View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3448_low_3 (Length: 427)

Name: NF3448_low_3
Description: NF3448
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3448_low_3
NF3448_low_3
[»] chr3 (65 HSPs)
chr3 (22-412)||(1901961-1902352)
chr3 (22-412)||(1911407-1911798)
chr3 (71-328)||(35864077-35864334)
chr3 (122-386)||(21984209-21984474)
chr3 (155-305)||(11027175-11027325)
chr3 (113-314)||(7729708-7729908)
chr3 (84-394)||(10480326-10480639)
chr3 (143-280)||(31339880-31340017)
chr3 (187-358)||(54393254-54393428)
chr3 (196-338)||(52259689-52259831)
chr3 (69-166)||(44441778-44441875)
chr3 (296-394)||(44441600-44441699)
chr3 (181-299)||(49600729-49600847)
chr3 (196-299)||(34962274-34962377)
chr3 (22-58)||(7867746-7867782)
chr3 (22-58)||(14957836-14957872)
chr3 (22-58)||(18169157-18169193)
chr3 (22-58)||(20380924-20380960)
chr3 (22-58)||(38944176-38944212)
chr3 (22-58)||(48945847-48945883)
chr3 (22-58)||(51464307-51464343)
chr3 (28-58)||(29800590-29800620)
chr3 (24-58)||(35272027-35272061)
chr3 (25-58)||(108431-108464)
chr3 (25-58)||(5398918-5398951)
chr3 (25-58)||(12792638-12792671)
chr3 (25-58)||(20215948-20215981)
chr3 (22-55)||(31997816-31997849)
chr3 (25-58)||(34607958-34607991)
chr3 (22-55)||(34733326-34733359)
chr3 (238-299)||(44111249-44111310)
chr3 (25-58)||(45205288-45205321)
chr3 (22-58)||(462436-462472)
chr3 (22-58)||(1295332-1295368)
chr3 (22-58)||(3069609-3069645)
chr3 (22-58)||(3483132-3483168)
chr3 (22-58)||(7294135-7294171)
chr3 (22-58)||(8254027-8254063)
chr3 (22-58)||(9027873-9027909)
chr3 (22-58)||(11173458-11173494)
chr3 (22-58)||(11327108-11327144)
chr3 (22-58)||(20714243-20714279)
chr3 (22-58)||(22813072-22813108)
chr3 (22-58)||(24537219-24537255)
chr3 (22-58)||(26279884-26279920)
chr3 (22-58)||(28300683-28300719)
chr3 (22-58)||(30400191-30400227)
chr3 (22-58)||(30796649-30796685)
chr3 (22-58)||(32457790-32457826)
chr3 (22-58)||(32931953-32931989)
chr3 (22-58)||(34271525-34271561)
chr3 (22-58)||(36818956-36818992)
chr3 (26-58)||(41877650-41877682)
chr3 (22-58)||(43169777-43169813)
chr3 (22-58)||(44855251-44855287)
chr3 (22-58)||(45528977-45529013)
chr3 (22-58)||(46315990-46316026)
chr3 (22-58)||(46473128-46473164)
chr3 (22-58)||(47683801-47683837)
chr3 (22-58)||(48405410-48405446)
chr3 (22-58)||(49196696-49196732)
chr3 (22-58)||(50294147-50294183)
chr3 (22-58)||(50559247-50559283)
chr3 (22-58)||(50879595-50879631)
chr3 (22-58)||(51672863-51672899)
[»] chr2 (40 HSPs)
chr2 (74-358)||(28528939-28529223)
chr2 (71-314)||(44718840-44719081)
chr2 (138-270)||(42530893-42531033)
chr2 (67-166)||(42071527-42071626)
chr2 (242-314)||(42071417-42071489)
chr2 (23-58)||(21490703-21490738)
chr2 (220-341)||(21490265-21490384)
chr2 (22-58)||(4738607-4738643)
chr2 (22-58)||(5067681-5067717)
chr2 (22-58)||(14140372-14140408)
chr2 (22-58)||(30856807-30856843)
chr2 (22-58)||(31629604-31629640)
chr2 (22-58)||(33296106-33296142)
chr2 (22-58)||(36435681-36435717)
chr2 (23-58)||(42283275-42283310)
chr2 (222-299)||(7813549-7813624)
chr2 (181-294)||(947379-947492)
chr2 (25-58)||(5167780-5167813)
chr2 (25-58)||(6365186-6365219)
chr2 (25-58)||(15283288-15283321)
chr2 (25-58)||(36132974-36133007)
chr2 (25-58)||(41040266-41040299)
chr2 (22-58)||(3091741-3091777)
chr2 (22-58)||(4036911-4036947)
chr2 (22-58)||(6884910-6884946)
chr2 (22-58)||(8482256-8482292)
chr2 (22-58)||(11229356-11229392)
chr2 (22-58)||(14891113-14891149)
chr2 (22-58)||(22303203-22303239)
chr2 (22-58)||(24727625-24727661)
chr2 (22-58)||(25507255-25507291)
chr2 (22-58)||(25801837-25801873)
chr2 (22-58)||(29795447-29795483)
chr2 (22-58)||(29893610-29893646)
chr2 (22-58)||(30487504-30487540)
chr2 (22-58)||(36909878-36909914)
chr2 (22-58)||(37966367-37966403)
chr2 (22-58)||(43725216-43725252)
chr2 (22-58)||(44189827-44189863)
chr2 (22-58)||(45376256-45376292)
[»] chr6 (25 HSPs)
chr6 (83-355)||(6822518-6822790)
chr6 (69-212)||(11769760-11769903)
chr6 (115-292)||(18250755-18250933)
chr6 (237-336)||(33106823-33106920)
chr6 (69-185)||(33106707-33106823)
chr6 (181-336)||(6901536-6901697)
chr6 (22-58)||(12441538-12441574)
chr6 (22-58)||(27334858-27334894)
chr6 (22-58)||(27395598-27395634)
chr6 (22-58)||(32457287-32457323)
chr6 (22-57)||(6435037-6435072)
chr6 (22-55)||(28549045-28549078)
chr6 (25-58)||(30796113-30796146)
chr6 (22-58)||(1897697-1897733)
chr6 (22-58)||(2056783-2056819)
chr6 (22-58)||(3339534-3339570)
chr6 (22-58)||(9954548-9954584)
chr6 (22-58)||(10521126-10521162)
chr6 (22-58)||(12177577-12177613)
chr6 (22-58)||(29383557-29383593)
chr6 (22-58)||(31517204-31517240)
chr6 (22-58)||(31883339-31883375)
chr6 (22-58)||(32149500-32149536)
chr6 (22-58)||(32644623-32644659)
chr6 (22-58)||(33527435-33527471)
[»] chr5 (52 HSPs)
chr5 (69-394)||(15810665-15810991)
chr5 (69-394)||(15726821-15727146)
chr5 (122-386)||(29368448-29368713)
chr5 (83-285)||(4930660-4930861)
chr5 (241-394)||(22399404-22399557)
chr5 (22-58)||(125092-125128)
chr5 (245-295)||(17229004-17229054)
chr5 (157-199)||(38351726-38351768)
chr5 (138-199)||(17228914-17228975)
chr5 (22-58)||(1774318-1774354)
chr5 (22-58)||(6865811-6865847)
chr5 (22-58)||(19127124-19127160)
chr5 (22-58)||(23991169-23991205)
chr5 (262-306)||(27343174-27343218)
chr5 (22-58)||(28811429-28811465)
chr5 (22-54)||(29227721-29227753)
chr5 (22-58)||(34381012-34381048)
chr5 (22-58)||(36713213-36713249)
chr5 (22-58)||(39595272-39595308)
chr5 (23-58)||(14508193-14508228)
chr5 (22-56)||(12910786-12910820)
chr5 (272-314)||(40909995-40910037)
chr5 (22-55)||(4098626-4098659)
chr5 (22-55)||(33567247-33567280)
chr5 (22-58)||(3263543-3263579)
chr5 (22-58)||(4800537-4800573)
chr5 (22-58)||(4954466-4954502)
chr5 (22-58)||(5130402-5130438)
chr5 (22-58)||(8728616-8728652)
chr5 (22-58)||(8959160-8959196)
chr5 (22-58)||(9594478-9594514)
chr5 (22-58)||(9599763-9599799)
chr5 (22-58)||(11768025-11768061)
chr5 (22-58)||(12718415-12718451)
chr5 (22-58)||(12779641-12779677)
chr5 (22-58)||(13734384-13734420)
chr5 (22-58)||(14780456-14780492)
chr5 (22-58)||(14914372-14914408)
chr5 (22-58)||(15918025-15918061)
chr5 (22-58)||(16143390-16143426)
chr5 (22-58)||(19376167-19376203)
chr5 (22-58)||(28903991-28904027)
chr5 (22-58)||(28940386-28940422)
chr5 (22-58)||(29803225-29803261)
chr5 (22-58)||(30574412-30574448)
chr5 (22-58)||(30838400-30838436)
chr5 (22-58)||(34428160-34428196)
chr5 (22-58)||(36572691-36572727)
chr5 (22-58)||(40223820-40223856)
chr5 (22-58)||(41621963-41621999)
chr5 (22-58)||(42699057-42699093)
chr5 (22-58)||(43057435-43057471)
[»] chr8 (43 HSPs)
chr8 (138-346)||(40381594-40381802)
chr8 (152-381)||(42163974-42164204)
chr8 (110-390)||(3310494-3310775)
chr8 (69-270)||(14539388-14539589)
chr8 (143-358)||(37728356-37728571)
chr8 (303-394)||(1336109-1336201)
chr8 (227-299)||(2537200-2537272)
chr8 (181-336)||(12585655-12585810)
chr8 (83-166)||(1336280-1336363)
chr8 (232-394)||(16340159-16340319)
chr8 (25-58)||(6004944-6004977)
chr8 (22-58)||(1796496-1796532)
chr8 (22-58)||(5502371-5502407)
chr8 (22-58)||(12732842-12732878)
chr8 (22-58)||(22852874-22852910)
chr8 (22-58)||(28927681-28927717)
chr8 (22-58)||(36497661-36497697)
chr8 (22-58)||(45101396-45101432)
chr8 (192-294)||(15356060-15356162)
chr8 (22-55)||(11138910-11138943)
chr8 (22-55)||(27836183-27836216)
chr8 (25-58)||(42047335-42047368)
chr8 (25-58)||(43419879-43419912)
chr8 (22-58)||(1065417-1065453)
chr8 (22-58)||(1370309-1370345)
chr8 (22-58)||(5740809-5740845)
chr8 (22-58)||(7596926-7596962)
chr8 (22-58)||(7678732-7678768)
chr8 (22-58)||(8143244-8143280)
chr8 (22-58)||(9047094-9047130)
chr8 (22-58)||(13267121-13267157)
chr8 (22-58)||(20288533-20288569)
chr8 (22-58)||(21075162-21075198)
chr8 (22-58)||(21273745-21273781)
chr8 (22-58)||(26629145-26629181)
chr8 (22-58)||(30170764-30170800)
chr8 (22-58)||(37524452-37524488)
chr8 (22-58)||(37562176-37562212)
chr8 (22-58)||(38844825-38844861)
chr8 (69-105)||(40381827-40381863)
chr8 (22-58)||(40413373-40413409)
chr8 (22-58)||(40842014-40842050)
chr8 (22-58)||(41746820-41746856)
[»] chr1 (54 HSPs)
chr1 (83-394)||(27850394-27850707)
chr1 (120-350)||(30294091-30294321)
chr1 (73-297)||(21487306-21487530)
chr1 (220-327)||(37244915-37245022)
chr1 (296-394)||(46396620-46396719)
chr1 (69-166)||(46396444-46396541)
chr1 (185-256)||(5200333-5200404)
chr1 (69-172)||(42773370-42773473)
chr1 (293-394)||(1282175-1282277)
chr1 (293-394)||(1283206-1283308)
chr1 (239-299)||(29095842-29095902)
chr1 (83-172)||(37245038-37245128)
chr1 (24-58)||(10384211-10384245)
chr1 (232-269)||(42772340-42772377)
chr1 (22-58)||(5309075-5309111)
chr1 (22-58)||(6829818-6829854)
chr1 (22-58)||(7503470-7503506)
chr1 (22-58)||(8391362-8391398)
chr1 (22-58)||(18610773-18610809)
chr1 (22-58)||(29293959-29293995)
chr1 (22-58)||(32821635-32821671)
chr1 (22-58)||(37843467-37843503)
chr1 (22-58)||(45740579-45740615)
chr1 (22-58)||(49425738-49425774)
chr1 (22-58)||(49453491-49453527)
chr1 (22-58)||(50226914-50226950)
chr1 (180-247)||(42772392-42772459)
chr1 (24-58)||(25302680-25302714)
chr1 (187-260)||(1282281-1282354)
chr1 (69-166)||(1282356-1282452)
chr1 (187-260)||(1283312-1283385)
chr1 (69-166)||(1283387-1283483)
chr1 (22-55)||(5477187-5477220)
chr1 (24-57)||(9882696-9882729)
chr1 (25-58)||(31427995-31428028)
chr1 (218-299)||(31570500-31570581)
chr1 (22-58)||(7078535-7078571)
chr1 (22-58)||(8934631-8934667)
chr1 (22-58)||(9011645-9011681)
chr1 (22-58)||(13813558-13813594)
