View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3447_low_8 (Length: 499)

Name: NF3447_low_8
Description: NF3447
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3447_low_8
NF3447_low_8
[»] chr7 (49 HSPs)
chr7 (234-481)||(3530683-3530930)
chr7 (267-481)||(3526649-3526863)
chr7 (270-481)||(3547985-3548196)
chr7 (96-237)||(3531040-3531181)
chr7 (270-481)||(3554201-3554412)
chr7 (152-232)||(6854092-6854173)
chr7 (152-232)||(15994070-15994153)
chr7 (152-232)||(23653398-23653478)
chr7 (162-225)||(41383937-41384000)
chr7 (163-237)||(5800760-5800834)
chr7 (152-232)||(19371723-19371801)
chr7 (152-225)||(21028509-21028582)
chr7 (181-234)||(21080194-21080247)
chr7 (162-237)||(39151799-39151871)
chr7 (152-232)||(45000937-45001017)
chr7 (163-237)||(38175089-38175164)
chr7 (151-232)||(7415813-7415895)
chr7 (178-240)||(24060100-24060162)
chr7 (167-232)||(39389531-39389597)
chr7 (169-232)||(10199258-10199322)
chr7 (151-240)||(25834554-25834641)
chr7 (152-232)||(31283471-31283551)
chr7 (169-212)||(789161-789204)
chr7 (162-232)||(10040418-10040486)
chr7 (169-224)||(21766205-21766260)
chr7 (152-207)||(36609855-36609910)
chr7 (175-231)||(3433647-3433700)
chr7 (175-235)||(25750869-25750926)
chr7 (152-237)||(36251837-36251922)
chr7 (169-237)||(7629089-7629157)
chr7 (169-232)||(39434950-39435010)
chr7 (163-219)||(25489860-25489916)
chr7 (162-237)||(372650-372724)
chr7 (185-232)||(19397075-19397122)
chr7 (163-217)||(39434614-39434668)
chr7 (152-232)||(47297395-47297472)
chr7 (153-232)||(9412663-9412739)
chr7 (152-237)||(41556350-41556435)
chr7 (152-223)||(47901769-47901836)
chr7 (162-207)||(48103785-48103830)
chr7 (162-225)||(2475061-2475122)
chr7 (152-184)||(5318755-5318787)
chr7 (152-231)||(12170531-12170607)
chr7 (161-205)||(20034979-20035023)
chr7 (161-205)||(20045390-20045434)
chr7 (155-207)||(21094030-21094082)
chr7 (152-196)||(35446639-35446683)
chr7 (167-207)||(46622395-46622435)
chr7 (163-207)||(48525913-48525957)
[»] scaffold0287 (1 HSPs)
scaffold0287 (149-237)||(21985-22073)
[»] chr8 (34 HSPs)
chr8 (152-232)||(13765883-13765963)
chr8 (152-232)||(13755146-13755226)
chr8 (152-222)||(9694074-9694144)
chr8 (152-232)||(34966698-34966775)
chr8 (162-232)||(41666744-41666814)
chr8 (179-232)||(12542653-12542706)
chr8 (167-232)||(26536320-26536385)
chr8 (152-232)||(15919542-15919621)
chr8 (152-232)||(32856607-32856687)
chr8 (164-231)||(3369474-3369541)
chr8 (152-237)||(28205432-28205514)
chr8 (152-222)||(4535953-4536023)
chr8 (145-207)||(18638205-18638267)
chr8 (164-230)||(32173015-32173081)
chr8 (159-223)||(13170044-13170108)
chr8 (152-207)||(288768-288823)
chr8 (152-207)||(1554771-1554826)
chr8 (152-237)||(12191957-12192039)
chr8 (152-237)||(12436385-12436467)
chr8 (163-225)||(12838570-12838633)
chr8 (159-232)||(15226216-15226286)
chr8 (195-237)||(29039329-29039372)
chr8 (152-207)||(41942500-41942555)
chr8 (162-231)||(3739587-3739654)
chr8 (169-231)||(5182639-5182701)
chr8 (152-225)||(30264223-30264294)
chr8 (169-230)||(4418416-4418476)
chr8 (163-223)||(34180062-34180123)
chr8 (169-235)||(2692030-2692095)
chr8 (167-207)||(11352824-11352864)
chr8 (162-202)||(25722807-25722847)
chr8 (152-204)||(26784650-26784702)
chr8 (152-212)||(27020507-27020567)
chr8 (152-204)||(38498498-38498550)
[»] chr4 (44 HSPs)
chr4 (152-232)||(32006664-32006745)
chr4 (152-230)||(1397181-1397259)
chr4 (152-232)||(2133537-2133617)
chr4 (154-237)||(26088720-26088803)
chr4 (163-237)||(46620618-46620693)
chr4 (169-237)||(7059375-7059443)
chr4 (162-237)||(50561204-50561279)
chr4 (160-230)||(49319245-49319315)
chr4 (152-237)||(37013286-37013374)
chr4 (163-223)||(28494907-28494967)
chr4 (184-235)||(7396486-7396537)
chr4 (169-219)||(6488111-6488161)
chr4 (152-225)||(6196642-6196715)
chr4 (156-225)||(52954093-52954161)
chr4 (169-232)||(2548431-2548495)
chr4 (152-232)||(28808740-28808820)
chr4 (169-225)||(30503146-30503202)
chr4 (169-231)||(34409765-34409828)
chr4 (152-223)||(36802601-36802672)
chr4 (169-232)||(50821346-50821409)
chr4 (167-225)||(5881917-5881975)
chr4 (191-232)||(668262-668303)
chr4 (152-232)||(20702354-20702432)
chr4 (170-223)||(20818197-20818250)
chr4 (162-207)||(49574890-49574935)
chr4 (171-237)||(27376320-27376385)
chr4 (152-212)||(41169167-41169227)
chr4 (162-237)||(53451252-53451328)
chr4 (169-232)||(554717-554780)
chr4 (152-207)||(2358639-2358694)
chr4 (176-219)||(5101469-5101512)
chr4 (163-225)||(6386596-6386659)
chr4 (152-207)||(20702525-20702580)
chr4 (163-237)||(35034800-35034875)
chr4 (152-207)||(35447680-35447735)
chr4 (152-207)||(35595618-35595673)
chr4 (152-207)||(47931360-47931415)
chr4 (152-218)||(893897-893962)
chr4 (152-232)||(32023439-32023516)
chr4 (152-231)||(27088490-27088565)
chr4 (152-223)||(37143330-37143397)
chr4 (163-232)||(37143787-37143856)
chr4 (152-232)||(26510236-26510315)
chr4 (162-232)||(44182243-44182315)
[»] chr3 (58 HSPs)
chr3 (152-225)||(50098587-50098660)
chr3 (174-232)||(10438260-10438318)
chr3 (163-237)||(21495568-21495642)
chr3 (152-230)||(45644119-45644196)
chr3 (169-225)||(29535102-29535158)
chr3 (162-232)||(7791261-7791330)
chr3 (175-237)||(48795255-48795317)
chr3 (153-237)||(54982607-54982693)
chr3 (162-237)||(40360332-40360404)
chr3 (172-224)||(8757576-8757628)
chr3 (169-232)||(19224939-19225002)
chr3 (173-232)||(49429144-49429203)
chr3 (162-232)||(29542082-29542152)
chr3 (152-232)||(51006169-51006246)
chr3 (152-225)||(9862058-9862131)
chr3 (152-225)||(14418978-14419051)
chr3 (152-237)||(3418790-3418873)
chr3 (152-232)||(35380329-35380409)
chr3 (152-224)||(38809339-38809411)
chr3 (153-237)||(45885796-45885877)
chr3 (161-232)||(21789560-21789630)
chr3 (152-225)||(30102544-30102614)
chr3 (162-225)||(45879793-45879856)
chr3 (170-232)||(6834035-6834097)
chr3 (170-232)||(13875509-13875570)
chr3 (163-225)||(17438756-17438818)
chr3 (170-232)||(18020437-18020499)
chr3 (163-232)||(27400054-27400124)
chr3 (152-232)||(49429668-49429745)
chr3 (162-231)||(18956410-18956479)
chr3 (162-207)||(21030597-21030642)
chr3 (162-231)||(22130691-22130760)
chr3 (162-207)||(50099017-50099062)
chr3 (167-222)||(2513384-2513437)
chr3 (162-237)||(27398188-27398262)
chr3 (185-232)||(9151917-9151964)
chr3 (175-230)||(13043641-13043696)
chr3 (175-230)||(13051718-13051773)
chr3 (152-207)||(14899886-14899941)
chr3 (152-207)||(22102418-22102473)
chr3 (152-207)||(22177366-22177421)
chr3 (170-225)||(36920798-36920852)
chr3 (152-207)||(37431504-37431559)
chr3 (170-232)||(42401561-42401621)
chr3 (157-207)||(5812119-5812169)
chr3 (169-237)||(14265811-14265878)
chr3 (164-233)||(53162324-53162394)
chr3 (161-206)||(14266322-14266367)
chr3 (162-207)||(32509258-32509303)
chr3 (152-232)||(35938814-35938895)
chr3 (175-232)||(41923354-41923410)
chr3 (169-230)||(47787262-47787323)
chr3 (195-223)||(296306-296334)
chr3 (152-232)||(3890190-3890270)
chr3 (163-207)||(3899803-3899847)
chr3 (169-232)||(4577819-4577880)
chr3 (163-223)||(23251052-23251112)
chr3 (232-260)||(45885650-45885678)
[»] chr2 (46 HSPs)
chr2 (152-237)||(12069442-12069524)
chr2 (163-237)||(38702224-38702299)
chr2 (152-230)||(1071145-1071223)
chr2 (169-237)||(20579340-20579407)
chr2 (163-232)||(19063875-19063945)
chr2 (163-232)||(36080237-36080304)
chr2 (169-237)||(36205205-36205274)
chr2 (163-237)||(18072385-18072457)
chr2 (169-232)||(19064090-19064153)
chr2 (152-237)||(24100669-24100756)
chr2 (152-231)||(29241290-29241369)
chr2 (152-237)||(33676718-33676800)
chr2 (174-237)||(12069659-12069719)
chr2 (152-225)||(19813890-19813962)
chr2 (170-225)||(360348-360404)
chr2 (163-238)||(963247-963323)
chr2 (152-216)||(20625316-20625380)
chr2 (155-207)||(34063225-34063277)
chr2 (170-237)||(41122687-41122752)
chr2 (163-233)||(9415035-9415106)
chr2 (162-232)||(42949740-42949807)
chr2 (162-232)||(16039353-16039423)
chr2 (152-206)||(35125962-35126016)
chr2 (153-207)||(36341669-36341723)
chr2 (152-230)||(44857484-44857562)
chr2 (152-237)||(10553176-10553260)
chr2 (163-237)||(24004548-24004624)
chr2 (163-232)||(38692564-38692631)
chr2 (162-237)||(41384491-41384563)
chr2 (152-232)||(629614-629693)
chr2 (152-204)||(44020061-44020113)
chr2 (152-232)||(3357683-3357758)
chr2 (152-207)||(7603683-7603738)
chr2 (152-207)||(13836979-13837034)
chr2 (152-225)||(30977002-30977072)
chr2 (167-237)||(41014284-41014352)
chr2 (162-237)||(13450154-13450224)
chr2 (174-232)||(19133436-19133493)
chr2 (169-207)||(39271618-39271656)
chr2 (154-212)||(40301627-40301685)
chr2 (162-232)||(42185788-42185857)
chr2 (153-225)||(13594263-13594333)
chr2 (169-206)||(17372471-17372508)
chr2 (167-232)||(18746050-18746115)
chr2 (169-225)||(42060430-42060484)
chr2 (162-206)||(45407012-45407056)
[»] chr1 (53 HSPs)
chr1 (163-237)||(40808742-40808816)
chr1 (163-232)||(11408992-11409061)
chr1 (167-232)||(43415959-43416024)
chr1 (162-232)||(25298061-25298131)
chr1 (152-231)||(11344937-11345013)
chr1 (152-232)||(36605488-36605568)
chr1 (153-232)||(13315212-13315291)
chr1 (152-223)||(33326769-33326840)
chr1 (152-237)||(33474282-33474369)
chr1 (152-237)||(12267063-12267149)
chr1 (167-237)||(25822118-25822187)
chr1 (169-237)||(24561242-24561311)
chr1 (153-225)||(27927046-27927117)
chr1 (152-207)||(34969360-34969415)
chr1 (162-232)||(115873-115942)
chr1 (170-236)||(17579899-17579964)
chr1 (162-232)||(45943299-45943369)
chr1 (163-232)||(5965751-5965820)
chr1 (162-207)||(21335040-21335085)
chr1 (152-232)||(34748818-34748896)
chr1 (152-232)||(46880059-46880137)
chr1 (162-225)||(13303951-13304015)
chr1 (152-237)||(12301014-12301098)
chr1 (177-232)||(15470487-15470542)
chr1 (152-207)||(16424482-16424537)
chr1 (163-225)||(14386879-14386941)
chr1 (152-237)||(31845105-31845187)
chr1 (152-232)||(43575639-43575717)
chr1 (162-232)||(1531257-1531323)
chr1 (185-225)||(8209440-8209480)
chr1 (152-200)||(8574014-8574062)
chr1 (162-206)||(31528643-31528687)
chr1 (169-217)||(50943896-50943944)
chr1 (152-207)||(14746467-14746521)
chr1 (152-207)||(16823623-16823678)
chr1 (152-207)||(21343896-21343951)
chr1 (152-207)||(21348761-21348816)
chr1 (152-207)||(47576725-47576780)
chr1 (162-232)||(48715865-48715933)
chr1 (152-232)||(2666161-2666237)
chr1 (162-232)||(10844250-10844319)
chr1 (167-225)||(23773366-23773424)
chr1 (151-230)||(48668488-48668568)
chr1 (170-232)||(52397111-52397171)
chr1 (152-232)||(8096240-8096317)
chr1 (152-209)||(12264891-12264948)
chr1 (162-207)||(13315109-13315154)
chr1 (171-212)||(24005060-24005101)
chr1 (169-233)||(27904336-27904398)
chr1 (162-223)||(48419997-48420056)
chr1 (162-207)||(52043386-52043431)
chr1 (169-205)||(8699296-8699332)
chr1 (169-231)||(37706024-37706082)
[»] chr5 (43 HSPs)
chr5 (152-237)||(24836764-24836849)
chr5 (152-232)||(42918946-42919026)
chr5 (163-237)||(42207841-42207915)
chr5 (162-225)||(18526944-18527007)
chr5 (163-232)||(5769741-5769810)
chr5 (163-232)||(25781990-25782058)
chr5 (173-237)||(29403041-29403105)
chr5 (162-232)||(38696994-38697061)
chr5 (152-232)||(39850834-39850913)
chr5 (170-237)||(15341781-15341848)
chr5 (169-219)||(8990368-8990418)
chr5 (163-232)||(28340242-28340311)
chr5 (152-225)||(28766298-28766370)
chr5 (169-232)||(936139-936202)
chr5 (169-224)||(1611461-1611516)
chr5 (152-207)||(17210565-17210620)
chr5 (178-237)||(17704916-17704975)
chr5 (152-207)||(36226466-36226521)
chr5 (163-237)||(41862869-41862943)
chr5 (152-225)||(7464099-7464173)
chr5 (163-232)||(7649046-7649113)
chr5 (163-225)||(15232196-15232258)
chr5 (161-207)||(17064948-17064994)
chr5 (152-231)||(834195-834271)
chr5 (162-207)||(8786724-8786769)
chr5 (152-232)||(19128587-19128670)
chr5 (176-237)||(27832331-27832392)
chr5 (169-232)||(8839840-8839904)
chr5 (152-230)||(25754561-25754636)
chr5 (152-234)||(22702283-22702366)
chr5 (152-207)||(40493862-40493916)
chr5 (152-207)||(42516189-42516244)
chr5 (152-232)||(43370134-43370210)
chr5 (162-207)||(832191-832236)
chr5 (162-237)||(1611559-1611636)
chr5 (152-209)||(12659357-12659414)
chr5 (162-207)||(19650719-19650764)
chr5 (162-207)||(23206845-23206890)
chr5 (152-225)||(42027647-42027719)
chr5 (152-225)||(1611982-1612057)
chr5 (162-232)||(32234586-32234652)
chr5 (180-232)||(37896416-37896467)
chr5 (152-223)||(42097487-42097556)
[»] chr6 (28 HSPs)
chr6 (162-232)||(29350485-29350555)
chr6 (152-232)||(30591893-30591972)
chr6 (163-237)||(14662322-14662397)
chr6 (151-237)||(23124392-23124479)
chr6 (169-237)||(19146158-19146223)
chr6 (163-240)||(32333275-32333351)
chr6 (152-232)||(12169882-12169962)
chr6 (169-235)||(20715849-20715913)
chr6 (163-237)||(8771703-8771776)
chr6 (152-233)||(14426641-14426723)
chr6 (163-225)||(30233299-30233361)
chr6 (162-237)||(32531133-32531206)
chr6 (152-237)||(2485904-2485985)
chr6 (152-207)||(28712003-28712058)
chr6 (169-232)||(30254352-30254415)
chr6 (162-232)||(22535056-22535125)
chr6 (152-232)||(13629286-13629366)
chr6 (163-207)||(17353115-17353159)
chr6 (152-232)||(17942746-17942826)
chr6 (152-207)||(10460124-10460179)
chr6 (152-225)||(31861843-31861913)
chr6 (162-207)||(7451732-7451777)
chr6 (162-207)||(14965243-14965288)
chr6 (163-225)||(33573352-33573416)
chr6 (159-207)||(3833900-3833948)
chr6 (162-237)||(22535454-22535526)
chr6 (179-232)||(26251933-26251988)
chr6 (162-237)||(31204051-31204127)
[»] scaffold0024 (1 HSPs)
scaffold0024 (162-237)||(44259-44335)
[»] scaffold0268 (1 HSPs)
scaffold0268 (169-232)||(21608-21672)
[»] scaffold0649 (1 HSPs)
scaffold0649 (169-231)||(8428-8490)
[»] scaffold0830 (1 HSPs)
scaffold0830 (169-237)||(719-788)
[»] scaffold0734 (1 HSPs)
scaffold0734 (169-237)||(4028-4097)
[»] scaffold0118 (1 HSPs)
scaffold0118 (169-230)||(14765-14825)
[»] scaffold0021 (1 HSPs)
scaffold0021 (152-224)||(3981-4053)
[»] scaffold0137 (1 HSPs)
scaffold0137 (163-232)||(6922-6988)
[»] scaffold0037 (2 HSPs)
scaffold0037 (170-237)||(57109-57175)
scaffold0037 (170-237)||(64234-64300)
[»] scaffold0707 (1 HSPs)
scaffold0707 (163-225)||(376-440)
[»] scaffold0445 (1 HSPs)
scaffold0445 (162-207)||(4839-4884)
[»] scaffold0193 (1 HSPs)
scaffold0193 (164-232)||(21508-21577)
[»] scaffold0196 (1 HSPs)
scaffold0196 (162-237)||(8693-8765)


Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-116; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 234 - 481
Target Start/End: Complemental strand, 3530930 - 3530683
Alignment:
Q  234 ttattttctttatatataatatagataactgcatgttaattgtcttaaatgcagaaccaagttcaaattcatgcaagtcctacgtaatatatcacccatt 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3530930 ttattttctttatatataatatagataactgcatgttaattgtcttaaatgcagaaccaagttcaaattcaagcaagtcctacgtaatatatcacccatt 3530831  T
Q  334 aagtggacaatgtgtgaaagtgaatagtaacaatgaacttgaattgggtgattgtga-tgggcaaagtaagtggaatcaagaagggcaacaaatcaaatt 432  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||    
T  3530830 aagtggacaatgtgtgaaagtgaacactaacaatgaacttgaattgggtgattgtgagtgggcaa-gtaaatggaatcaagaagggcaacaaatcaaatt 3530732  T
Q  433 ggttggcaatggtagatacatagaagcagttagtgatggatcacaagtg 481  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3530731 ggttggcaatggtacatacatagaagcagttagtgatggatcacaagtg 3530683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 267 - 481
Target Start/End: Complemental strand, 3526863 - 3526649
Alignment:
Q  267 tgttaattgtcttaaatgcagaaccaagttcaaattcatgcaagtcctacgtaatatatcacccattaagtggacaatgtgtgaaagtgaatagtaacaa 366  Q
    |||||||| | |||| |||||| ||||||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||    
T  3526863 tgttaattttattaattgcagacccaagtttaaattcaagcaagtcctacataatatatcacccattaagtggacaatgtgtgaaagtgaacactaacaa 3526764  T
Q  367 tgaacttgaattgggtgattgtga-tgggcaaagtaagtggaatcaagaagggcaacaaatcaaattggttggcaatggtagatacatagaagcagttag 465  Q
    |||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  3526763 tgaacttgaattgggtgattgtgagtgggcaa-gtaaatggaatcaagaagggcaacaaatcaaattggttggcaatggtacatacatagaagcagttag 3526665  T
Q  466 tgatggatcacaagtg 481  Q
    ||||||||||||||||    
T  3526664 tgatggatcacaagtg 3526649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 270 - 481
Target Start/End: Complemental strand, 3548196 - 3547985
Alignment:
Q  270 taattgtcttaaatgcagaaccaagttcaaattcatgcaagtcctacgtaatatatcacccattaagtggacaatgtgtgaaagtgaatagtaacaatga 369  Q
    ||||| |||||| |||||||||||| ||||||||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3548196 taattttcttaattgcagaaccaagctcaaattcaagcaagtcctacataatatatcatccattaagtggacaatgtgtgaaagtgaatagtaacaatga 3548097  T
Q  370 acttgaattgggtgattgtga-tgggcaaagtaagtggaatcaagaagggcaacaaatcaaattggttggcaatggtagatacatagaagcagttagtga 468  Q
    ||||||||||||| ||||||| ||||||| |||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||  ||||||    
T  3548096 acttgaattgggtcattgtgagtgggcaa-gtaaatggaatcaagaagggcaacatatcaaattggttggcaatggtacatacatagaagcaaatagtga 3547998  T
Q  469 tggatcacaagtg 481  Q
    ||||||| |||||    
T  3547997 tggatcaaaagtg 3547985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 96 - 237
Target Start/End: Original strand, 3531040 - 3531181
Alignment:
Q  96 gtgtaacaaactcaatcttaatagaccaagatatatcaaaattttgttccttatttttatactctaaaacaaatttttctataataatgattgtcgttgg 195  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3531040 gtgtaacaaactcaatctttatagaccaagatatatcaaaattttgttccttatttttatactctgaaacaaatttttctataataatgattgtcgttgg 3531139  T
Q  196 tgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||||||||||||||||||||||||||| | |||||||||||    
T  3531140 tgtcattaaaaagataagaatttagatttttttttttgttat 3531181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 270 - 481
Target Start/End: Complemental strand, 3554412 - 3554201
Alignment:
Q  270 taattgtcttaaatgcagaaccaagttcaaattcatgcaagtcctacgtaatatatcacccattaagtggacaatgtgtgaaagtgaatagtaacaatga 369  Q
    ||||| ||| || |||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||| |||||||| |  |  ||| |    
T  3554412 taattttctaaattgcagaaccaagttcaaattcaagcaaatcctacataatatatcacccattaagtggacaatgtgtaaaagtgaacaaaaggaataa 3554313  T
Q  370 acttgaattgggtgattgtgatgggcaaagtaagtggaatcaagaagggcaacaaatcaaattggttggcaatggtagatacatagaagcagttagtgat 469  Q
    ||||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |  || |||||||||| |||  |||    
T  3554312 acttgtattgggtgattgtgatgggaaaagtaagtggaatcaagtagggcaacaaatcaaattggttggcaatgatgcatgcatagaagcaattaaagat 3554213  T
Q  470 ggatcacaagtg 481  Q
    ||||| ||||||    
T  3554212 ggatctcaagtg 3554201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 6854173 - 6854092
Alignment:
Q  152 ttatactctaaaacaaattttt-ctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||||||||||||| ||||| |||||||||||||||| |||||| | |||||||||||||||||||||||||| ||||||    
T  6854173 ttatactctaaaacaatttttttctataataatgattgttgttggtattattaaaaagataagaatttagattatatttttt 6854092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 15994153 - 15994070
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtg---tcattaaaaagataagaatttagattatctttttt 232  Q
    |||||||||||||||| |||| |||||||||||||||| |||||||   |||||||||||||||||||||||||||| ||||||    
T  15994153 ttatactctaaaacaatttttcctataataatgattgttgttggtggtgtcattaaaaagataagaatttagattatatttttt 15994070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 23653398 - 23653478
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| ||||||| |  ||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||    
T  23653398 ttatagtctaaaatatttttttttataataatgattgttgttggtgtcattaaaaagataaaaatttagattatatttttt 23653478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 41384000 - 41383937
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    |||||| ||||| ||||||||||||||| |||| |||||||| |||||||||||||||||||||    
T  41384000 aaacaactttttatataataatgattgttgttgatgtcattacaaagataagaatttagattat 41383937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 5800760 - 5800834
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    ||||| |||||||||||||| ||| || | |||| |||||||||| ||||||||||||||||| |||||||||||    
T  5800760 aacaattttttctataataaagatcgttggtggtatcattaaaaaaataagaatttagattattttttttgttat 5800834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 19371723 - 19371801
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| |||||||||||||| |||||| ||||||||||||||||  | ||||||||||||||| ||||||    
T  19371723 ttatacccttaaacaactttttctataataaagattgttgttggtgtcattaaaa--aaaagaatttagattatatttttt 19371801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 21028582 - 21028509
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||||| ||| |||| |||||| |||| ||||||||| | ||||||||||||||||||||||||| |||||||    
T  21028582 ttatactttaagacaactttttcaataacaatgattgttgctggtgtcattaaaaagataagaattcagattat 21028509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 21080247 - 21080194
Alignment:
Q  181 aatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgt 234  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| || |||||    
T  21080247 aatgattgttgttggtgtcattaaaaagataagaatttagattatattgtttgt 21080194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 39151799 - 39151871
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||||| |||||||||||||| |||||| |||||||| ||||||||   ||||||||||||||| |||||||||||    
T  39151799 aaacaactttttctataataaagattgttgttggtgttattaaaaa---aagaatttagattatattttttgttat 39151871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 45001017 - 45000937
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| |||||||||||||| |||||| |||| ||||| |||||| |||| |||||||||||| ||||||    
T  45001017 ttatacccttaaacaactttttctataataaagattgttgttgatgtcaataaaaaaataaaaatttagattatatttttt 45000937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 38175164 - 38175089
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcatt-aaaaagataagaatttagattatcttttttgttat 237  Q
    ||||| ||||||||||| |||||||||  ||||||||||| ||||| |||||||||||||||||  ||||||||||    
T  38175164 aacaactttttctataacaatgattgttcttggtgtcattcaaaaaaataagaatttagattataatttttgttat 38175089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 151 - 232
Target Start/End: Original strand, 7415813 - 7415895
Alignment:
Q  151 tttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaa-aagataagaatttagattatctttttt 232  Q
    ||||||| ||||||||| |||||||| ||||| |||||  ||||||||||||||| || ||||||||| ||||||| ||||||    
T  7415813 tttataccctaaaacaattttttctaaaataaagattgatgttggtgtcattaaacaaaataagaattcagattatatttttt 7415895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 24060162 - 24060100
Alignment:
Q  178 aataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatttt 240  Q
    |||||||||||| |||| |||||| ||||| ||||||||||| ||||| ||||||||||||||    
T  24060162 aataatgattgttgttgatgtcatcaaaaatataagaatttatattatattttttgttatttt 24060100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 39389531 - 39389597
Alignment:
Q  167 aatttttctataataatgattgtcgttggtgtcatt-aaaaagataagaatttagattatctttttt 232  Q
    |||||||||||||||| |||||| ||| |||||||| ||||| ||||||||||||||||| ||||||    
T  39389531 aatttttctataataaagattgttgtttgtgtcattaaaaaaaataagaatttagattatatttttt 39389597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 10199322 - 10199258
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcatt-aaaaagataagaatttagattatctttttt 232  Q
    |||||||||||||| |||||| ||||||||| || ||||| ||||||||||||||||| ||||||    
T  10199322 tttttctataataaagattgttgttggtgtcgttaaaaaaaataagaatttagattatatttttt 10199258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 240
Target Start/End: Original strand, 25834554 - 25834641
Alignment:
Q  151 tttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttatttt 240  Q
    ||||||| || |||||| |||| ||||||||| |||||| |||| ||||||||||||   |||||||||||||||  ||||||||||||||    
T  25834554 tttatacccttaaacaatttttcctataataaagattgttgttgatgtcattaaaaa---aagaatttagattatatttttttgttatttt 25834641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 31283551 - 31283471
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||| | |||||| |||||||||||||| |||||| |||||||||||||||||  ||  |||||||||| | ||||||    
T  31283551 ttatactattaaacaattttttctataataaagattgttgttggtgtcattaaaaaactacaaatttagattgtatttttt 31283471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 169 - 212
Target Start/End: Complemental strand, 789204 - 789161
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataa 212  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||    
T  789204 tttttttataataatgattgttgttggtgtcattaaaaagataa 789161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 10040418 - 10040486
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| |||||||||||||| |||||| ||||| ||||||||||  | ||||||||||||||| ||||||    
T  10040418 aaacaattttttctataataaagattgttgttggcgtcattaaaa--aaaagaatttagattatatttttt 10040486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 169 - 224
Target Start/End: Complemental strand, 21766260 - 21766205
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatta 224  Q
    ||||| |||||||| |||||| ||||||||||||| ||| ||||||||||||||||    
T  21766260 tttttttataataaagattgttgttggtgtcattataaaaataagaatttagatta 21766205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 36609910 - 36609855
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| |||||||||||||| |||||| |||||||||||||||||    
T  36609910 ttatacccttaaacaattttttctataataaagattgttgttggtgtcattaaaaa 36609855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 231
Target Start/End: Original strand, 3433647 - 3433700
Alignment:
Q  175 tataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttt 231  Q
    |||||||||||||||   ||||||||||| ||||||||||||||||||||| |||||    
T  3433647 tataataatgattgt---tggtgtcattacaaagataagaatttagattatattttt 3433700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 25750869 - 25750926
Alignment:
Q  175 tataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgtt 235  Q
    |||||||| |||||| |||||||||||||||||   ||||||||||||||| |||||||||    
T  25750869 tataataaagattgttgttggtgtcattaaaaa---aagaatttagattatattttttgtt 25750926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 36251837 - 36251922
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcatt-aaaaagataagaatttagattatcttttttgttat 237  Q
    |||||||||||| ||| |||||||||||||| |||||| ||| |||| ||| ||||| |||| |||||||||||| |||||| ||||    
T  36251837 ttatactctaaa-caattttttctataataaagattgttgtttgtgttattaaaaaaaataacaatttagattatattttttattat 36251922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 7629157 - 7629089
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaa-agataagaatttagattatcttttttgttat 237  Q
    |||||||||||||| |||||| |||||| | ||||||| | ||||||||||||||||| |||||||||||    
T  7629157 tttttctataataaagattgttgttggtattattaaaataaataagaatttagattat-ttttttgttat 7629089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 169 - 232
Target Start/End: Original strand, 39434950 - 39435010
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| |||||||| |||||| |||||||||||||||||   ||||||||||||||| ||||||    
T  39434950 tttttttataataaagattgttgttggtgtcattaaaaa---aagaatttagattatatttttt 39435010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 25489860 - 25489916
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaattta 219  Q
    ||||| |||||||||| |||  ||||| ||||||||||||||||| |||||||||||    
T  25489860 aacaactttttctatagtaaatattgttgttggtgtcattaaaaaaataagaattta 25489916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 372650 - 372724
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||||| |||||||||||| | |||||| |||| | |||||||||| | | ||||||||||||| |||||||||||    
T  372650 aaacaattttttctataatgaagattgttgttgatatcattaaaaa-aaatgaatttagattatattttttgttat 372724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 232
Target Start/End: Original strand, 19397075 - 19397122
Alignment:
Q  185 attgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| ||||||| ||||||||| ||||||||||||||||| ||||||    
T  19397075 attgttgttggtgccattaaaaaaataagaatttagattatatttttt 19397122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 39434668 - 39434614
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatt 217  Q
    ||||| |||||| ||||||| |||||| ||| ||||||||||||| |||||||||    
T  39434668 aacaactttttcaataataacgattgttgttagtgtcattaaaaaaataagaatt 39434614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 47297395 - 47297472
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||| |||||| ||||| |||||||| |||| | |||| ||||||||||||   ||||||||| ||||| ||||||    
T  47297395 ttatactcttaaacaattttttttataataaagatttttgttgatgtcattaaaaa---aagaatttaaattatatttttt 47297472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 9412663 - 9412739
Alignment:
Q  153 tatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| || |||||| |||||||||||||| |||||| ||| ||||| |||||||   |||||| |||||||| ||||||    
T  9412663 tatacccttaaacaattttttctataataaagattgttgttagtgtcgttaaaaa---aagaatatagattatatttttt 9412739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 237
Target Start/End: Complemental strand, 41556435 - 41556350
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||||| || |||||| |||| |||| |||  |||||| |||| ||||||| || | | ||||||||||||||| |||||||||||    
T  41556435 ttataccctcaaacaatttttcctattatagagattgttgttgatgtcattcaagaaaaaagaatttagattatattttttgttat 41556350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 47901769 - 47901836
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatt 223  Q
    |||||| || |||||| ||||| |||||||| |||||| |||||||||||||||||   |||||||||||||    
T  47901769 ttatacccttaaacaacttttt-tataataaagattgttgttggtgtcattaaaaa---aagaatttagatt 47901836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 48103830 - 48103785
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| |||||||||||||| |||||| ||| |||||||||||||    
T  48103830 aaacaactttttctataataaagattgttgttagtgtcattaaaaa 48103785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 2475122 - 2475061
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    |||||| |||||| ||||||| ||| || ||||||||||||||||  | |||||||||||||||    
T  2475122 aaacaattttttcaataataaagatcgttgttggtgtcattaaaa--aaaagaatttagattat 2475061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 184
Target Start/End: Original strand, 5318755 - 5318787
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatg 184  Q
    ||||||||| |||||||||||||||||||||||    
T  5318755 ttatactctgaaacaaatttttctataataatg 5318787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 231
Target Start/End: Original strand, 12170531 - 12170607
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttt 231  Q
    ||||||||| |||||| ||||||||||||||  ||||| |||||| || ||||||  | ||||||||||||||| |||||    
T  12170531 ttatactcttaaacaactttttctataataa-aattgttgttggtctcgttaaaa--aaaagaatttagattattttttt 12170607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 20034979 - 20035023
Alignment:
Q  161 aaaacaaatttttctataataatgattgtcgttggtgtcattaaa 205  Q
    ||||||| |||||||||||||| |||||| |||||| ||||||||    
T  20034979 aaaacaactttttctataataaagattgttgttggtttcattaaa 20035023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 20045390 - 20045434
Alignment:
Q  161 aaaacaaatttttctataataatgattgtcgttggtgtcattaaa 205  Q
    ||||||| |||||||||||||| |||||| |||||| ||||||||    
T  20045390 aaaacaactttttctataataaagattgttgttggtttcattaaa 20045434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 155 - 207
Target Start/End: Complemental strand, 21094082 - 21094030
Alignment:
Q  155 tactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| |||||| ||||| |||||||| |||||| ||| |||||||||||||    
T  21094082 tactcttaaacaactttttttataataaagattgttgttcgtgtcattaaaaa 21094030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 35446683 - 35446639
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggt 196  Q
    ||||||| | |||||| |||||||||||||| |||||||||||||    
T  35446683 ttatacttttaaacaattttttctataataaagattgtcgttggt 35446639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 46622435 - 46622395
Alignment:
Q  167 aatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||||| ||||||| |||||| |||||||||||||||||    
T  46622435 aatttttcgataataaagattgttgttggtgtcattaaaaa 46622395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 48525913 - 48525957
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||| |||||||||||||| |||||| ||||||||| |||||||    
T  48525913 aacaattttttctataataaagattgttgttggtgtcgttaaaaa 48525957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0287 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 21985 - 22073
Alignment:
Q  149 tttttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  21985 tttttatactctgaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatttttttttttgttat 22073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 13765883 - 13765963
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||    
T  13765883 ttatactctaaaacaattttttctataataatgattgttattggtgtcattaaaaagataagaatttagattatatttttt 13765963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 13755146 - 13755226
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||||| ||||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||||||||| | ||||||    
T  13755146 ttatactccaaaacaactttttcaataataatgattgttgtttgtgtcattaaaaagataagaatttagattttttttttt 13755226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 152 - 222
Target Start/End: Complemental strand, 9694144 - 9694074
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagat 222  Q
    ||||| ||| |||||| ||||||||||||||||||||| | || || ||||| ||||||||||||||||||    
T  9694144 ttatattcttaaacaactttttctataataatgattgttgatgatgacattacaaagataagaatttagat 9694074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 34966698 - 34966775
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| |||||||||||||| |||| | |||||||||||||||||   ||||||||||||||| ||||||    
T  34966698 ttatacccttaaacaactttttctataataaagatttttgttggtgtcattaaaaa---aagaatttagattatatttttt 34966775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 41666814 - 41666744
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| |||||||||||| | |||||| ||||||||||||||||| || |||||||| ||||| ||||||    
T  41666814 aaacaattttttctataattaagattgttgttggtgtcattaaaaaaattagaatttaaattatatttttt 41666744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 12542706 - 12542653
Alignment:
Q  179 ataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||||| |||| |||||||| ||||||||||||||||||||| ||||||    
T  12542706 ataatgattgttgttgatgtcattacaaagataagaatttagattatatttttt 12542653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 26536385 - 26536320
Alignment:
Q  167 aatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||||||||||||| |||||| ||||||||||||||||| |||| || |||| |||| ||||||    
T  26536385 aatttttctataataaagattgttgttggtgtcattaaaaaaataacaacttagtttatatttttt 26536320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 15919621 - 15919542
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| ||| |||||||||| || ||| ||||||||||||||||| | ||||||||||||||| ||||||    
