |||||||| |||||||||||||||||||||    
T  122140 tgctaaatttgtgctccaactgtgatgatatgtttgtatgcatgaattg 122092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 819433 - 819577
Alignment:
Q  10 ttggtgagaatta-ttttattaattggtgaggacccttattttactaagttactagtgtagtgatta-gtttttaccg-ttagtgaccgttggttatatt 106  Q
    ||||||||||||| ||||| | ||| ||||| ||| || ||||||||||||||||| ||| | |||| | |||||||| |||||||||  | || |||||    
T  819433 ttggtgagaattacttttagtgattagtgagaaccgttgttttactaagttactagagtaataattatggttttaccgtttagtgaccactagtgatatt 819532  T
Q  107 ttaccgttgttagt-aattaccgttgagtgtatagaaacttttga 150  Q
    |||||||| ||| | |||||||| | || || ||||||| |||||    
T  819533 ttaccgttattaatgaattaccggttagagtgtagaaacatttga 819577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 145 - 181
Target Start/End: Complemental strand, 7850579 - 7850543
Alignment:
Q  145 ttttgaattgtgttagaatgggttaggcccattagaa 181  Q
    |||||||||||| |||||||||||| |||||||||||    
T  7850579 ttttgaattgtgctagaatgggttaagcccattagaa 7850543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 10104262 - 10104310
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||| |||||||   |||||||| |||||||||||||||||||||    
T  10104262 tgctaaatccgtgctccaactgtgatgatatgtttgtatgcatgaattg 10104310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 10488813 - 10488765
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||    
T  10488813 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattg 10488765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 16327938 - 16327986
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||    
T  16327938 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattg 16327986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 26680451 - 26680403
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||    
T  26680451 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattg 26680403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 130
Target Start/End: Complemental strand, 30458608 - 30458524
Alignment:
Q  48 ttttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttggttatattttaccgttgttagt-aattaccgtt 130  Q
    ||||||||||||||||| |||    | || |||||||||| |||||||||| || ||||||||||||| ||||| ||||||||||    
T  30458608 ttttactaagttactagagtaaaattaagattttaccgtttagtgaccgttagtgatattttaccgttattagtgaattaccgtt 30458524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 54118256 - 54118304
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||    ||||||| |||||||||||||||||||||    
T  54118256 tgctaaattcgtgctccaattgtgatgatatgtttgtatgcatgaattg 54118304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 174; Significance: 2e-93; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 1 - 178
Target Start/End: Complemental strand, 178 - 1
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  178 atggtaattttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 79  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccatta 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  78 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccatta 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 172; Significance: 3e-92; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 23133 - 23316
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  23133 atggtaattttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgactgttggt 23232  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaattt 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23233 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagcattt 23316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 171; Significance: 1e-91; HSPs: 9)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 36814 - 36568
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| || || ||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36814 atggtaattttggtgagaattattttaatatttagtgagaaaacttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 36715  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaac-ttttgaattgtgttagaatgggttaggcccattagaatttgagttgagcccatta 199  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  36714 tataatttaccgttgttagtaattaccgttgagtgtatagaaactttttgaattgtgttagaatgggttaggcccattgtaatttgagttgagcccatta 36615  T
Q  200 gtggagatgacactagggtcgtcttagaatagttattcatttcacaa 246  Q
      || ||| |||||||||| ||| |||||| ||||||||||||||||    
T  36614 agggggataacactagggttgtcatagaattgttattcatttcacaa 36568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 308 - 518
Target Start/End: Complemental strand, 36507 - 36297
Alignment:
Q  308 gttgaagggaagctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattat 407  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||| | |||||    
T  36507 gttgaaggaaagctttaggaatcaagtgggtgacctaggagctgaattgaagcaagggttagggataatcaacttcaaaggtaagggggttaatgattat 36408  T
Q  408 cataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgta 507  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  36407 cataatcatgtgtaattttgcatattctcatgttgtatgaaactgggttgatgaacaattcatgctaaattcgtgctcttgtagtgatgttatgtttgta 36308  T
Q  508 tgcatgaattg 518  Q
    || ||||||||    
T  36307 tgtatgaattg 36297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 169436 - 169677
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||| | ||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  169436 atggtaattttggtgagaattatttaaataattagtgagaacccttattttactgagttactagtgtagtgattagtttttaccgttagtgaccgttggt 169535  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt-gaattgtgttagaatgggttaggcccattagaa-tttgagttgagcccatt 198  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||| ||||| |||||||||||||||||||||||| || |||||||||||||||||    
T  169536 tatattttaccgttgttagtaattaccattgagtgtgtagaaacttttagaattatgttagaatgggttaggcccattacaattttgagttgagcccatt 169635  T
Q  199 agtggagatgacactagggtcgtcttagaatagttattcatt 240  Q
    |  || ||| ||||||| || ||| |||||| || |||||||    
T  169636 aagggggataacactagagttgtcatagaattgtcattcatt 169677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 308 - 509
Target Start/End: Original strand, 169748 - 169951
Alignment:
Q  308 gttgaagg-gaagctttaggaatcaagtggg-tgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttatt 405  Q
    |||||||| ||||||| |||||||||||||| |||| || ||||||||||||||| ||| |||  |||||||| ||||||| |||||||||||||| |||    
T  169748 gttgaaggcgaagcttgaggaatcaagtggggtgacataagagctgaattgaagcaagggttagtgataatcatcttcaaaagtaagggggttagtgatt 169847  T
Q  406 atcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttg 505  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  169848 atcataatcatgtataattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttg 169947  T
Q  506 tatg 509  Q
    ||||    
T  169948 tatg 169951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 330 - 547
Alignment:
Q  4 gtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttat 103  Q
    ||||| |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  330 gtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgactgtttgttat 429  T
Q  104 attttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccattag 200  Q
    ||||||| |||||||||||||||||||||||||||||||||||||  ||||| |||||||||| |||| |||||||||||||| || ||||||||||||     
T  430 attttactgttgttagtaattaccgttgagtgtatagaaactttttggaattatgttagaatgagttaagcccattagaatttggaattgagcccattaa 529  T
Q  201 tggagatgacactagggt 218  Q
     |||||| ||| ||||||    
T  530 gggagataacattagggt 547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #6
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 153532 - 153763
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttgg 99  Q
    |||||||| |||||||||| ||||||| || || || || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  153532 atggtaattttggtgagaactattttaatatttagtaagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgttcg 153631  T
Q  100 ttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagccca 196  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||| |||||||||||||||||||| || |||||| ||    
T  153632 ttatattttaccgttgttagtaattaccgttgagtgtatagaaactttttagaattatgttagaataggttaggcccattagaatttggaattgagctca 153731  T
Q  197 ttagtggagatgacactagggtcgtcttagaa 228  Q
    |||  |||||| ||| |||||| ||| |||||    
T  153732 ttaagggagataacattagggttgtcatagaa 153763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 60730 - 60912
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttg 98  Q
    |||||||| ||||||||||||||||| | || || ||||  ||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||    
T  60730 atggtaattttggtgagaattatttttagtatttagtgacaacccttattttactaagttactagtgtagtgattagtttttactgcttggtgaccgttg 60829  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    ||||  ||||||||| |||||||||||||||||||||||| |||||||||  ||||||||||||||||||||| |||||||||    
T  60830 gttaagttttaccgtcgttagtaattaccgttgagtgtattgaaactttttagaattgtgttagaatgggttaagcccattag 60912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #8
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 343 - 518
Target Start/End: Original strand, 153883 - 154059
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||||||||||||||| ||  ||   | |||||  |||| ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  153883 taggagctgaattgaagcaagagtttgagttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgtt 153982  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||| ||  | |||||||||||    
T  153983 gtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattg 154059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 48849 - 48801
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||| |||||||||||||||||||||    
T  48849 tgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattg 48801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 170; Significance: 5e-91; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 170; E-Value: 5e-91
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 31203 - 31432
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  31203 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagagattagtttttaccgttagtaaccgttggt 31302  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt-gaattgtgttagaatgggttaggcccattagaatttgagttgagcccatta 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31303 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttagaattatgttagaatgggttaggcccattagaatttgagttgagcccatta 31402  T
Q  200 gtggagatgacactagggtcgtcttagaat 229  Q
      || ||| |||||||||| ||| ||||||    
T  31403 agggggataacactagggttgtcatagaat 31432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 308 - 518
Target Start/End: Original strand, 31513 - 31723
Alignment:
Q  308 gttgaagggaagctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattat 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||  |||||||||||||||| |||||||||||||| |||||    
T  31513 gttgaagggaagctttaggaatcaagtgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaatgtaagggggttagtgattat 31612  T
Q  408 cataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgta 507  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||| |    
T  31613 cataatcatgtgtaattttgcatattctcatgttgtatgaaaatgagttgatgaacaattcatgctaaattcgtgctcttgtggtgatgttatgtttgaa 31712  T
Q  508 tgcatgaattg 518  Q
    |||||||||||    
T  31713 tgcatgaattg 31723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 128181 - 128229
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||||||||    |||||||| |||||||||||||||||||||    
T  128181 tgctaaattcgtgcttcaactgtgatgatatgtttgtatgcatgaattg 128229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 169; Significance: 2e-90; HSPs: 4)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 43718 - 43490
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||| ||||||||| | ||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  43718 atggtaattttggtgaggattattttaatgattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccattagtgaccgttggt 43619  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaatttgagttgagcccattag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||     
T  43618 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttggaatgggttaggcccattagattttgagttaagcccattaa 43519  T
Q  201 tggagatgacactagggtcgtcttagaat 229  Q
     || ||| |||||||||| ||||||||||    
T  43518 gggggataacactagggttgtcttagaat 43490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 314 - 518
Target Start/End: Complemental strand, 43404 - 43201
Alignment:
Q  314 gggaagctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataat 413  Q
    ||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||     
T  43404 gggaagcttgaggaatcaagtgggtgatctaggagctgaagtgaagctaggattaaggataatcaacttcaaaggtaagggggttagttactatcacaaa 43305  T
Q  414 catgtgtaattttgca-ttttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcat 512  Q
    ||  |||||||||||| |||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||| |||||||||||| |||||||    
T  43304 ca--tgtaattttgcatttttctcatgttgtatgaaaatgggttgatgagcaattcatgtcaaattcgtgctcttgctgggatgttatgtttctatgcat 43207  T
Q  513 gaattg 518  Q
    ||||||    
T  43206 gaattg 43201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #3
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 39836 - 39616
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||| |||||| || ||  |||| ||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||| ||    
T  39836 atggtaattttggtgagaatcattttaatatttaatgagaacccttattttaccaagttactagtgtaatgattagtttttatcgttagtgaccgttcgt 39737  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||| ||||||||||||||||||| || ||||||||||    
T  39736 tatattttaccgttgttagtaattaccgttgagtggatagaaactttttggaattatgttagaatgagttaggcccattagaatttggaattgagcccat 39637  T
Q  198 tagtggagatgacactagggt 218  Q
    ||  |||||| ||| ||||||    
T  39636 taagggagataacattagggt 39616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #4
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 334 - 496
Target Start/End: Complemental strand, 39492 - 39329
Alignment:
Q  334 tgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 432  Q
    ||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  39492 tgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttattatcataatcatgtacaatctttgcattt 39393  T
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    ||||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||    
T  39392 tctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatg 39329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 166; Significance: 1e-88; HSPs: 3)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 29919 - 29690
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29919 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttactgttagtgaccgttggt 29820  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccatta-gaatttgagttgagcccatta 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  | |||||||| |||||||||    
T  29819 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggccctttatcattttgagttaagcccatta 29720  T
Q  200 gtggagatgacactagggtcgtcttagaat 229  Q
      || ||| |||||||||| ||||||||||    
T  29719 agggggataacactagggttgtcttagaat 29690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #2
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 327 - 496
Target Start/End: Complemental strand, 29558 - 29388
Alignment:
Q  327 aatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tt 425  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||    
T  29558 aatcaagtgggtgacctaggagctgaagtgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtacaatctt 29459  T
Q  426 tgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    ||||||||||||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||    
T  29458 tgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgttaaattcgtgctcttgctgtgatg 29388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 314 - 353
Target Start/End: Complemental strand, 29604 - 29565
Alignment:
Q  314 gggaagctttaggaatcaagtgggtgacctaggagctgaa 353  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  29604 gggaagcttgaggaatcaagtgggtgacctaggagctgaa 29565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 165; Significance: 5e-88; HSPs: 2)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 6983 - 7211
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  6983 atggtaattttggtgagaattattttattaattagtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgactgttggt 7082  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt-gaattgtgttagaatgggttaggcccattaga-atttgagttgagcccatt 198  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||    
T  7083 tatattttaccgttgttggtaattaccgttgagtgtatagaaacttttagaattatgttagaatgggttaggcccattagatttttgagttgagcccatt 7182  T
Q  199 agtggagatgacactagggtcgtcttaga 227  Q
    |  |||||| ||| |||||| ||| ||||    
T  7183 aagggagataacattagggttgtcataga 7211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 318 - 518
Target Start/End: Original strand, 7306 - 7508
Alignment:
Q  318 agctttaggaatcaagtggg-tgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcat 416  Q
    ||||| ||||||||| |||| | | ||||||||||||||||||| || |||| || |||||  |||||||||||||||||||||||||||||||||||||    
T  7306 agcttgaggaatcaattggggtaagctaggagctgaattgaagcaagaattagggttaatcttcttcaaaggtaagggggttagttattatcataatcat 7405  T
Q  417 gtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaa 515  Q
    ||   ||||| |||||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||| ||||||| ||| ||  | ||||||||    
T  7406 gttccatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattattactaaattcgtgctcttgttgtgatgctattttcttgtgcatgaa 7505  T
Q  516 ttg 518  Q
    |||    
T  7506 ttg 7508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 160; Significance: 5e-85; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 22238326 - 22238525
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22238326 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattaatttttaccgttagtgaccgttggt 22238425  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattag-aatttgagttgagcccatta 199  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||    
T  22238426 tatattttaccgttgttagtaattaccgttgagtgtatggaaacttttgaattgtgttagaatgggttaggcccattagcattttgagttaagcccatta 22238525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 18059285 - 18059512
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||| |||||| || || ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  18059285 atggtaattttggtgagaatcattttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttt-accgttagtgaccgttcgt 18059383  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaa-tttgagttgagcccatta 199  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  18059384 tatattttaccgttgttagtaattaccgtggagtgtatagaaacttttgaattgtgttaggatgggttaggcccattagaattttgagttgagcccatta 18059483  T
Q  200 gtggagatgacactagggtcgtcttagaa 228  Q
      |||||| ||| |||||| ||| |||||    
T  18059484 agggagataacattagggttgtcatagaa 18059512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 22228538 - 22228308
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| || || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22228538 atggtaattttggtgagaattattttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 22228439  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaat-ttgagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||| ||||||||||||||||||||| | || ||||||||||    
T  22228438 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttttagaattatgttaggatgggttaggcccattagaatctagaattgagcccat 22228339  T
Q  198 tagtggagatgacactagggtcgtcttagaa 228  Q
    ||  |||||| ||| |||||| ||| |||||    
T  22228338 taagggagataacattagggttgtcatagaa 22228308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 17149294 - 17149065
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| | |||||| ||||||||| ||||| ||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||    
T  17149294 atggtaatttgggtgaggattattttaataattagtgagaacccttattttactaagttactagtgtaatgattagtttttcccgttagtgaccgttagt 17149195  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaa-tttgagttgagcccatta 199  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||| |||    
T  17149194 tatattttaccgttgttagtaattaccgtggagtgtatagaaacttttgaattgtgttaggatgggttaggcccattagaattttgagttaagcccgtta 17149095  T
Q  200 gtggagatgacactagggtcgtcttagaat 229  Q
      || ||| |||||||||| ||||||||||    
T  17149094 agggggataacactagggttgtcttagaat 17149065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 38054637 - 38054865
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||| |||||| || ||  |||| ||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||| ||    
T  38054637 atggtaattttggtgagaatcattttaatatttaatgagaacccttattttaccaagttactagtgtaatgattagtttttatcgttagtgaccgttcgt 38054736  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattag-aatttgagttgagcccatta 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||    
T  38054737 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagcattttgagttaagcccatta 38054836  T
Q  200 gtggagatgacactagggtcgtcttagaa 228  Q
      |||||| ||| |||||| ||| |||||    
T  38054837 agggagataacattagggttgtcatagaa 38054865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 32 - 218
Target Start/End: Original strand, 19962055 - 19962242
Alignment:
Q  32 ttggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttatattttaccgttgttagtaattaccgttg 131  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |    
T  19962055 ttggtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttcattatattttaccgttgttagtaattaccgtgg 19962154  T
Q  132 agtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaattt-gagttgagcccattagtggagatgacactagggt 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||  |||||| ||| ||||||    
T  19962155 agtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaatttggaattgagcccattaagggagataacattagggt 19962242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 318 - 518
Target Start/End: Original strand, 5072237 - 5072436
Alignment:
Q  318 agctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatg 417  Q
    |||||||||||||||||||||||| |||||||||||||||||| | ||||| || |||||  |||||||||||||||||||||||||||||| |||||||    
T  5072237 agctttaggaatcaagtgggtgacttaggagctgaattgaagcaaagattagggttaatcttcttcaaaggtaagggggttagttattatcacaatcatg 5072336  T
Q  418 tgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaatt 517  Q
    |  | |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5072337 ta-atttttgcatttactcaagttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttatatgcatgaatt 5072435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 17005371 - 17005151
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||| |||||| || || ||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||    
T  17005371 atggtaattttggtgagaatcattttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttatcgttggtgaccgttcgt 17005272  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||| ||||||||||||||||||| || ||||||||||    
T  17005271 tatattttaccgttgttagtaattaccgttgagtggatagaaactttttggaattatgttagaatgagttaggcccattagaatttggaattgagcccat 17005172  T
Q  198 tagtggagatgacactagggt 218  Q
    ||  |||||| ||| ||||||    
T  17005171 taagggagataacattagggt 17005151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 308 - 518
Target Start/End: Original strand, 18059597 - 18059810
Alignment:
Q  308 gttgaagggaa-gctttaggaatcaagtggg-tgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttatt 405  Q
    ||||||||||| |||| ||||||||| |||| ||||||||||||||||||||||| ||| ||| | ||||||| ||||||||||||||||||||||||||    
T  18059597 gttgaagggaaagcttgaggaatcaattggggtgacctaggagctgaattgaagcaagggttaggaataatcatcttcaaaggtaagggggttagttatt 18059696  T
Q  406 atcataatcatgtgtaat-tttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgttt 504  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||| ||| ||     
T  18059697 atcataatcatgtataatctttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgttaaattcgtgctcttgctgtgatgctattttc 18059796  T
Q  505 gtatgcatgaattg 518  Q
     | |||||||||||    
T  18059797 ttgtgcatgaattg 18059810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 334 - 496
Target Start/End: Complemental strand, 17005027 - 17004864
Alignment:
Q  334 tgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 432  Q
    ||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  17005027 tgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttattatcataatcatgtacaatctttgcattt 17004928  T
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    ||||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||    
T  17004927 tctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatg 17004864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 308 - 518
Target Start/End: Complemental strand, 17148985 - 17148771
Alignment:
Q  308 gttgaagggaa-gctttaggaatcaagtggg-tgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaaggggg-ttagttat 404  Q
    ||||||||||| |||| |||||||||||||| |||| |||||||||||||||||| ||| ||  ||||||||||||||||||||||||||| ||||||||    
T  17148985 gttgaagggaaagcttgaggaatcaagtggggtgacataggagctgaattgaagcaagggttggggataatcaacttcaaaggtaaggggggttagttat 17148886  T
Q  405 tatcataatcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtt 503  Q
    ||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||| ||| ||||||| ||    
T  17148885 tatcataatcatgtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgtggctaaattcgtgctcttgttgtaatgttatttt 17148786  T
Q  504 tgtatgcatgaattg 518  Q
      | |||||||||||    
T  17148785 cttgtgcatgaattg 17148771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 35 - 228
Target Start/End: Original strand, 15860966 - 15861162
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttatattttaccgttgttagtaattaccgttgagt 134  Q
    ||||| ||||||||||||||||| ||  ||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  15860966 gtgagaacccttattttactaagctaacagtgtagtgatcagtttttaccgttagtgatcgttggttatattttaccgttgttagtaattaccgttgagt 15861065  T
Q  135 gtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccattagtggagatgacactagggtcgtcttagaa 228  Q
    ||||| ||||||||  ||||| |||||||||||||||| ||||||||||||| || ||||||||||||  |||||| ||| |||||| ||| |||||    
T  15861066 gtataaaaactttttagaattatgttagaatgggttagacccattagaatttagaattgagcccattaagggagataacattagggttgtcatagaa 15861162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 346 - 518
Target Start/End: Complemental strand, 22228185 - 22228012
Alignment:
Q  346 gagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgttgta 444  Q
    ||||||||||||||| ||  ||| || |||||| |||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||    
T  22228185 gagctgaattgaagcaagagttagggttaatcatcttcaaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgttgta 22228086  T
Q  445 tgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  | |||||||||||    
T  22228085 tgaaaatgggttgatgaacaattcttgctaaattcgtgctcttgctgtgatgttattttcttgtgcatgaattg 22228012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 346 - 518
Target Start/End: Complemental strand, 22232882 - 22232709
Alignment:
Q  346 gagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgttgta 444  Q
    ||||||||||||||| ||  ||| || |||||| |||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||    
T  22232882 gagctgaattgaagcaagagttagggttaatcatcttcaaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgttgta 22232783  T
Q  445 tgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||  | |||||||||||    
T  22232782 tgaaaatgggttgatgaacaattcttgctaaattcgtgctcttgctgtgatgttattttcttgtgcatgaattg 22232709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 20255051 - 20254902
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||||| ||||||||||||||||| | || || ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20255051 atggtaattttggtgagaattatttttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgttg 20254952  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt 148  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  20254951 gttataatttaccgttgttagtaattaccgttgagtgtatagaaactttt 20254902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 334 - 492
Target Start/End: Original strand, 19962366 - 19962525
Alignment:
Q  334 tgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 432  Q
    |||| |||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  19962366 tgggcgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttattatcataatcatgtacaatctttgcattt 19962465  T
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgt 492  Q
    |||||||||||||||||||||||||||| ||||||  || ||||||||||||||||||||    
T  19962466 tctcatgttgtatgaaaatgggttgatggacaattgttgttaaattcgtgctcttgctgt 19962525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 334 - 500
Target Start/End: Original strand, 38054958 - 38055125
Alignment:
Q  334 tgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 432  Q
    ||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||| |    
T  38054958 tgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttattatcataatcatgtacaatctttgcatct 38055057  T
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttat 500  Q
    ||||||||||||||||||||||||| |||||||||  || |||||||||||| || ||||||||||||    
T  38055058 tctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgcttttactgtgatgttat 38055125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 24521997 - 24522101
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24521997 atggtaattttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 24522096  T
Q  101 tatat 105  Q
    |||||    
T  24522097 tatat 24522101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 385 - 518
Target Start/End: Complemental strand, 2116589 - 2116458
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgct 484  Q
    ||||||| ||||||||| ||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  2116589 aaggtaaaggggttagtgattatcataatcatgt--aattttgcattttctcatgttgtataaaaatgggttgatgaacaattcatgctagattcgtgct 2116492  T
Q  485 cttgctgtgatgttatgtttgtatgcatgaattg 518  Q
     || ||||||||||||||||||||||||||||||    
T  2116491 tttactgtgatgttatgtttgtatgcatgaattg 2116458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 385 - 518
Target Start/End: Complemental strand, 45051757 - 45051626
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgct 484  Q
    |||||||||||||||||  ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  45051757 aaggtaagggggttagtctttatcataatcatgtg--attttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctagattcgtgtt 45051660  T
Q  485 cttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||| ||||||||||| ||||||||||||||||||    
T  45051659 cttactgtgatgttacgtttgtatgcatgaattg 45051626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 380 - 518
Target Start/End: Complemental strand, 46523731 - 46523593
Alignment:
Q  380 cttcaaaggtaagggggttagttattatcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattc 479  Q
    |||| ||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  46523731 cttctaaggtaagggggttagttattatcataatcatgttccattttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattc 46523632  T
Q  480 gtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||| ||||||| ||| ||  | |||||||||||    
T  46523631 gtgctcttgttgtgatgctattttcttgtgcatgaattg 46523593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 24568272 - 24568385
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24568272 atggtaattttggtgagaattattttaataattagtgagaactcttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 24568371  T
Q  101 tatattttaccgtt 114  Q
    || |||||||||||    
T  24568372 tacattttaccgtt 24568385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 423 - 518
Target Start/End: Original strand, 18601071 - 18601166
Alignment:
Q  423 ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  18601071 ttttgcatttgctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcatgctcttgctgtgatgttatgtttgtatgcatgaattg 18601166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 42443119 - 42443209
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtg 91  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42443119 atggtaattttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtg 42443209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 7640463 - 7640576
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| || ||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  7640463 atggtaatttttgtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttgat 7640562  T
Q  101 tatattttaccgtt 114  Q
    || |||||||||||    
T  7640563 tacattttaccgtt 7640576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 46524106 - 46523993
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  46524106 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttggtgaccgttgat 46524007  T
Q  101 tatattttaccgtt 114  Q
    || |||||||||||    
T  46524006 tacattttaccgtt 46523993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 343 - 488
Target Start/End: Complemental strand, 22035827 - 22035681
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatca-tgtgtaattttgcattttctcatgtt 441  Q
    |||||||||||||||||| ||  ||  || |||||  |||| ||||||||||||||||||||||||||||||| | |  |||||| ||| ||||||||||    
T  22035827 taggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcaatttcaaattttacatcttctcatgtt 22035728  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttg 488  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||    
T  22035727 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 22035681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 101 - 228
Target Start/End: Complemental strand, 22233135 - 22233005
Alignment:
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaat-ttgagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||| ||||||||||||||||||||| | || ||||||||||    
T  22233135 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttttagaattatgttaggatgggttaggcccattagaatctagaattgagcccat 22233036  T
Q  198 tagtggagatgacactagggtcgtcttagaa 228  Q
    ||  |||||| ||| |||||| ||| |||||    
T  22233035 taagggagataacattagggttgtcatagaa 22233005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 22036164 - 22036072
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||| |||||||||||| ||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22036164 atggtaattttggtgagaattgttttaataattagtgagaacccttattttactaagttactagtgtagtgattagttttcaccgttagtgac 22036072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 343 - 488
Target Start/End: Original strand, 7640810 - 7640956
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatca-tgtgtaattttgcattttctcatgtt 441  Q
    |||||||| ||||||||| ||  ||  || |||||  |||| ||||||||||||||||||||||||||||||| | |  |||||| ||| || |||||||    
T  7640810 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcaatttcaaattttacatcttttcatgtt 7640909  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttg 488  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||    
T  7640910 gtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 7640956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 13583355 - 13583447
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||| |||||||||||||||||| || || ||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  13583355 atggtaattttggtgagaattattttaatagttagtgagaacctttattttactaagttactagtgtagtgattagattttaccgttagtgac 13583447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 114
Target Start/End: Complemental strand, 17023740 - 17023628
Alignment:
Q  4 gtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggtt 101  Q
    ||||| |||||||||||||||||| |  || ||||| ||| |||||||||||||||||||||||||| |||||| |||||||||| ||||||||||| |     
T  17023740 gtaattttggtgagaattattttagtgtttagtgagaaccattattttactaagttactagtgtagtaattagtattttaccgttaagtgaccgttgtta 17023641  T
Q  102 atattttaccgtt 114  Q
     ||||||||||||    
T  17023640 gtattttaccgtt 17023628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 16646643 - 16646562
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatattttaccgtt 114  Q
    ||||| ||| |||||||||||||||||||| ||||| |||||| |||||||||| ||||||||||||| |||||||||||||    
T  16646643 gtgagaaccattattttactaagttactagggtagtaattagtattttaccgttaagtgaccgttggtaatattttaccgtt 16646562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 37233345 - 37233452
Alignment:
Q  10 ttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatatt 106  Q
    ||||||||||||||||| | || || ||||||||| ||||||||||||||||||||||| || |||||| |||||||||| |||||| |||| |  ||||    
T  37233345 ttggtgagaattatttttagtatttagtgaggaccattattttactaagttactagtgtggttattagtattttaccgttaagtgactgttgttggtatt 37233444  T
Q  107 ttaccgtt 114  Q
    ||||||||    
T  37233445 ttaccgtt 37233452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 416
Target Start/End: Original strand, 15861284 - 15861358
Alignment:
Q  342 ctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcat 416  Q
    ||||||||||||||||||| ||  ||| || |||||| ||||||||||||||||||||||  |||||||||||||    
T  15861284 ctaggagctgaattgaagcaagagttagggttaatcatcttcaaaggtaagggggttagtctttatcataatcat 15861358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29139641 - 29139585
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaag 57  Q
    |||||||| |||||||||||||||||| ||||| ||||| |||||||||||||||||    
T  29139641 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaag 29139585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 21654603 - 21654670
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgt 67  Q
    |||||||| ||||||||||||||||| | || || ||||| |||||||||||||||||||||||||||    
T  21654603 atggtaattttggtgagaattatttttaatatttagtgagaacccttattttactaagttactagtgt 21654670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 116
Target Start/End: Complemental strand, 20177914 - 20177799
Alignment:
Q  4 gtaatcttggtgagaattattttattaattg-gtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggt 100  Q
    |||||||||||||||||||||||   | ||  ||||  ||| |||||||||||||||||||||||||| |||||| |||||||||| ||||| | ||  |    
T  20177914 gtaatcttggtgagaattatttttagagtttagtgaaaaccattattttactaagttactagtgtagtaattagtattttaccgttaagtgatcattaat 20177815  T
Q  101 tatattttaccgttgt 116  Q
     |||||||||||||||    
T  20177814 aatattttaccgttgt 20177799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 27675502 - 27675419
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatattttaccgttgt 116  Q
    ||||| ||| |||||||||||||||||||||||||| |||||| |||||||||| ||||| ||||  |  ||||||||||||||    
T  27675502 gtgagaaccattattttactaagttactagtgtagtaattagtattttaccgttaagtgatcgttaatagtattttaccgttgt 27675419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 51627183 - 51627273
Alignment:
Q  10 ttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgtt 97  Q
    ||||||||||||||||| | |  || ||||| ||| |||||||||||||||||||| ||||| |||||| |||||||||| ||||||||||    
T  51627183 ttggtgagaattatttttagtgtttagtgagaaccattattttactaagttactagagtagtaattagtattttaccgttaagtgaccgtt 51627273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 48 - 114
Target Start/End: Complemental strand, 17609620 - 17609552
Alignment:
Q  48 ttttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatattttaccgtt 114  Q
    |||||||||||||||||||| || |||||| |||||||||| ||||||||||| |  ||||||||||||    
T  17609620 ttttactaagttactagtgtggtaattagtattttaccgttaagtgaccgttgttagtattttaccgtt 17609552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 20913281 - 20913233
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||| |||||||||||||||||||||    
T  20913281 tgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattg 20913233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 20931596 - 20931548
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||| |||||||||||||||||||||    
T  20931596 tgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattg 20931548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 18595525 - 18595592
Alignment:
Q  161 aatgggttaggcccattagaatttgagttgagcccattagtggagatgacactagggtcgtcttagaa 228  Q
    ||||||||| ||||| ||||| || |||| ||||||||||| ||||| |||||||||| || ||||||    
T  18595525 aatgggttaagcccactagaaattaagttaagcccattagtagagataacactagggtagtgttagaa 18595592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 19603829 - 19603774
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttg 98  Q
    |||||||||||||||||||||||||| |||| | |||||||||| |||||||||||    
T  19603829 ttattttactaagttactagtgtagtaattaatattttaccgttaagtgaccgttg 19603774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 16657370 - 16657292
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatattttacc 111  Q
    ||||| ||| |||||||||||||||||||| ||||| |||| |  ||||||||| |||||||||||||  |||||||||    
T  16657370 gtgagaaccgttattttactaagttactagagtagtaattaatagtttaccgttaagtgaccgttggtagtattttacc 16657292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 27329256 - 27329358
Alignment:
Q  10 ttggtgagaatta-ttttattaattggtgaggacccttattttactaagttactagtgtagtgatta-gtttttaccgttagtgaccgttggttatattt 107  Q
    ||||||||||||| ||||| | ||| ||||| ||  || ||||||||| ||||||| ||| | |||| | ||||||||||||||||||||||| | ||||    
T  27329256 ttggtgagaattacttttagtgattagtgagaactgttgttttactaaattactagagtaataattaaggttttaccgttagtgaccgttggtgacattt 27329355  T
Q  108 tac 110  Q
    |||    
T  27329356 tac 27329358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 41219378 - 41219420
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagt 77  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||    
T  41219378 gtgagaaccattattttactaagttactagtgtagtaattagt 41219420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 75960 - 76005
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagtttt 80  Q
    ||||| ||| ||||||||||||||||||||||| || |||||||||    
T  75960 gtgagaaccattattttactaagttactagtgtggtaattagtttt 76005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 230
Target Start/End: Complemental strand, 45051971 - 45051902
Alignment:
Q  161 aatgggttaggcccattagaatttgagttgagcccattagtggagatgacactagggtcgtcttagaata 230  Q
    ||||||||| ||||| |||||  | |||| ||||||||||| ||||| |||||||||| || ||||||||    
T  45051971 aatgggttaagcccactagaaactaagttaagcccattagtagagataacactagggtagtgttagaata 45051902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 150
Target Start/End: Complemental strand, 49968315 - 49968250
Alignment:
Q  86 ttagtgaccgttggttatattttaccgttgttagt-aattaccgttgagtgtatagaaacttttga 150  Q
    ||||||||||||||| ||||||||||||| ||||| |||||||| | || || ||||||| |||||    
T  49968315 ttagtgaccgttggtgatattttaccgttattagtgaattaccggttagagtgtagaaacatttga 49968250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 20445930 - 20445882
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||    ||||||| |||||||||||||||||||||    
T  20445930 tgctaaattcgtgctccaattgtgatgatatgtttgtatgcatgaattg 20445882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 20893638 - 20893686
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||| |||||   |||||||| |||||||||||||||||||||    
T  20893638 tgctaaattcttgctccaactgtgatgatatgtttgtatgcatgaattg 20893686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 158; Significance: 8e-84; HSPs: 2)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 314 - 518
Target Start/End: Original strand, 13171 - 13373
Alignment:
Q  314 gggaagctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataat 413  Q
    ||||||||| |||||||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||    
T  13171 gggaagcttgaggaatcaagtgggtgacctaggaactgaagtgaagctagggttaaggataatcaacttcaaaggtaagggggttagtgattatcataat 13270  T
Q  414 catgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatg 513  Q
    ||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  13271 ca--tgtaatttttcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctagattcgtgctcttagtgtgatgttatgtttgtatgcatg 13368  T
Q  514 aattg 518  Q
    |||||    
T  13369 aattg 13373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 7709 - 7806
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttg 98  Q
    |||||||| |||||||||||||||||| || || ||||| |||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  7709 atggtaattttggtgagaattattttaatagttagtgagaacccttgttttactaagttaccagtgtagtgattagtttttatcgttagtgaccgttg 7806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 157; Significance: 3e-83; HSPs: 2)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 8725 - 8497
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||| |||||| || || ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||    
T  8725 atggtaattttggtgagaatcattttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttacagttagtgaccgttcgt 8626  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaattt-gagttgagcccatta 199  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  8625 tatattttaccgttgttagtaattaccgtggagtgtatagaaacttttgaattgtgttaggatgggttaggcccattagaatttcgagttgagcccatta 8526  T
Q  200 gtggagatgacactagggtcgtcttagaa 228  Q
      |||||| ||| |||||| ||| |||||    
T  8525 agggagataacattagggttgtcatagaa 8497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 385 - 518
Target Start/End: Original strand, 10257 - 10391
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgc 483  Q
    |||||||||||||| ||  |  ||||||||||||  |||||| |||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  10257 aaggtaagggggtttgtcttcttcataatcatgttcaatttttgcattttctcatgttgtatgaaaatgggttgatgaataattgttgctaaattcgtgc 10356  T
Q  484 tcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||| ||| ||  | |||||||||||    
T  10357 tcttgctgtgatgatattttcttgtgcatgaattg 10391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 155; Significance: 5e-82; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 15467883 - 15468100
Alignment:
Q  4 gtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttat 103  Q
    ||||| || ||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15467883 gtaattttagtgagaattattttaatatttggtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttcgttat 15467982  T
Q  104 attttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccattag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||| || |||||||||||||    
T  15467983 attttaccgttgttagtaattaccgttgagtgtatagaaactttttagaattatgttagaatgggttaggcccattagaatttggaattgagcccattag 15468082  T
Q  201 tggagatgacactagggt 218  Q
     |||||| ||| ||||||    
T  15468083 gggagataacattagggt 15468100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 16821866 - 16821646
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||| ||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16821866 atggtaattttggtgtgaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattaatttttaccgttagtgaccgttggt 16821767  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaa-tttgagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||| ||||| |||||||||| ||||||||||||||||    
T  16821766 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttttagaattatgttagaatgagttagacccattagaattttgagttgagcccat 16821667  T
Q  198 tagtggagatgacactagggt 218  Q
    ||  || ||| ||||||||||    
T  16821666 taagggggataacactagggt 16821646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 318 - 518
Target Start/End: Complemental strand, 41270478 - 41270279
Alignment:
Q  318 agctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatg 417  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||| || |||||  |||||||||||||||||||||||||||||| |||||||    
T  41270478 agctttaggaatcaagtgggtgacttaggagctgaattgaagcaaggattagggttaatcttcttcaaaggtaagggggttagttattatcacaatcatg 41270379  T
Q  418 tgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaatt 517  Q
    |  | |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41270378 ta-atttttgcatctactcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaatt 41270280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 318 - 518
Target Start/End: Complemental strand, 55316622 - 55316423
Alignment:
Q  318 agctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatg 417  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||| || |||||  |||||||||||| ||||||||||||||||| |||||||    
T  55316622 agctttaggaatcaagtgggtgacttaggagctgaattgaagcaaggattagggttaatcttcttcaaaggtaaaggggttagttattatcacaatcatg 55316523  T
Q  418 tgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaatt 517  Q
    |  | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55316522 ta-atttttgcatttgctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaatt 55316424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 1 - 258