chr1 (22-58)||(15061845-15061881)
chr1 (22-58)||(16658438-16658474)
chr1 (22-58)||(25098823-25098859)
chr1 (22-58)||(26585208-26585244)
chr1 (22-58)||(27687543-27687579)
chr1 (22-58)||(29264015-29264051)
chr1 (25-57)||(32966268-32966300)
chr1 (22-58)||(40596078-40596114)
chr1 (22-58)||(40612114-40612150)
chr1 (22-58)||(41507218-41507254)
chr1 (22-58)||(42256460-42256496)
chr1 (22-58)||(45272184-45272220)
chr1 (22-58)||(48872379-48872415)
chr1 (22-58)||(48872985-48873021)
[»] chr7 (38 HSPs)
chr7 (69-385)||(23756472-23756791)
chr7 (181-336)||(22972847-22973002)
chr7 (182-299)||(33758395-33758512)
chr7 (22-58)||(2469703-2469739)
chr7 (22-58)||(22330655-22330691)
chr7 (26-58)||(27778079-27778111)
chr7 (22-58)||(37352014-37352050)
chr7 (22-58)||(41077535-41077571)
chr7 (22-58)||(45607024-45607060)
chr7 (23-58)||(37832450-37832485)
chr7 (22-56)||(28596908-28596942)
chr7 (22-56)||(32154571-32154605)
chr7 (237-294)||(33338293-33338348)
chr7 (80-134)||(46232378-46232432)
chr7 (22-55)||(23680062-23680095)
chr7 (25-58)||(31982057-31982090)
chr7 (25-58)||(41966332-41966365)
chr7 (22-58)||(156017-156053)
chr7 (22-58)||(1814342-1814378)
chr7 (22-58)||(2347094-2347130)
chr7 (22-58)||(4971290-4971326)
chr7 (22-58)||(7212702-7212738)
chr7 (22-58)||(10591155-10591191)
chr7 (22-58)||(19426580-19426616)
chr7 (22-58)||(25887594-25887630)
chr7 (22-58)||(26153646-26153682)
chr7 (22-58)||(27688648-27688684)
chr7 (22-58)||(28109957-28109993)
chr7 (22-58)||(28824503-28824539)
chr7 (22-58)||(30864452-30864488)
chr7 (22-58)||(31274564-31274600)
chr7 (22-58)||(33050183-33050219)
chr7 (22-58)||(37856189-37856225)
chr7 (22-58)||(40693563-40693599)
chr7 (22-58)||(43444635-43444671)
chr7 (22-58)||(48395248-48395284)
chr7 (22-58)||(48866965-48867001)
chr7 (22-58)||(49069249-49069285)
[»] chr4 (70 HSPs)
chr4 (69-288)||(13035532-13035747)
chr4 (83-358)||(22087635-22087913)
chr4 (187-391)||(47551993-47552200)
chr4 (196-299)||(46732653-46732755)
chr4 (192-338)||(27907223-27907367)
chr4 (296-390)||(26333241-26333336)
chr4 (148-212)||(35747008-35747072)
chr4 (72-166)||(47551897-47551991)
chr4 (181-394)||(13028605-13028815)
chr4 (22-58)||(51039151-51039187)
chr4 (215-298)||(24368009-24368092)
chr4 (22-58)||(4896535-4896571)
chr4 (22-58)||(6370980-6371016)
chr4 (22-58)||(11064124-11064160)
chr4 (22-58)||(11997685-11997721)
chr4 (22-58)||(15596396-15596432)
chr4 (22-58)||(22257231-22257267)
chr4 (22-58)||(26885291-26885327)
chr4 (22-58)||(33093139-33093175)
chr4 (22-58)||(34116575-34116611)
chr4 (22-58)||(35017153-35017189)
chr4 (22-58)||(37547065-37547101)
chr4 (22-58)||(41119505-41119541)
chr4 (22-58)||(46173550-46173586)
chr4 (22-58)||(47014939-47014975)
chr4 (69-167)||(13028978-13029076)
chr4 (25-58)||(940297-940330)
chr4 (231-297)||(6495746-6495814)
chr4 (25-58)||(12638825-12638858)
chr4 (25-58)||(26440676-26440709)
chr4 (22-55)||(48326555-48326588)
chr4 (22-58)||(169537-169573)
chr4 (22-58)||(1031755-1031791)
chr4 (22-58)||(1796366-1796402)
chr4 (22-58)||(5208362-5208398)
chr4 (22-58)||(6290462-6290498)
chr4 (22-58)||(6953423-6953459)
chr4 (22-58)||(7037519-7037555)
chr4 (22-58)||(8455861-8455897)
chr4 (22-58)||(23347775-23347811)
chr4 (22-58)||(27001444-27001480)
chr4 (22-58)||(30042134-30042170)
chr4 (22-58)||(30973597-30973633)
chr4 (22-58)||(31240648-31240684)
chr4 (22-58)||(32365691-32365727)
chr4 (22-58)||(33278675-33278711)
chr4 (22-58)||(38864771-38864807)
chr4 (22-58)||(39010172-39010208)
chr4 (22-58)||(39241325-39241361)
chr4 (26-58)||(40409205-40409237)
chr4 (22-58)||(41262653-41262689)
chr4 (22-58)||(41495013-41495049)
chr4 (22-58)||(42490920-42490956)
chr4 (22-58)||(42815404-42815440)
chr4 (22-58)||(42853939-42853975)
chr4 (22-58)||(44272845-44272881)
chr4 (22-58)||(46566929-46566965)
chr4 (22-58)||(46794536-46794572)
chr4 (22-58)||(48099811-48099847)
chr4 (22-58)||(50831791-50831827)
chr4 (22-58)||(51318703-51318739)
chr4 (22-58)||(51359825-51359861)
chr4 (22-58)||(51377328-51377364)
chr4 (22-58)||(51389109-51389145)
chr4 (22-58)||(51717317-51717353)
chr4 (22-58)||(52392260-52392296)
chr4 (22-58)||(54036553-54036589)
chr4 (22-58)||(54800998-54801034)
chr4 (22-58)||(55268036-55268072)
chr4 (22-58)||(56215605-56215641)
[»] scaffold0245 (3 HSPs)
scaffold0245 (293-394)||(7855-7957)
scaffold0245 (187-260)||(7961-8034)
scaffold0245 (69-166)||(8036-8132)
[»] scaffold0229 (3 HSPs)
scaffold0229 (293-394)||(8183-8285)
scaffold0229 (187-260)||(8289-8362)
scaffold0229 (69-166)||(8364-8460)
[»] scaffold0662 (1 HSPs)
scaffold0662 (22-58)||(1078-1114)
[»] scaffold0508 (1 HSPs)
scaffold0508 (22-58)||(11571-11607)
[»] scaffold0154 (1 HSPs)
scaffold0154 (22-58)||(19726-19762)
[»] scaffold0026 (1 HSPs)
scaffold0026 (22-58)||(113625-113661)
[»] scaffold0011 (1 HSPs)
scaffold0011 (22-58)||(219699-219735)
[»] scaffold0002 (1 HSPs)
scaffold0002 (22-58)||(440718-440754)
[»] scaffold0131 (1 HSPs)
scaffold0131 (22-57)||(15569-15604)
[»] scaffold0018 (1 HSPs)
scaffold0018 (28-58)||(36002-36032)


Alignment Details
Target: chr3 (Bit Score: 336; Significance: 0; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 22 - 412
Target Start/End: Original strand, 1901961 - 1902352
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctcnnnnnnnnaatagtataatgcactaatagttgatattttgatcacatggcccccacttatcat 121  Q
    ||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1901961 aagttgtcacaaagtggttgtacaaatatcatttctcttttttttaatagtataatgcactaatagttgatattttgatcacatggcccccacttatcat 1902060  T
Q  122 aaatcatttctctttcggcctacacatatcatcatatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaag 221  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1902061 aaatcatttctcttttggtctacacatatcatcatatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaag 1902160  T
Q  222 atgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagaaaatcattctaagtttccataataggaaaaa 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1902161 atgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagaaaatcattctaagtttccataataggaaaaa 1902260  T
Q  322 tcataaaggacaattattattgctataaatttttataaat-gtgcacccactattcaaaaatcctggatccgtctctgttaatatcaaacat 412  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  1902261 tcataaaggacaattattattgctataaatttttatatatggtgcacccactattcaaaaatcctggatccttctctgttaatatccaacat 1902352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 22 - 412
Target Start/End: Original strand, 1911407 - 1911798
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctcnnnnnnnnaatagtataatgcactaatagttgatattttgatcacatggcccccacttatcat 121  Q
    ||||||||||||||| |||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1911407 aagttgtcacaaagtggttgtacaaatatcatttctcttttttttaatagtataatgcactaatagttgatattttgatcacatggcccccacttatcat 1911506  T
Q  122 aaatcatttctctttcggcctacacatatcatcatatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaag 221  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1911507 aaatcatttctcttttggtctacacatatcatcatatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaag 1911606  T
Q  222 atgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagaaaatcattctaagtttccataataggaaaaa 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1911607 atgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagaaaatcattctaagtttccataataggaaaaa 1911706  T
Q  322 tcataaaggacaattattattgctataaatttttataaat-gtgcacccactattcaaaaatcctggatccgtctctgttaatatcaaacat 412  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  1911707 tcataaaggacaattattattgctataaatttttatatatggtgcacccactattcaaaaatcctggatccttctctgttaatatccaacat 1911798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 71 - 328
Target Start/End: Original strand, 35864077 - 35864334
Alignment:
Q  71 gtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaattct 170  Q
    |||||||| |||||||||||||||||| | ||||| |||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  35864077 gtataatgtactaatagttgatatttttaccacattgccctcacttatcacaaatcatttctcttttggcctacacatatcatcatatatctcaaattct 35864176  T
Q  171 ttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagata-ttt 269  Q
    ||||| | ||||||||| ||||||||| | | |||||||||  ||||| ||||||| |||||||| ||||||||||| |||||||||||||||||| ||     
T  35864177 ttcttgataatatgaattttatcaagatttgaatgcgaaattgaatgagagatgatcggttaaatgattgtttagttgtttatatagagaaagatacttc 35864276  T
Q  270 tcattgatattgaaaatgagaaaatcattctaagtttccataataggaaaaatcataaa 328  Q
    || ||| |||||||||| | |||||||||  |||||||||||||| |||||||||||||    
T  35864277 tccttg-tattgaaaataaaaaaatcattgaaagtttccataatatgaaaaatcataaa 35864334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 122 - 386
Target Start/End: Original strand, 21984209 - 21984474
Alignment:
Q  122 aaatcatttctctttcggcctacacatatcatcatatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaag 221  Q
    ||||||||||||| | |||  ||| |||||||||||||||||||||||||| || | |||||||||||||||||||| ||||| |  |||| ||||  ||    
T  21984209 aaatcatttctctcttggctcacatatatcatcatatatctcaaattctttattgataatatgaatattatcaagaaccggatacataatcgaatgtgag 21984308  T
Q  222 atgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagaaaatcattctaagtttccataataggaaaaa 321  Q
    ||||| |||||||| ||||||   ||||||||||| ||||| ||| ||| |||||||||||||||||||||| ||||| ||||||| |||||| ||||||    
T  21984309 atgatcggttaaatgattgttcgattatttatataaagaaatatacttttattgatattgaaaatgagaaaaccattcaaagtttcaataatatgaaaaa 21984408  T
Q  322 tcataaaggacaattattattgctataaatttttataaatg-tgcacccactattcaaaaatcctg 386  Q