T  15919621 ttatacccttaaacaactttctctataataaagaatgttgttggtgtcattaaaaa-aaaagaatttagattatatttttt 15919542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 32856687 - 32856607
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| |||||||||||||| |||||| | |||||| | |||||| ||||||||||||||| | ||||||    
T  32856687 ttatacccttaaacaactttttctataataaagattgttgatggtgttaataaaaaaataagaatttagattttatttttt 32856607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 164 - 231
Target Start/End: Complemental strand, 3369541 - 3369474
Alignment:
Q  164 acaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttt 231  Q
    |||| |||||||||||||| |||||| |||| ||| |||| ||| ||||||||||||||||| |||||    
T  3369541 acaactttttctataataaagattgttgttgttgttattataaaaataagaatttagattatattttt 3369474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 28205432 - 28205514
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    ||||||| ||||||||  ||||||||||||| |||||| |||| ||||||||||||   |||||||| |||| | |||||||||||    
T  28205432 ttatactttaaaacaatattttctataataaagattgttgttgatgtcattaaaaa---aagaatttggatttttttttttgttat 28205514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 222
Target Start/End: Original strand, 4535953 - 4536023
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagat 222  Q
    |||||| || |||||| ||||||||| ||||  ||||| || |||||||||||||| ||||||||||||||    
T  4535953 ttatacccttaaacaactttttctatgataaaaattgttgtcggtgtcattaaaaaaataagaatttagat 4536023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 207
Target Start/End: Original strand, 18638205 - 18638267
Alignment:
Q  145 cttatttttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||| |||||||| || |||||| |||||||||||||| |||||| |||| ||||||||||||    
T  18638205 cttagttttatacccttaaacaattttttctataataaagattgttgttgatgtcattaaaaa 18638267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 32173015 - 32173081
Alignment:
Q  164 acaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttt 230  Q
    |||| |||||||||||||| ||| || ||||| ||||||||||| || |||||||||||||| ||||    
T  32173015 acaattttttctataataaagatcgttgttggcgtcattaaaaaaattagaatttagattatatttt 32173081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 13170044 - 13170108
Alignment:
Q  159 ctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatt 223  Q
    ||||||||| ||||||| ||||||||| ||| ||| ||||  ||||||| |||||||||||||||    
T  13170044 ctaaaacaactttttctttaataatgactgttgtttgtgttgttaaaaatataagaatttagatt 13170108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 288768 - 288823
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||||||| ||| || |||||||||||||| |||||| || ||||||||||||||    
T  288768 ttatactcttaaaaaactttttctataataaagattgttgtcggtgtcattaaaaa 288823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 1554771 - 1554826
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || ||| || |||||||||||||| |||||| |||||||||||||||||    
T  1554771 ttatacccttaaataactttttctataataaagattgttgttggtgtcattaaaaa 1554826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 237
Target Start/End: Complemental strand, 12192039 - 12191957
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||||| || |||||| ||||| |||||||| |||||| |||| |||||| ||||| |   ||||||||||||| |||||||||||    
T  12192039 ttatacccttaaacaattttttttataataaggattgttgttgatgtcatcaaaaata---gaatttagattatattttttgttat 12191957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 237
Target Start/End: Complemental strand, 12436467 - 12436385
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||||| || |||||| ||||| |||||||| |||||| |||| |||||| ||||| |   ||||||||||||| |||||||||||    
T  12436467 ttatacccttaaacaattttttttataataaggattgttgttgatgtcatcaaaaata---gaatttagattatattttttgttat 12436385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 12838570 - 12838633
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaa-aaagataagaatttagattat 225  Q
    ||||| |||||||||||||| |||||| ||||| |||||||| |||  ||||||||||||||||    
T  12838570 aacaactttttctataataaagattgttgttggcgtcattaataaaagtaagaatttagattat 12838633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 15226286 - 15226216
Alignment:
Q  159 ctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||| |||||||||||||   ||||| |||||| ||| |||||||||| ||||||| ||||| ||||||    
T  15226286 ctaaaacaactttttctataata---attgttgttggtctcaataaaaagatatgaatttatattatatttttt 15226216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 29039372 - 29039329
Alignment:
Q  195 gtgtcattaaaaagataagaatttagattat-cttttttgttat 237  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||    
T  29039372 gtgtcattaaaaaaataagaatttagattatacttttttgttat 29039329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 41942555 - 41942500
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| |||||||||||||| |||||| || ||||||||||||||    
T  41942555 ttatacccttaaacaactttttctataataaagattgttgtgggtgtcattaaaaa 41942500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 3739587 - 3739654
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttt 231  Q
    |||||| |||||||||||||| | |||| ||||||||||||||||| ||  ||||||| ||||| |||||    
T  3739587 aaacaactttttctataataaaggttgttgttggtgtcattaaaaaaat--gaatttaaattatattttt 3739654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 5182701 - 5182639
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttt 231  Q
    |||||||||||||| |||| | ||||||||||||||||| | |||||||| ||| || |||||    
T  5182701 tttttctataataaagattattgttggtgtcattaaaaacaaaagaatttcgataatattttt 5182639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 30264294 - 30264223
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||||||| |||||| ||||| ||||| || |||||| || |||||||||||||| ||  |||||||||||||    
T  30264294 ttatactcttaaacaactttttatataaaaaagattgttgtcggtgtcattaaaaaaat--gaatttagattat 30264223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 4418416 - 4418476
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttt 230  Q
    |||||||||||||| |||||| |||| |||||||||||| | || |||||||||||| ||||    
T  4418416 tttttctataataaagattgttgttgatgtcattaaaaa-agaaaaatttagattatatttt 4418476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 34180062 - 34180123
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcatt-aaaaagataagaatttagatt 223  Q
    ||||| |||||||||||||| |||||| ||| |||| ||| ||||| |||||||||||||||    
T  34180062 aacaactttttctataataaagattgttgttagtgttattaaaaaaaataagaatttagatt 34180123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 235
Target Start/End: Complemental strand, 2692095 - 2692030
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgtt 235  Q
    ||||| |||||||| |||||| |||||||||||| |||  |||| |||||||||||| ||||||||||    
T  2692095 tttttttataataaagattgttgttggtgtcattcaaa--ataataatttagattatacttttttgtt 2692030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 11352824 - 11352864
Alignment:
Q  167 aatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||||||||||| ||||||||| |||||| ||||||||||    
T  11352824 aatttttctataacaatgattgttgttggtttcattaaaaa 11352864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 202
Target Start/End: Original strand, 25722807 - 25722847
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcatt 202  Q
    |||||| |||||||||||||| |||||| ||||||||||||    
T  25722807 aaacaactttttctataataaagattgttgttggtgtcatt 25722847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 26784650 - 26784702
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaa 204  Q
    |||||| || |||||| |||||||||||||| |||||| || |||||||||||    
T  26784650 ttatacccttaaacaactttttctataataaagattgttgtcggtgtcattaa 26784702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 27020567 - 27020507
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataa 212  Q
    |||||| || |||||| |||||||| ||||| ||| || ||||||||||||||||| ||||    
T  27020567 ttatacccttaaacaactttttctacaataaagatcgttgttggtgtcattaaaaaaataa 27020507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 38498498 - 38498550
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaa 204  Q
    |||||| || |||||| |||||||| ||||| |||||| ||||||||||||||    
T  38498498 ttatacccttaaacaactttttctacaataaagattgttgttggtgtcattaa 38498550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 8e-22; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 32006745 - 32006664
Alignment:
Q  152 ttatactctaaaacaaattttt-ctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||| |||||| ||||| ||||||    
T  32006745 ttatactctaaaacaatttttttctataataatgattgttgttggtgtcattaaaaagataaaaatttatattatatttttt 32006664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 152 - 230
Target Start/End: Original strand, 1397181 - 1397259
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttt 230  Q
    |||||| || |||||| |||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||    
T  1397181 ttatacccttaaacaagtttttcaataataaagattgtcgttggtgtcattaaaaaaataagaatttagattatatttt 1397259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 2133537 - 2133617
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||| |||||| |||||||||||||| |||||| ||||||||| |||||||  |||||||||||||||| ||||||    
T  2133537 ttatactcttaaacaattttttctataataaagattgttgttggtgtcgttaaaaaattaagaatttagattatgtttttt 2133617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 154 - 237
Target Start/End: Original strand, 26088720 - 26088803
Alignment:
Q  154 atactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||| ||||| ||| ||||||||||||||||||||| |||| ||||||||||| ||||||||||| |||||| |||||| ||||    
T  26088720 ataccctaaagcaattttttctataataatgattgttgttgttgtcattaaaaggataagaattttgattatattttttattat 26088803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 46620693 - 46620618
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatct-tttttgttat 237  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||| | ||||||||||    
T  46620693 aacaactttttctataataaagattgttgttggtgtcattaaaaaaataagaatttagattatatatttttgttat 46620618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 7059375 - 7059443
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    ||||| |||||||| |||||| ||||||||| ||||||| ||||||||||||||||| |||||||||||    
T  7059375 tttttttataataaagattgttgttggtgtcgttaaaaaaataagaatttagattatattttttgttat 7059443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 50561279 - 50561204
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||||| ||||||||||||||  ||||| ||||||||||||||||| ||| ||||||| ||||| |||||||||||    
T  50561279 aaacaattttttctataataaaaattgttgttggtgtcattaaaaaaatatgaatttaaattatattttttgttat 50561204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 49319315 - 49319245
Alignment:
Q  160 taaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttt 230  Q
    |||||||| ||||| ||||||||| | ||| ||||||||| ||||||||||||||||||||||||| ||||    
T  49319315 taaaacaactttttatataataataaatgttgttggtgtcgttaaaaagataagaatttagattatatttt 49319245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 152 - 237
Target Start/End: Complemental strand, 37013374 - 37013286
Alignment:
Q  152 ttatactctaaaacaaattttt-ctataataatgattgtcgttggtgtcattaaaaagataagaatttagat--tatcttttttgttat 237  Q
    ||||||| |||||||| ||||| |||||||||||||||| ||||| || || ||||||||||||||||||||  ||| |||||||||||    
T  37013374 ttatactataaaacaatttttttctataataatgattgttgttggcgttatcaaaaagataagaatttagattgtatattttttgttat 37013286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 163 - 223
Target Start/End: Original strand, 28494907 - 28494967
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatt 223  Q
    ||||| |||||||||||||| |||||| |||||||| |||||||| |||||||||||||||    
T  28494907 aacaactttttctataataaagattgttgttggtgtgattaaaaaaataagaatttagatt 28494967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 184 - 235
Target Start/End: Original strand, 7396486 - 7396537
Alignment:
Q  184 gattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgtt 235  Q
    |||||| ||| ||||||||||||||||||||||||||||||| |||||||||    
T  7396486 gattgttgtttgtgtcattaaaaagataagaatttagattatattttttgtt 7396537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 6488111 - 6488161
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaattta 219  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||||||||||    
T  6488111 tttttttataataatgattgttgttggtgtcattaaaaatataagaattta 6488161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 6196642 - 6196715
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    |||||| || |||||| ||||| |||||||| |||||| |||||||||||||||||  |||||||||| |||||    
T  6196642 ttatacccttaaacaactttttgtataataaagattgttgttggtgtcattaaaaaagtaagaatttaaattat 6196715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 52954093 - 52954161
Alignment:
Q  156 actctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||| |||||| |||||||||||||| |||||| ||||||||||||||||| | ||||||||| |||||    
T  52954093 actcttaaacaactttttctataataaagattgttgttggtgtcattaaaaa-aaaagaatttatattat 52954161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 232
Target Start/End: Original strand, 2548431 - 2548495
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtca-ttaaaaagataagaatttagattatctttttt 232  Q
    |||||||||||||| |||||| |||||||||| ||||||| |||| |||||||||||| ||||||    
T  2548431 tttttctataataaagattgttgttggtgtcatttaaaaaaataataatttagattatatttttt 2548495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 28808740 - 28808820
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| ||| |||||| ||||||||||||||| ||||| |||| |||  ||||| ||||||||||||| ||||| ||||||    
T  28808740 ttatattcttaaacaactttttctataataataattgttgttgatgttgttaaagagataagaatttatattatatttttt 28808820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 30503146 - 30503202
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||| |||||||| |||||| ||||||||||||| ||| |||||||||||||||||    
T  30503146 tttttttataataaagattgttgttggtgtcattacaaaaataagaatttagattat 30503202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 34409828 - 34409765
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcatta-aaaagataagaatttagattatcttttt 231  Q
    |||||||||||||| |||||| | ||||||||||| |||| ||||||||||||||||| |||||    
T  34409828 tttttctataataaagattgttgctggtgtcattaaaaaaaataagaatttagattatattttt 34409765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 36802672 - 36802601
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatt 223  Q
    ||||| ||| |||||| ||| |||||||||| |||||| ||||||||||||||||| |||  ||||||||||    
T  36802672 ttataatcttaaacaactttgtctataataaagattgttgttggtgtcattaaaaaaatagtaatttagatt 36802601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 50821409 - 50821346
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||||||||||| |||||| | | ||||| ||||||| ||||||||||||||||| ||||||    
T  50821409 tttttctataataaagattgttgcttgtgtctttaaaaatataagaatttagattatatttttt 50821346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 225
Target Start/End: Original strand, 5881917 - 5881975
Alignment:
Q  167 aatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    |||||||||||||||| ||||||  ||| ||||||||||||||||| |||||| |||||    
T  5881917 aatttttctataataaagattgttattgatgtcattaaaaagataaaaatttatattat 5881975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 191 - 232
Target Start/End: Original strand, 668262 - 668303
Alignment:
Q  191 gttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||||||||||| ||||||||||||||||| ||||||    
T  668262 gttggtgtcattaaaaaaataagaatttagattatatttttt 668303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 20702354 - 20702432
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| |||||||||||||| ||| || |||||||||||| |||  | ||||||||||||||| ||||||    
T  20702354 ttatacccttaaacaactttttctataataaagatcgttgttggtgtcattgaaa--aaaagaatttagattatatttttt 20702432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 20818250 - 20818197
Alignment:
Q  170 ttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatt 223  Q
    |||| |||||||| |||||| |||| |||||||||||| |||||||||||||||    
T  20818250 ttttttataataaagattgttgttgatgtcattaaaaaaataagaatttagatt 20818197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 49574890 - 49574935
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||||||||||||||||||| ||| || |||||||||||||||||    
T  49574890 aaacaaatttttctataataaagatcgttgttggtgtcattaaaaa 49574935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 27376385 - 27376320
Alignment:
Q  171 tttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttat 237  Q
    |||||||||||| |||||| ||||||||||||||||  | |||||||||||||||  |||||||||||    
T  27376385 tttctataataaagattgttgttggtgtcattaaaa--aaaagaatttagattataattttttgttat 27376320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 212
Target Start/End: Original strand, 41169167 - 41169227
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataa 212  Q
    |||||| || |||||| |||||||||||||| |||||| ||||||||| ||||||| ||||    
T  41169167 ttatacccttaaacaactttttctataataaagattgttgttggtgtcgttaaaaaaataa 41169227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 53451252 - 53451328
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatct-tttttgttat 237  Q
    ||||||||||||| ||||||| || ||| | ||||||||||||||  | ||||||||||||||| | ||||||||||    
T  53451252 aaacaaatttttccataataaagaatgttgctggtgtcattaaaagaaaaagaatttagattatatatttttgttat 53451328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 554780 - 554717
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||||| ||||| |||||  |||| |||||||||||| ||||||||||| ||||| ||||||    
T  554780 tttttctagaataaagattggtgttgatgtcattaaaaaaataagaatttaaattatatttttt 554717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 2358639 - 2358694
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| ||||||||||||||  ||||| |||||||||||||||||    
T  2358639 ttatacccttaaacaactttttctataataaaaattgttgttggtgtcattaaaaa 2358694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 5101469 - 5101512
Alignment:
Q  176 ataataatgattgtcgttggtgtcattaaaaagataagaattta 219  Q
    |||||||| ||||| |||||||| ||||||||||||||||||||    
T  5101469 ataataataattgttgttggtgtgattaaaaagataagaattta 5101512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 6386596 - 6386659
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaa-aaagataagaatttagattat 225  Q
    ||||||||| ||||||||||  ||||| |||| ||||||||| ||| |||||||||||||||||    
T  6386596 aacaaatttgtctataataaaaattgttgttgatgtcattaagaaaaataagaatttagattat 6386659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 20702525 - 20702580
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| |||||||||||||| ||| || |||||||||||||||||    
T  20702525 ttatacccttaaacaactttttctataataaagatcgttgttggtgtcattaaaaa 20702580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 35034875 - 35034800
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcatt-aaaaagataagaatttagattatcttttttgttat 237  Q
    ||||| ||||| |||||||| |||||| |||| ||||||| ||||| | ||||||||||||||| |||||| ||||    
T  35034875 aacaactttttttataataaagattgttgttgttgtcattgaaaaaaaaaagaatttagattatattttttcttat 35034800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 35447735 - 35447680
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || ||| || |||||||||||||| |||||| |||||||||||||||||    
T  35447735 ttatacccttaaataactttttctataataaagattgttgttggtgtcattaaaaa 35447680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 35595673 - 35595618
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||||||| |||||  |||||||||||||| |||||| ||| |||||||||||||    
T  35595673 ttatactcttaaacagttttttctataataaagattgttgttagtgtcattaaaaa 35595618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 47931415 - 47931360
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| ||||| |||||||| |||||| |||||||||||||||||    
T  47931415 ttatacccttaaacaactttttatataataaagattgttgttggtgtcattaaaaa 47931360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 218
Target Start/End: Original strand, 893897 - 893962
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaattt 218  Q
    |||||| || |||||| ||||| ||||||||| ||||| |||| |||||||||||| ||||||||||    
T  893897 ttataccctgaaacaattttttgtataataat-attgttgttgatgtcattaaaaaaataagaattt 893962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 32023439 - 32023516
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||| |||||| ||||| |||||||| |||||| | || ||||||||| ||   ||||||||||||||| ||||||    
T  32023439 ttatactcttaaacaactttttttataataaagattgttgctgatgtcattaacaa---aagaatttagattatatttttt 32023516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 231
Target Start/End: Original strand, 27088490 - 27088565
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttt 231  Q
    |||||| || ||||||  |||||||||||||  ||||| |||||||||||||||||   ||||||||||||||| |||||    