Target Start/End: Complemental strand, 27840947 - 27840690
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||| |||||||||||||||||| ||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||| |||    
T  27840947 atggtaat-ttggtaagaattattttattaattagtgagaacccttattttactaagttaccagtgtagtaattagtttttaccgttagtaaccgtgggt 27840849  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaa-tttgagttgagcccatta 199  Q
    |||||||||||||||||||| |||||||  |  || |||||||||||||||||||||||| ||||||||||||||||| || |||||||| |||||||||    
T  27840848 tatattttaccgttgttagttattaccgcggtttgaatagaaacttttgaattgtgttaggatgggttaggcccattaaaattttgagttaagcccatta 27840749  T
Q  200 gtggagatgacactagggtcgtcttagaatagttattcatttcacaagacaattttcat 258  Q
      || ||| ||| |||||| ||||||||||  ||||||||||||||| |||||||||||    
T  27840748 agggggataacaatagggttgtcttagaatgtttattcatttcacaaaacaattttcat 27840690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 49233169 - 49232949
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||| |||||| || || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  49233169 atggtaattttggtgagaatcattttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttcgt 49233070  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||  ||||| |||||||||| |||| || ||||||||||| || ||||||||||    
T  49233069 tatattttaccgttgttagtaattatcgttgagtgtatagaaactttttggaattatgttagaatgagttaagctcattagaatttggaattgagcccat 49232970  T
Q  198 tagtggagatgacactagggt 218  Q
    ||  |||||| ||| ||||||    
T  49232969 taagggagataacattagggt 49232949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 4 - 228
Target Start/End: Complemental strand, 25059466 - 25059239
Alignment:
Q  4 gtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttat 103  Q
    ||||| || ||||||||||||||| || || ||||| |||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||| |||||    
T  25059466 gtaattttagtgagaattattttaatatttagtgagaacccttattttactaagttaatagtgtagtgattagtttttactgtttgtgaccgttcgttat 25059367  T
Q  104 attttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccattag 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||| |||||||||||||| || ||||||||||||     
T  25059366 attttaccgttgttagtaattaccgttgagtgtatagaaactttttagaattatgttagaatgggttacgcccattagaatttggaattgagcccattaa 25059267  T
Q  201 tggagatgacactagggtcgtcttagaa 228  Q
     |||||| ||| |||||| ||| |||||    
T  25059266 gggagataacattagggttgtcatagaa 25059239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 18911722 - 18911492
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||| |||||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  18911722 atggtaattttggtaagaattattttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttaatgactgttggt 18911623  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||  || || |||||||||||||||||||||||||||||| || ||||||||||    
T  18911622 tatattttaccgttgttagtaattaccgttgaatgtacagaaactttttagagttatgttagaatgggttaggcccattagaatttagaattgagcccat 18911523  T
Q  198 tagtggagatgacactagggtcgtcttagaa 228  Q
    ||  ||||||  || |||||| ||| |||||    
T  18911522 taagggagatagcattagggttgtcatagaa 18911492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 15936162 - 15936344
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttgg 99  Q
    |||||||| |||||||||||||||||| || || ||||| |||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||    
T  15936162 atggtaattttggtgagaattattttaatatttagtgagaacccttattttactaagttactagtacagtgattagtttttaccgtttagtgaccgttgg 15936261  T
Q  100 ttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattaga 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||| ||||||||||    
T  15936262 ttatattttaccgttgttagtaattaccgttgagtgtatagaaactttttagaattatgttagaatgggttaagcccattaga 15936344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 14842096 - 14842277
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttgg 99  Q
    |||||||| ||||||| |||||||||| || || | ||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  14842096 atggtaattttggtgacaattattttaatatttagcgagaacccttattttactaagttactagtgtagtgattaatttttaccgtttagtgaccgttgg 14842195  T
Q  100 ttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||| |||||||||    
T  14842196 ttatattttaccgttgttagtaattaccgttgagtgtatagaaactttttagaattatgttagaatgggttaagcccattag 14842277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 334 - 518
Target Start/End: Complemental strand, 49232825 - 49232640
Alignment:
Q  334 tgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 432  Q
    ||||||||||| ||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  49232825 tgggtgacctatgagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttattatcataatcatgtacaatctttgcattt 49232726  T
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||| ||  | |||||||||||    
T  49232725 tctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattg 49232640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 13 - 179
Target Start/End: Original strand, 9302664 - 9302834
Alignment:
Q  13 gtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttggttatattttac 110  Q
    |||||||||||||| | || || ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  9302664 gtgagaattatttttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgttggttataatttac 9302763  T
Q  111 cgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||    
T  9302764 cgttgttagtaattaccgttgagtgtatagaaactttttagaattgtgttagaatgggttaagcccattag 9302834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 1467265 - 1467482
Alignment:
Q  4 gtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttat 103  Q
    ||||| ||||||||||| |||||| || ||  |||| ||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||| |||||    
T  1467265 gtaattttggtgagaatcattttaatatttaatgagaacccttattttaccaagttactagtgtaatgattagtttttatcgttagtgaccgttcgttat 1467364  T
Q  104 attttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccattag 200  Q
    |||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||||| ||| ||||||||||||||||||| || ||||||||||||     
T  1467365 attttaccgttgttagtaattaccgttgagtggatagaaactttttggaattatgttaggatgagttaggcccattagaatttggaattgagcccattaa 1467464  T
Q  201 tggagatgacactagggt 218  Q
     |||||| ||| ||||||    
T  1467465 gggagataacattagggt 1467482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 334 - 496
Target Start/End: Original strand, 1467606 - 1467769
Alignment:
Q  334 tgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 432  Q
    ||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  1467606 tgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttattatcataatcatgtacaatctttgcattt 1467705  T
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    ||||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||    
T  1467706 tctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatg 1467769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 308 - 518
Target Start/End: Original strand, 12264630 - 12264844
Alignment:
Q  308 gttgaagggaa-gctttaggaatcaagt--gggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttat 404  Q
    ||||||||||| |||| ||||||||| |  |||||||||||||||||||||||||| | | ||  |  |||||| |||||||||||||||||||||||||    
T  12264630 gttgaagggaaagcttgaggaatcaatttggggtgacctaggagctgaattgaagcaaaggttgggattaatcatcttcaaaggtaagggggttagttat 12264729  T
Q  405 tatcataatcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtt 503  Q
    ||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||| ||    
T  12264730 tatcataatcatgtacaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctatttt 12264829  T
Q  504 tgtatgcatgaattg 518  Q
      | |||||||||||    
T  12264830 cttgtgcatgaattg 12264844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 12901621 - 12901803
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||||| ||||||||||||||||| | ||  | ||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  12901621 atggtaattttggtgagaattatttttaatatattgtgagaacccttattttactaagttactagtgtcgtgattagtttttaccgtttagtgaccgttg 12901720  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    |||||||||||| |||||||||||||| |||||||||| |||||||||||  ||||||||||||||||||||| |||||||||    
T  12901721 gttatattttactgttgttagtaattatcgttgagtgtttagaaactttttagaattgtgttagaatgggttaagcccattag 12901803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 318 - 496
Target Start/End: Complemental strand, 22275615 - 22275435
Alignment:
Q  318 agctttaggaatcaagtggg-tgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcat 416  Q
    ||||| ||||||||| |||| | | ||||||||||||||||||| |   |||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  22275615 agcttgaggaatcaattggggtaagctaggagctgaattgaagcaaaagttaaggttaatcatcttcaaaggtaagggggttagttattatcataatcat 22275516  T
Q  417 gtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    ||  || |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  22275515 gtacaaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatg 22275435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 15938004 - 15938185
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttgg 99  Q
    |||||||| |||||||||||||||||| || || ||||| |||||| ||||||||||||||||    |||||||||||||||| ||| ||||||||||||    
T  15938004 atggtaattttggtgagaattattttaatatttagtgagaacccttcttttactaagttactaagacagtgattagtttttactgtttagtgaccgttgg 15938103  T
Q  100 ttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||| |||||||||    
T  15938104 tgatattttaccgttgttagtaattaccgttgagtgtatagaaactttttggaattatgttagaatgggttaagcccattag 15938185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 11476706 - 11476888
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||||| ||||||||||||||||| | |  || ||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  11476706 atggtaattttggtgagaattatttttaatgtttagtgagaaccattattttactaagttactagtgtagtgattaatttttaccgtttagtgaccgttg 11476805  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||| |||| | |||||||    
T  11476806 gttatattttaccgttgttagtaattaccgttgagtgtatataaactttttagaattatgttagaatgagttaagtccattag 11476888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 334 - 492
Target Start/End: Complemental strand, 12812230 - 12812071
Alignment:
Q  334 tgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 432  Q
    ||||||||||||||||||||||||||| ||| |||  |||||||||||| |||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  12812230 tgggtgacctaggagctgaattgaagcaagggttagagataatcaactttaaaggtaagggggttagttattatcataatcatgtacaatctttgcattt 12812131  T
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgt 492  Q
    |||||| ||||||||||||||||||||| ||||||  || ||||||||||||||||||||    
T  12812130 tctcatattgtatgaaaatgggttgatggacaattgttgttaaattcgtgctcttgctgt 12812071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 342 - 518
Target Start/End: Complemental strand, 16821517 - 16821343
Alignment:
Q  342 ctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaattttgcattttctcatgtt 441  Q
    ||||||||||||||||||| ||  ||   | |||||  |||||||||||||||||||||||||||||| ||||||||  |||||||||||| ||||||||    
T  16821517 ctaggagctgaattgaagcaagagtttgtgttaatcttcttcaaaggtaagggggttagttattatcacaatcatgt--aattttgcatttgctcatgtt 16821420  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||||||||||||||||||| |||  |||| |||||||||||||||||||||||||||||||||| |||||    
T  16821419 gtatgaaaatgggttgatgaacaatttatgtcaaatccgtgctcttgctgtgatgttatgtttgtatgcataaattg 16821343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 343 - 518
Target Start/End: Original strand, 15468216 - 15468392
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaa-ttttgcattttctcatgtt 441  Q
    |||||||||||||||||| || |||| || |||||  |||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||    
T  15468216 taggagctgaattgaagcaagaattagggttaatcttcttcaaaggtaagggggttagttattatcataatcatgtacaaattttgcattttctcatgtt 15468315  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||| ||||||||  ||||||||||||||||||||| ||||| ||| ||  | |||||||||||    
T  15468316 gtatgaaaatgggttgaggaacaattgttgctaaattcgtgctcttgctatgatgctattttcttgtgcatgaattg 15468392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 343 - 518
Target Start/End: Complemental strand, 25059119 - 25058943
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||||||||||||||| |  |||| || |||||  ||||||||||||||||||||||||||||||||||||||   |||||| |||||||||||||||    
T  25059119 taggagctgaattgaagcaaaaattagggttaatcttcttcaaaggtaagggggttagttattatcataatcatgcacaatttttgcattttctcatgtt 25059020  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||| ||  | |||||||||||    
T  25059019 gtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattg 25058943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 14285710 - 14285534
Alignment:
Q  4 gtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttggtt 101  Q
    ||||| ||||||||||||||||| | |  || ||||| ||| ||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||    
T  14285710 gtaattttggtgagaattatttttagtgtttagtgagaaccattattttactaagttaccagtgtagtaattagtttttaccgtttagtgaccgttggtt 14285611  T
Q  102 atattttaccgttgttagtaa-ttaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggccca 175  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||  ||||| ||||||||||||||| |||||    
T  14285610 atattttaccgttgttagtaatttaccgttgagtgtatagaaactttttagaattatgttagaatgggttaagccca 14285534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 22275928 - 22275707
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttgg 99  Q
    |||||||| |||||| |||||||||| | |  || | ||| |||||||||||||||||||||||||||||||||||||||||||||||          ||    
T  22275928 atggtaattttggtgtgaattatttttaatgtttagcgagaacccttattttactaagttactagtgtagtgattagtttttaccgtt----------gg 22275839  T
Q  100 ttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagccca 196  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||  ||||| |||||||||||||||||||||||||||||| || |||||||||    
T  22275838 ttatattttaccgttgttagtaattaccattgagtatatagaaactttttagaattatgttagaatgggttaggcccattagaatttagaattgagccca 22275739  T
Q  197 ttagtggagatgacactagggtcgtcttagaa 228  Q
    |||  |||||| ||| |||||| ||| |||||    
T  22275738 ttaagggagataacattagggttgtcatagaa 22275707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 12257337 - 12257447
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12257337 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 12257436  T
Q  101 tatattttacc 111  Q
    |||||||||||    
T  12257437 tatattttacc 12257447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 385 - 518
Target Start/End: Complemental strand, 15615168 - 15615037
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgct 484  Q
    |||||||||||||||||  |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  15615168 aaggtaagggggttagtctttatcataatcatgt--aattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctagatttgtgct 15615071  T
Q  485 cttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||| ||||| |||||| |||||||||||||||||    
T  15615070 cttactgtggtgttatatttgtatgcatgaattg 15615037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 44229718 - 44229566
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagttttt---accgtt-agtgaccg 95  Q
    |||||||| ||||||||||||||||| | || || ||||| ||||||||||||||||||||||||||||||||||| |||||   |||||| ||||||||    
T  44229718 atggtaattttggtgagaattatttttaatatttagtgagaacccttattttactaagttactagtgtagtgattaattttttttaccgtttagtgaccg 44229619  T
Q  96 ttggttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt 148  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  44229618 ttggttataatttaccgttgttagtaattaccgttgagtgtatagaaactttt 44229566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 16933478 - 16933626
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||||| ||||||||||||||||| | || |  ||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  16933478 atggtaattttggtgagaattatttttaatattaagtgagaacccttattttactaagttactagtgtggtgattagtttttaccgtttagtgaccgttg 16933577  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaacttt 147  Q
    |||||| |||||||||||||||| ||| |||||||||||||||||||||    
T  16933578 gttataatttaccgttgttagtatttatcgttgagtgtatagaaacttt 16933626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 343 - 518
Target Start/End: Complemental strand, 18911373 - 18911197
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||||||||||||||| ||  ||  || |||||  |||| ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  18911373 taggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgtt 18911274  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||| ||| ||  | |||||||||||    
T  18911273 gtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgttgtgatgctattttcttgtgcatgaattg 18911197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 104 - 227
Target Start/End: Complemental strand, 30153587 - 30153463
Alignment:
Q  104 attttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgtgttagaatgggttaggcccattagaa-tttgagttgagcccattagtg 202  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |    
T  30153587 attttaccgttgttagtaattaccgtggagtgtatagaaacttttgaattgtgttaggatgggttaggcccattagaattttgagttgagcccattagag 30153488  T
Q  203 gagatgacactagggtcgtcttaga 227  Q
    ||||| |||||||||| ||| ||||    
T  30153487 gagataacactagggttgtcctaga 30153463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 8275360 - 8275473
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  8275360 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttgat 8275459  T
Q  101 tatattttaccgtt 114  Q
    || |||||||||||    
T  8275460 tacattttaccgtt 8275473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 343 - 518
Target Start/End: Original strand, 18896920 - 18897096
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaa-ttttgcattttctcatgtt 441  Q
    |||||||||||||||||| ||  ||  || |||||  |||| ||||||||||||||||||||||||||||||||||  || ||||| |||||||||||||    
T  18896920 taggagctgaattgaagcaagagtttgggttaatcttcttccaaggtaagggggttagttattatcataatcatgtacaagttttgtattttctcatgtt 18897019  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||||||||||||  || |||||||||||||||||||||||| ||| ||  | |||||||||||    
T  18897020 gtatgaaaatgggttgatgaacaattgttgataaattcgtgctcttgctgtgatgctattttcttgtgcatgaattg 18897096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 8268263 - 8268373
Alignment:
Q  4 gtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttat 103  Q
    ||||| |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  8268263 gtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttgattac 8268362  T
Q  104 attttaccgtt 114  Q
    |||||||||||    
T  8268363 attttaccgtt 8268373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 385 - 518
Target Start/End: Original strand, 12902008 - 12902142
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgc 483  Q
    |||||||||||||||||||| |||||||||||||  |||||| |||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  12902008 aaggtaagggggttagttatcatcataatcatgttcaatttttgcattttctcatgttgtatgaaaatgggttgatgaataatttttgctaaattcgtgc 12902107  T
Q  484 tcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||| ||  | |||||||||||    
T  12902108 tcttgctgtgatgttattttcttgtgcatgaattg 12902142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 343 - 500
Target Start/End: Complemental strand, 5228692 - 5228535
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||||||||||||| | ||  ||  || |||||  |||| |||||||||||||||||||| |||||||||||||  |||||| ||||||||||||||     
T  5228692 taggagctgaattgaaacaagagtttgggttaatcttcttctaaggtaagggggttagttatcatcataatcatgttcaatttttgcattttctcatgtg 5228593  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttat 500  Q
     ||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||    
T  5228592 ttatgaaaatgggttgatgaac-attgttgctaaattcgtgctcttgctgtgatgttat 5228535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 385 - 518
Target Start/End: Original strand, 15936553 - 15936687
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgc 483  Q
    |||||| ||||||||||||| || ||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  15936553 aaggtatgggggttagttatcattataatcatgttcaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttactaaattcgtgc 15936652  T
Q  484 tcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||   |||| ||| |||||||||||||||||||||    
T  15936653 tccaactgtaatgatatgtttgtatgcatgaattg 15936687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 23493109 - 23492988
Alignment:
Q  1 atggtaatcttggtgagaattat-tttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttg 98  Q
    |||| ||| ||||| |||||||| |||| || || ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  23493109 atggaaattttggtaagaattatctttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgttg 23493010  T
Q  99 gttatattttaccgttgttagt 120  Q
    |||||||||||||||| |||||    
T  23493009 gttatattttaccgttattagt 23492988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 13954456 - 13954540
Alignment:
Q  30 aattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttatattttaccgtt 114  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13954456 aattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttacattttaccgtt 13954540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 45861502 - 45861418
Alignment:
Q  30 aattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttatattttaccgtt 114  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  45861502 aattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttacattttaccgtt 45861418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 17062283 - 17062196
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtta 88  Q
    |||||||| |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17062283 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtta 17062196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 112 - 227
Target Start/End: Original strand, 12264428 - 12264545
Alignment:
Q  112 gttgttagtaattaccgttgagtgtatagaaactttt-gaattgtgttagaatgggttaggcccattagaa-tttgagttgagcccattagtggagatga 209  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||| ||||||||||||||||||  |||||| |    
T  12264428 gttgttagtaattaccgttgagtgtatagaaacttttagaattatgttagaatgggttagacccattagaattttgagttgagcccattaagggagataa 12264527  T
Q  210 cactagggtcgtcttaga 227  Q
    || |||||| ||| ||||    
T  12264528 cattagggttgtcataga 12264545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 385 - 518
Target Start/End: Original strand, 15938395 - 15938529
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgc 483  Q
    |||||||||||||||||||| || ||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||  | |||||| |||||    
T  15938395 aaggtaagggggttagttatcattataatcatgttcaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttactaaatacgtgc 15938494  T
Q  484 tcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||   |||| ||| ||||||||||  |||||||||    
T  15938495 tccaactgtaatgatatgtttgtaatcatgaattg 15938529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 385 - 518
Target Start/End: Complemental strand, 54651795 - 54651661
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgc 483  Q
    |||||||||||||| ||  | |||||||||||||  |||||| ||| |||||||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  54651795 aaggtaagggggtttgtcttcatcataatcatgttcaatttttgcaatttctcatgttgtatgaaaatgggttgatgaataattgttgctaaattcgtgc 54651696  T
Q  484 tcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||| ||| ||  | |||||||||||    
T  54651695 tcttgctgtgatgctattttcttgtgcatgaattg 54651661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 53771777 - 53771685
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||| |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||  ||||||||||| ||||||||||||||||    
T  53771777 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactaaggtagtgattagattttaccgttagtgac 53771685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 385 - 518
Target Start/End: Complemental strand, 44229323 - 44229189
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaattttgcattttctcatg-ttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgc 483  Q
    |||||||||||||| ||| | ||||||||||  |  ||||||    ||||||||| |||||||||||||||||||||||||||| ||| ||||| |||||    
T  44229323 aaggtaagggggtttgttttcatcataatcaattcaaattttttcatttctcatggttgtatgaaaatgggttgatgaacaattgatgttaaatccgtgc 44229224  T