    |  || ||||||||||||| ||||| ||||||||||| ||| ||| |||| || ||||||||||||    
T  21984409 ttctagaggacaattattaatgctacaaatttttatatatgatgcccccaataatcaaaaatcctg 21984474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 155 - 305
Target Start/End: Original strand, 11027175 - 11027325
Alignment:
Q  155 atatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttata 254  Q
    ||||||||||| || |||||| | ||||||||||||||||||||||| ||| |||||| ||||| |||||| || |||||| ||| ||||||||||||||    
T  11027175 atatatctcaacttttttcttcataatatgaatattatcaagaatcgaatgtgaaatcgaatgagagatgactgcttaaataattatttagttatttata 11027274  T
Q  255 tagagaaagatattttcattgatattgaaaatgagaaaatcattctaagtt 305  Q
    ||| | |||||||||| ||||||||||||||||| |||||||||| |||||    
T  11027275 tagtgtaagatatttttattgatattgaaaatgataaaatcattcaaagtt 11027325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 113 - 314
Target Start/End: Original strand, 7729708 - 7729908
Alignment:
Q  113 acttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatc 212  Q
    |||||||| |||| |||||||| | || | |||| |||||||||||| ||||| |  |||||| | ||||||||||||||||||||| | |||| |||||    
T  7729708 acttatcacaaattatttctctcttgggccacacctatcatcatatagctcaattcatttcttgataatatgaatattatcaagaatagaatgcaaaatc 7729807  T
Q  213 aaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagaaaatcattctaagtttccataa 312  Q
     | ||  ||||     ||||||| |||||||| ||||||||||||||||| ||||||| |||||||||||||||||| ||||||||| || |||||||||    
T  7729808 gagtgggagatatcaagttaaatgattgtttaattatttatatagagaaatatatttttattgatattgaaaatgag-aaatcattcaaaatttccataa 7729906  T
Q  313 ta 314  Q
    ||    
T  7729907 ta 7729908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 84 - 394
Target Start/End: Complemental strand, 10480639 - 10480326
Alignment:
Q  84 atagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaattctttcttaaaaatat 183  Q
    |||||||| ||||||| ||||||  || ||||||||| | ||||||| ||| | ||| ||||  ||| ||||||||| |||||| ||||||| | |||||    
T  10480639 atagttgacattttgaccacatgatccacacttatcacatatcatttttctcttggcgtacatctatgatcatatatttcaaatcctttcttgataatat 10480540  T
Q  184 gaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaa 283  Q
    | |||||||||||||||  |||  ||||| | ||| | ||||  | |||||| |||||||||||||||||||||||||| |  |||| |||||||| |||    
T  10480539 gcatattatcaagaatcaaatgtcaaatcgactgagaaatgaccgtttaaatgattgtttagttatttatatagagaaaaaggttttaattgatatcgaa 10480440  T
Q  284 aatgag-aaaatcattctaagtttccataata-ggaaaaatcataaaggacaattattattgctataaatttttataaat-gtgcacccactattcaaaa 380  Q
    |||| | ||||| |||| |||||| ||||| | | |||||||||| | |  |||||||| |  |  ||||||||||| || ||||  |||||||||||||    
T  10480439 aatgcgaaaaataattcaaagttttcataaaatgaaaaaatcatagaagttaattattactatttcaaatttttatatatggtgcctccactattcaaaa 10480340  T
Q  381 atcctggatccgtc 394  Q
    ||| || |||||||    
T  10480339 atcatgaatccgtc 10480326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 143 - 280
Target Start/End: Original strand, 31339880 - 31340017
Alignment:
Q  143 acacatatcatcatatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtt 242  Q
    ||||||||||||||||||||||||||||||||  | ||||||||||||||||| ||||  |||||||||    ||| | |||||  ||||||| ||||||    
T  31339880 acacatatcatcatatatctcaaattctttctcgataatatgaatattatcaataatcaaatgcgaaattgtgtgagaaatgatcagttaaatgattgtt 31339979  T
Q  243 tagttatttatatagagaaagatattttcattgatatt 280  Q
    |||||| |||||| |||||||||||||| |||||||||    
T  31339980 tagttaattatattgagaaagatatttttattgatatt 31340017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 187 - 358
Target Start/End: Original strand, 54393254 - 54393428
Alignment:
Q  187 tattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaaga---tattttcattgatattgaa 283  Q
    |||||| |||| | |||| ||||||||| |   ||||||  |||||||| |||||||||||||||||||||| |||     | |||| ||||||||||||    
T  54393254 tattattaagatttggatacgaaatcaagtcggagatgaccggttaaataattgtttagttatttatatagataaaatgtttttttttattgatattgaa 54393353  T
Q  284 aatgagaaaatcattctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttata 358  Q
    |||||||||||||||| |||||||||||||| ||| |||| || ||||||||| ||| ||||| |||||||||||    
T  54393354 aatgagaaaatcattcaaagtttccataatatgaataatcgtagaggacaatttttaatgctacaaatttttata 54393428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 196 - 338
Target Start/End: Original strand, 52259689 - 52259831
Alignment:
Q  196 gaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagaaaatc 295  Q
    ||||||||||||||||| ||||  |||||| ||||||||| ||||||| ||| ||||||| |||  || |||||| ||||||||||| ||||||||||||    
T  52259689 gaatcggatgcgaaatcgaatgggagatgactggttaaatgattgtttggttgtttatatggagggaggtatttttattgatattgagaatgagaaaatc 52259788  T
Q  296 attctaagtttccataataggaaaaatcataaaggacaattat 338  Q
    |||| | ||||| | ||||  ||| ||| || |||||||||||    
T  52259789 attcaatgtttctagaatataaaacatcgtagaggacaattat 52259831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 44441875 - 44441778
Alignment:
Q  69 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaa 166  Q
    |||||||||| |  ||||||||| |||||||||||||||  | ||||||||| ||||||||||||| | |||  |||| |||||||||||||||||||    
T  44441875 tagtataatgtatcaatagttgacattttgatcacatggatcacacttatcacaaatcatttctctcttggcgcacacttatcatcatatatctcaaa 44441778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 296 - 394
Target Start/End: Complemental strand, 44441699 - 44441600
Alignment:
Q  296 attctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttataaat-gtgcacccactattcaaaaatcctggatccgtc 394  Q
    |||| ||||||| |||||| ||| |||| || ||||||||||||| | ||| ||||||||||| || ||||  |||||||||||||||||||||||||||    
T  44441699 attcaaagtttcaataatatgaataatcgtagaggacaattattaatactacaaatttttatatatagtgcctccactattcaaaaatcctggatccgtc 44441600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 181 - 299
Target Start/End: Complemental strand, 49600847 - 49600729
Alignment:
Q  181 tatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatatt 280  Q
    |||||| |||||||||| || | ||||||||| ||||   ||| | |||||| || ||||| |||||| ||||||||| | ||| ||||| ||||| |||    
T  49600847 tatgaagattatcaagactcagttgcgaaatcgaatgggtgattaatggttagatgattgtctagttacttatatagaaagagagatttttattgagatt 49600748  T
Q  281 gaaaatgagaaaatcattc 299  Q
    |||||||||||||||||||    
T  49600747 gaaaatgagaaaatcattc 49600729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 196 - 299
Target Start/End: Complemental strand, 34962377 - 34962274
Alignment:
Q  196 gaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagata-ttttcattgatattgaaaatgagaaaat 294  Q
    ||||| |||| |||||| |||| || |||| || |||||| ||||||||||||||||||||||   ||||| |||| |||||||||||||| ||||||||    
T  34962377 gaatcagatgtgaaatcgaatggaaaatgactg-ttaaatgattgtttagttatttatatagaatgagatactttttattgatattgaaaacgagaaaat 34962279  T
Q  295 cattc 299  Q
    |||||    
T  34962278 cattc 34962274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 7867746 - 7867782
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| |||||||||||||||||||||||    
T  7867746 aagttgtcacaaaatagttgtacaaatatcatttctc 7867782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 14957872 - 14957836
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  14957872 aagttgtcacaaagtggttgtacaaatatcatttctc 14957836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 18169193 - 18169157
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  18169193 aagttgtcacaaagtggttgtacaaatatcatttctc 18169157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 20380924 - 20380960
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  20380924 aagttgtcacaaagtggttgtacaaatatcatttctc 20380960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 38944176 - 38944212
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| |||||||||||||||||||||||    
T  38944176 aagttgtcacaaattagttgtacaaatatcatttctc 38944212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 48945883 - 48945847
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  48945883 aagttgtcacaaagtggttgtacaaatatcatttctc 48945847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 51464307 - 51464343
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  51464307 aagttgtcacaaagtggttgtacaaatatcatttctc 51464343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 58
Target Start/End: Original strand, 29800590 - 29800620
Alignment:
Q  28 tcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||||||||||||||||||||||    
T  29800590 tcacaaagtagttgtacaaatatcatttctc 29800620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 58
Target Start/End: Complemental strand, 35272061 - 35272027
Alignment:
Q  24 gttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| |||||||||||||||||||||    
T  35272061 gttgtcacaaagtggttgtacaaatatcatttctc 35272027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 108464 - 108431
Alignment:
Q  25 ttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||| |||||||||||||||||||||    
T  108464 ttgtcacaaagtggttgtacaaatatcatttctc 108431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 5398951 - 5398918
Alignment:
Q  25 ttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||| |||||||||||||||||||||    
T  5398951 ttgtcacaaagtggttgtacaaatatcatttctc 5398918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 12792671 - 12792638
Alignment:
Q  25 ttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||| |||||||||||||||||||||    