T  27088490 ttatacccttaaacaatcttttctataataaa-attgttgttggtgtcattaaaaa---aagaatttagattatattttt 27088565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 37143397 - 37143330
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatt 223  Q
    |||||| || |||||| ||||||||||||||  ||||| |||||||||||||||||   |||||||||||||    
T  37143397 ttatacccttaaacaactttttctataataaa-attgttgttggtgtcattaaaaa---aagaatttagatt 37143330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 37143856 - 37143787
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| ||||| |||||||  |||||| | ||||||||||||||| ||||| |||||| |||| ||||||    
T  37143856 aacaactttttttataatagagattgttgatggtgtcattaaaaaaataagcatttaggttatatttttt 37143787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 26510315 - 26510236
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||| ||| || |||||| ||||||| |||  |  |||||| ||||||||| ||||||||||||||||| ||||||    
T  26510315 ttatactcttaaataactttttccataataaagatatttcttggtgacattaaaaa-ataagaatttagattatatttttt 26510236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 44182315 - 44182243
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcatt-aaaaagataa-gaatttagattatctttttt 232  Q
    |||||| |||||||||||||| |||||||  |||||||||| ||||||| || ||||||| ||||| ||||||    
T  44182315 aaacaattttttctataataaagattgtccgtggtgtcattgaaaaagaaaacgaatttaaattatatttttt 44182243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 8e-22; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 50098660 - 50098587
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||||| |||||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  50098660 ttatactttaaaacaattttttctataataatgattgtcgttgatgtcgctaaaaagataagaatttagattat 50098587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 10438260 - 10438318
Alignment:
Q  174 ctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||    
T  10438260 ctataataatgattgttgttggtgtcattaaaaagataagaatttatattatatttttt 10438318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 21495568 - 21495642
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    ||||| |||||||||||||| |||||| |||||||||| |||| | ||||||||||||||||| |||||||||||    
T  21495568 aacaactttttctataataaagattgttgttggtgtcagtaaacaaataagaatttagattatattttttgttat 21495642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 152 - 230
Target Start/End: Original strand, 45644119 - 45644196
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttt 230  Q
    |||||| || |||||| |||||||||||||| |||||||||||||||||||||||| |||| |||||||||||| ||||    
T  45644119 ttatacccttaaacaactttttctataataaagattgtcgttggtgtcattaaaaa-ataataatttagattatatttt 45644196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 169 - 225
Target Start/End: Original strand, 29535102 - 29535158
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||    
T  29535102 tttttctatgataatgattgttgttgatgtcattaaaaagataagaatttagattat 29535158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 7791330 - 7791261
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| ||||||||||||||  ||||| ||||||||||||||||| ||||||||||||||||| ||||||    
T  7791330 aaacaattttttctataataaatattgttgttggtgtcattaaaaa-ataagaatttagattatatttttt 7791261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 48795255 - 48795317
Alignment:
Q  175 tataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    ||||||||||||||| |||| |||||||||||||||||||||||| ||||| |||||| ||||    
T  48795255 tataataatgattgttgttgatgtcattaaaaagataagaatttatattatattttttattat 48795317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 54982607 - 54982693
Alignment:
Q  153 tatactctaaaacaaatttttct-ataataatgattgtcgttggtgtcattaaaaagataagaatttagattatct-tttttgttat 237  Q
    |||||||||||| || ||||| | |||||||||||||| ||||||||||||||||||||| ||||||| ||||| | ||||||||||    
T  54982607 tatactctaaaataatttttttttataataatgattgttgttggtgtcattaaaaagataggaatttaaattatatgtttttgttat 54982693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 40360332 - 40360404
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||||| |||||||||||||| |||||| |||||||||||||||||   ||||||||||||||| |||||| ||||    
T  40360332 aaacaattttttctataataaagattgttgttggtgtcattaaaaa---aagaatttagattatatttttttttat 40360404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 172 - 224
Target Start/End: Complemental strand, 8757628 - 8757576
Alignment:
Q  172 ttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatta 224  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||| ||||    
T  8757628 ttctataaaaataattgtcgttggtgtcattaaaaagataagaatttaaatta 8757576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 169 - 232
Target Start/End: Original strand, 19224939 - 19225002
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||||||||||||| ||||| |||||||| |||| || |||||||||||||| ||||||    
T  19224939 tttttctataataatgattatcgttagtgtcattgaaaaaattagaatttagattatatttttt 19225002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 49429203 - 49429144
Alignment:
Q  173 tctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||||||| |||||| |||||||||||||||||  |||||||||||||||| ||||||    
T  49429203 tctataataaagattgttgttggtgtcattaaaaaattaagaatttagattatatttttt 49429144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 29542152 - 29542082
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| |||||||||||||| |||||| |||  |||||||||||| ||||||||||| ||||| ||||||    
T  29542152 aaacaactttttctataataaagattgttgtttatgtcattaaaaaaataagaatttatattatatttttt 29542082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 51006169 - 51006246
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||| ||| || |||||||||||||| |||||| ||||||||| |||||||   ||||||||||||||| ||||||    
T  51006169 ttatactcttaaataattttttctataataaagattgttgttggtgtcgttaaaaa---aagaatttagattatatttttt 51006246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 9862058 - 9862131
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    |||||||||||||||| ||||||||| | |||| |||| ||||  |||| ||||| ||||||||||||||||||    
T  9862058 ttatactctaaaacaactttttctattacaatggttgttgttgtcgtcactaaaatgataagaatttagattat 9862131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 14418978 - 14419051
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    |||||| || |||||| |||||||||||||| |||||| |||| |||||||||||| |||| |||||| |||||    
T  14418978 ttatacccttaaacaattttttctataataaagattgttgttgatgtcattaaaaaaataaaaatttatattat 14419051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 3418790 - 3418873
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctt-ttttgttat 237  Q
    |||||| || |||||| |||||||||||||| |||||| |||||| ||||||||||   ||||||||||||||| || |||||||||    
T  3418790 ttatacccttaaacaactttttctataataaagattgttgttggtatcattaaaaa---aagaatttagattatattcttttgttat 3418873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 35380329 - 35380409
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| |||||||||| ||| |||||| ||| ||||||||||||| || |||||| ||||||| ||||||    
T  35380329 ttatacccttaaacaattttttctatagtaaagattgttgttagtgtcattaaaaaaattagaattaagattatatttttt 35380409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 38809411 - 38809339
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatta 224  Q
    |||||| || |||||| |||||| ||||||| |||||| ||| |||||||| |||| ||||||||||||||||    
T  38809411 ttatacccttaaacaactttttcaataataaagattgttgtttgtgtcatttaaaaaataagaatttagatta 38809339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 45885796 - 45885877
Alignment:
Q  153 tatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttt-tttgttat 237  Q
    ||||| || |||||| |||||||||||||| |||||| ||||||||||||||||    ||||||||||||||| ||| ||||||||    
T  45885796 tatacccttaaacaattttttctataataaagattgttgttggtgtcattaaaa----aagaatttagattatatttatttgttat 45885877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 161 - 232
Target Start/End: Complemental strand, 21789630 - 21789560
Alignment:
Q  161 aaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||| || ||||||||||| |||| | ||||||||||||||||| ||||||||||||||| | ||||||    
T  21789630 aaaacaacttattctataataaagatttttgttggtgtcattaaaaa-ataagaatttagattttttttttt 21789560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 30102614 - 30102544
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    |||||| || |||||| |||||||||||||| ||| || |||||||||||||||||   |||||||||||||||    
T  30102614 ttatacccttaaacaactttttctataataaagatcgttgttggtgtcattaaaaa---aagaatttagattat 30102544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 45879793 - 45879856
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    |||||| ||||||||||||||  |||||  |||||||||||||||| | |||||||||||||||    
T  45879793 aaacaactttttctataataaaaattgttattggtgtcattaaaaaaaaaagaatttagattat 45879856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 6834035 - 6834097
Alignment:
Q  170 ttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| |||||||||||||| |||| ||| |||||||| |||||| |||||||||| ||||||    
T  6834035 ttttcaataataatgattgttgttgttgttattaaaaaaataagagtttagattatatttttt 6834097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 13875509 - 13875570
Alignment:
Q  170 ttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||||||||||  ||||| ||||||||||||||||| | ||||||||||||||| ||||||    
T  13875509 ttttctataataaa-attgttgttggtgtcattaaaaaaaaaagaatttagattatatttttt 13875570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 17438818 - 17438756
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||| ||||| | |||||| ||||||  |||||||||||||||||||| |||||||||||||    
T  17438818 aacaactttttttctaataaagattgttattggtgtcattaaaaagataggaatttagattat 17438756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 18020437 - 18020499
Alignment:
Q  170 ttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| ||||||| |||||||||| | ||||||||||| |||||||||| |||||| ||||||    
T  18020437 ttttccataataaagattgtcgttagggtcattaaaaaaataagaatttggattatatttttt 18020499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 27400124 - 27400054
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaa-aagataagaatttagattatctttttt 232  Q
    ||||| ||||||||| |||| || ||| ||||||||||||||| || ||||||||||||||||| ||||||    
T  27400124 aacaactttttctatcataaagaatgttgttggtgtcattaaataaaataagaatttagattatatttttt 27400054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 49429745 - 49429668
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| |||||||||||||| ||||||   ||||||||||||||| |  |||||||||||||| ||||||    
T  49429745 ttatacccttaaacaactttttctataataaagattgt---tggtgtcattaaaaaaaatagaatttagattatatttttt 49429668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 162 - 231
Target Start/End: Original strand, 18956410 - 18956479
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttt 231  Q
    |||||| |||||||||| || ||||||| ||||  ||||||| ||||||||| ||||||||||| |||||    
T  18956410 aaacaactttttctatagtagtgattgttgttgaggtcattacaaagataaggatttagattatattttt 18956479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 21030642 - 21030597
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| |||||||||||||| |||||| |||||||||||||||||    
T  21030642 aaacaactttttctataataaagattgttgttggtgtcattaaaaa 21030597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 162 - 231
Target Start/End: Complemental strand, 22130760 - 22130691
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttt 231  Q
    |||||| |||||||||| |||| ||| | |||| |||||||| ||||||||| ||||||||||| |||||    
T  22130760 aaacaactttttctatagtaattatttttgttgatgtcattacaaagataaggatttagattatattttt 22130691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 50099017 - 50099062
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| |||||||||||||| |||||| |||||||||||||||||    
T  50099017 aaacaactttttctataataaagattgttgttggtgtcattaaaaa 50099062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 222
Target Start/End: Complemental strand, 2513437 - 2513384
Alignment:
Q  167 aatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagat 222  Q
    ||||||||||||||||||||||| |||  | |||||| ||||||||||||||||||    
T  2513437 aatttttctataataatgattgttgtt--tatcattacaaagataagaatttagat 2513384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 27398188 - 27398262
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcatt-aaaaagataagaatttagattatcttttttgttat 237  Q
    |||||||||||||||||||||  |||||  ||||||||||| ||||| ||||||||||||||| | |||||||||||    
T  27398188 aaacaaatttttctataataa-cattgttattggtgtcattaaaaaaaataagaatttagatt-ttttttttgttat 27398262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 185 - 232
Target Start/End: Complemental strand, 9151964 - 9151917
Alignment:
Q  185 attgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| ||||||||||||||||| |||| |||||||||||| ||||||    
T  9151964 attgttgttggtgtcattaaaaaaataaaaatttagattatatttttt 9151917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 13043696 - 13043641
Alignment:
Q  175 tataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttt 230  Q
    |||||||| |||| | |||||||||||| |||| ||||||||||||||||| ||||    
T  13043696 tataataaagatttttgttggtgtcatttaaaaaataagaatttagattatatttt 13043641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 13051773 - 13051718
Alignment:
Q  175 tataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttt 230  Q
    |||||||| |||| | |||||||||||| |||| ||||||||||||||||| ||||    
T  13051773 tataataaagatttttgttggtgtcatttaaaaaataagaatttagattatatttt 13051718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 14899886 - 14899941
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| ||||| |||||||| |||||| |||||||||||||||||    
T  14899886 ttatacccttaaacaactttttatataataaagattgttgttggtgtcattaaaaa 14899941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 22102418 - 22102473
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| |||||| ||||||| |||||| |||||||||||||||||    
T  22102418 ttatacccttaaacaactttttccataataaagattgttgttggtgtcattaaaaa 22102473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 22177366 - 22177421
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| |||||| ||||||| |||||| |||||||||||||||||    
T  22177366 ttatacccttaaacaactttttccataataaagattgttgttggtgtcattaaaaa 22177421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 36920798 - 36920852
Alignment:
Q  170 ttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||||||||||| ||||||  |||||||||||||||| |||||||| ||||||||    
T  36920798 ttttctataataaagattgtt-ttggtgtcattaaaaaaataagaatgtagattat 36920852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 37431504 - 37431559
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||||||  |||||| |||||||||||||| |||||  |||||||||||||||||    
T  37431504 ttatactcataaacaactttttctataataaagattgatgttggtgtcattaaaaa 37431559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 42401621 - 42401561
Alignment:
Q  170 ttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||||||||||||||||| ||||||||| ||||||  | ||||||||| ||||| ||||||    
T  42401621 ttttctataataatgattgttgttggtgtcgttaaaa--aaaagaatttatattatatttttt 42401561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 5812169 - 5812119
Alignment:
Q  157 ctctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||| |||||| |||||||||||||| ||| || |||||||||||||||||    
T  5812169 ctcttaaacaactttttctataataaagatcgttgttggtgtcattaaaaa 5812119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 14265811 - 14265878
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatct-tttttgttat 237  Q
    |||||||||||||| |||||| |||| |||||||||||  | ||||||||||||||| | ||||||||||    
T  14265811 tttttctataataaagattgttgttgatgtcattaaaa--aaaagaatttagattatatatttttgttat 14265878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 53162394 - 53162324
Alignment:
Q  164 acaaatttttctataataatgattgtcgttggtgtcatta-aaaagataagaatttagattatcttttttg 233  Q
    |||| |||||||||||| | |||||| ||||||||||||| ||||  |||||||||||| ||| |||||||    
T  53162394 acaactttttctataattaagattgttgttggtgtcattagaaaaagtaagaatttagaatatattttttg 53162324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 14266322 - 14266367
Alignment:
Q  161 aaaacaaatttttctataataatgattgtcgttggtgtcattaaaa 206  Q
    ||||||||||||||||||||||  ||||| | ||||||||||||||    
T  14266322 aaaacaaatttttctataataaaaattgttgctggtgtcattaaaa 14266367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 32509258 - 32509303
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||||||||||||||||||| |||||| ||  |||||||||||||    
T  32509258 aaacaaatttttctataataaagattgttgtgtgtgtcattaaaaa 32509303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 35938814 - 35938895
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaaga-taagaatttagattatctttttt 232  Q
    |||||| || |||||| ||||| |||||||| |||||| |||||  |||||||||| | ||||||||||||| || ||||||    
T  35938814 ttatacccttaaacaactttttatataataaagattgttgttggaatcattaaaaaaaataagaatttagataatatttttt 35938895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 41923354 - 41923410
Alignment:
Q  175 tataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||  ||||| ||||||||||||||||| | ||||||||||||||| ||||||    
T  41923354 tataataaaaattgttgttggtgtcattaaaaa-aaaagaatttagattatatttttt 41923410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 47787323 - 47787262
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttt 230  Q
    ||||||||||||||  ||||| |||| |||||||||||| || | |||||||||||| ||||    
T  47787323 tttttctataataaatattgttgttgatgtcattaaaaaaattaaaatttagattatatttt 47787262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 223
Target Start/End: Original strand, 296306 - 296334
Alignment:
Q  195 gtgtcattaaaaagataagaatttagatt 223  Q
    |||||||||||||||||||||||||||||    
T  296306 gtgtcattaaaaagataagaatttagatt 296334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 3890270 - 3890190
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| |||||||| ||||| |||||| |||||| ||||| |||| | |  |||||||||||| ||||||    
T  3890270 ttatacccttaaacaactttttctacaataaagattgttgttggtttcattgaaaaaaaacaaatttagattatatttttt 3890190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 163 - 207
Target Start/End: Complemental strand, 3899847 - 3899803
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||| |||||||||||||| |||||| |||| ||||||||||||    
T  3899847 aacaattttttctataataaagattgttgttgatgtcattaaaaa 3899803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 4577880 - 4577819
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||||||||||| |||||| |||||||||||| |||  | ||||||||| ||||| ||||||    
T  4577880 tttttctataataaagattgttgttggtgtcatttaaa--aaaagaatttatattatatttttt 4577819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 163 - 223
Target Start/End: Complemental strand, 23251112 - 23251052
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatt 223  Q
    ||||| |||||||||||||| |||| | ||| || ||||| |||| |||||||||||||||    
T  23251112 aacaattttttctataataaagattattgttagtatcattcaaaaaataagaatttagatt 23251052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 232 - 260
Target Start/End: Complemental strand, 45885678 - 45885650
Alignment:
Q  232 tgttattttctttatatataatatagata 260  Q
    |||||||||||||||||||||||||||||    
T  45885678 tgttattttctttatatataatatagata 45885650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 12069442 - 12069524
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    ||||||||| |||||| |||||||||||||| |||||| |||||||||||||||||   ||||||||||||||| |||||||||||    
T  12069442 ttatactcttaaacaactttttctataataaagattgttgttggtgtcattaaaaa---aagaatttagattatattttttgttat 12069524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 38702299 - 38702224
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatct-tttttgttat 237  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||| | ||||||||||    
T  38702299 aacaactttttctataataaagattgttgttggtgtcattaaaaaaataagaatttagattatatatttttgttat 38702224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 152 - 230
Target Start/End: Complemental strand, 1071223 - 1071145
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttt 230  Q
    ||||||||| |||||| |||||||||||||| |||||| |||| |||||||||||| ||||| ||||||||||| ||||    
T  1071223 ttatactcttaaacaattttttctataataaagattgttgttgatgtcattaaaaaaataagtatttagattatatttt 1071145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 20579407 - 20579340
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||||||||||||| ||||||  |||||||||||||||| ||||||||||||||||| |||||||||||    
T  20579407 tttttctataataaagattgtttttggtgtcattaaaaa-ataagaatttagattatattttttgttat 20579340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 19063875 - 19063945
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcatt-aaaaagataagaatttagattatctttttt 232  Q
    ||||| |||||||||||||| |||||| |||||||||||| ||||| ||||||||||||||||| ||||||    
T  19063875 aacaactttttctataataaagattgttgttggtgtcattaaaaaaaataagaatttagattatatttttt 19063945  T