Q  484 tcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||| ||||||| ||| ||  | |||||||||||    
T  44229223 tcttgttgtgatgctattttcttgtgcatgaattg 44229189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 343 - 518
Target Start/End: Original strand, 14842446 - 14842621
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaattttgcattttctc--atgt 440  Q
    |||||||||||||||||| ||  ||| || |||||  |||| |||||||||||||||||  ||||||||||||| | | | ||||||  |||||  ||||    
T  14842446 taggagctgaattgaagcaagagttagggttaatcttcttctaaggtaagggggttagtctttatcataatcatct-tcactttgcaaattctcaaatgt 14842544  T
Q  441 tgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||| || || | | ||| | ||||  ||||||||||||||||   |||||||| |||||||||||||||||||||    
T  14842545 tgtatg-aattgtgattatggataattgttgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattg 14842621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 16880847 - 16880763
Alignment:
Q  32 ttggtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatattttaccgtt 114  Q
    |||||||| ||| |||||||||||||||||||| ||||| || ||| |||||||||| |||||||||||||  ||||||||||||    
T  16880847 ttggtgagaaccgttattttactaagttactagagtagtaatcagtattttaccgttaagtgaccgttggtagtattttaccgtt 16880763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 11060498 - 11060605
Alignment:
Q  10 ttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccg-ttagtgaccgttggttatatt 106  Q
    ||||||||||||||||| | |  || ||||| ||| |||||||||||||||||||| ||||| |||| | |||||||| ||||||||||||||| | |||    
T  11060498 ttggtgagaattatttttagtgtttagtgagaaccgttattttactaagttactagagtagtaattaatattttaccgtttagtgaccgttggtaaaatt 11060597  T
Q  107 ttaccgtt 114  Q
    ||||||||    
T  11060598 ttaccgtt 11060605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 11881736 - 11881815
Alignment:
Q  37 gaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatattttaccgtt 114  Q
    ||||||| ||||||| |||||||||||||||||| |||||| |||||||||| ||||||||||| |  ||||||||||||    
T  11881736 gaggaccattattttgctaagttactagtgtagtaattagtattttaccgttaagtgaccgttgttagtattttaccgtt 11881815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 3575951 - 3576060
Alignment:
Q  10 ttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatatt 106  Q
    ||||||||||||||||| | |  || ||||| ||| ||||||||||||||||||||||| || |||||| |||||| ||| ||||||||||| |  ||||    
T  3575951 ttggtgagaattatttttagtgtttagtgagaaccattattttactaagttactagtgttgtaattagtattttacggttaagtgaccgttgttagtatt 3576050  T
Q  107 ttaccgttgt 116  Q
    ||||||||||    
T  3576051 ttaccgttgt 3576060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 19306512 - 19306431
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatattttaccgtt 114  Q
    ||||| ||| |||||||||||||||||||||||||| |||||| |||||||||| ||||||||||  |  ||||||||||||    
T  19306512 gtgagaaccattattttactaagttactagtgtagtaattagtattttaccgttaagtgaccgttattagtattttaccgtt 19306431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 40939847 - 40939776
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagt-ttttaccg-ttagtgaccgttggttatattttaccgtt 114  Q
    ||||||||||||||||| || |||||||||||| || ||||| |||||||||||||||  ||||||||||||    
T  40939847 ttattttactaagttaccagagtagtgattagtattataccgtttagtgaccgttggtagtattttaccgtt 40939776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 417
Target Start/End: Original strand, 8268609 - 8268683
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatg 417  Q
    |||||||| ||||||||| ||  ||  || |||||  |||| |||||||||||||||||||||||||||||||||    
T  8268609 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatg 8268683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 417
Target Start/End: Original strand, 8275709 - 8275783
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatg 417  Q
    |||||||| ||||||||| ||  ||  || |||||  |||| |||||||||||||||||||||||||||||||||    
T  8275709 taggagctaaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatg 8275783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 12030159 - 12030207
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||| |||||||||||||||||||||    
T  12030159 tgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattg 12030207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 12032244 - 12032164
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatattttaccgt 113  Q
    ||||| ||| |||||||||||||||||||| ||||| |||||| |||||||||| |||||| |||| |  |||||||||||    
T  12032244 gtgagaaccattattttactaagttactagagtagtaattagtattttaccgttaagtgactgttgttagtattttaccgt 12032164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 13839145 - 13839097
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||| |||||||||||||||||||||    
T  13839145 tgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattg 13839097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 15859036 - 15859084
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||| |||||||||||||||||||||    
T  15859036 tgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattg 15859084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 51158030 - 51158078
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||| |||||||||||||||||||||    
T  51158030 tgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattg 51158078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 92
Target Start/End: Original strand, 55440396 - 55440444
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagt-ttttaccgttagtga 92  Q
    |||||||||||||||||||| |||||||||||| |||||||||| ||||    
T  55440396 ttattttactaagttactagagtagtgattagtattttaccgttggtga 55440444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 14219157 - 14219204
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttat 48  Q
    |||||||| |||||||||||||||||| ||||| ||||| ||||||||    
T  14219157 atggtaattttggtgagaattattttaataattagtgagaacccttat 14219204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 228
Target Start/End: Original strand, 16743810 - 16743877
Alignment:
Q  161 aatgggttaggcccattagaatttgagttgagcccattagtggagatgacactagggtcgtcttagaa 228  Q
    ||||||||| ||||| |||||  | |||| ||||||||||||||||| |||||||||| || ||||||    
T  16743810 aatgggttaagcccactagaaactaagttaagcccattagtggagataacactagggttgttttagaa 16743877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 120
Target Start/End: Original strand, 17912047 - 17912122
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttatattttaccgttgttagt 120  Q
    |||||||||||||||||||| |||    |||| ||||| |||||||||||||| || | ||||||||||| |||||    
T  17912047 ttattttactaagttactagagtaaaacttagattttatcgttagtgaccgttagtgacattttaccgttattagt 17912122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 34438845 - 34438988
Alignment:
Q  10 ttggtgagaatta-ttttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttggttatattt 107  Q
    ||||||||||||| ||||| | ||| ||||| |||  | ||||||||||||||||| |||    | || |||||||||| |||||||||| || ||||||    
T  34438845 ttggtgagaattacttttagtgattagtgagaaccgatgttttactaagttactagagtaaaattaagattttaccgtttagtgaccgttagtgatattt 34438944  T
Q  108 taccgttgttagt-aattaccgttgagtgtatagaaacttttga 150  Q
    ||||||| ||||| |||||||| | || || ||||||| |||||    
T  34438945 taccgttattagtgaattaccggttagagtgtagaaacatttga 34438988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 78
Target Start/End: Complemental strand, 8605517 - 8605484
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagtt 78  Q
    |||||||||||||||||||||||||| |||||||    
T  8605517 ttattttactaagttactagtgtagtaattagtt 8605484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 34560560 - 34560479
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatattttaccgtt 114  Q
    ||||| ||| |||||||| |||||||||||||||||  ||||| |||||||||| ||||||| ||| |  ||||||||||||    
T  34560560 gtgagaaccattattttattaagttactagtgtagttgttagtattttaccgttaagtgaccattgttagtattttaccgtt 34560479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 39657255 - 39657174
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtta-gtgaccgttggttatattttaccgtt 114  Q
    ||||| ||| ||||||| |||||||||| | ||| | |||||| ||||||||||| |||||||||| | |||||||||||||    
T  39657255 gtgagaaccattattttgctaagttactggggtaataattagtattttaccgttatgtgaccgttgttgatattttaccgtt 39657174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 80
Target Start/End: Original strand, 40038472 - 40038517
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagtttt 80  Q
    ||||| ||| ||||||||||||||||||||||| || |||||||||    
T  40038472 gtgagaaccattattttactaagttactagtgtggtaattagtttt 40038517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 50111638 - 50111691
Alignment:
Q  92 accgttggttatattttaccgttgttagt-aattaccgttgagtgtatagaaac 144  Q
    ||||||||| ||||||||||||| ||||| ||||||||||| |||| |||||||    
T  50111638 accgttggtgatattttaccgttattagtgaattaccgttgtgtgtgtagaaac 50111691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 2449250 - 2449298
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||    
T  2449250 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattg 2449298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 15879127 - 15879019
Alignment:
Q  10 ttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatatt 106  Q
    ||||||||||||||||| | |  || ||||| ||| || |||||||||||| |||| ||||| |||||| |||||||||| ||||||| ||| |  ||||    
T  15879127 ttggtgagaattatttttagtgtttagtgagaaccgttgttttactaagttcctagggtagtaattagtattttaccgttaagtgaccattgctagtatt 15879028  T
Q  107 ttaccgttg 115  Q
    |||||||||    
T  15879027 ttaccgttg 15879019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 17205437 - 17205365
Alignment:
Q  4 gtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgatta 75  Q
    ||||| ||||||||||||||||| | |  || ||||| ||| |||||||||||||||||||| ||||| ||||    
T  17205437 gtaattttggtgagaattatttttagtgtttagtgagaaccattattttactaagttactagggtagtaatta 17205365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 48422307 - 48422227
Alignment:
Q  10 ttggtgagaatta-ttttattaattggtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtta 88  Q
    ||||||||||||| ||||| |  || ||||| ||| |||||||||||||||||||| ||||| |||| | |||||||||||    
T  48422307 ttggtgagaattacttttagtggttagtgagaaccgttattttactaagttactagggtagtaattaatattttaccgtta 48422227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 152; Significance: 3e-80; HSPs: 2)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 4452 - 4222
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  4452 atggtaattttggtgagaattattttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggc 4353  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaat-ttgagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||| | || ||||||||||    
T  4352 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttttagaattatgttagaatgggttaggcccattagaatctagaattgagcccat 4253  T
Q  198 tagtggagatgacactagggtcgtcttagaa 228  Q
    ||  |||||| ||| |||||| ||| |||||    
T  4252 taagggagataacattagggttgtcatagaa 4222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 343 - 518
Target Start/End: Complemental strand, 4102 - 3926
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||||||||||||||| ||  ||| || |||||| |||| ||||||||||| ||||||||||||||||||||||  |||||| |||||||||||||||    
T  4102 taggagctgaattgaagcaagagttagggttaatcatcttctaaggtaaggggtttagttattatcataatcatgtacaatttttgcattttctcatgtt 4003  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||| ||  | |||||||||||    
T  4002 gtatgaaaatgggttgatgaacaattcttgctaaattcgtgctcttgttgtgatgctattttcttgtgcatgaattg 3926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 151; Significance: 1e-79; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 167839 - 167993
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  167839 atggtaattttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 167938  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgt 155  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  167939 tatattttaccgttgttagtaattaccgttgagtgtatagaaacttttgaattgt 167993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 145; Significance: 4e-76; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 318 - 518
Target Start/End: Original strand, 1153 - 1352
Alignment:
Q  318 agctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatg 417  Q
    ||||||||||||||||| |||||| |||||||||||||||||| ||||||| || |||||  ||||||||||| |||||||||||||||||| |||||||    
T  1153 agctttaggaatcaagttggtgacttaggagctgaattgaagcaaggattagggttaatcttcttcaaaggtaggggggttagttattatcacaatcatg 1252  T
Q  418 tgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaatt 517  Q
    |  | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1253 ta-atttttgcatttactcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaatt 1351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 144; Significance: 2e-75; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 4738 - 4968
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| || || ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4738 atggtaattttggtgagaattattttaatatttagtgagaacccttatattactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 4837  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaat-ttgagttgagcccat 197  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||  ||||| |||||||||||||||||||||||||||| | || ||||||||||    
T  4838 tatattttacccttgttagtaattactgttgagtgtatagaaactttttagaattatgttagaatgggttaggcccattagaatctagaattgagcccat 4937  T
Q  198 tagtggagatgacactagggtcgtcttagaa 228  Q
    ||  |||||| ||| |||||| ||| |||||    
T  4938 taagggagataacattagggttgtcatagaa 4968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 343 - 518
Target Start/End: Original strand, 5088 - 5264
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||||||||||||||| ||  ||| || |||||| ||||||||||||||| |||||||||||||||||||||||  |||||| ||||||||||| |||    
T  5088 taggagctgaattgaagcaagagttagggttaatcatcttcaaaggtaagggagttagttattatcataatcatgtacaatttttgcattttctcacgtt 5187  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||| ||  | |||||||||||    
T  5188 gtatgaaaatgggttgatgaacaattcttgttaaattcgtgctcttgctgtgatgctattttcttgtgcatgaattg 5264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 112037 - 112144
Alignment:
Q  10 ttggtgagaatta-ttttattaattggtgaggacccttattttactaagttactagtgtagtgatta-gtttttaccgtt-agtgaccgttggttatatt 106  Q
    ||||||||||||| ||||| | ||| ||||| ||  || ||||||||||||||||| ||| | |||| | |||||||||| ||||||||||||  |||||    
T  112037 ttggtgagaattacttttagtgattagtgagaactgttgttttactaagttactagagtaataattaaggttttaccgtttagtgaccgttggaaatatt 112136  T
Q  107 ttaccgtt 114  Q
    ||||||||    
T  112137 ttaccgtt 112144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 140; Significance: 4e-73; HSPs: 2)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 1040 - 1270
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| || || ||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  1040 atggtaattttggtgagaattattttaatatttagtgagaacccttattttactaagttactagtgtagtgattatattttaccgttagtgaccgttggt 1139  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    || |||||||||||||||||||||||||||||||||||||||||||||  || || ||||||||||||||||||||||||||||||  | ||||||||||    
T  1140 tagattttaccgttgttagtaattaccgttgagtgtatagaaactttttagagttatgttagaatgggttaggcccattagaatttataattgagcccat 1239  T
Q  198 tagtggagatgacactagggtcgtcttagaa 228  Q
    ||  |||||| ||| |||||| ||| |||||    
T  1240 taagggagataacattagggttgtcatagaa 1270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 343 - 518
Target Start/End: Original strand, 1390 - 1566
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||||||||||||||| ||  || ||| |||||  |||| ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  1390 taggagctgaattgaagcaagagtttaggttaatcttcttctaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgtt 1489  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| ||| ||| ||| ||  | |||||||||||    
T  1490 gtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgttgtaatgctattttcttgtgcatgaattg 1566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 140; Significance: 4e-73; HSPs: 4)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 13585 - 13815
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| || || ||||| ||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||    
T  13585 atggtaattttggtgagaattattttaatatttagtgagaacccttattttactaagttatcagtgtggtgattagtttttaccgttagtgaccgttggt 13684  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||  ||||| ||||||||||||||| |||||||||||||| |||||||||||||    
T  13685 tatattttaccgttgttagttattaccgttgagtgtatagaaactttttagaattatgttagaatgggttaagcccattagaatttagagttgagcccat 13784  T
Q  198 tagtggagatgacactagggtcgtcttagaa 228  Q
     |  |||||| ||| |||||| ||| |||||    
T  13785 caagggagataacattagggttgtcatagaa 13815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 309 - 518
Target Start/End: Original strand, 20953 - 21164
Alignment:
Q  309 ttgaagggaa-gctttaggaatcaagtggg-tgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttatta 406  Q
    |||||||||| |||| ||||||||| |||| | | ||||||||||||||||||| ||| ||| |  |||||| |||||||||||||||||||||||||||    
T  20953 ttgaagggaaagcttgaggaatcaattggggtaagctaggagctgaattgaagcaagggttaggattaatcatcttcaaaggtaagggggttagttatta 21052  T
Q  407 tcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgt 506  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  21053 tcataatcatgtacaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcttgctaaattcgtgctcttgttgtgatgttatgtttgt 21152  T
Q  507 atgcatgaattg 518  Q
    || ||| |||||    
T  21153 atccattaattg 21164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #3
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 309 - 518
Target Start/End: Original strand, 13899 - 14109
Alignment:
Q  309 ttgaagggaa-gctttaggaatcaagtggg-tgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttatta 406  Q
    |||||||||| |||| ||||||||| |||| | | ||||||||||||||||||| ||| ||| |  |||||| |||||||||||||||||||||||||||    
T  13899 ttgaagggaaagcttgaggaatcaattggggtaagctaggagctgaattgaagcaagggttaggattaatcatcttcaaaggtaagggggttagttatta 13998  T
Q  407 tcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgt 506  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||| |||    
T  13999 tcataatcatgtacaattttgcattttctcatgttgtatgaaaatgggttgatgcacaattcttgctaaa-tcgtgctcttgctgtgatgttatgtctgt 14097  T
Q  507 atgcatgaattg 518  Q
    ||||||||||||    
T  14098 atgcatgaattg 14109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 20650 - 20858
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| || || ||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||              
T  20650 atggtaattttggtgagaattattttaatatttagtgagaacccttattttactaagttaacagtgtagtgattagtttttaccgttagt---------- 20739  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||  ||||| ||||||||  |||||||||||||||||||| |||||||||||||    
T  20740 tatattttaccgttgttattaattaccgttgagtgtatagaaactttttagaattatgttagaagaggttaggcccattagaatttagagttgagcccat 20839  T
Q  198 tagtggagatgacactagg 216  Q
    ||  |||||| ||| ||||    
T  20840 taagggagataacattagg 20858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 140; Significance: 4e-73; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 10 - 228
Target Start/End: Complemental strand, 131299 - 131075
Alignment:
Q  10 ttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagttttt----accgttagtgaccgttggttatat 105  Q
    |||| ||||||||||||| || || ||||| |||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||    
T  131299 ttggcgagaattattttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttttttaccgttagtgaccgttggttatat 131200  T
Q  106 tttaccgttgttagtaattaccgttgagtgtatagaaactttt-gaattgtgttagaatgggttaggcccattaga-atttgagttgagcccattagtgg 203  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||||||  ||    
T  131199 tttaccgttgttagtaattaccgttgagtgtatagaaacttttagaattatgttagaatgggttaggcccattagagttttgagttgagcccattaaggg 131100  T
Q  204 agatgacactagggtcgtcttagaa 228  Q
    |||| ||| |||||| ||| |||||    
T  131099 agataacattagggttgtcatagaa 131075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 308 - 416
Target Start/End: Complemental strand, 130990 - 130880
Alignment:
Q  308 gttgaagggaa-gctttaggaatcaagtggg-tgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttatt 405  Q
    ||||||||||| |||| ||||||||| |||| ||||||||||||||||||||||| ||| ||| | ||||||| ||||||||||||||||||||||  ||    
T  130990 gttgaagggaaagcttgaggaatcaattggggtgacctaggagctgaattgaagcaagggttaggcataatcatcttcaaaggtaagggggttagtcttt 130891  T
Q  406 atcataatcat 416  Q
    |||||||||||    
T  130890 atcataatcat 130880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 89466 - 89514
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||| ||| |||||||||||||||||    
T  89466 tgctaaattcgtgctccaactgtgatgatatatttgtatgcatgaattg 89514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 130; Significance: 4e-67; HSPs: 2)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 3692 - 3460
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||||| ||||||||||||||||| | || || ||||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||     
T  3692 atggtaattttggtgagaattatttttaatatttagtgagaacccttattttactaagttactagtatagtgattagtttttaccgtttagtgaccgtta 3593  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagccc 195  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||  || || |||||||||||||||||||||||||||||| || ||||||||    
T  3592 gttatattttaccgttgttggtaattaccgttgagtgtatagaaactttttagagttatgttagaatgggttaggcccattagaatttagaattgagccc 3493  T
Q  196 attagtggagatgacactagggtcgtcttagaa 228  Q
    ||||  |||||| ||| |||||| ||| |||||    
T  3492 attaagggagataacattagggttgtcatagaa 3460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529; HSP #2
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 343 - 518
Target Start/End: Complemental strand, 3341 - 3166
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaattttgcattttctcatgttg 442  Q
    |||||||||||||||||| ||  ||  || |||||  |||| ||||||||||||||| ||||||||||||| ||||  ||||||||||||||||||||||    
T  3341 taggagctgaattgaagcaagagtttcggttaatcttcttctaaggtaagggggttaattattatcataattatgtacaattttgcattttctcatgttg 3242  T
Q  443 tatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3241 tatgaaaatgggttgatgaacaattcttgctaaattcgtgctcttgctgtgatgttatgtttgtatccatgaattg 3166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 130; Significance: 4e-67; HSPs: 3)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 17760 - 17560
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||| |||||| || || ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||    
T  17760 atggtaattttggtgagaatcattttaatatttagtgagaacccttattttactaagtttctagtgtagtgattagtttttaccgttagtgaccgttcgt 17661  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaatttgagttgagcccatt 198  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||  ||||| |||||||||| |||| ||||||||||||| || |||||| ||||    
T  17660 tatattttaccgttgttagtaattatcgttgagtgtatagaaactttttggaattatgttagaatgagttaagcccattagaattggaattgagctcatt 17561  T
Q  199 a 199  Q
    |    
T  17560 a 17560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 488 - 720
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttg 98  Q
    |||||||| ||||| ||||||||||| | || || ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  488 atggtaattttggttagaattatttttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgactgttg 587  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactt--ttgaattgtgttagaatgggttaggcccattagaat-ttgagttgagccc 195  Q
    ||||| ||||||||| |||||||||||| |||||||||||||| ||||  | ||||| ||||| ||||||||| |||||||||  | | || ||||||||    
T  588 gttatgttttaccgtcgttagtaattacagttgagtgtatagagactttctagaattatgttaaaatgggttaagcccattagggtctagaattgagccc 687  T
Q  196 attagtggagatgacactagggtcgtcttagaa 228  Q
    ||||   ||||||||| |||||| ||| |||||    
T  688 attaagagagatgacattagggttgtcatagaa 720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 968 - 1016
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||| |||||||||||||||||||||    
T  968 tgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattg 1016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1615 (Bit Score: 128; Significance: 6e-66; HSPs: 1)
Name: scaffold1615
Description:

Target: scaffold1615; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 241 - 11
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||| || |||||||| || || || || |||||||||||||||||||||||||||||||||||  ||||||||||||||||| || ||    
T  241 atggtaattttggtgcgagttattttaatatttagtaagaacccttattttactaagttactagtgtagtgattatattttaccgttagtgacctttcgt 142  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  || || |||||||||||||||||||||||||||||| || ||||||||||    
T  141 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttttagagttatgttagaatgggttaggcccattagaatttagaattgagcccat 42  T
Q  198 tagtggagatgacactagggtcgtcttagaa 228  Q
    ||  |||||| ||| |||||| ||| |||||    
T  41 taagggagataacattagggttgtcatagaa 11  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 128; Significance: 6e-66; HSPs: 2)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 10275 - 10505
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||| ||||||||||| |  || ||||| || |||||||||||||||||||| |||||||||||  |||||||||||||||||||| ||    
T  10275 atggtaattttggtgcgaattattttaatgtttagtgagaacacttattttactaagttactattgtagtgattatattttaccgttagtgaccgttcgt 10374  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  || || |||||||||||||||||||||||||||||| || ||||||||||    
T  10375 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttttagagttatgttagaatgggttaggcccattagaatttagaattgagcccat 10474  T
Q  198 tagtggagatgacactagggtcgtcttagaa 228  Q
    ||  |||||| ||| |||||| ||| |||||    
T  10475 taagggagataacattagggttgtcatagaa 10505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 343 - 496
Target Start/End: Original strand, 10624 - 10778
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||||||||||||||| ||  ||| || |||||| |||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  10624 taggagctgaattgaagcaagagttagggttaatcatcttcaaaggtaagggggttagttattatcataatcatgtacaatttttgcattttctcatgtt 10723  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||| |||||||    
T  10724 gtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgttgtgatg 10778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 126; Significance: 9e-65; HSPs: 1)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 259 - 27
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||||| ||||||||||||||||| | || || ||||| |||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||    
T  259 atggtaattttggtgagaattatttttaatatttagtgagaacccttattttattaagttattagtgtagtgattagtttttaccgtttagtgaccgttg 160  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagccc 195  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||   |||| |||||||||||||||||||||||||||||| || ||||||||    
T  159 gttatattttaccgttgttagtaattaccgttgagcgtatataaactttttataattatgttagaatgggttaggcccattagaatttagaattgagccc 60  T
Q  196 attagtggagatgacactagggtcgtcttagaa 228  Q
    ||||  |||||| ||| |||||| ||| |||||    
T  59 attaagggagataacattagggttgtcatagaa 27  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 126; Significance: 9e-65; HSPs: 2)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 3123 - 2891
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||||| ||||||||||||||||| | || || ||||| |||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||    
T  3123 atggtaattttggtgagaattatttttaatatttagtgagaacccttattttattaagttattagtgtagtgattagtttttaccgtttagtgaccgttg 3024  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagccc 195  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||   |||| |||||||||||||||||||||||||||||| || ||||||||    
T  3023 gttatattttaccgttgttagtaattaccgttgagcgtatataaactttttataattatgttagaatgggttaggcccattagaatttagaattgagccc 2924  T
Q  196 attagtggagatgacactagggtcgtcttagaa 228  Q
    ||||  |||||| ||| |||||| ||| |||||    
T  2923 attaagggagataacattagggttgtcatagaa 2891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 318 - 518
Target Start/End: Complemental strand, 2799 - 2596
Alignment:
Q  318 agctttaggaatcaagtggg-tgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcat 416  Q
    ||||| ||||||||| |||| | | ||||||||||||||||||| ||  ||  || |||||  |||| ||||||||||||||||||||||||||||||||    
T  2799 agcttgaggaatcaattggggtaagctaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcat 2700  T
Q  417 gtgtaa--ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatga 514  Q
    ||  ||  |||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||| |||||| ||| ||  | |||||||    
T  2699 gtacaaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttgctcaattcgtgctcttgccgtgatgctattttcttgtgcatga 2600  T
Q  515 attg 518  Q
    ||||    
T  2599 attg 2596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 126; Significance: 9e-65; HSPs: 3)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 32042 - 31822
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||| |||||| || ||  |||| ||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||| ||    
T  32042 atggtaattttggtgagaatcattttaatatttaatgagaacccttattttaccaagttactagtgtaatgattagtttttatcgttagtgaccgttcgt 31943  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaattt-gagttgagcccat 197  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||| ||||||||||||||||||| || ||||||||||    
T  31942 tatattttaccgttgttagtaattaccgttgagtggatagaaactttttggaattatgttagaatgagttaggcccattagaatttggaattgagcccat 31843  T
Q  198 tagtggagatgacactagggt 218  Q
    ||  |||||| ||| ||||||    
T  31842 taagggagataacattagggt 31822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 334 - 496
Target Start/End: Complemental strand, 31698 - 31535
Alignment:
Q  334 tgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaat-tttgcattt 432  Q
    ||||||||||||||||||||||||||| ||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  31698 tgggtgacctaggagctgaattgaagcaagggttagagataatcaacttcaaaggtaagggggttagttattatcataatcatgtacaatctttgcattt 31599  T
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatg 496  Q
    ||||||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||    
T  31598 tctcatgttgtatgaaaatgggttggtgaacaattgttgttaaattcgtgctcttgctgtgatg 31535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 433 - 495
Target Start/End: Complemental strand, 39935 - 39873
Alignment:
Q  433 tctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgat 495  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  39935 tctcatgttgtatgaaaatgggttgatgaacaattgttgctaaattcgtgctcttgctgtgat 39873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 121; Significance: 9e-62; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 7938 - 7790
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttgg 99  Q
    |||||||| |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7938 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgttgg 7839  T
Q  100 ttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt 148  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7838 ttataatttaccgttgttagtaattaccgttgagtgtatagaaactttt 7790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 385 - 488
Target Start/End: Complemental strand, 7547 - 7443
Alignment:
Q  385 aaggtaagggggttagttattatcataatca-tgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgc 483  Q
    |||||||||||||| ||| | |||||||||| | |  |||||| ||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  7547 aaggtaagggggtttgttttcatcataatcaatttcaaattttacatcttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgc 7448  T
Q  484 tcttg 488  Q
    |||||    
T  7447 tcttg 7443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 120; Significance: 4e-61; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 33983 - 34165
Alignment:
Q  1 atggtaatcttggtgagaattattt-tattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||||| |||||||||||||||| || || || || || |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  33983 atggtaattttggtgagaattatttataatatttagtaagaacccttattttaataagttactagtgtagtgattagtttttaccgtttagtgaccgttg 34082  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||| |||||||||    
T  34083 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttttagaattatgttagaatgggttaagcccattag 34165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 385 - 518
Target Start/End: Original strand, 34374 - 34520
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaatt-ttgcattttctcat--gttgtatgaaaatgggttga----------tgaacaattcatg 471  Q
    |||||||| |||||||||||||||||||||||||  | || ||||| ||||||||  |||||||||| |||||||||          || | ||||  ||    
T  34374 aaggtaagagggttagttattatcataatcatgttcatttattgcaatttctcatttgttgtatgaatatgggttgaattgaatgaatggataattattg 34473  T
Q  472 ctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||    
T  34474 ctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattg 34520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 120; Significance: 4e-61; HSPs: 4)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 12878 - 13060
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||||| ||||||||||||||||| | || || ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  12878 atggtaattttggtgagaattatttttaatatttagtgagaacccttattttactaagttactagtgtagcgattagtttttaccgtttagtgaccgttg 12977  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||| ||||||||||||| |||||||||    
T  12978 gttatattttaccgttgttagtaattaccgttgagtgtttagaaactttttagaattgttttagaatgggttaagcccattag 13060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 107683 - 107915
Alignment:
Q  1 atggtaatcttggtgagaattattttat-taattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttg 98  Q
    |||||||| ||||||||||||||||||  || || ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  107683 atggtaattttggtgagaattattttaaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgactgttg 107782  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaat-ttgagttgagccc 195  Q
    ||||| ||||||||| ||| ||||| || |||||||||||| ||||||||  ||||| ||||||||||||||| |||||||||  | | || ||||||||    
T  107783 gttatgttttaccgtcgttggtaatcacagttgagtgtataaaaactttttagaattatgttagaatgggttaagcccattagggtctagaattgagccc 107882  T
Q  196 attagtggagatgacactagggtcgtcttagaa 228  Q
    ||||  |||||||||| |||||| ||| |||||    
T  107883 attaagggagatgacattagggttgtcatagaa 107915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 385 - 459
Target Start/End: Original strand, 13268 - 13342
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgat 459  Q
    |||||||||||||||||||| |||||||||||||  || |||||||||||||||||||||||| ||||||||||||    
T  13268 aaggtaagggggttagttatcatcataatcatgttcaatttttgcattttctcatgttgtatg-aaatgggttgat 13342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 93367 - 93448
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatattttaccgtt 114  Q
    ||||| ||| |||||||||||||||||||| ||||| |||||| |||||||||| |||||||||||||  ||||||||||||    
T  93367 gtgagaaccattattttactaagttactagagtagtaattagtattttaccgttaagtgaccgttggtagtattttaccgtt 93448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 120; Significance: 4e-61; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 318 - 517
Target Start/End: Original strand, 64372 - 64570
Alignment:
Q  318 agctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatg 417  Q
    ||||| |||||||||||||||||| |||||||||||||||||| ||  ||  || |||||  |||| ||||||||||||||||||||||||| |||||||    
T  64372 agcttaaggaatcaagtgggtgacttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcacaatcatg 64471  T
Q  418 tgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaatt 517  Q
    |  | |||||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||    
T  64472 ta-atttttgcatttgctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgctgtgatgttatgtttatatgcatgaatt 64570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 108470 - 108239
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttgg 99  Q
    |||||||| |||||||||| ||||||| || || ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||     
T  108470 atggtaattttggtgagaagtattttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgttga 108371  T
Q  100 ttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaat-ttgagttgagccca 196  Q
    |||| ||||||||| |||||||||||| ||| |||||| ||||||||||   |||| ||||||||||||||| |||||||||  | | || |||||||||    
T  108370 ttatgttttaccgtcgttagtaattacagttaagtgtagagaaactttttataattatgttagaatgggttaagcccattagggtctagaattgagccca 108271  T
Q  197 ttagtggagatgacactagggtcgtcttagaa 228  Q
    |||  |||||||||| |||||| ||| |||||    
T  108270 ttaagggagatgacattagggttgtcatagaa 108239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 385 - 518
Target Start/End: Complemental strand, 108084 - 107950
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgc 483  Q
    |||||||||||||||||||| || ||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  108084 aaggtaagggggttagttatcattataatcatgttcaatttttgcattttctcatgttgtatgaaaatgggttgatgaacaattgttactaaattcgtgc 107985  T
Q  484 tcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||   |||| ||| |||||||||||||||||||||    
T  107984 tccaactgtaatgatatgtttgtatgcatgaattg 107950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 64074 - 64185
Alignment:
Q  3 ggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggtta 102  Q
    |||||| |||||||||||||||||| ||||| ||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  64074 ggtaattttggtgagaattattttaataattagtgagaacccttattttagtaagttactagtgcagtgattagtttttaccgttagtaaccgttggtta 64173  T
Q  103 tattttaccgtt 114  Q
     |||||| ||||    
T  64174 cattttatcgtt 64185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 120; Significance: 4e-61; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 164505 - 164687
Alignment:
Q  1 atggtaatcttggtgagaattat-tttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||||| |||||||||||||| ||||||  || ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  164505 atggtaattttggtgagaattatatttattgtttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgttg 164604  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    || ||||||||||||||||||||||||| |||||||||||||||||||||  ||||| ||||||||||||||| |||||||||    
T  164605 gtcatattttaccgttgttagtaattactgttgagtgtatagaaactttttagaattatgttagaatgggttaagcccattag 164687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 116; Significance: 9e-59; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 5961 - 5779
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    ||||| || ||||||||||||||||| | |  || ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5961 atggtcattttggtgagaattatttttaatgtttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgttg 5862  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||| ||||||||||||||| |||||||||    
T  5861 gttatattttaccgttgttagtaattatcgttgagtgtatagaaactttttagaattatgttagaatgggttaagcccattag 5779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 115; Significance: 3e-58; HSPs: 2)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 1100 - 1281
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttgg 99  Q
    |||||||| |||||||||||||||||| || || ||||| ||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  1100 atggtaattttggtgagaattattttaatatttagtgagaacccttattttacaaagttactactgtagtgattagtttttaccgcttagtgaccgttgg 1199  T
Q  100 ttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    |||| ||||||||||||||||||||||||||||||| ||| ||||||||  ||||| ||||||||||||||| |||||||||    
T  1200 ttatgttttaccgttgttagtaattaccgttgagtgaatataaactttttagaattatgttagaatgggttaagcccattag 1281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 343 - 518
Target Start/End: Original strand, 1451 - 1627
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcatgtt 441  Q
    |||||||||||||||||| ||| ||  || |||||  |||| ||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  1451 taggagctgaattgaagcaagggtttgggttaatcttcttctaaggtaagggggttagttattatcataatcatgttcaatttttgcattttctcatgtt 1550  T
Q  442 gtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||||||||||||  ||||||| |||||| |||||||||||| ||| ||  | |||||||||||    
T  1551 gtatgaaaatgggttgatgaacaattgttgctaaaatcgtgcacttgctgtgatgctattttcttgtgcatgaattg 1627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 113; Significance: 5e-57; HSPs: 2)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 35 - 179
Target Start/End: Original strand, 6742 - 6889
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttggttatattttaccgttgttagtaattaccgttgag 133  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  6742 gtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgttggtcatattttaccgttgttagtaattaccgttgag 6841  T
Q  134 tgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    |||||||||||||||  ||||| ||||||||||||||| |||||||||    
T  6842 tgtatagaaactttttagaattatgttagaatgggttaagcccattag 6889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 78
Target Start/End: Original strand, 535 - 568
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagtt 78  Q
    |||||||||||||||||||||||||| |||||||    
T  535 ttattttactaagttactagtgtagtaattagtt 568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 113; Significance: 5e-57; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 35 - 179
Target Start/End: Original strand, 4001 - 4148
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttggttatattttaccgttgttagtaattaccgttgag 133  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||    
T  4001 gtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgttggttatgttttaccattgttagtaattaccgttgag 4100  T
Q  134 tgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    |||||||||||||||  ||||||||||||||||||||| |||||||||    
T  4101 tgtatagaaactttttagaattgtgttagaatgggttaagcccattag 4148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 112; Significance: 2e-56; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 10 - 228
Target Start/End: Complemental strand, 22953 - 22732
Alignment:
Q  10 ttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttggttatatttt 108  Q
    |||||||||||||||||| || || | ||| |||||||||||||||||||||||| ||||||||||||||| |||||| |||||| ||||||||||||||    
T  22953 ttggtgagaattattttaatatttagcgagaacccttattttactaagttactagggtagtgattagtttt-accgtttagtgactgttggttatatttt 22855  T
Q  109 accgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattagaat-ttgagttgagcccattagtggag 205  Q
    |||||||||||||||||||||||||||||||||| |||||  ||||| ||||||||||||||| ||||||||| || | || ||||||||||||  ||||    
T  22854 accgttgttagtaattaccgttgagtgtatagaatctttttagaattatgttagaatgggttaagcccattaggatctagaattgagcccattaagggag 22755  T
Q  206 atgacactagggtcgtcttagaa 228  Q
    || ||| |||||| ||| |||||    
T  22754 ataacattagggttgtcatagaa 22732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 108; Significance: 5e-54; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 43671 - 43489
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||||| ||||||||||||||||| | |  || ||||| ||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  43671 atggtaattttggtgagaattatttttaatgtttagtgagaactattattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgttg 43572  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||  ||||| ||||||||||||||| |||||||||    
T  43571 gttatattttaccgttgttagtaactaccgttgagtgtatggaaactttttagaattatgttagaatgggttaagcccattag 43489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 473 - 518
Target Start/End: Complemental strand, 41896 - 41851
Alignment:
Q  473 taaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||    
T  41896 taaattcgtgctctaactgtgatgttatgtttgtatgcatgaattg 41851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 108; Significance: 5e-54; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 5 - 179
Target Start/End: Original strand, 49367 - 49545
Alignment:
Q  5 taatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttggtta 102  Q
    |||| ||||||||||||||||| | |  || ||||  ||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  49367 taattttggtgagaattatttttaatgtttagtgaaaaccattattttactaagttactagtgtagtgcttagtttttaccgtttagtgaccgttggtta 49466  T
Q  103 tattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||| |||||||||    
T  49467 tattttaccgttgttagtaattaccgttgagtgtatagaaactttttagaattatgttagaatgggttaagcccattag 49545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 35 - 179
Target Start/End: Original strand, 5755 - 5901
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttggttatattttaccgttgttagtaattaccgttgag 133  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||    
T  5755 gtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgaccattggttatattttaccgttgttagtaattagcgttgag 5854  T
Q  134 tgtatagaaactttt-gaattgtgttagaatgggttaggcccattag 179  Q
    |||||||||| |||| ||||| ||||||||||||||| |||||||||    
T  5855 tgtatagaaatttttagaattatgttagaatgggttaagcccattag 5901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 103; Significance: 5e-51; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 35 - 179
Target Start/End: Original strand, 9054 - 9202
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttggttatattttaccgttgttagtaattaccgttgag 133  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||| |    
T  9054 gtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgctggttatattttaccattgttagtaattaccgttgcg 9153  T
Q  134 tgtatagaaactttt---gaattgtgttagaatgggttaggcccattag 179  Q
    |||||||||||||||   ||||| ||||||||||||||| |||||||||    
T  9154 tgtatagaaacttttttagaattatgttagaatgggttaagcccattag 9202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 103; Significance: 5e-51; HSPs: 4)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 385 - 518
Target Start/End: Original strand, 9266 - 9397
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgct 484  Q
    ||||||||||||||||||||||||| ||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  9266 aaggtaagggggttagttattatcacaatcatgt--aattttgcatttgctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgct 9363  T
Q  485 cttgctgtgatgttatgtttgtatgcatgaattg 518  Q
     |||||||||||||||||||||||||||||||||    
T  9364 tttgctgtgatgttatgtttgtatgcatgaattg 9397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 385 - 518
Target Start/End: Original strand, 16164 - 16295
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgct 484  Q
    ||||||||||||||||||||||||| ||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  16164 aaggtaagggggttagttattatcacaatcatgt--aattttgcatttgctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgct 16261  T
Q  485 cttgctgtgatgttatgtttgtatgcatgaattg 518  Q
     |||||||||||||||||||||||||||||||||    
T  16262 tttgctgtgatgttatgtttgtatgcatgaattg 16295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 8890 - 8994
Alignment:
Q  10 ttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttatatttta 109  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8890 ttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttacatttta 8989  T
Q  110 ccgtt 114  Q
    |||||    
T  8990 ccgtt 8994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 15788 - 15892
Alignment:
Q  10 ttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttatatttta 109  Q
    |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15788 ttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttacatttta 15887  T
Q  110 ccgtt 114  Q
    |||||    
T  15888 ccgtt 15892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892 (Bit Score: 102; Significance: 2e-50; HSPs: 2)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 4138 - 3989
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||||| ||||| ||||||||||| | || || ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4138 atggtaattttggttagaattatttttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgtttagtgaccgttg 4039  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt 148  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  4038 gttataatttactgttgttagtaattaccgttgagtgtatagaaactttt 3989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 423 - 498
Target Start/End: Complemental strand, 3712 - 3637
Alignment:
Q  423 ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgtt 498  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||    
T  3712 ttttgcattttctcatgttttatgaaaatgggttgatgaacaattgatgctaaattagtgctcttactgtgatgtt 3637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 98; Significance: 5e-48; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 44291 - 44142
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||| | ||||||||||||||||| | || || ||||  |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  44291 atggtagttttggtgagaattatttttaatatttagtgaaaacccttattttactaagttactagtgaagtgattagtttttaccgtttagtgaccgttg 44192  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt 148  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  44191 gttataatttaccgttgttagtaattaccgttgagtgtatagaaactttt 44142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 54594 - 54445
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||| | ||||||||||||||||| | || || ||||  |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  54594 atggtagttttggtgagaattatttttaatatttagtgaaaacccttattttactaagttactagtgaagtgattagtttttaccgtttagtgaccgttg 54495  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt 148  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  54494 gttataatttaccgttgttagtaattaccgttgagtgtatagaaactttt 54445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 385 - 496
Target Start/End: Complemental strand, 54212 - 54100
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaa-ttttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgc 483  Q
    |||||||||||||| ||| | ||||||||||  |  || ||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  54212 aaggtaagggggtttgttttcatcataatcaattcaaatttttgcattttctcatgttttatgaaaatgggttgatgaacaattgatgctaaattcgtgc 54113  T
Q  484 tcttgctgtgatg 496  Q
    |||| ||||||||    
T  54112 tcttactgtgatg 54100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 97; Significance: 2e-47; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 343 - 518
Target Start/End: Complemental strand, 411 - 239
Alignment:
Q  343 taggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatcatgtgtaattttgcattttctcatgttg 442  Q
    |||||||||||||||||| ||  ||  |  |||||  |||| ||||||||||||||||||||||||| ||||||||  |||||||||||  ||||||||     
T  411 taggagctgaattgaagcgagagtttggattaatcttcttctaaggtaagggggttagttattatcaaaatcatgt--aattttgcattg-ctcatgtta 315  T
Q  443 tatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  314 tatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 767 - 654
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  767 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagggtagtgattagtttttactgttagtgaccgttggt 668  T
Q  101 tatattttaccgtt 114  Q
    || |||||||||||    
T  667 tacattttaccgtt 654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 96; Significance: 8e-47; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 13 - 179
Target Start/End: Complemental strand, 48913 - 48744
Alignment:
Q  13 gtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttggttatattttac 110  Q
    |||||||||||||| | || || ||||| |||||||||||||||||||||||||  |||||||| ||||||||||| |||||| ||||||||||||||||    
T  48913 gtgagaattatttttaatatttagtgagaacccttattttactaagttactagtacagtgatta-tttttaccgtttagtgactgttggttatattttac 48815  T
Q  111 cgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
    | ||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||| |||||||||    
T  48814 cattgttagtaattaccgttgagtgtatagaaactttttagaattatgttagaatgggttaagcccattag 48744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 48438 - 48390
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||| ||| |||||||||||||||||||||    
T  48438 tgctaaattcgtgctccaactgtaatgatatgtttgtatgcatgaattg 48390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 96; Significance: 8e-47; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 95722 - 95540
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttg 98  Q
    |||||||| ||||||||||||||||| | |  || ||||| ||| ||||||||| |||| ||||||| |||||||||||||||||||| |||||||||||    
T  95722 atggtaattttggtgagaattatttttaatgtttagtgagaaccattattttaccaagtgactagtgcagtgattagtttttaccgtttagtgaccgttg 95623  T
Q  99 gttatattttaccgttgttagtaattaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggcccattag 179  Q
     |||||||||||| ||||| ||||||||||||||||||||||||||||||  ||||| ||||||||||||||| |||||||||    
T  95622 attatattttaccattgttggtaattaccgttgagtgtatagaaactttttagaattatgttagaatgggttaagcccattag 95540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0682 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 4 - 175
Target Start/End: Original strand, 8072 - 8248
Alignment:
Q  4 gtaatcttggtgagaattatt-ttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttggtt 101  Q
    ||||| ||||||||||||||| ||| |  || ||||| ||| |||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||    
T  8072 gtaattttggtgagaattattgttagtgtttagtgagaaccattattttactaagttactagtgtagtaattagtttttaccatttagtgaccgttggtt 8171  T
Q  102 atattttaccgttgttagtaa-ttaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggccca 175  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||  ||||| | ||||||||||||| |||||    
T  8172 atattttaccgttgttagtaatttaccgttgagtgtatagaaactttttagaattattttagaatgggttaagccca 8248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 4 - 175
Target Start/End: Complemental strand, 11424 - 11248
Alignment:
Q  4 gtaatcttggtgagaattatt-ttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttggtt 101  Q
    ||||| ||||||||||||||| ||| |  || ||||| ||| |||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||    
T  11424 gtaattttggtgagaattattgttagtgtttagtgagaaccattattttactaagttactagtgtagtaattagtttttaccatttagtgaccgttggtt 11325  T
Q  102 atattttaccgttgttagtaa-ttaccgttgagtgtatagaaactttt--gaattgtgttagaatgggttaggccca 175  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||  ||||| | ||||||||||||| |||||    
T  11324 atattttaccgttgttagtaatttaccgttgagtgtatagaaactttttagaattattttagaatgggttaagccca 11248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 32167 - 32286
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| ||||||||||| |||||| || || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  32167 atggtaattttggtgagaataattttaatatttagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttagt 32266  T
Q  101 tatattttaccgttgttagt 120  Q
    ||||||||||||||||||||    
T  32267 tatattttaccgttgttagt 32286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 318 - 488
Target Start/End: Complemental strand, 7002 - 6831
Alignment:
Q  318 agctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatca-t 416  Q
    ||||||| |||||||||||||||| |||||||||||||||||| ||  ||  || |||||  |||| ||||||||||||||||||||||||||||||| |    
T  7002 agctttacgaatcaagtgggtgacttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatcataatcaat 6903  T
Q  417 gtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctcttg 488  Q
     |  |||||| ||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  6902 ttcaaattttacatcttctcatgttgtatgaaaatgggttgatgaacaattcatgtcaaattcgtgctcttg 6831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 7321 - 7212
Alignment:
Q  5 taatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttata 104  Q
    |||| |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  7321 taattttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttaca 7222  T
Q  105 ttttaccgtt 114  Q
    ||||||||||    
T  7221 ttttaccgtt 7212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 9598 - 9711
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  9598 atggtaattttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttgat 9697  T
Q  101 tatattttaccgtt 114  Q
    || |||||||||||    
T  9698 tacattttaccgtt 9711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 90; Significance: 3e-43; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 2718 - 2609
Alignment:
Q  5 taatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttata 104  Q
    |||| |||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  2718 taattttggtgagaattattttaataattagtgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttaca 2619  T
Q  105 ttttaccgtt 114  Q
    ||||||||||    
T  2618 ttttaccgtt 2609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 473 - 518
Target Start/End: Original strand, 36928 - 36973
Alignment:
Q  473 taaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||||||   |||||||| |||||||||||||||||||||    
T  36928 taaattcgtgctccaactgtgatgatatgtttgtatgcatgaattg 36973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 89; Significance: 1e-42; HSPs: 2)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 16833 - 17046
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||  || |  ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16833 atggtaattttggtgagaattattttcatattaagtgagaacccttattttactaagttactagtgtggtgattagtttttaccgttagtgaccgttggt 16932  T
Q  101 tatattttaccgttgttagtaattaccgttgagtgtatagaaactttt-gaattgtgttagaatgggttaggcccattagaa-tttgagttgagcccatt 198  Q
    ||||||                |||||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||| ||||||||||  |||||    
T  16933 tatatt----------------ttaccgttgagtgtatagaaacttttagaattatgttagaatgggttaggcctattagaattttgagttgaatccatt 17016  T
Q  199 agtggagatgacactagggtcgtcttagaa 228  Q
    |  |||||| ||| |||||| ||| |||||    
T  17017 aagggagataacattagggttgtcatagaa 17046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 312 - 416
Target Start/End: Original strand, 17136 - 17241
Alignment:
Q  312 aagggaagctttaggaatcaagtggg-tgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcat 410  Q
    |||| |||||| ||||||||| |||| ||||||||||||||||||||||| ||| ||| | ||||| | |||| |||||||||||||||||  | |||||    
T  17136 aaggaaagcttgaggaatcaattggggtgacctaggagctgaattgaagcaagggttaggaataataatcttctaaggtaagggggttagtcttcatcat 17235  T
Q  411 aatcat 416  Q
    ||||||    
T  17236 aatcat 17241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 10 - 148
Target Start/End: Original strand, 33969 - 34110
Alignment:
Q  10 ttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttggttatattt 107  Q
    ||||||||||||||||| | |  || ||||| ||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  33969 ttggtgagaattatttttagtgtttagtgagaaccattattttactaagttactagtgtagtaattagtttttaccgtttagtgaccgttggttatattt 34068  T
Q  108 taccgttgttagtaa-ttaccgttgagtgtatagaaactttt 148  Q
    |||| |||||||||| ||||||||||||||||||||| ||||    
T  34069 taccattgttagtaatttaccgttgagtgtatagaaattttt 34110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 82; Significance: 2e-38; HSPs: 4)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 45 - 169
Target Start/End: Complemental strand, 45718 - 45590
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttggttatattttaccgttgttagtaa-ttaccgttgagtgtatagaa 142  Q
    |||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||    
T  45718 ttattttactaagttactagtgtagtaattagttgttaccgtttagtgaccgttggttatattttgccgttgttagtaatttaccgttaagtgtatagaa 45619  T
Q  143 ac--ttttgaattgtgttagaatgggtta 169  Q
    ||  ||| |||||||||||||||||||||    
T  45618 acattttagaattgtgttagaatgggtta 45590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 45 - 169
Target Start/End: Complemental strand, 55104 - 54976
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttggttatattttaccgttgttagtaa-ttaccgttgagtgtatagaa 142  Q
    ||||||||||||||| |||||||||| ||||||| |||||||| ||||||||||||||||||||| |||| |||||||| |||||||| |||||||||||    
T  55104 ttattttactaagtttctagtgtagtaattagttgttaccgtttagtgaccgttggttatattttgccgtcgttagtaatttaccgttaagtgtatagaa 55005  T
Q  143 ac--ttttgaattgtgttagaatgggtta 169  Q
    ||  ||| || || |||||||||||||||    
T  55004 acattttagagttatgttagaatgggtta 54976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 385 - 518
Target Start/End: Complemental strand, 45369 - 45234
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaatt-ttgcattttctcat-gttgtatgaaaatgggttgatgaacaattcatgctaaattcgtg 482  Q
    |||||||||||||||||  | |||||||||||||  |||| ||||| |||||||| |||||||||||||||||||||||| ||||  || ||||||||||    
T  45369 aaggtaagggggttagtcttcatcataatcatgttcaattattgcaatttctcattgttgtatgaaaatgggttgatgaataattgttgttaaattcgtg 45270  T
Q  483 ctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    | |||| ||||||| ||| ||  | |||||||||||    
T  45269 cccttgttgtgatgctattttgatgtgcatgaattg 45234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 385 - 518
Target Start/End: Complemental strand, 54755 - 54620
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaatt-ttgcattttctcat-gttgtatgaaaatgggttgatgaacaattcatgctaaattcgtg 482  Q
    ||||||||| |||||||  | |||||||||||||  |||| ||||| |||||||| |||||||||||||||||||||||| ||||  || ||||||||||    
T  54755 aaggtaaggtggttagtcttcatcataatcatgttcaattattgcaatttctcattgttgtatgaaaatgggttgatgaataattgttgttaaattcgtg 54656  T
Q  483 ctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
      |||||||||||| ||| ||  | |||||||||||    
T  54655 tccttgctgtgatgctattttcttgtgcatgaattg 54620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 78; Significance: 4e-36; HSPs: 2)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 318 - 486
Target Start/End: Original strand, 23600 - 23769
Alignment:
Q  318 agctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatcataatca-t 416  Q
    |||||||||||||||||||||||| ||||| |||||||||||| ||  ||  || |||||  |||| ||| ||||||||||||||||||||||| ||| |    
T  23600 agctttaggaatcaagtgggtgacttaggaactgaattgaagcaagagtttgggttaatcttcttctaagttaagggggttagttattatcatattcaat 23699  T
Q  417 gtgtaattttgcattttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgctct 486  Q
     |  |||||| ||| |||||||||||||||||||||||||||||||||| |||||  |||||||||||||    
T  23700 ttcaaattttacatcttctcatgttgtatgaaaatgggttgatgaacaactcatgtcaaattcgtgctct 23769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 13 - 109
Target Start/End: Original strand, 23289 - 23385
Alignment:
Q  13 gtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggttatatttta 109  Q
    ||||||||||||||| |||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||||||    
T  23289 gtgagaattattttaataattaatgagaacccttattttactaagttactagtgtagtgattagtttttaccgttagtgacagttgattacatttta 23385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1714 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold1714
Description:

Target: scaffold1714; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 97 - 1
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgtt 97  Q
    |||||||| |||||||||||||||||| ||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  97 atggtaattttggtgagaattattttaataattagtgagaacccttatttaactaagttactagtgtagtgattagtttttaccgttagtgaccgtt 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0850 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0850
Description:

Target: scaffold0850; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 5093 - 5185
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||| |||||||||||||||||| || || ||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5093 atggtaattttggtgagaattattttaatagttagtgagaacctttattttactaagttactagtgtagtgattagattttaccgttagtgac 5185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 6080 - 5988
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgac 93  Q
    |||||||| |||||||||||||||||| || || ||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6080 atggtaattttggtgagaattattttaatagttagtgagaacctttattttactaagttactagtgtagtgattagattttaccgttagtgac 5988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 58; Significance: 4e-24; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 385 - 488
Target Start/End: Original strand, 12045 - 12149
Alignment:
Q  385 aaggtaagggggttagttattatcataatca-tgtgtaattttgcattttctcatg-ttgtatgaaaatgggttgatgaacaattcatgctaaattcgtg 482  Q
    ||||||||||||||||||||||||||||||| | |  |||||| ||||| |||||| |||||||||||||||||||||||||||| ||| ||||||||||    
T  12045 aaggtaagggggttagttattatcataatcaatttcaaatttttcattt-ctcatggttgtatgaaaatgggttgatgaacaattgatgttaaattcgtg 12143  T
Q  483 ctcttg 488  Q
    ||||||    
T  12144 ctcttg 12149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 56; Significance: 6e-23; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 385 - 518
Target Start/End: Original strand, 34076 - 34210
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaatttt-gcattttctcat-gttgtatgaaaatgggttgatgaacaattcatgctaaattcgtg 482  Q
    |||||||||||||||||  | |||||||||||||  |||||| |||||||||||| ||||||||||| |||||||||||| ||||  |||||||||||||    
T  34076 aaggtaagggggttagtcttcatcataatcatgttcaatttttgcattttctcattgttgtatgaaa-tgggttgatgaaaaattgttgctaaattcgtg 34174  T
Q  483 ctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||||| | ||| ||  | |||||||||||    
T  34175 ctcttgctgtgaagctattttcttgtgcatgaattg 34210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 247454 - 247502
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||| ||| |||||||||||||||||||||    
T  247454 tgctaaattcgtgctccaactgtaatgatatgtttgtatgcatgaattg 247502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 5086 - 5206
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttg 98  Q
    |||||| | ||||||||||||||||| | |  || ||||| ||| ||||||||||||||||||||| |||| |||||||||||||| ||||| |||||||    
T  5086 atggtatttttggtgagaattatttttaatgtttagtgagaaccattattttactaagttactagtatagtaattagtttttaccgtttagtaaccgttg 5185  T
Q  99 gttatattttaccgttgttag 119  Q
    |||||||||||| ||| ||||    
T  5186 gttatattttacagttattag 5206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 318 - 409
Target Start/End: Original strand, 154282 - 154373
Alignment:
Q  318 agctttaggaatcaagtgggtgacctaggagctgaattgaagctaggattaaggataatcaacttcaaaggtaagggggttagttattatca 409  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||  ||  || |||||  |||| |||||||||||||||||||||||||    
T  154282 agctttaggaatcaagtgggtgacttaggagctgaattgaagcaagagtttgggttaatcttcttctaaggtaagggggttagttattatca 154373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 116
Target Start/End: Complemental strand, 36173 - 36100
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatattttaccgttgt 116  Q
    ||||||||| |||||||||||||||| |||||| |||||||||| ||||||||||| |  ||||||||||||||    
T  36173 ttattttaccaagttactagtgtagtaattagtattttaccgttaagtgaccgttgttagtattttaccgttgt 36100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 120
Target Start/End: Complemental strand, 34410 - 34297
Alignment:
Q  10 ttggtgagaatta-ttttattaattggtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatatt 106  Q
    ||||||||||||| ||||| | ||| ||||| ||| ||||||||||||||||||||  |||| |||||| |||||||||| ||||||||||||| |||||    
T  34410 ttggtgagaattacttttagtgattagtgagaaccgttattttactaagttactagattagtaattagtattttaccgtttagtgaccgttggtgatatt 34311  T
Q  107 ttaccgttgttagt 120  Q
    |||||||| |||||    
T  34310 ttaccgttattagt 34297  T