T  12792671 ttgtcacaaagtggttgtacaaatatcatttctc 12792638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 20215981 - 20215948
Alignment:
Q  25 ttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||| |||||||||||||||||||||    
T  20215981 ttgtcacaaagtggttgtacaaatatcatttctc 20215948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Complemental strand, 31997849 - 31997816
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcattt 55  Q
    ||||||||||||||| ||||||||||||||||||    
T  31997849 aagttgtcacaaagtggttgtacaaatatcattt 31997816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 34607958 - 34607991
Alignment:
Q  25 ttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||| |||||||||||||||||||||    
T  34607958 ttgtcacaaagtggttgtacaaatatcatttctc 34607991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 34733326 - 34733359
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcattt 55  Q
    ||||||||||||||| ||||||||||||||||||    
T  34733326 aagttgtcacaaagtggttgtacaaatatcattt 34733359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 299
Target Start/End: Complemental strand, 44111310 - 44111249
Alignment:
Q  238 ttgtttagttatttatatagagaaagatattttcattgatattgaaaatgagaaaatcattc 299  Q
    ||||||||||| |||||||||||  |||||||| ||||| || |||||||| ||||| ||||    
T  44111310 ttgtttagttacttatatagagagtgatatttttattgagatcgaaaatgaaaaaattattc 44111249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 45205321 - 45205288
Alignment:
Q  25 ttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||| |||||||||||||||||||||||    
T  45205321 ttgtcacaaaatagttgtacaaatatcatttctc 45205288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 462436 - 462472
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  462436 aagttgtcacaaaatggttgtacaaatatcatttctc 462472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 1295368 - 1295332
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  1295368 aagttatcacaaaatagttgtacaaatatcatttctc 1295332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 3069609 - 3069645
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  3069609 aagttgtcacaaattggttgtacaaatatcatttctc 3069645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 3483168 - 3483132
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||| |||||||||| |||||||||||||||||||||    
T  3483168 aagtcgtcacaaagtggttgtacaaatatcatttctc 3483132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 7294135 - 7294171
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| | |||||||||||||||||||    
T  7294135 aagttgtcacaaagtggatgtacaaatatcatttctc 7294171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 8254063 - 8254027
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  8254063 aagttgtcacaaaatggttgtacaaatatcatttctc 8254027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 9027909 - 9027873
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  9027909 aagttatcacaaagtggttgtacaaatatcatttctc 9027873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 11173494 - 11173458
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  11173494 aagttgtcacaaagtggttgtacaaatatcaattctc 11173458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 11327144 - 11327108
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  11327144 aagttgtcacaaaatggttgtacaaatatcatttctc 11327108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 20714279 - 20714243
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  20714279 aagttgtcacaaattggttgtacaaatatcatttctc 20714243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 22813108 - 22813072
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  22813108 aagttgtcagaaagtggttgtacaaatatcatttctc 22813072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 24537255 - 24537219
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| | |||||||||||||||||||    
T  24537255 aagttgtcacaaagtggatgtacaaatatcatttctc 24537219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 26279920 - 26279884
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  26279920 aagttgtcagaaagtggttgtacaaatatcatttctc 26279884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 28300683 - 28300719
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  28300683 aagttgtcataaagtggttgtacaaatatcatttctc 28300719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 30400191 - 30400227
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  30400191 aagttgtcacaaatttgttgtacaaatatcatttctc 30400227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 30796649 - 30796685
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  30796649 aagttgtcacaaagtggttgtgcaaatatcatttctc 30796685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 32457790 - 32457826
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  32457790 aagttgtcaaaaagtggttgtacaaatatcatttctc 32457826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 32931953 - 32931989
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  32931953 aagttgtcacaaattggttgtacaaatatcatttctc 32931989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 34271525 - 34271561
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  34271525 aagttgttacaaagtggttgtacaaatatcatttctc 34271561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 36818992 - 36818956
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  36818992 aagttgtcacaaattggttgtacaaatatcatttctc 36818956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 41877650 - 41877682
Alignment:
Q  26 tgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||| |||||||||||||||||||||    
T  41877650 tgtcacaaagtggttgtacaaatatcatttctc 41877682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 43169777 - 43169813
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  43169777 aagttgtcacaaaatggttgtacaaatatcatttctc 43169813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 44855287 - 44855251
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  44855287 aagttgtcacaaaatagttatacaaatatcatttctc 44855251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 45528977 - 45529013
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  45528977 aagttgtcaaaaaatagttgtacaaatatcatttctc 45529013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 46315990 - 46316026
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  46315990 aagttgtcataaagtggttgtacaaatatcatttctc 46316026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 46473164 - 46473128
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||| |||||| |||||||||||||||||||||    
T  46473164 aagttgtcgcaaagtggttgtacaaatatcatttctc 46473128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 47683837 - 47683801
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  47683837 aagttgtcacaaaatggttgtacaaatatcatttctc 47683801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 48405446 - 48405410
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  48405446 aagttgtcacaaaatggttgtacaaatatcatttctc 48405410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 49196732 - 49196696
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  49196732 aagttgtcacaaaatggttgtacaaatatcatttctc 49196696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 50294147 - 50294183
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||| |||||| |||||||||||||||||||||    
T  50294147 aagttgtcgcaaagtggttgtacaaatatcatttctc 50294183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 50559247 - 50559283
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  50559247 aagttgtcaaaaaatagttgtacaaatatcatttctc 50559283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 50879631 - 50879595
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||  |||||||||||||||||||||||    
T  50879631 aagttgtcacaatttagttgtacaaatatcatttctc 50879595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 51672899 - 51672863
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||| ||||||||||| |||||||||||||||||||    
T  51672899 aagttatcacaaagtagatgtacaaatatcatttctc 51672863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 137; Significance: 2e-71; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 74 - 358
Target Start/End: Original strand, 28528939 - 28529223
Alignment:
Q  74 taatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaattctttc 173  Q
    ||||| || |||| |||| ||||||||||||||| || ||||||||| |||| |||||||||| || | |||||||||||||||||||||||||||||||    
T  28528939 taatgtaccaataattgacattttgatcacatggtccacacttatcagaaataatttctcttttggtccacacatatcatcatatatctcaaattctttc 28529038  T
Q  174 ttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcat 273  Q
    || | ||||||| |||||||||||||||||||| ||||  ||||| ||||||| ||||| || |||||||||||||||||| ||||||| ||||||| ||    
T  28529039 ttgacaatatgattattatcaagaatcggatgcaaaattgaatgagagatgatcggttacatgattgtttagttatttatacagagaaaaatatttttat 28529138  T
Q  274 tgatattgaaaatgagaaaatcattctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttata 358  Q
    ||||||||||||||| |||||| ||  ||||||| |||||| ||||||||  | || |||||||||| ||||| | |||||||||    
T  28529139 tgatattgaaaatgataaaatcttttaaagtttctataatatgaaaaatcggagagaacaattattaatgctacagatttttata 28529223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 71 - 314
Target Start/End: Complemental strand, 44719081 - 44718840
Alignment:
Q  71 gtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaattct 170  Q
    |||||||| |||||||||||||||||| | | ||| | || ||||||| |||||||||||||||||  |||||||  |||||||| ||||||||||||||    