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Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 36080237 - 36080304
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||  ||||||||||||||||| ||||||    
T  36080237 aacaattttttctataataaagattgttgttggtgtcattaaaa--ataagaatttagattatatttttt 36080304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 36205274 - 36205205
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctt-ttttgttat 237  Q
    ||||||||||||||  ||||| ||||||||||||||||| ||||||||||||||||| || |||||||||    
T  36205274 tttttctataataaatattgttgttggtgtcattaaaaaaataagaatttagattatattcttttgttat 36205205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 18072385 - 18072457
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||  | ||||||||||||||| ||||| |||||    
T  18072385 aacaactttttctataataaagattgttgttggtgtcattaaaa--aaaagaatttagattatatttttcgttat 18072457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 169 - 232
Target Start/End: Original strand, 19064090 - 19064153
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||||||||||| |||||| ||| ||||||||||||| ||||||||||| ||||| ||||||    
T  19064090 tttttctataataaagattgttgttcgtgtcattaaaaaaataagaatttaaattatatttttt 19064153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 24100669 - 24100756
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcatt-aaaaagataagaatttagattat-cttttttgttat 237  Q
    |||||| || ||||||  ||||||||||||| |||||| |||||||||||| ||||| |||||||||||||||||  |||||||||||    
T  24100669 ttatacccttaaacaatattttctataataaagattgttgttggtgtcattaaaaaaaataagaatttagattataattttttgttat 24100756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 29241369 - 29241290
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttt 231  Q
    ||||||| | |||||  ||||| ||||||| ||||||| |||||| ||||||||||||||||| |||||||||| |||||    
T  29241369 ttatactattaaacagctttttatataatagtgattgttgttggtatcattaaaaagataagattttagattatattttt 29241290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 152 - 237
Target Start/End: Complemental strand, 33676800 - 33676718
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||||| || |||||| |||||||||||||| |||||| |||||||||||||||   | ||||||||||||| | |||||||||||    
T  33676800 ttatacccttaaacaattttttctataataaagattgttgttggtgtcattaaa---agaagaatttagatttttttttttgttat 33676718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 12069659 - 12069719
Alignment:
Q  174 ctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    ||||||||| |||||| |||||||||||||||||   ||||||||||||||| |||||||||||    
T  12069659 ctataataaagattgttgttggtgtcattaaaaa---aagaatttagattatattttttgttat 12069719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 19813962 - 19813890
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    |||||| || |||||| |||||||||||||| |||||| ||||||||||||||||| || |||||||| |||||    
T  19813962 ttatacacttaaacaattttttctataataaagattgttgttggtgtcattaaaaaaat-agaatttaaattat 19813890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 225
Target Start/End: Original strand, 360348 - 360404
Alignment:
Q  170 ttttctataataatgattgtcgttggtgtcatt-aaaaagataagaatttagattat 225  Q
    |||||||||||||||||||| |||||||||||| ||||| ||||||||||| |||||    
T  360348 ttttctataataatgattgttgttggtgtcattaaaaaaaataagaatttatattat 360404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 963323 - 963247
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctt-ttttgttatt 238  Q
    ||||| ||||| |||||||| |||||| ||||||||||||||||| |||  |||||||||||| || ||||||||||    
T  963323 aacaactttttttataataaagattgttgttggtgtcattaaaaaaatagaaatttagattatattattttgttatt 963247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 20625316 - 20625380
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaat 216  Q
    |||||||||||||||| ||||||||||||||||| | | || |||||| ||||||||| ||||||    
T  20625316 ttatactctaaaacaattttttctataataatgaattttgtaggtgtccttaaaaagaaaagaat 20625380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 34063225 - 34063277
Alignment:
Q  155 tactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| ||||||||||||||||||||| ||| || |||||||||||||||||    
T  34063225 tactcttaaacaaatttttctataataaagatcgttgttggtgtcattaaaaa 34063277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 41122687 - 41122752
Alignment:
Q  170 ttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||| |||||||| |||||| ||||||||||||||||  | ||||||||||||||| |||||||||||    
T  41122687 ttttttataataaagattgttgttggtgtcattaaaa--aaaagaatttagattatattttttgttat 41122752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 163 - 233
Target Start/End: Complemental strand, 9415106 - 9415035
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcatt-aaaaagataagaatttagattatcttttttg 233  Q
    ||||| ||||||||||||||  ||||| |||||| ||||| ||||| ||||||||||||||||| |||||||    
T  9415106 aacaactttttctataataaaaattgttgttggtatcattaaaaaaaataagaatttagattatattttttg 9415035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 42949740 - 42949807
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| |||||||||||||| |||||| ||||||||||||||||  | ||||||||||||||| ||||||    
T  42949740 aaacaattttttctataataa-gattgttgttggtgtcattaaaa--aaaagaatttagattatatttttt 42949807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 16039353 - 16039423
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || || |||||||| |||||| ||||||||||||||||| ||||| ||||| ||||| ||||||    
T  16039353 aaacaacttgttttataataaagattgttgttggtgtcattaaaaaaataagtatttaaattatatttttt 16039423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 206
Target Start/End: Complemental strand, 35126016 - 35125962
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaa 206  Q
    ||||||||| |||||| |||||| ||||||| |||||| ||||||||||||||||    
T  35126016 ttatactcttaaacaactttttcaataataaagattgttgttggtgtcattaaaa 35125962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 36341723 - 36341669
Alignment:
Q  153 tatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||| || |||||| |||||||||||||| |||||||||| |||||||||||||    
T  36341723 tatacccttaaacaattttttctataataaagattgtcgttagtgtcattaaaaa 36341669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 230
Target Start/End: Original strand, 44857484 - 44857562
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttt 230  Q
    ||||||| ||||| || ||||||| ||||||||||||| || |||||||||| ||| |||||| |||| ||||| ||||    
T  44857484 ttatactataaaataattttttctttaataatgattgttgtcggtgtcattacaaaaataagagtttaaattatatttt 44857562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 10553176 - 10553260
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||||| || ||||||  |||||||||||||  ||||| ||||||||||||||||| | | ||||||||||| | |||||||||||    
T  10553176 ttatacccttaaacaacgttttctataataaaaattgttgttggtgtcattaaaaa-aaatgaatttagattttgttttttgttat 10553260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 24004624 - 24004548
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcatt--aaaaagataagaatttagattatcttttttgttat 237  Q
    ||||| |||||||||||||| |||||| | ||||| ||||  ||||| |||||| |||||||||| |||||||||||    
T  24004624 aacaactttttctataataaagattgttgctggtgacattaaaaaaaaataagattttagattatattttttgttat 24004548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 38692564 - 38692631
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| |||||||||||||| ||||||  |||||||||||||||| || |||||||||||||| ||||||    
T  38692564 aacaactttttctataataaagattgttattggtgtcattaaaaa-at-agaatttagattatatttttt 38692631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 41384563 - 41384491
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||||| |||||||||||||| |||| | | |||| ||||||||||   ||||||||||||||| |||||||||||    
T  41384563 aaacaactttttctataataaagatttttgatggtatcattaaaaa---aagaatttagattatattttttgttat 41384491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 629614 - 629693
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| |||||||||||||| ||||||  |||||||| ||| ||| | ||||||||||||||| ||||||    
T  629614 ttatacccttaaacaattttttctataataaagattgtttttggtgtcgttataaa-aaaagaatttagattatatttttt 629693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 204
Target Start/End: Complemental strand, 44020113 - 44020061
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaa 204  Q
    ||||||||  |||||| |||||||||||||| |||||| ||||||||||||||    
T  44020113 ttatactcgtaaacaactttttctataataaagattgttgttggtgtcattaa 44020061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 3357758 - 3357683
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| |||||||||||||||   ||| ||||||||||||||||  | ||||||||||||||| ||||||    
T  3357758 ttatacccttaaacaactttttctataataat---tgttgttggtgtcattaaaa--aaaagaatttagattatatttttt 3357683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 7603738 - 7603683
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||||||| |||||| |||||||||||||| ||| || ||| |||||||||||||    
T  7603738 ttatactcttaaacaactttttctataataaagatcgttgtttgtgtcattaaaaa 7603683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 13837034 - 13836979
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||||||  ||||| |||||||||||||| |||||| ||||| |||||||||||    
T  13837034 ttatactcttgaacaattttttctataataaagattgttgttggcgtcattaaaaa 13836979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 30977072 - 30977002
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    |||||| || || ||| ||||| |||||||| |||||| |||||||||||||||||   |||||||||||||||    
T  30977072 ttatacgctcaatcaactttttatataataaagattgttgttggtgtcattaaaaa---aagaatttagattat 30977002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 167 - 237
Target Start/End: Original strand, 41014284 - 41014352
Alignment:
Q  167 aatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    ||||||||||||||||  ||||| |||| |||||||||||    ||||||||||||||| |||||||||||    
T  41014284 aatttttctataataaatattgttgttgatgtcattaaaa--taaagaatttagattatattttttgttat 41014352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 13450154 - 13450224
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||||| ||||||||||||||  ||||| |||| |||||||||||||    ||||||||||||| |||||||||||    
T  13450154 aaacaactttttctataataaa-attgttgttgctgtcattaaaaag----gaatttagattatattttttgttat 13450224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 19133436 - 19133493
Alignment:
Q  174 ctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||| |||||| ||||||||||||||||| | ||||||||| ||||| ||||||    
T  19133436 ctataataaagattgttgttggtgtcattaaaaata-aagaatttatattatatttttt 19133493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 207
Target Start/End: Complemental strand, 39271656 - 39271618
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  39271656 tttttctataataaagattgttgttggtgtcattaaaaa 39271618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 40301685 - 40301627
Alignment:
Q  154 atactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataa 212  Q
    ||||||| |||  |||||||||||||||| |||||| |||| |||||||||||| ||||    
T  40301685 atactcttaaaacaatttttctataataaagattgttgttgatgtcattaaaaatataa 40301627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 42185788 - 42185857
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| ||||||||||||||  | ||| ||||||||||||||||| | |||| |||||||||| ||||||    
T  42185788 aaacaattttttctataataaatactgttgttggtgtcattaaaaa-aaaagattttagattatatttttt 42185857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 13594333 - 13594263
Alignment:
Q  153 tatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||| || |||||| |||||||||||||| ||| || |||| |||||||||||  | |||||||||||||||    
T  13594333 tatacccttaaacaattttttctataataaagatcgttgttgatgtcattaaaa--aaaagaatttagattat 13594263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 17372471 - 17372508
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaa 206  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  17372471 tttttctataataaagattgttgttggtgtcattaaaa 17372508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 18746050 - 18746115
Alignment:
Q  167 aatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||| ||||||||||||||| |||| |||||||  ||| |||| |||||||||| | ||||||    
T  18746050 aatttttttataataatgattgttgttgatgtcattgcaaaaataaaaatttagattttttttttt 18746115  T