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Target: scaffold0518 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 10372 - 10453
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagttttta 82  Q
    |||||||| ||||||||||| |||||| || ||  |||| ||||||||||||| |||||||||||||| |||||||||||||    
T  10372 atggtaattttggtgagaatcattttaatatttaatgagaacccttattttacaaagttactagtgtaatgattagttttta 10453  T

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Target: scaffold0095 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 39 - 114
Target Start/End: Original strand, 33248 - 33326
Alignment:
Q  39 ggacccttattttactaagttactagtgtagtgattagt-ttttaccg--ttagtgaccgttggttatattttaccgtt 114  Q
    ||||| |||||||||||||||||||| ||||| |||||| ||||||||  ||||||||||||||| |||||||||||||    
T  33248 ggaccgttattttactaagttactagagtagtaattagtattttaccgttttagtgaccgttggtgatattttaccgtt 33326  T

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Target: scaffold0010 (Bit Score: 44; Significance: 8e-16; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 137458 - 137521
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactag 64  Q
    |||||||| |||||||||||||||||| || || ||||| ||||||||||||||||||||||||    
T  137458 atggtaattttggtgagaattattttaatatttagtgagaacccttattttactaagttactag 137521  T

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Target: scaffold0010; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 31753 - 31672
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtta-gtgaccgttggttatattttaccgtt 114  Q
    ||||| ||| ||||||||||||||||||||||| || |||||| |||||||||||  ||||||||| |  ||||||||||||    
T  31753 gtgagaaccattattttactaagttactagtgtggtaattagtattttaccgttatatgaccgttgatagtattttaccgtt 31672  T