T  44719081 gtataatgtactaatagttgatatttttacctcattgtcctcacttattataaatcatttctctttttgcctaca--tatcatcaaatatctcaaattct 44718984  T
Q  171 ttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatatttt 270  Q
    ||||| | ||||||||| ||||||||| | ||||| |||||| ||||||| || || |||||||| |||||||||||||||||||||||||||||| ||     
T  44718983 ttcttgataatatgaattttatcaagatttggatgtgaaatcgaatgaaaaataatcggttaaatgattgtttagttatttatatagagaaagatacttc 44718884  T
Q  271 cattgatattgaaaatgagaaaatcattctaagtttccataata 314  Q
     | ||||||||||||| |||||||||||  |||||| |||||||    
T  44718883 tactgatattgaaaataagaaaatcattgaaagttttcataata 44718840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 138 - 270
Target Start/End: Original strand, 42530893 - 42531033
Alignment:
Q  138 ggcctacacatatcatcatatatctcaaattctttcttaaaaatatgaatat--------tatcaagaatcggatgcgaaatcaaatgaaagatgattgg 229  Q
    |||| |||| |||||||||||||||||||  ||||||| | |||||||||||        ||||||||||||||||||||||||||||| ||||||| ||    
T  42530893 ggcccacacttatcatcatatatctcaaaaactttcttgataatatgaatattatcatattatcaagaatcggatgcgaaatcaaatgagagatgatcgg 42530992  T
Q  230 ttaaatcattgtttagttatttatatagagaaagatatttt 270  Q
    |||||| ||||||||||||||||||||| |||| |||||||    
T  42530993 ttaaatgattgtttagttatttatatagtgaaatatatttt 42531033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 67 - 166
Target Start/End: Complemental strand, 42071626 - 42071527
Alignment:
Q  67 aatagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaa 166  Q
    |||||||||||| |||||||||||  ||||||||||||||  || ||||||||| ||||||||||||| | || | |||| |||||||||||||||||||    
T  42071626 aatagtataatgtactaatagttggcattttgatcacatgatccacacttatcacaaatcatttctctcttggtccacacctatcatcatatatctcaaa 42071527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 242 - 314
Target Start/End: Complemental strand, 42071489 - 42071417
Alignment:
Q  242 ttagttatttatatagagaaagatattttcattgatattgaaaatgagaaaatcattctaagtttccataata 314  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||  ||||||| ||||||    
T  42071489 ttagttatttatatagataaatatatttttattgatattgaaaatgagaaaatcatttaaagtttcgataata 42071417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 21490738 - 21490703
Alignment:
Q  23 agttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||||||||||||||||||||||||    
T  21490738 agttgtcacaaagtagttgtacaaatatcatttctc 21490703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 341
Target Start/End: Original strand, 21490265 - 21490384
Alignment:
Q  220 agatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagaaaatcattctaagtttccataataggaaa 319  Q
    |||||| ||||||||| |||||   |||| ||| |||||||   ||||||| ||||||||||||| |||||||||||||| | ||||| | |||| ||||    
T  21490265 agatgaatggttaaatgattgtc--gttacttagatagagatgtatatttttattgatattgaaattgagaaaatcattcaatgtttcaagaatatgaaa 21490362  T
Q  320 aatcataaaggacaattattat 341  Q
    |||| ||||  ||| |||||||    
T  21490363 aatcgtaaacaacacttattat 21490384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 4738607 - 4738643
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  4738607 aagttgtcacaaagtggttgtacaaatatcatttctc 4738643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 5067681 - 5067717
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||||| |||||||||||||||||||    
T  5067681 aagttgtcacaaagtagatgtacaaatatcatttctc 5067717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 14140372 - 14140408
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| |||||||||||||||||||||||    
T  14140372 aagttgtcacaaattagttgtacaaatatcatttctc 14140408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 30856843 - 30856807
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  30856843 aagttgtcacaaagtggttgtacaaatatcatttctc 30856807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 31629640 - 31629604
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| |||||||||||||||||||||||||||    
T  31629640 aagttgtcaaaaagtagttgtacaaatatcatttctc 31629604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 33296106 - 33296142
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  33296106 aagttgtcacaaagtggttgtacaaatatcatttctc 33296142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 36435717 - 36435681
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  36435717 aagttgtcacaaagtggttgtacaaatatcatttctc 36435681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 58
Target Start/End: Original strand, 42283275 - 42283310
Alignment:
Q  23 agttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||||| |||||||||||||||||||||    
T  42283275 agttgtcacaaagtggttgtacaaatatcatttctc 42283310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 299
Target Start/End: Original strand, 7813549 - 7813624
Alignment:
Q  222 atgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagaaaatcattc 299  Q
    |||| ||||||||  |||||||||||| ||||||||||  |||||| ||  ||| |||| ||||||||||||||||||    
T  7813549 atgaatggttaaacaattgtttagttacttatatagag--agatatatttgttggtatttaaaatgagaaaatcattc 7813624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 294
Target Start/End: Original strand, 947379 - 947492
Alignment:
Q  181 tatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatatt 280  Q
    ||||||||||  ||||||| ||||| |||||   ||| ||||||| || |||| | ||| |||| ||| |||||| ||||  |||||||| ||||| ||     
T  947379 tatgaatatttacaagaattggatgtgaaattgcatggaagatgaatgattaattaattatttatttacttatattgagagtgatatttttattgacatc 947478  T
Q  281 gaaaatgagaaaat 294  Q
    ||||||||||||||    
T  947479 gaaaatgagaaaat 947492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 5167780 - 5167813
Alignment:
Q  25 ttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||| |||||||||||||||||||||    
T  5167780 ttgtcacaaagtggttgtacaaatatcatttctc 5167813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 6365219 - 6365186
Alignment:
Q  25 ttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||| |||||||||||||||||||||    
T  6365219 ttgtcacaaagtggttgtacaaatatcatttctc 6365186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 15283288 - 15283321
Alignment:
Q  25 ttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||| |||||||||||||||||||||    
T  15283288 ttgtcacaaagtggttgtacaaatatcatttctc 15283321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 36133007 - 36132974
Alignment:
Q  25 ttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||| |||||||||||||||||||||    
T  36133007 ttgtcacaaagtggttgtacaaatatcatttctc 36132974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 41040299 - 41040266
Alignment:
Q  25 ttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||| |||||||||||||||||||||    
T  41040299 ttgtcacaaagtggttgtacaaatatcatttctc 41040266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 3091777 - 3091741
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  3091777 aagttatcacaaaatagttgtacaaatatcatttctc 3091741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 4036911 - 4036947
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||| | |||||||||||||||||||||||||||    
T  4036911 aagttgttaaaaagtagttgtacaaatatcatttctc 4036947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 6884946 - 6884910
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  6884946 aagttatcacaaattagttgtacaaatatcatttctc 6884910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 8482256 - 8482292
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  8482256 aagttgtcataaagtggttgtacaaatatcatttctc 8482292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 11229356 - 11229392
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| | |||||||||||||||||||    
T  11229356 aagttgtcacaaagtggatgtacaaatatcatttctc 11229392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 14891113 - 14891149
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  14891113 aagttatcacaaaatagttgtacaaatatcatttctc 14891149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 22303239 - 22303203
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  22303239 aagttgtcaaaaaatagttgtacaaatatcatttctc 22303203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 24727625 - 24727661
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  24727625 aagttgtcaaaaagtggttgtacaaatatcatttctc 24727661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 25507291 - 25507255
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  25507291 aagttgtcaaaaagtggttgtacaaatatcatttctc 25507255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 25801837 - 25801873
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  25801837 aagttgtcacaaattggttgtacaaatatcatttctc 25801873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 29795483 - 29795447
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  29795483 aagttgtcacaaaatggttgtacaaatatcatttctc 29795447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 29893646 - 29893610
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  29893646 aagttatcacaaattagttgtacaaatatcatttctc 29893610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 30487504 - 30487540
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  30487504 aagttgtcacaaattggttgtacaaatatcatttctc 30487540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 36909878 - 36909914
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  36909878 aagttgtcacaaaatggttgtacaaatatcatttctc 36909914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 37966403 - 37966367