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Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 225
Target Start/End: Complemental strand, 42060484 - 42060430
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||||||||||||  ||||| ||||||||||||||||  | |||||||||||||||    
T  42060484 tttttctataataaaaattgttgttggtgtcattaaaa--aaaagaatttagattat 42060430  T

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Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 45407012 - 45407056
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaa 206  Q
    |||||| || ||||||||||| |||||| ||||||||||||||||    
T  45407012 aaacaatttcttctataataaagattgttgttggtgtcattaaaa 45407056  T

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Target: chr1 (Bit Score: 51; Significance: 5e-20; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 40808816 - 40808742
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||  |||||||||||    
T  40808816 aacaactttttctataataaagattgttgttggtgtcattaaaaaaataagaatttagattaatttttttgttat 40808742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 11408992 - 11409061
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||| ||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||| ||||||    
T  11408992 aacatatttttctataataaagattgttgttggtgtcattaaaaaaataagaatttagattatatttttt 11409061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 43416024 - 43415959
Alignment:
Q  167 aatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||| ||||||    
T  43416024 aatttttctataataataattgttgttggtgtcattaaaatgataagaatttagattatatttttt 43415959  T

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Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 25298061 - 25298131
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||||||||||||||| ||| || ||||||||||||||||| | ||||||||||||||| ||||||    
T  25298061 aaacaaatttttctataataaagatcgttgttggtgtcattaaaaaaaaaagaatttagattatatttttt 25298131  T

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Target: chr1; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 152 - 231
Target Start/End: Original strand, 11344937 - 11345013
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttt 231  Q
    ||||||||| |||||| |||||||||||||| |||||| |||||||||||||||||   ||||||||||||||| |||||    
T  11344937 ttatactcttaaacaactttttctataataaagattgttgttggtgtcattaaaaa---aagaatttagattattttttt 11345013  T

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Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 36605568 - 36605488
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||| | |||  |||||||||||||| |||||| ||||||||||||||||| |||| |||||||||||| ||||||    
T  36605568 ttatactcttagacatttttttctataataaagattgttgttggtgtcattaaaaaaataaaaatttagattatatttttt 36605488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 13315291 - 13315212
Alignment:
Q  153 tatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| || |||||| |||||||||||||| |||||| |||||| |||||||||| ||||||||||| ||||| ||||||    
T  13315291 tatacccttaaacaactttttctataataaagattgttgttggtatcattaaaaaaataagaatttaaattatatttttt 13315212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 33326840 - 33326769
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatt 223  Q
    ||||||||| |||||| ||||||||||||||  ||||| ||||||||||||||||| ||||||||| |||||    
T  33326840 ttatactcttaaacaactttttctataataaatattgttgttggtgtcattaaaaaaataagaattgagatt 33326769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 33474282 - 33474369
Alignment:
Q  152 ttatactctaaaacaaatttt-tctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatct-tttttgttat 237  Q
    ||||||| |||||||| |||| ||||||||||||||||| |||| ||| ||||||||||||| |||||||||||| | ||||||||||    
T  33474282 ttatactttaaaacaatttttttctataataatgattgttgttgttgttattaaaaagataataatttagattatatatttttgttat 33474369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 12267063 - 12267149
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttat 237  Q
    |||||| || |||||| |||||||||||||| |||||| ||||||||||||||||| |||  ||||||||||||  |||||||||||    
T  12267063 ttatacccttaaacaactttttctataataaagattgttgttggtgtcattaaaaaaatatcaatttagattataattttttgttat 12267149  T