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Target: scaffold0361 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 464 - 517
Target Start/End: Complemental strand, 3447 - 3394
Alignment:
Q  464 aattcatgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaatt 517  Q
    |||| |||||||||||||||||| |||||||||||| |||||||||||||||||    
T  3447 aattgatgctaaattcgtgctctagctgtgatgttaagtttgtatgcatgaatt 3394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 3925 - 3805
Alignment:
Q  1 atggtaatcttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttg 98  Q
    |||||||| || |||||||||||||| | |  || ||||  ||| ||||||||||||||||||||| |||| |||||||||||||| ||||| | |||||    
T  3925 atggtaattttagtgagaattatttttaatgtttagtgacaaccattattttactaagttactagtatagtaattagtttttaccgtttagtta-cgttg 3827  T
Q  99 gttatattttaccgttgttagt 120  Q
    ||| |||||||||||| |||||    
T  3826 gttttattttaccgttattagt 3805  T

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Target: scaffold0162 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 8192 - 8240
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||    
T  8192 tgctaaattcgtgctctaactgtgatgttatgtttgtatgcatgaattg 8240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 9742 - 9635
Alignment:
Q  10 ttggtgagaatta-ttttattaattggtgaggacccttattttactaagttactagtgtagtgatta-gtttttaccgtt-agtgaccgttggttatatt 106  Q
    ||||||||||||| ||||| | ||| ||||| ||| || ||||||||||||||||| ||| | |||| | |||||||||| ||||||||||||| |||||    
T  9742 ttggtgagaattacttttagtgattagtgagaaccgttgttttactaagttactagagtaataattaaggttttaccgtttagtgaccgttggtaatatt 9643  T
Q  107 ttaccgtt 114  Q
    ||||||||    
T  9642 ttaccgtt 9635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 36606 - 36724
Alignment:
Q  1 atggtaatcttggtgagaattattttattaattggtgaggacccttattttactaagttactagtgtagtgattagtttttaccgttagtgaccgttggt 100  Q
    |||||||| |||||||||||||||||| ||||| ||||| |   | |||||||||||||||||| |||    |||| ||||| ||||||||| |||| ||    
T  36606 atggtaattttggtgagaattattttaataattagtgagaatagt-attttactaagttactagagtaaaacttagattttatcgttagtgatcgttagt 36704  T
Q  101 tatattttaccgttgttagt 120  Q
     ||||||||||||| |||||    
T  36705 gatattttaccgttattagt 36724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 37078 - 37126
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||    
T  37078 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattg 37126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 86088 - 85981
Alignment:
Q  10 ttggtgagaatta-ttttattaattggtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccg-ttagtgaccgttggttatatt 106  Q
    ||||||||||||| ||||| ||||| ||||  |||  ||||||||||||||| ||| |||||||||||| |||||||| |||||||| |||||| |||||    
T  86088 ttggtgagaattacttttagtaattagtgaaaaccgctattttactaagttattagagtagtgattagtattttaccgtttagtgactgttggtgatatt 85989  T
Q  107 ttaccgtt 114  Q
    ||| ||||    
T  85988 ttatcgtt 85981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 385 - 518
Target Start/End: Complemental strand, 12449 - 12316
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaattttgcat-tttctcatgttgtatgaaaatgggttgatgaacaattcatgctaaattcgtgc 483  Q
    |||||||||||||||||  ||||||||||||| | |||||||| |  ||||  ||| ||||||||| |  | | ||| | ||||  ||||||||||||||    
T  12449 aaggtaagggggttagtctttatcataatcatct-taattttgtaactttcaaatgctgtatgaaattttgattatggataattgttgctaaattcgtgc 12351  T
Q  484 tcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||  |||||||| |||||||||||||||||||||    
T  12350 tctaactgtgatgatatgtttgtatgcatgaattg 12316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 161 - 227
Target Start/End: Original strand, 57165 - 57231
Alignment:
Q  161 aatgggttaggcccattagaatttgagttgagcccattagtggagatgacactagggtcgtcttaga 227  Q
    ||||||||| ||||| |||||  | |||||||||||||||||||||| |||||||||| ||||||||    
T  57165 aatgggttaagcccactagaaactaagttgagcccattagtggagataacactagggttgtcttaga 57231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 69862 - 69906
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagt-ttttaccgtta 88  Q
    |||||||||||||||||||| ||||| |||||| |||||||||||    
T  69862 ttattttactaagttactagagtagtaattagtattttaccgtta 69906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 119 - 187
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagt-ttttaccg-ttagtgaccgttggttatattttacc 111  Q
    |||||||||||||||||||| |||||||||||| |||||||| ||||| |||||||||  |||||||||    
T  119 ttattttactaagttactagagtagtgattagtattttaccgtttagttaccgttggtggtattttacc 187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 9635 - 9700
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagt-ttttaccg-ttagtgaccgttggttatatttt 108  Q
    |||||||||||||||||||| ||||||||||||  ||||||| ||||||| ||||||| |||||||    
T  9635 ttattttactaagttactagagtagtgattagtagtttaccgtttagtgatcgttggtgatatttt 9700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 385 - 518
Target Start/End: Complemental strand, 13855 - 13709
Alignment:
Q  385 aaggtaagggggttagttattatcataatcatgtgtaatt-ttgcattttctca--tgttgtatgaaaatgggttg----------atgaacaattcatg 471  Q
    |||||||||||||||||  | ||||||||||||| || || ||||| |||||||  ||||||||||| ||||||||          ||| | ||||  ||    
T  13855 aaggtaagggggttagtcttcatcataatcatgtttatttattgcaatttctcatttgttgtatgaatatgggttgaattgaataaatggataattgttg 13756  T
Q  472 ctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    |||||||||||||||  || |||||||||||||||||||||||||||    
T  13755 ctaaattcgtgctctaactttgatgttatgtttgtatgcatgaattg 13709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 384 - 416
Target Start/End: Complemental strand, 42709 - 42677
Alignment:
Q  384 aaaggtaagggggttagttattatcataatcat 416  Q
    ||||||||||||||||||| |||||||||||||    
T  42709 aaaggtaagggggttagtttttatcataatcat 42677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 45 - 114
Target Start/End: Complemental strand, 6390 - 6319
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatattttaccgtt 114  Q
    |||||||||||||||||||| ||||| |||||| ||||||| || ||||||||||| | |||||||||||||    
T  6390 ttattttactaagttactagagtagtaattagtattttacctttaagtgaccgttgttgatattttaccgtt 6319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 21954 - 22025
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatattttaccgtt 114  Q
    |||||||||||||||||||| ||||| |||||| |||||||||| ||||||| ||| | |||||||||||||    
T  21954 ttattttactaagttactagagtagtaattagtattttaccgttaagtgaccattgttgatattttaccgtt 22025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 116046 - 116153
Alignment:
Q  10 ttggtgagaattatttt-attaattggtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatatt 106  Q
    ||||||||||||||||| | |  || ||||| ||| ||||||| ||||||||||||| |||| |||||| |||||||||| ||||||| ||| | |||||    
T  116046 ttggtgagaattatttttagtgtttagtgagaaccattattttgctaagttactagtttagtaattagtattttaccgttaagtgaccattgttgatatt 116145  T
Q  107 ttaccgtt 114  Q
    ||||||||    
T  116146 ttaccgtt 116153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1600 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1600
Description:

Target: scaffold1600; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 227
Target Start/End: Complemental strand, 98 - 32
Alignment:
Q  161 aatgggttaggcccattagaatttgagttgagcccattagtggagatgacactagggtcgtcttaga 227  Q
    ||||||||| ||||| |||||  | ||||||||||| |||||||||| |||||||||| ||||||||    
T  98 aatgggttaagcccactagaaactaagttgagcccactagtggagataacactagggttgtcttaga 32  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 98
Target Start/End: Complemental strand, 54071 - 53973
Alignment:
Q  4 gtaatcttggtgagaattatttt-attaattggtgaggacccttatttt-actaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttg 98  Q
    ||||| ||||||||||||||||| | |  || ||||| ||| ||||||| ||||||||||||||||||| |||||| |||||||||| |||||||||||    
T  54071 gtaattttggtgagaattatttttagtgtttagtgagaaccattatttttactaagttactagtgtagtaattagtattttaccgttaagtgaccgttg 53973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 9100 - 9052
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||| |||||||||||||||||||||    
T  9100 tgctaaattcgtgctccatctgtgatgatatgtttgtatgcatgaattg 9052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 144
Target Start/End: Complemental strand, 1989 - 1920
Alignment:
Q  77 tttttaccgtt-agtgaccgttggttatattttaccgttgttagt-aattaccgttgagtgtatagaaac 144  Q
    ||||||||||| ||||||||||||| ||||||||||||| ||||| |||||||| | ||||| |||||||    
T  1989 tttttaccgtttagtgaccgttggtgatattttaccgttattagtgaattaccggttagtgtgtagaaac 1920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 186 - 227
Target Start/End: Original strand, 13083 - 13124
Alignment:
Q  186 agttgagcccattagtggagatgacactagggtcgtcttaga 227  Q
    |||||||||||||||||||||| |||||||||| ||||||||    
T  13083 agttgagcccattagtggagataacactagggttgtcttaga 13124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 546 - 594
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||| |||||||||||||||||||||    
T  546 tgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattg 594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 5780 - 5732
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   || |||||||||||||||||||||||||||    
T  5780 tgctaaattcgtgctccaactttgatgttatgtttgtatgcatgaattg 5732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0643 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0643
Description:

Target: scaffold0643; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 97
Target Start/End: Complemental strand, 216 - 152
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgtt 97  Q
    ||||| ||| |||||||||||||||||||| ||||| |||||| |||||||||| ||||||||||    
T  216 gtgagaaccgttattttactaagttactagggtagtaattagtattttaccgttaagtgaccgtt 152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 6076 - 6124
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||| |||||||||||||||||||||    
T  6076 tgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattg 6124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 3594 - 3642
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||| |||||||||||||||||||||    
T  3594 tgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattg 3642  T

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Target: scaffold0195 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 19457 - 19409
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||| |||||||||||||||||||||    
T  19457 tgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattg 19409  T

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Target: scaffold0195; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 21541 - 21493
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||| |||||||||||||||||||||    
T  21541 tgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattg 21493  T

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Target: scaffold0150 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 77
Target Start/End: Complemental strand, 29302 - 29227
Alignment:
Q  4 gtaatcttggtgagaattattttattaa--ttggtgaggacccttattttactaagttactagtgtagtgattagt 77  Q
    ||||| ||||||||||||||||| ||    || ||||| ||| |||||||||||||||||||||||||| ||||||    
T  29302 gtaattttggtgagaattatttttttgtgtttagtgagaaccattattttactaagttactagtgtagtaattagt 29227  T

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Target: scaffold0106 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 41980 - 41932
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||| |||||||||||||||||||||    
T  41980 tgctaaattcgtgctccaactgtgatgatatgtttgtatgcatgaattg 41932  T

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Target: scaffold0452 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 2326 - 2369
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagtt 78  Q
    ||||| ||| |||||||||||||||||||||||||| |||||||    
T  2326 gtgagaaccattattttactaagttactagtgtagtaattagtt 2369  T

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Target: scaffold0035 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 108957 - 109064
Alignment:
Q  10 ttggtgagaatta-ttttattaattggtgaggacccttattttactaagttactagtgtagtgatta-gtttttaccgtt-agtgaccgttggttatatt 106  Q
    ||||||||||||| ||||| | ||| ||||| ||| || ||||||||||||||||| ||| | |||| | ||||| |||| |||||| |||||| |||||    
T  108957 ttggtgagaattaattttagtgattagtgagaaccgtttttttactaagttactagagtaataattaaggttttatcgtttagtgacagttggtgatatt 109056  T
Q  107 ttaccgtt 114  Q
    ||||||||    
T  109057 ttaccgtt 109064  T

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Target: scaffold0035; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 117458 - 117565
Alignment:
Q  10 ttggtgagaatta-ttttattaattggtgaggacccttattttactaagttactagtgtagtgatta-gtttttaccgtt-agtgaccgttggttatatt 106  Q
    ||||||||||||| ||||| | ||| ||||| ||| || ||||||||||||||||| ||| | |||| | ||||| |||| |||||| |||||| |||||    
T  117458 ttggtgagaattaattttagtgattagtgagaaccgtttttttactaagttactagagtaataattaaggttttatcgtttagtgacagttggtgatatt 117557  T
Q  107 ttaccgtt 114  Q
    ||||||||    
T  117558 ttaccgtt 117565  T

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Target: scaffold0521 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 35 - 77
Target Start/End: Complemental strand, 11826 - 11784
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagt 77  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||    
T  11826 gtgagaaccattattttactaagttactagtgtagtaattagt 11784  T

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Target: scaffold0498 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 470 - 516
Target Start/End: Complemental strand, 9129 - 9083
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaat 516  Q
    ||||||||||||||||    |||||||||||||||||||||||||||    
T  9129 tgctaaattcgtgctccatttgtgatgttatgtttgtatgcatgaat 9083  T

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Target: scaffold1295 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 835 - 754
Alignment:
Q  35 gtgaggacccttattttactaagttactagtgtagtgattagt-ttttaccgtta-gtgaccgttggttatattttaccgtt 114  Q
    ||||| ||| ||||||| |||||||||||| ||||| |||| | ||||||||||| |||||| ||| | |||||||||||||    
T  835 gtgagaaccattattttgctaagttactagggtagtaattaatattttaccgttacgtgacccttgttgatattttaccgtt 754  T

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Target: scaffold0700 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 114
Target Start/End: Complemental strand, 3218 - 3149
Alignment:
Q  47 attttactaagttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatattttaccgtt 114  Q
    |||||||||||||||||||||||| ||| || |||||||||| ||||| ||||| |  ||||||||||||    
T  3218 attttactaagttactagtgtagtaattcgtattttaccgttgagtgaacgttgttagtattttaccgtt 3149  T

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Target: scaffold0151 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 78
Target Start/End: Original strand, 21941 - 21974
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagtt 78  Q
    |||||||||||||||||||||||||| |||||||    
T  21941 ttattttactaagttactagtgtagtaattagtt 21974  T

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Target: scaffold0218 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 120
Target Start/End: Original strand, 4732 - 4808
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagtttttaccgtt-agtgaccgttggttatattttaccgttgttagt 120  Q
    |||||||||||||||||||| |||    | || |||||||||| |||||||||| || ||||||||||||| |||||    
T  4732 ttattttactaagttactagagtaaaattgagattttaccgtttagtgaccgttagtgatattttaccgttattagt 4808  T

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Target: scaffold0141 (Bit Score: 29; Significance: 0.0000007; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 22791 - 22743
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||    
T  22791 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattg 22743  T

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Target: scaffold0141; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Complemental strand, 27046 - 26998
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||    
T  27046 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattg 26998  T

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Target: scaffold0124 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 1594 - 1642
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   || ||||| |||||||||||||||||||||    
T  1594 tgctaaattcgtgctccaactttgatgatatgtttgtatgcatgaattg 1642  T

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Target: scaffold0122 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 45 - 120
Target Start/End: Original strand, 19497 - 19573
Alignment:
Q  45 ttattttactaagttactagtgtagtgattagtttttaccg-ttagtgaccgttggttatattttaccgttgttagt 120  Q
    |||||||||||||||||||| |||  | | || |||||||| |||||||||||| || | ||||||||||| |||||    
T  19497 ttattttactaagttactagagtaaagttgagattttaccgtttagtgaccgttagtgacattttaccgttattagt 19573  T

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Target: scaffold0117 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 114
Target Start/End: Original strand, 11100 - 11168
Alignment:
Q  48 ttttactaagttactagtgtag-tgattagtttttaccgtt-agtgaccgttggttatattttaccgtt 114  Q
    ||||||||||||||||| |||  | |||||  ||||||||| ||||||||||||| |||||||||||||    
T  11100 ttttactaagttactagagtaaataattaggatttaccgtttagtgaccgttggtgatattttaccgtt 11168  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 71322 - 71262
Alignment:
Q  56 agttactagtgtagtgattagt-ttttaccgtt-agtgaccgttggttatattttaccgtt 114  Q
    ||||||||| ||| | |||||| |||||||||| ||||||||||||| |||||||||||||    
T  71322 agttactagagtaataattagtattttaccgtttagtgaccgttggtgatattttaccgtt 71262  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 51194 - 51242
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||   |||||||| ||| |||||||||||||||||    
T  51194 tgctaaattcgtgctccaactgtgatgatatatttgtatgcatgaattg 51242  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 470 - 518
Target Start/End: Original strand, 123176 - 123224
Alignment:
Q  470 tgctaaattcgtgctcttgctgtgatgttatgtttgtatgcatgaattg 518  Q
    ||||||||||||||||    ||||||| |||||||||||||||||||||    
T  123176 tgctaaattcgtgctccaattgtgatgatatgtttgtatgcatgaattg 123224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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