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  37966403 aagttgtcacaaattggttgtacaaatatcatttctc 37966367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 43725252 - 43725216
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  43725252 aagttgtcataaagtagatgtacaaatatcatttctc 43725216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 44189863 - 44189827
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  44189863 aagttgtcataaagtggttgtacaaatatcatttctc 44189827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 45376256 - 45376292
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  45376256 aagttgtcaaaaagtggttgtacaaatatcatttctc 45376292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 1e-66; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 83 - 355
Target Start/End: Complemental strand, 6822790 - 6822518
Alignment:
Q  83 aatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaattctttcttaaaaata 182  Q
    |||| |||| |||||||||||||   || || |||||| ||||||||| ||| | | || |||  |||||||||||||||||||||  ||| | | ||||    
T  6822790 aataattgacattttgatcacataatccacatttatcacaaatcatttttctcttgacccacatctatcatcatatatctcaaatttattcatgataata 6822691  T
Q  183 tgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattga 282  Q
    ||||||||||||||||||||||| |||||| ||||| ||||||| |||||||| |||||||||||||||||||| ||||||| ||||| |||||||||||    
T  6822690 tgaatattatcaagaatcggatgtgaaatcgaatgagagatgatcggttaaataattgtttagttatttatataaagaaagaaatttttattgatattga 6822591  T
Q  283 aaatgagaaaatcattctaagtttccataataggaaaaatcataaaggacaattattattgctataaattttt 355  Q
    ||||||  ||||||||| |||||||||||||| |||||||  |||||||||||||||| ||||| ||||||||    
T  6822590 aaatgaacaaatcattcaaagtttccataatatgaaaaattgtaaaggacaattattaatgctacaaattttt 6822518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 212
Target Start/End: Original strand, 11769760 - 11769903
Alignment:
Q  69 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaatt 168  Q
    |||||||||| | |||||||| | |||||||||| ||||||| ||||| ||| ||||||||||||||| |||  | | ||||||||||||||||||||||    
T  11769760 tagtataatgtattaatagttaacattttgatcatatggcccacacttctcacaaatcatttctcttttggctcaaatatatcatcatatatctcaaatt 11769859  T
Q  169 ctttcttaaaaatatgaatattatcaagaatcggatgcgaaatc 212  Q
     |||||| | ||||| ||||| ||||||||||||||||||||||    
T  11769860 ttttcttgataatataaatataatcaagaatcggatgcgaaatc 11769903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 115 - 292
Target Start/End: Original strand, 18250755 - 18250933
Alignment:
Q  115 ttatcataaatcatttctctttcggcctacacat-atcatcatatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatca 213  Q
    |||||| |||| |||||||| | || | |||||| ||| |||||||| |||||||||||||| | ||||||||||||||||||||||  |||| |||||     
T  18250755 ttatcacaaattatttctctcttggtccacacattatcgtcatatatttcaaattctttcttgataatatgaatattatcaagaatcaaatgcaaaatcg 18250854  T
Q  214 aatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagaaa 292  Q
      ||| ||||||   | ||||| |||||||||||||||||||||||||| ||||||| ||| ||||| |||||||||||    
T  18250855 cgtgagagatgaccagataaatgattgtttagttatttatatagagaaaaatatttttattaatattcaaaatgagaaa 18250933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 237 - 336
Target Start/End: Original strand, 33106823 - 33106920
Alignment:
Q  237 attgtttagttatttatatagagaaagatattttcattgatattgaaaatgagaaaatcattctaagtttccataataggaaaaatcataaaggacaatt 336  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||| || ||| |||||||  ||||||| ||||||| ||||    
T  33106823 attgtttagttatttatatagagaaatatatttttattgatattgaaaatgag-aaatcattcaaaatttacataata-taaaaatcgtaaaggataatt 33106920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 69 - 185
Target Start/End: Original strand, 33106707 - 33106823
Alignment:
Q  69 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaatt 168  Q
    |||||||||| |  ||||||||| ||||||| || |||   | ||||||||| |||| |||||||| | |||||||||||||  |||||||| |||||||    
T  33106707 tagtataatgtatcaatagttgacattttgaccatatgattcacacttatcacaaattatttctctcttggcctacacatatagtcatatatatcaaatt 33106806  T
Q  169 ctttcttaaaaatatga 185  Q
    ||||||| | |||||||    
T  33106807 ctttcttgataatatga 33106823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 181 - 336
Target Start/End: Original strand, 6901536 - 6901697
Alignment:
Q  181 tatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatata------gagaaagatattttcatt 274  Q
    |||||| |||||||||| || | ||||||||| |||| | ||| | ||||||||| ||||| |||||| |||||||      |||| ||| ||||| |||    
T  6901536 tatgaagattatcaagactcagctgcgaaatcgaatggatgatcaatggttaaatgattgtctagttacttatatatagagagagagagagatttttatt 6901635  T
Q  275 gatattgaaaatgagaaaatcattctaagtttccataataggaaaaatcataaaggacaatt 336  Q
    || |||||||||||||||||||||| |  |||||| |||| || || || || |||||||||    
T  6901636 gagattgaaaatgagaaaatcattcgatatttccaaaatatgacaagtcgtagaggacaatt 6901697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 12441574 - 12441538
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||||||||||||||||||||||||||||    
T  12441574 aagttgtcacaaagtagttgtacaaatatcatttctc 12441538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 27334894 - 27334858
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| |||||||||||||||||||||||    
T  27334894 aagttgtcacaaaatagttgtacaaatatcatttctc 27334858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 27395634 - 27395598
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| |||||||||||||||||||||||    
T  27395634 aagttgtcacaaaatagttgtacaaatatcatttctc 27395598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 32457287 - 32457323
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  32457287 aagttgtcacaaagtggttgtacaaatatcatttctc 32457323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 57
Target Start/End: Complemental strand, 6435072 - 6435037
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttct 57  Q
    ||||||||||||||| ||||||||||||||||||||    
T  6435072 aagttgtcacaaagtggttgtacaaatatcatttct 6435037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 28549045 - 28549078
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcattt 55  Q
    |||||||||||||| |||||||||||||||||||    
T  28549045 aagttgtcacaaagcagttgtacaaatatcattt 28549078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 30796113 - 30796146
Alignment:
Q  25 ttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||| |||||||||||||||||||||    
T  30796113 ttgtcacaaagtggttgtacaaatatcatttctc 30796146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 1897733 - 1897697
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  1897733 aagttgtcataaagtggttgtacaaatatcatttctc 1897697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 2056819 - 2056783
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  2056819 aagttgtcacaaattggttgtacaaatatcatttctc 2056783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 3339534 - 3339570
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  3339534 aagttgtcacaaaatggttgtacaaatatcatttctc 3339570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 9954584 - 9954548
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  9954584 aagttgtcacaaattggttgtacaaatatcatttctc 9954548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 10521162 - 10521126
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  10521162 aagttatcacaaagtaattgtacaaatatcatttctc 10521126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 12177613 - 12177577
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  12177613 aagttgtcacaaaatagttgtacaaataacatttctc 12177577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 29383593 - 29383557
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  29383593 aagttgtcagaaagtggttgtacaaatatcatttctc 29383557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 31517204 - 31517240
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  31517204 aagttgtcaaaaagtggttgtacaaatatcatttctc 31517240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 31883339 - 31883375
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  31883339 aagttgtcaaaaagtggttgtacaaatatcatttctc 31883375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 32149536 - 32149500
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  32149536 aagttgtcacaaagtggttgtacaaatattatttctc 32149500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 32644659 - 32644623
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  32644659 aagttgtcaaaaaatagttgtacaaatatcatttctc 32644623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 33527471 - 33527435
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||| |||||||||||||||| ||||||||||||||    
T  33527471 aagttatcacaaagtagttgtataaatatcatttctc 33527435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 2e-65; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 69 - 394
Target Start/End: Complemental strand, 15810991 - 15810665
Alignment:
Q  69 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaatt 168  Q
    |||||||||| |  ||||||| | ||||||| |||| || |  ||||||||| |||| |||| ||||| |||| ||| ||||||||||||||||||||||    
T  15810991 tagtataatgtatcaatagttcacattttgaccacacggtctacacttatcacaaattatttttcttttggcccacatatatcatcatatatctcaaatt 15810892  T
Q  169 ctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatatt 268  Q
     ||| || | | ||||||||||||||||||| |||||| ||||| ||||| ||||||| |||||||| |||||||||||||||||||||||||| |||||    