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Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 167 - 237
Target Start/End: Complemental strand, 25822187 - 25822118
Alignment:
Q  167 aatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||||||||||||||| |||||||||||||||||||||| | | ||||||||| ||||| |||||||||||    
T  25822187 aatttttctataataaagattgtcgttggtgtcattaaaca-aaaagaatttacattatattttttgttat 25822118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 24561242 - 24561311
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatct-tttttgttat 237  Q
    |||||||||||||| |||||| ||||||||||||||||| ||||||||||| ||||| | ||||||||||    
T  24561242 tttttctataataaagattgttgttggtgtcattaaaaaaataagaatttaaattatatatttttgttat 24561311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 225
Target Start/End: Complemental strand, 27927117 - 27927046
Alignment:
Q  153 tatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    |||| |||||||||| ||||||||||| || |||||| |||| |||||||||||||| |||||||||||||||    
T  27927117 tatagtctaaaacaa-tttttctataacaacgattgttgttgatgtcattaaaaagacaagaatttagattat 27927046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 34969415 - 34969360
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||||||| |||||| |||||||||||||| |||||| |||||||||||||||||    
T  34969415 ttatactcttaaacaattttttctataataaagattgttgttggtgtcattaaaaa 34969360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 115942 - 115873
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| ||||| |||||||| |||||| ||||||||||||||||| | ||||||||||||||| ||||||    
T  115942 aaacaactttttatataataaagattgttgttggtgtcattaaaaata-aagaatttagattatatttttt 115873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 170 - 236
Target Start/End: Complemental strand, 17579964 - 17579899
Alignment:
Q  170 ttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgtta 236  Q
    |||| |||||||| |||||| |||| |||||||||||||| ||||||||||||||| ||||||||||    
T  17579964 ttttttataataaagattgttgttgatgtcattaaaaaga-aagaatttagattatattttttgtta 17579899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 45943299 - 45943369
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| |||||||||||||| |||||| ||| ||||||||||||| | ||||||||| ||||| ||||||    
T  45943299 aaacaattttttctataataaagattgttgttagtgtcattaaaaaaaaaagaatttaaattatatttttt 45943369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 5965820 - 5965751
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| ||||||| |||||| |||| | |||| |||||||||||| ||||||||||||||||| ||||||    
T  5965820 aacaactttttctttaataaagattattgttgatgtcattaaaaaaataagaatttagattatatttttt 5965751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 21335085 - 21335040
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||    
T  21335085 aaacaactttttctataataaagattgtcgttggtgtcattaaaaa 21335040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 34748818 - 34748896
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||| |||||| ||||||| ||| || |||||| ||||||||||||||||  | ||||||||||||||| ||||||    
T  34748818 ttatactcttaaacaactttttctttaacaaggattgttgttggtgtcattaaaa--aaaagaatttagattatatttttt 34748896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 46880059 - 46880137
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| ||||||| |||||| |||||| ||||||||||||||||  | ||||||||||||||| ||||||    
T  46880059 ttatacccttaaacaattttttctgtaataaagattgttgttggtgtcattaaaa--aaaagaatttagattatatttttt 46880137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 13303951 - 13304015
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcatt-aaaaagataagaatttagattat 225  Q
    |||||| |||||||||||||| |||||| |||||||||||| ||||| | |||||||||||||||    
T  13303951 aaacaactttttctataataaagattgttgttggtgtcattaaaaaaaaaaagaatttagattat 13304015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 12301014 - 12301098
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatct-tttttgttat 237  Q
    ||||||| | |||||| ||||||||||||||  ||||| ||||||||||||||||  | ||||||||||||||| | ||||||||||    
T  12301014 ttatacttttaaacaactttttctataataaaaattgttgttggtgtcattaaaa--aaaagaatttagattatatctttttgttat 12301098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 15470487 - 15470542
Alignment:
Q  177 taataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| |||||| |||||||| |||||||| ||||||||||||||||| ||||||    
T  15470487 taataaagattgttgttggtgttattaaaaaaataagaatttagattatatttttt 15470542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 16424482 - 16424537
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| |||||||||||||| |||||| |||||||||||||||||    
T  16424482 ttatacccttaaacaactttttctataataaggattgttgttggtgtcattaaaaa 16424537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 14386879 - 14386941
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||| ||| |||||||||| |||||| |||| ||||||| |||| |||||||||||||||||    
T  14386879 aacaattttctctataataaagattgttgttgatgtcattcaaaaaataagaatttagattat 14386941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 31845105 - 31845187
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||||| || |||||| ||||||||||||||  ||||| ||||||||||||||||  | |||||||||| |||| |||||||||||    
T  31845105 ttatacccttaaacaactttttctataataa-aattgttgttggtgtcattaaaa--aaaagaatttaggttatattttttgttat 31845187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 43575717 - 43575639
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || ||||||||||||||||||||| |||  | |||||||||||||||||  |  ||||||||||||| ||||||    
T  43575717 ttatacccttaaacaaatttttctataataaagatcattgttggtgtcattaaaaaagt--gaatttagattatatttttt 43575639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 1531323 - 1531257
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| |||||||||||||| | |||| |||||||||||||||||   ||||||||||||||| ||||||    
T  1531323 aaacaattttttctataataaag-ttgttgttggtgtcattaaaaa---aagaatttagattatatttttt 1531257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 225
Target Start/End: Complemental strand, 8209480 - 8209440
Alignment:
Q  185 attgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  8209480 attgttgttggtgtcattaaaaaaataagaatttagattat 8209440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 8574014 - 8574062
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtca 200  Q
    ||||||||| |||||| |||||||||||||| |||||| ||||||||||    
T  8574014 ttatactcttaaacaactttttctataataaagattgttgttggtgtca 8574062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 31528643 - 31528687
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaa 206  Q
    |||||| |||||||||||||| |||||| ||||||||||||||||    
T  31528643 aaacaactttttctataataaagattgttgttggtgtcattaaaa 31528687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 50943944 - 50943896
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatt 217  Q
    ||||| |||||||| |||||| ||||||||||||||||| |||||||||    
T  50943944 tttttttataataaagattgttgttggtgtcattaaaaaaataagaatt 50943896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 14746521 - 14746467
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||||||| |||||| ||||||||||||||  ||||| |||||||||||||||||    
T  14746521 ttatactcttaaacaactttttctataataa-aattgttgttggtgtcattaaaaa 14746467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 16823678 - 16823623
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| |||||||||||||| ||||||||||| ||| ||||||||    
T  16823678 ttatacccttaaacaactttttctataataaagattgtcgttgatgttattaaaaa 16823623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 21343896 - 21343951
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| |||| ||||||||| |||||| |||||||||||||||||    
T  21343896 ttatacccttaaacaatttttactataataaagattgttgttggtgtcattaaaaa 21343951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 21348761 - 21348816
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| |||| ||||||||| |||||| |||||||||||||||||    
T  21348761 ttatacccttaaacaatttttactataataaagattgttgttggtgtcattaaaaa 21348816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 47576780 - 47576725
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||||| | |||||| ||||||||||||||  ||||| |||||||||||||||||    
T  47576780 ttatacttttaaacaactttttctataataaatattgttgttggtgtcattaaaaa 47576725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 48715933 - 48715865
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| |||||||||||||||||| || |||| |||||||||||  | ||||||||| ||||| ||||||    
T  48715933 aaacaactttttctataataatgatcgttgttgatgtcattaaaa--aaaagaatttaaattatatttttt 48715865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 2666161 - 2666237
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| ||||||||||||||  |||||  ||||||||||||||||   ||||||||||||||| ||||||    
T  2666161 ttatacccttaaacaactttttctataataa-aattgttattggtgtcattaaaaa---aagaatttagattatatttttt 2666237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 10844319 - 10844250
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| |||||||||||||| ||  || |||| |||||||||||| | ||||||||||||||| ||||||    
T  10844319 aaacaattttttctataataaagaacgttgttgatgtcattaaaaa-aaaagaatttagattatatttttt 10844250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 225
Target Start/End: Complemental strand, 23773424 - 23773366
Alignment:
Q  167 aatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    |||||||||||||||| |||||| |||||||| |||| ||| |||| |||||| |||||    
T  23773424 aatttttctataataaagattgttgttggtgttattacaaaaataataatttaaattat 23773366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 230
Target Start/End: Original strand, 48668488 - 48668568
Alignment:
Q  151 tttatactctaaaacaaatttttctataataatgattgtcgttggtgtcatt--aaaaagataagaatttagattatctttt 230  Q
    |||||||||| |||||| ||||||||| | || |||||  ||||||||||||  ||||| ||||||||||||||||| ||||    
T  48668488 tttatactcttaaacaa-tttttctatgacaaagattggtgttggtgtcattaaaaaaaaataagaatttagattatatttt 48668568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 170 - 232
Target Start/End: Complemental strand, 52397171 - 52397111
Alignment:
Q  170 ttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||||||| |||||| |||||| |||||||||||| ||||||| ||||||| ||||||    
T  52397171 ttttctataataa-gattgttgttggtatcattaaaaaga-aagaattcagattatatttttt 52397111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 8096240 - 8096317
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| ||||| ||||||||  ||||| ||||||||||||||||  | ||||||||||||||| ||||||    
T  8096240 ttatacccttaaacaactttttatataataaa-attgttgttggtgtcattaaaa--aaaagaatttagattatatttttt 8096317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 12264891 - 12264948
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaaga 209  Q
    |||||| || |||||| |||| ||||||||| |||||| ||| |||||||||||||||    
T  12264891 ttatacccttaaacaacttttactataataaagattgttgttagtgtcattaaaaaga 12264948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 13315154 - 13315109
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| ||||||||| |||| |||||| |||||||||||||||||    
T  13315154 aaacaactttttctattataaagattgttgttggtgtcattaaaaa 13315109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 212
Target Start/End: Complemental strand, 24005101 - 24005060
Alignment:
Q  171 tttctataataatgattgtcgttggtgtcattaaaaagataa 212  Q
    |||||||||||| |||||| ||||||||||||||||| ||||    
T  24005101 tttctataataaagattgttgttggtgtcattaaaaaaataa 24005060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 233
Target Start/End: Complemental strand, 27904398 - 27904336
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttg 233  Q
    ||||| |||||||| |||||| ||||||||||||||||  | ||||||| ||||||| |||||||    
T  27904398 tttttttataataaagattgttgttggtgtcattaaaa--aaaagaattcagattatattttttg 27904336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 48419997 - 48420056
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatt 223  Q
    |||||| |||||||||||||| ||| || |||||||||||| |||||| |||||||||||||    
T  48419997 aaacaactttttctataataaagatcgttgttggtgtcatt-aaaaga-aagaatttagatt 48420056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 52043386 - 52043431
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| |||||||||||||| |||| | |||||||||||||||||    
T  52043386 aaacaactttttctataataaagatttttgttggtgtcattaaaaa 52043431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 205
Target Start/End: Original strand, 8699296 - 8699332
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaa 205  Q
    |||||||||||||| |||||| |||||||||||||||    
T  8699296 tttttctataataaagattgttgttggtgtcattaaa 8699332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 37706082 - 37706024
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttt 231  Q
    ||||||||||||||  ||||| |||||||||||||||||   ||||||||||||||| |||||    
T  37706082 tttttctataataaa-attgttgttggtgtcattaaaaa---aagaatttagattatattttt 37706024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 24836764 - 24836849
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    ||||||||| |||||| ||||||||||||||  ||||| ||||||||||||||||| | ||||||||||||||| | |||||||||    
T  24836764 ttatactcttaaacaattttttctataataaatattgttgttggtgtcattaaaaaaaaaagaatttagattatatcttttgttat 24836849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 42919026 - 42918946
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||||||| | |||| |||||||||||||| |||||| |||||||| |||||||| ||||||||||||||||| ||||||    
T  42919026 ttatactcttacacaactttttctataataaagattgttgttggtgtgattaaaaaaataagaatttagattatatttttt 42918946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 42207841 - 42207915
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    ||||| ||||| |||||||| |||||| ||||||||||||||||| ||||||||||||||| | |||||||||||    
T  42207841 aacaactttttttataataaagattgttgttggtgtcattaaaaaaataagaatttagatttttttttttgttat 42207915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 18526944 - 18527007
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    |||||| |||||||||||||| |||||| |||||||||||| |||| |||||||||||||||||    
T  18526944 aaacaactttttctataataaagattgttgttggtgtcattcaaaatataagaatttagattat 18527007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 5769741 - 5769810
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| ||||||| |||||| |||||| ||||||||||||||||| |||| |||||||||||| ||||||    
T  5769741 aacaactttttctttaataaagattgttgttggtgtcattaaaaaaataaaaatttagattatatttttt 5769810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 25782058 - 25781990
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| ||||||||||||||  ||||| ||||||||||||||||| ||||||||||||||||| ||||||    
T  25782058 aacaattttttctataataaaaattgttgttggtgtcattaaaaa-ataagaatttagattatatttttt 25781990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 29403105 - 29403041
Alignment:
Q  173 tctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||||||||| |||||| ||||||||| ||||||| |||| |||||||||||| |||||||||||    
T  29403105 tctataataaagattgttgttggtgtcgttaaaaaaataaaaatttagattatattttttgttat 29403041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 38697061 - 38696994
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| |||||||||||||| |||||| |||||||||||||||||   ||||||||||||||| ||||||    
T  38697061 aaacaattttttctataataaagattgttgttggtgtcattaaaaa---aagaatttagattatatttttt 38696994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 39850834 - 39850913
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || ||||||||||||||||||||| |||||| ||||||||||||||||| | |||| |||| ||||| ||||||    
T  39850834 ttatacccttaaacaaatttttctataataaagattgttgttggtgtcattaaaaa-aaaagagtttatattatatttttt 39850913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 15341781 - 15341848
Alignment:
Q  170 ttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    ||||||||||||| |||||| | ||||| |||||||||||||| ||||||||||||  ||||||||||    
T  15341781 ttttctataataacgattgttgctggtgacattaaaaagataaaaatttagattataatttttgttat 15341848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 8990368 - 8990418
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaattta 219  Q
    |||||||||||||| |||||| ||||||||||||||||| |||||||||||    
T  8990368 tttttctataataaagattgttgttggtgtcattaaaaaaataagaattta 8990418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 28340242 - 28340311
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| ||||| ||| ||||||||||| ||| ||||||||||||| ||||||||||| ||||| ||||||    
T  28340242 aacaactttttatattataatgattgttgtttgtgtcattaaaaaaataagaatttaaattatatttttt 28340311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 28766298 - 28766370
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||||||| |||||| |||||||||||||| |||||| |||||||| |||||||| | |||| ||||||||||    
T  28766298 ttatactcttaaacaattttttctataataaagattgttgttggtgtaattaaaaa-aaaagattttagattat 28766370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 169 - 232
Target Start/End: Original strand, 936139 - 936202
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||| ||||||||| |||||| |||||||||||| |||| |||| |||||||||||| ||||||    
T  936139 ttttcctataataaagattgttgttggtgtcattcaaaaaataaaaatttagattatatttttt 936202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 169 - 224
Target Start/End: Original strand, 1611461 - 1611516
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatta 224  Q
    ||||||||||||||  ||| | ||||||||||||||||| ||||||||||||||||    
T  1611461 tttttctataataaaaattattgttggtgtcattaaaaaaataagaatttagatta 1611516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 17210565 - 17210620
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| |||||||||||||| |||||| |||||||||||||||||    
T  17210565 ttatacccttaaacaattttttctataataaagattgttgttggtgtcattaaaaa 17210620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 178 - 237
Target Start/End: Original strand, 17704916 - 17704975
Alignment:
Q  178 aataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    ||||| |||||| |||| |||||||||||| || |||||||||||||| |||||||||||    
T  17704916 aataaagattgttgttgttgtcattaaaaaaattagaatttagattatattttttgttat 17704975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 36226466 - 36226521
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| |||||||||||||| |||||| |||||||||||||||||    
T  36226466 ttatacccttaaacaactttttctataataaagattgttgttggtgtcattaaaaa 36226521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 41862869 - 41862943
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatct-tttttgttat 237  Q
    ||||| |||||||||||||| |||||| ||||| |||||||| || ||||||||||||||||| | ||||||||||    
T  41862869 aacaactttttctataataaagattgttgttggcgtcattaagaa-ataagaatttagattatatatttttgttat 41862943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 7464173 - 7464099
Alignment:
Q  152 ttatactctaaaacaaatttttctataataat----gattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    |||||| || ||||||||||||||||||||||    |||||| |||||||||||||||||   |||||||||||||||    
T  7464173 ttatacccttaaacaaatttttctataataattaaagattgttgttggtgtcattaaaaa---aagaatttagattat 7464099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 7649113 - 7649046
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||  | ||||||||| ||||| ||||||    
T  7649113 aacaactttttctataataaagattgttgttggtgtcattaaaa--aaaagaatttatattatttttttt 7649046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 15232258 - 15232196
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||| ||||||||||||||  ||||| ||| |||| |||||||| |||||||||||||||||    
T  15232258 aacaactttttctataataaaaattgttgttagtgttattaaaaaaataagaatttagattat 15232196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 17064994 - 17064948
Alignment:
Q  161 aaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||||| |||||||||||||| |||||| |||||||||||||||||    
T  17064994 aaaacaattttttctataataaagattgttgttggtgtcattaaaaa 17064948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 834271 - 834195
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttt 231  Q
    |||||| || |||||| |||||||||||||| |||||| |||||||||| ||||||   |||||| |||||||| |||||    
T  834271 ttatacccttaaacaactttttctataataaagattgttgttggtgtcagtaaaaa---aagaatctagattatattttt 834195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 8786769 - 8786724
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| |||||||||||||| |||||| |||||||||||||||||    
T  8786769 aaacaactttttctataataaagattgttgttggtgtcattaaaaa 8786724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 19128670 - 19128587
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcatta---aaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| |||||||||||||| ||| || |||||||||||||   |||| | ||||||||||||||| ||||||    
T  19128670 ttatacccttaaacaactttttctataataaagatcgttgttggtgtcattaaaaaaaaaaaaagaatttagattatatttttt 19128587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 176 - 237
Target Start/End: Original strand, 27832331 - 27832392
Alignment:
Q  176 ataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||||||  ||||| ||| ||||||||||||| ||||||||||| ||||| |||||||||||    
T  27832331 ataataaatattgttgttcgtgtcattaaaaaaataagaatttaaattatattttttgttat 27832392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 232
Target Start/End: Original strand, 8839840 - 8839904
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagat-aagaatttagattatctttttt 232  Q
    |||||||||||||| |||||| ||||||||||||||||| || || |||||| ||||| ||||||    
T  8839840 tttttctataataaagattgttgttggtgtcattaaaaaaataaaaaatttacattatatttttt 8839904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 230
Target Start/End: Complemental strand, 25754636 - 25754561
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttt 230  Q
    |||||| || ||| || |||||||||||||| |||||| |||||||||||||||||   ||||||||| ||||| ||||    
T  25754636 ttatacccttaaataactttttctataataaagattgttgttggtgtcattaaaaa---aagaatttaaattatatttt 25754561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 22702283 - 22702366
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcatt-aaaaagataagaatttagattatcttttttgt 234  Q
    |||||| || |||||| ||||||||||| || |||||| |||||||||||| ||| | |  |||||||||||||| ||||||||    
T  22702283 ttatacccttaaacaactttttctataagaaagattgttgttggtgtcattgaaagaaaatagaatttagattatattttttgt 22702366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 40493862 - 40493916
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||||||| |||||| ||||||||||||||  ||||| |||||||||||||||||    
T  40493862 ttatactcttaaacaactttttctataataa-aattgttgttggtgtcattaaaaa 40493916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 42516189 - 42516244
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| ||||||||||||||  ||||| |||||||||||||||||    
T  42516189 ttatacccttaaacaactttttctataataaaaattgttgttggtgtcattaaaaa 42516244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 43370134 - 43370210
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| ||||||||||||||  ||||| |||||||||||| ||||   ||||||||||||||| ||||||    
T  43370134 ttatacccttaaacaactttttctataataa-aattgttgttggtgtcatttaaaa---aagaatttagattatatttttt 43370210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 832191 - 832236
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| |||||||||||||| |||||| ||||||||||| |||||    
T  832191 aaacaactttttctataataaagattgttgttggtgtcatgaaaaa 832236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 1611559 - 1611636
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagat-aagaatttagattatct-tttttgttat 237  Q
    |||||| |||||| ||| ||| |||||| ||||||||||||||||| || || |||||||||||| | ||||||||||    
T  1611559 aaacaactttttccatattaaagattgttgttggtgtcattaaaaaaataaacaatttagattatatatttttgttat 1611636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 209
Target Start/End: Complemental strand, 12659414 - 12659357
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaaga 209  Q
    |||||| || |||||| ||||| |||||||| |||||| ||| |||||||||||||||    
T  12659414 ttatacccttaaacaactttttttataataaagattgttgttagtgtcattaaaaaga 12659357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 19650719 - 19650764
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| |||||||||||||| |||||| ||||||| |||||||||    
T  19650719 aaacaactttttctataataaagattgttgttggtgccattaaaaa 19650764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 23206845 - 23206890
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| ||||| |||||||| |||||| |||||||||||||||||    
T  23206845 aaacaactttttttataataaagattgttgttggtgtcattaaaaa 23206890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 42027719 - 42027647
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||||||| |||||| |||||||||||||| ||  || |||| ||||||||| || | |||||||||||||||    
T  42027719 ttatactcttaaacaattttttctataataaagaccgttgttgatgtcattaacaa-aaaagaatttagattat 42027647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 225
Target Start/End: Complemental strand, 1612057 - 1611982
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcatta--aaaagataagaatttagattat 225  Q
    |||||| || |||||| ||||||||| |||| |||||| | |||||||||||  |||| | |||||||||||||||    
T  1612057 ttatacccttaaacaattttttctattataaagattgttgctggtgtcattaaaaaaaaaaaagaatttagattat 1611982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 32234652 - 32234586
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| ||||||||||||||  ||||| |||||||||||||| ||   ||||||||||||||| ||||||    
T  32234652 aaacaactttttctataataaa-attgttgttggtgtcattaacaa---aagaatttagattatatttttt 32234586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 37896416 - 37896467
Alignment:
Q  180 taatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||| ||||| ||||||||||||||||| |||| |||||||||||| ||||||    
T  37896416 taataattgttgttggtgtcattaaaaa-ataaaaatttagattatatttttt 37896467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 223
Target Start/End: Original strand, 42097487 - 42097556
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatt 223  Q
    |||||| || |||||| |||||||||||||| |||||  ||||||||| ||||||  | |||||||||||||    
T  42097487 ttatacccttaaacaactttttctataataaagattgatgttggtgtcgttaaaa--aaaagaatttagatt 42097556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 29350485 - 29350555
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| ||||||||||||||||||||| |||||||||||| |||| ||||||||||| ||||| ||||||    
T  29350485 aaacaattttttctataataatgattgttgttggtgtcattgaaaatataagaatttaaattatatttttt 29350555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 30591893 - 30591972
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || ||||||||||| |||||||||||||| | |||||||| |||||||||||||||||||| ||||| ||||||    
T  30591893 ttatacccttaaacaaatttt-ctataataatgattattgttggtgtaattaaaaagataagaatttaaattatatttttt 30591972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 14662397 - 14662322
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttt-tttgttat 237  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||| ||||||||||| ||||| ||| ||||||||    
T  14662397 aacaactttttctataataaagattgttgttggtgtcattaaaaaaataagaatttatattatatttatttgttat 14662322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 23124392 - 23124479
Alignment:
Q  151 tttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat-cttttttgttat 237  Q
    ||||| |||| |||||| |||||||| ||||| |||||| ||||||||||||||||| ||||||||||| |||||  |||||||||||    
T  23124392 tttattctcttaaacaactttttctaaaataaagattgttgttggtgtcattaaaaaaataagaatttatattataattttttgttat 23124479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 19146223 - 19146158
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||||||||||||| ||||||||||| ||||||||||||   ||||||||||||||| |||||||||||    
T  19146223 tttttctataataaagattgtcgttgatgtcattaaaaa---aagaatttagattattttttttgttat 19146158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 240
Target Start/End: Complemental strand, 32333351 - 32333275
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttatttt 240  Q
    ||||| |||||| ||||||| |||||| |||||||||||| |||| ||||||||||||||||| ||||||||| ||||    
T  32333351 aacaactttttccataataaagattgttgttggtgtcattgaaaa-ataagaatttagattatattttttgttttttt 32333275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 12169962 - 12169882
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || ||| || |||||||||||||| ||| || ||||||||||||||||| |||||| |||||||||| ||||||    
T  12169962 ttataccctcaaataactttttctataataaagatcgttgttggtgtcattaaaaaaataagagtttagattatatttttt 12169882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 169 - 235
Target Start/End: Original strand, 20715849 - 20715913
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgtt 235  Q
    |||||||||||||| |||||| ||||||||||||||||  | ||||||||||||||| |||||||||    
T  20715849 tttttctataataaagattgttgttggtgtcattaaaa--aaaagaatttagattatattttttgtt 20715913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 8771776 - 8771703
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    ||||| |||||||||||||| |||| | ||||||||||||||||| | ||||||||| ||||| |||||||||||    
T  8771776 aacaattttttctataataaagattattgttggtgtcattaaaaa-aaaagaatttacattatattttttgttat 8771703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 152 - 233
Target Start/End: Original strand, 14426641 - 14426723
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaaga-taagaatttagattatcttttttg 233  Q
    ||||||||| |||||| ||||| |||||||| |||||| |||| |||||||||||| | |||||||||| ||||| |||||||    
T  14426641 ttatactcttaaacaactttttatataataaagattgttgttgatgtcattaaaaaaactaagaatttatattatattttttg 14426723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 30233299 - 30233361
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    ||||| ||||||||||| || ||| || ||||||||||||||||| |||||||||||||||||    
T  30233299 aacaattttttctataacaaagatcgttgttggtgtcattaaaaaaataagaatttagattat 30233361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 32531133 - 32531206
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||||| |||||||||||||| |||||| ||||||||||||| ||  | ||||||||||||| | |||||||||||    
T  32531133 aaacaactttttctataataaagattgttgttggtgtcattagaa--aaaagaatttagatttttttttttgttat 32531206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 152 - 237
Target Start/End: Original strand, 2485904 - 2485985
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||||| || ||||||  |||||||||||||  ||||| |||||||||||||||||   ||||||||||||||| |||||||||||    
T  2485904 ttatacccttaaacaatcttttctataataaa-attgttgttggtgtcattaaaaa---aagaatttagattatattttttgttat 2485985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 28712058 - 28712003
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| |||||||||||||| |||||| |||||||||||||||||    
T  28712058 ttatacccttaaacaactttttctataataaagattgttgttggtgtcattaaaaa 28712003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 169 - 232
Target Start/End: Complemental strand, 30254415 - 30254352
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||||||||||| |||||| ||| ||||||||||||| ||||||||||| || || ||||||    
T  30254415 tttttctataataaagattgttgtttgtgtcattaaaaaaataagaatttatatcatatttttt 30254352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 22535125 - 22535056
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| ||||||||||||||  ||||| |||||||||| |||||| | ||||||||||||||| ||||||    
T  22535125 aaacaactttttctataataaatattgttgttggtgtca-taaaaaaaaaagaatttagattatatttttt 22535056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 13629286 - 13629366
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || ||| |||||||| |||||||| |||  | ||| ||||||||||||| ||||||||||| ||||| ||||||    
T  13629286 ttatacccttaaagaaatttttttataataaagatcattgttagtgtcattaaaaaaataagaatttaaattatatttttt 13629366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 17353115 - 17353159
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||| |||||||||||||| |||||| |||||||||||||||||    
T  17353115 aacaactttttctataataaagattgttgttggtgtcattaaaaa 17353159  T