T  15810891 attttttgatagtatgaatattatcaagaattggatgcaaaatcgaatgagagatgatcggttaaatgattgtttagttatttatatagagaaatatatt 15810792  T
Q  269 ttcattgatattgaaaatgagaaaatcattctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttataaatg-tgcac 367  Q
    || |||||| || ||||| |||||| | ||| |||||||| ||||| |||||||  || ||||||||||||| ||||| |||||||| || ||| |||      
T  15810791 tttattgattttcaaaataagaaaaccgttcaaagtttccgtaatatgaaaaattgtagaggacaattattaatgctacaaatttttttatatgatgcct 15810692  T
Q  368 ccactattcaaaaatcctggatccgtc 394  Q
    |||||||| ||||||||| ||||||||    
T  15810691 ccactattaaaaaatcctagatccgtc 15810665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 69 - 394
Target Start/End: Complemental strand, 15727146 - 15726821
Alignment:
Q  69 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaatt 168  Q
    |||||||||| |  ||||||||| |||||||||| | |  || || |||||| |||| |||| | ||| |||| ||| |||| |||||||||||||||||    
T  15727146 tagtataatgtatcaatagttgacattttgatcatacgatccacatttatcacaaattatttgtattttggcccacatatataatcatatatctcaaatt 15727047  T
Q  169 ctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatatt 268  Q
     |||||| | | |||||||||||||||||||| ||||| ||||  ||||| ||||||| |||||||| |||||||||||||||||||| ||||| |||||    
T  15727046 atttcttgatagtatgaatattatcaagaatctgatgcaaaattgaatgagagatgatcggttaaatgattgtttagttatttatataaagaaatatatt 15726947  T
Q  269 ttcattgatattgaaaatgagaaaatcattctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttataaat-gtgcac 367  Q
    || |||||| || ||||| |||||| ||||| |||||||||||||| ||||||| ||| ||||||||||||| ||||| |||||||| || || |||| |    
T  15726946 tttattgattttcaaaataagaaaaccattcaaagtttccataatatgaaaaattatagaggacaattattaatgctacaaatttttttatatggtgc-c 15726848  T
Q  368 ccactattcaaaaatcctggatccgtc 394  Q
    |||||||| |||||| ||| |||||||    
T  15726847 ccactattaaaaaattctgaatccgtc 15726821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 122 - 386
Target Start/End: Complemental strand, 29368713 - 29368448
Alignment:
Q  122 aaatcatttctctttcggcctacacatatcatcatatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaag 221  Q
    ||||||||||||| | |||  ||| |||||||||||||||||||||||||| || | |||||||||||||||||||| ||||| |  |||| ||||  ||    
T  29368713 aaatcatttctctcttggctcacatatatcatcatatatctcaaattctttattgataatatgaatattatcaagaaccggatacataatcgaatgtgag 29368614  T
Q  222 atgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagaaaatcattctaagtttccataataggaaaaa 321  Q
    ||||| |||||||| ||||||   ||||||||||| ||||| ||| ||| |||||||||||||||||||||| ||||| ||||||| |||||| ||||||    
T  29368613 atgatcggttaaatgattgttcgattatttatataaagaaatatacttttattgatattgaaaatgagaaaaccattcaaagtttcaataatatgaaaaa 29368514  T
Q  322 tcataaaggacaattattattgctataaatttttataaatg-tgcacccactattcaaaaatcctg 386  Q
    |  || ||||||||||||| ||||| ||||||||||| ||| ||| |||| || ||||||||||||    
T  29368513 ttctagaggacaattattaatgctacaaatttttatatatgatgcccccaataatcaaaaatcctg 29368448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 83 - 285
Target Start/End: Complemental strand, 4930861 - 4930660
Alignment:
Q  83 aatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaattctttcttaaaaata 182  Q
    ||||||||| ||||||| |||||| ||  ||||| ||| ||||||||||| | | || | |||||||||| ||| ||||||||||||||| || | ||||    
T  4930861 aatagttgagattttgaccacatgacctacacttctcacaaatcatttctttcttggtccacacatatca-catgtatctcaaattcttttttgataata 4930763  T
Q  183 tgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattga 282  Q
    ||||||||||||||||||||||| ||| || |||| ||||||||  ||||||| ||| |||||||||||||||| ||||| ||||||| |||||||||||    
T  4930762 tgaatattatcaagaatcggatgtgaagtcgaatggaagatgatcagttaaatgattatttagttatttatataaagaaatatatttttattgatattga 4930663  T
Q  283 aaa 285  Q
    |||    
T  4930662 aaa 4930660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 241 - 394
Target Start/End: Original strand, 22399404 - 22399557
Alignment:
Q  241 tttagttatttatatagagaaagatattttcattgatattgaaaatgagaaaatcattctaagtttccataataggaaaaatcataaaggacaattatta 340  Q
    ||||||||||||||| ||||||  | |||  |||||||||||||||||||||||||||  |||||||||||||| ||| |||  || |||||||||| ||    
T  22399404 tttagttatttatat-gagaaatgtttttctattgatattgaaaatgagaaaatcatttaaagtttccataatatgaataattctataggacaattacta 22399502  T
Q  341 ttgctataaatttttataaat-gtgcacccactattcaaaaatcctggatccgtc 394  Q
     ||||| ||||||||||| || |||| ||||||||||||||||||||||||||||    
T  22399503 atgctacaaatttttatatatagtgcgcccactattcaaaaatcctggatccgtc 22399557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 125128 - 125092
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||||||||||||||||||||||||||||    
T  125128 aagttgtcacaaagtagttgtacaaatatcatttctc 125092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 245 - 295
Target Start/End: Original strand, 17229004 - 17229054
Alignment:
Q  245 gttatttatatagagaaagatattttcattgatattgaaaatgagaaaatc 295  Q
    |||||||| ||||||||| ||||||| |||||| |||||||||||||||||    
T  17229004 gttatttacatagagaaaaatatttttattgattttgaaaatgagaaaatc 17229054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 199
Target Start/End: Complemental strand, 38351768 - 38351726
Alignment:
Q  157 atatctcaaattctttcttaaaaatatgaatattatcaagaat 199  Q
    ||||||||||||||||||| | |||||||||||||||||||||    
T  38351768 atatctcaaattctttcttgataatatgaatattatcaagaat 38351726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 138 - 199
Target Start/End: Original strand, 17228914 - 17228975
Alignment:
Q  138 ggcctacacatatcatcatatatctcaaattctttcttaaaaatatgaatattatcaagaat 199  Q
    |||| ||| ||||||||||||| |||||||||||| || | |||||||||||| ||||||||    
T  17228914 ggcccacatatatcatcatatagctcaaattcttttttgataatatgaatattgtcaagaat 17228975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 1774318 - 1774354
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||||| |||||||||||||||||||    
T  1774318 aagttgtcacaaagtagatgtacaaatatcatttctc 1774354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 6865811 - 6865847
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  6865811 aagttgtcacaaagtggttgtacaaatatcatttctc 6865847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 19127160 - 19127124
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  19127160 aagttgtcacaaagtggttgtacaaatatcatttctc 19127124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 23991169 - 23991205
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  23991169 aagttgtcacaaagtggttgtacaaatatcatttctc 23991205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 306
Target Start/End: Original strand, 27343174 - 27343218
Alignment:
Q  262 agatattttcattgatattgaaaatgagaaaatcattctaagttt 306  Q
    ||||||||| ||||| |||||||||||||||||||||| ||||||    
T  27343174 agatatttttattgacattgaaaatgagaaaatcattcaaagttt 27343218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 28811465 - 28811429
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  28811465 aagttgtcacaaagtggttgtacaaatatcatttctc 28811429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 54
Target Start/End: Complemental strand, 29227753 - 29227721
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatt 54  Q
    |||||||||||||||||||||||||||||||||    
T  29227753 aagttgtcacaaagtagttgtacaaatatcatt 29227721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 34381048 - 34381012
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  34381048 aagttgtcacaaagtggttgtacaaatatcatttctc 34381012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 36713213 - 36713249
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  36713213 aagttgtcacaaagtggttgtacaaatatcatttctc 36713249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 39595308 - 39595272
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  39595308 aagttgtcacaaagtggttgtacaaatatcatttctc 39595272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 58
Target Start/End: Original strand, 14508193 - 14508228
Alignment:
Q  23 agttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||| |||||||||||||||||||||||    
T  14508193 agttgtcacaaaatagttgtacaaatatcatttctc 14508228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 56
Target Start/End: Complemental strand, 12910820 - 12910786
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttc 56  Q
    ||||||||||||||| |||||||||||||||||||    
T  12910820 aagttgtcacaaagtggttgtacaaatatcatttc 12910786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 272 - 314
Target Start/End: Complemental strand, 40910037 - 40909995
Alignment:
Q  272 attgatattgaaaatgagaaaatcattctaagtttccataata 314  Q
    |||||||||||||||||||| ||||||| ||||||| ||||||    
T  40910037 attgatattgaaaatgagaagatcattcaaagtttctataata 40909995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Complemental strand, 4098659 - 4098626
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcattt 55  Q
    ||||||||||||| ||||||||||||||||||||    
T  4098659 aagttgtcacaaaatagttgtacaaatatcattt 4098626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 33567247 - 33567280
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcattt 55  Q
    ||||||||||||||| ||||||||||||||||||    
T  33567247 aagttgtcacaaagtggttgtacaaatatcattt 33567280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 3263543 - 3263579
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  3263543 aagttgtcacaaattggttgtacaaatatcatttctc 3263579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 4800537 - 4800573