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Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 17942746 - 17942826
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    |||||| || |||||| ||||||||| |||| ||||||  |||||||||||||||| | || ||||||| |||| ||||||    
T  17942746 ttatacccttaaacaactttttctatgataaagattgttattggtgtcattaaaaaaaaaaaaatttaggttatatttttt 17942826  T

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Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 10460124 - 10460179
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| || |||||| |||||||||||||| ||| || |||||||||||||||||    
T  10460124 ttatacccttaaacaactttttctataataaagatcgttgttggtgtcattaaaaa 10460179  T

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Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 31861843 - 31861913
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattat 225  Q
    |||||| || |||||| |||||||||||||| ||| ||  ||||||||||||||||   |||||||||||||||    
T  31861843 ttatacccttaaacaactttttctataataaagatcgtttttggtgtcattaaaaa---aagaatttagattat 31861913  T

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Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 207
Target Start/End: Complemental strand, 7451777 - 7451732
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| |||||||||||||| |||||| ||||| |||||||||||    
T  7451777 aaacaactttttctataataaagattgttgttggcgtcattaaaaa 7451732  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 14965243 - 14965288
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| |||||||||||||| ||| || |||||||||||||||||    
T  14965243 aaacaactttttctataataaagatggttgttggtgtcattaaaaa 14965288  T

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Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Original strand, 33573352 - 33573416
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcatt--aaaaagataagaatttagattat 225  Q
    ||||| |||||||||||||| |||||| ||||||||| ||  ||||| | |||||||||||||||    
T  33573352 aacaattttttctataataaagattgttgttggtgtcgttaaaaaaaaaaaagaatttagattat 33573416  T

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Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 3833948 - 3833900
Alignment:
Q  159 ctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    ||||||||||||||| ||||| ||  ||||| |||||||||||||||||    
T  3833948 ctaaaacaaatttttatataagaaatattgttgttggtgtcattaaaaa 3833900  T

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Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 22535526 - 22535454
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||||| || ||||||||||| ||||||  ||||||||||||| |  | ||||||||||||||| |||||||||||    
T  22535526 aaacaatttattctataataaagattgtttttggtgtcattaaga--aaaagaatttagattat-ttttttgttat 22535454  T

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Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 179 - 232
Target Start/End: Complemental strand, 26251988 - 26251933
Alignment:
Q  179 ataatgattgtcgttggtgtcattaaaaaga--taagaatttagattatctttttt 232  Q
    |||| |||||| ||||||||||||||||| |  |||||||||||||||| ||||||    
T  26251988 ataaagattgttgttggtgtcattaaaaaaaaataagaatttagattatatttttt 26251933  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 31204127 - 31204051
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatta-tcttttttgttat 237  Q
    |||||| |||||||  ||||| |||||| || | |||||||||||| ||||||||||| |||| | |||||||||||    
T  31204127 aaacaattttttctcaaataaagattgttgtcgatgtcattaaaaatataagaatttatattattattttttgttat 31204051  T

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Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 44259 - 44335
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctt-ttttgttat 237  Q
    |||||| ||||||| |||||| |||||| ||||||||||||||||| | ||||||||||||||| || |||||||||    
T  44259 aaacaattttttctgtaataaagattgttgttggtgtcattaaaaaaacaagaatttagattatattcttttgttat 44335  T

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Target: scaffold0268 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 232
Target Start/End: Original strand, 21608 - 21672
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcatt-aaaaagataagaatttagattatctttttt 232  Q
    |||||||||||||| |||||| ||||||||| || ||||| ||||||||||||||||| ||||||    
T  21608 tttttctataataaagattgttgttggtgtcgttaaaaaaaataagaatttagattatatttttt 21672  T

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Target: scaffold0649 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0649
Description:

Target: scaffold0649; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 8490 - 8428
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttt 231  Q
    ||||||||||||||  | | | ||||||||||||||||| ||||||||||||||||| |||||    
T  8490 tttttctataataaataatattgttggtgtcattaaaaaaataagaatttagattatattttt 8428  T

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Target: scaffold0830 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0830
Description:

Target: scaffold0830; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 169 - 237
Target Start/End: Original strand, 719 - 788
Alignment:
Q  169 tttttctataataatgattgtc-gttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    ||||||||||| ||| |||||  |||||||||||||||||||||  | |||||||||| |||||||||||    
T  719 tttttctataacaataattgtttgttggtgtcattaaaaagatataattttagattattttttttgttat 788  T

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Target: scaffold0734 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 169 - 237
Target Start/End: Complemental strand, 4097 - 4028
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctt-ttttgttat 237  Q
    |||||||||||||| |||||| ||   |||||||||||| ||||||||||||||||| || |||||||||    
T  4097 tttttctataataaagattgttgtcaatgtcattaaaaaaataagaatttagattatattcttttgttat 4028  T

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Target: scaffold0118 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 14765 - 14825
Alignment:
Q  169 tttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttt 230  Q
    |||||||||||||| |||||| |||| |||||||||||| |||| |||||||||||| ||||    
T  14765 tttttctataataaagattgttgttgatgtcattaaaaa-ataaaaatttagattatatttt 14825  T

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Target: scaffold0021 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 152 - 224
Target Start/End: Complemental strand, 4053 - 3981
Alignment:
Q  152 ttatactctaaaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagatta 224  Q
    ||||||| | |||||| ||||||||||||||  |||||  ||| |||||||||||| |||| |||||||||||    
T  4053 ttatacttttaaacaactttttctataataaatattgttattgatgtcattaaaaaaataaaaatttagatta 3981  T

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Target: scaffold0137 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 163 - 232
Target Start/End: Complemental strand, 6988 - 6922
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatctttttt 232  Q
    ||||| |||||||||| ||| |||||| ||||| |||||||||||   ||||||||||||||| ||||||    
T  6988 aacaattttttctatagtaaagattgttgttggcgtcattaaaaa---aagaatttagattatatttttt 6922  T

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Target: scaffold0037 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 57109 - 57175
Alignment:
Q  170 ttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    ||||||||||||| |||||| |||  ||| |||||||| |||||| |||||||||| |||||||||||    
T  57109 ttttctataataaagattgttgttattgttattaaaaa-ataagagtttagattatattttttgttat 57175  T

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Target: scaffold0037; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 64234 - 64300
Alignment:
Q  170 ttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    ||||||||||||| |||||| |||  ||| |||||||| |||||| |||||||||| |||||||||||    
T  64234 ttttctataataaagattgttgttattgttattaaaaa-ataagagtttagattatattttttgttat 64300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 440 - 376
Alignment:
Q  163 aacaaatttttctataataatgattgtcgttggtgtcatt--aaaaagataagaatttagattat 225  Q
    ||||| |||||||||||||| |||||| ||||||||| ||  ||||| | |||||||||||||||    
T  440 aacaattttttctataataaagattgttgttggtgtcgttaaaaaaaaaaaagaatttagattat 376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 4839 - 4884
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaa 207  Q
    |||||| |||||||||||||| |||||| |||||||||| ||||||    
T  4839 aaacaattttttctataataaagattgttgttggtgtcaataaaaa 4884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 232
Target Start/End: Complemental strand, 21577 - 21508
Alignment:
Q  164 acaaatttttctataataatgattgtcgttggtgtcattaaaaaga-taagaatttagattatctttttt 232  Q
    |||| ||||||||||| ||  ||||| ||||||| ||||||||| | |||||||||||||||| ||||||    
T  21577 acaactttttctataaaaaaaattgttgttggtgccattaaaaaaaataagaatttagattatatttttt 21508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0196 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 8765 - 8693
Alignment:
Q  162 aaacaaatttttctataataatgattgtcgttggtgtcattaaaaagataagaatttagattatcttttttgttat 237  Q
    |||||| |||||||||||||| |||||| |||| | |||||||||  | || |||||||||||| |||||||||||    
T  8765 aaacaattttttctataataaagattgttgttgatttcattaaaa--aaaaaaatttagattat-ttttttgttat 8693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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