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  4800537 aagttgtcaaaaagtagttgtataaatatcatttctc 4800573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 4954502 - 4954466
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| || ||||||||||||||||||||    
T  4954502 aagttgtcacaaattaattgtacaaatatcatttctc 4954466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 5130402 - 5130438
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  5130402 aagttgtcacaaagtagatgtacatatatcatttctc 5130438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 8728616 - 8728652
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  8728616 aagttgtcaaaaagtggttgtacaaatatcatttctc 8728652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 8959196 - 8959160
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||| | |||||||||||||||||||||||    
T  8959196 aagttgtcacataatagttgtacaaatatcatttctc 8959160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 9594514 - 9594478
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  9594514 aagttgtcacaaattggttgtacaaatatcatttctc 9594478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 9599763 - 9599799
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  9599763 aagttgtcacaaattggttgtacaaatatcatttctc 9599799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 11768025 - 11768061
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| | |||||||||||||||||||    
T  11768025 aagttgtcacaaagtggatgtacaaatatcatttctc 11768061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 12718415 - 12718451
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  12718415 aagttgtcacaaattggttgtacaaatatcatttctc 12718451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 12779641 - 12779677
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  12779641 aagttgtcacaaattggttgtacaaatatcatttctc 12779677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 13734384 - 13734420
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  13734384 aagttgtcataaagtggttgtacaaatatcatttctc 13734420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 14780456 - 14780492
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  14780456 aagttgtcaaaaagtagatgtacaaatatcatttctc 14780492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 14914408 - 14914372
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  14914408 aagttgtcacaaaatggttgtacaaatatcatttctc 14914372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 15918025 - 15918061
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| || ||||||||||||||||||||    
T  15918025 aagttgtcacaaattaattgtacaaatatcatttctc 15918061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 16143426 - 16143390
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  16143426 aagttgtcacaaaatggttgtacaaatatcatttctc 16143390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 19376167 - 19376203
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  19376167 aagttgtcagaaagtggttgtacaaatatcatttctc 19376203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 28904027 - 28903991
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||| || |||||||||||||||||||||    
T  28904027 aagttgtcacaatgtggttgtacaaatatcatttctc 28903991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 28940422 - 28940386
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||| || |||||||||||||||||||||    
T  28940422 aagttgtcacaatgtggttgtacaaatatcatttctc 28940386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 29803261 - 29803225
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  29803261 aagttgtcaaaaaatagttgtacaaatatcatttctc 29803225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 30574412 - 30574448
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  30574412 aagttgtcacaaattggttgtacaaatatcatttctc 30574448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 30838400 - 30838436
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  30838400 aagttgtcaaaaagtagatgtacaaatatcatttctc 30838436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 34428196 - 34428160
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  34428196 aagttgtcaaaaaatagttgtacaaatatcatttctc 34428160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 36572727 - 36572691
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  36572727 aagttgtcacaaaatagttatacaaatatcatttctc 36572691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 40223820 - 40223856
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  40223820 aagttgtcacaaagtggttgtacaaatataatttctc 40223856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 41621963 - 41621999
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  41621963 aagttgtcaaaaagtggttgtacaaatatcatttctc 41621999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 42699093 - 42699057
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  42699093 aagttgtcacaaaatggttgtacaaatatcatttctc 42699057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 43057471 - 43057435
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  43057471 aagttgtcaaaaagtggttgtacaaatatcatttctc 43057435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 121; Significance: 7e-62; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 138 - 346
Target Start/End: Complemental strand, 40381802 - 40381594
Alignment:
Q  138 ggcctacacatatcatcatatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatca 237  Q
    |||| |||||||||||||||||||||||||| ||| || | ||||||||||||||||||||||| ||| |||||| ||||| ||||||| |||||||| |    
T  40381802 ggcccacacatatcatcatatatctcaaattattttttgataatatgaatattatcaagaatcgcatgtgaaatcgaatgagagatgatcggttaaatga 40381703  T
Q  238 ttgtttagttatttatatagagaaagatattttcattgatattgaaaatgagaaaatcattctaagtttccataataggaaaaatcataaaggacaatta 337  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| ||||||| ||||||  ||||||| || | ||||||||    
T  40381702 ttgtttagttatttatatagagaaatatatttttattgatattgaaaatgagaaaatctttcaaagtttctataatataaaaaatcgtagaagacaatta 40381603  T
Q  338 ttattgcta 346  Q
    ||| |||||    
T  40381602 ttaatgcta 40381594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 152 - 381
Target Start/End: Original strand, 42163974 - 42164204
Alignment:
Q  152 atcatatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttattt 251  Q
    |||||||||||| |||| |||||| | ||||||||||||||||||||||  ||  |||||| ||||| |||| || |||||||| |||||||||||||||    
T  42163974 atcatatatctctaattatttcttgataatatgaatattatcaagaatcaaataggaaatcgaatgagagataatcggttaaatgattgtttagttattt 42164073  T
Q  252 atatagagaaagatattttcattgatattgaaaatgagaaaatcattctaagtttccataataggaaaaatcataaaggacaattattattgctataaat 351  Q
    |||||||||| |||||||| ||||||||| |||||||||||||||||| || |||||||||||  ||||||  || | || ||| |||| ||||| |||     
T  42164074 atatagagaaggatatttttattgatattaaaaatgagaaaatcattcaaaatttccataatataaaaaattgtagatgataatcattaatgctacaaaa 42164173  T
Q  352 ttttataaatg-tgcacccactattcaaaaa 381  Q
    ||||||| ||| | | |||||||||||||||    
T  42164174 ttttatatatgatacccccactattcaaaaa 42164204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 110 - 390
Target Start/End: Complemental strand, 3310775 - 3310494
Alignment:
Q  110 cccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaattcttt-cttaaaaatatgaatattatcaagaatcggatgcga 208  Q
    ||||||||||  |||| |||||||||| |||  ||   ||||||||||||||||||||| ||| ||| | | ||||||||||||||||||||||||| ||    
T  3310775 cccacttatccgaaattatttctcttttggctcacgtttatcatcatatatctcaaatttttttcttcatagtatgaatattatcaagaatcggatgaga 3310676  T
Q  209 aatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagaaaatcattctaagtttcc 308  Q
    | || ||||| |||||   ||||||||  ||||||| |||||| ||||| |||| ||||||| | ||||||||||||||| || || |  | ||||||||    
T  3310675 attcgaatgagagatgtccggttaaatgtttgtttaattatttgtatagtgaaatatatttttaatgatattgaaaatgataagat-aaccaaagtttcc 3310577  T
Q  309 ataataggaaaaatcataaaggacaattattattgctataaatttttataaat-gtgcacccactattcaaaaatcctggatc 390  Q
    |||||| |||||||  || ||||||||||||| ||||| ||||||| ||| || |||| ||||| |||||||||| |||||||    
T  3310576 ataatatgaaaaatagtagaggacaattattaatgctacaaattttcatatatagtgcccccaccattcaaaaattctggatc 3310494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 69 - 270
Target Start/End: Original strand, 14539388 - 14539589
Alignment:
Q  69 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaatt 168  Q
    |||||||||| ||  ||| |||| ||||| || |||||| || |||||| || ||||||||||||| | |||| |||| ||| ||||||||||||||||     
T  14539388 tagtataatgtacccataattgacattttaattacatggtccacacttaacacaaatcatttctctcttggcccacacctataatcatatatctcaaatc 14539487  T
Q  169 ctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatatt 268  Q
    ||||||| | | ||||||||||||||| |||| ||||||||||| | ||  ||||||  |||||||| |||||||||||||||||||||| ||| |||||    
T  14539488 ctttcttgatagtatgaatattatcaaaaatcagatgcgaaatcgagtgggagatgaccggttaaatgattgtttagttatttatatagaaaaaaatatt 14539587  T
Q  269 tt 270  Q
    ||    
T  14539588 tt 14539589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 143 - 358
Target Start/End: Original strand, 37728356 - 37728571
Alignment:
Q  143 acacatatcatcatatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtt 242  Q
    |||| ||||||||||||| | ||||  ||| || |  |||||||||| |||||||||  ||||| ||||| | ||  |||||  ||||||||| || |||    
T  37728356 acacctatcatcatatattttaaatcattttttgatgatatgaatatgatcaagaattagatgcaaaatcgagtgtgagatggctggttaaatgatcgtt 37728455  T
Q  243 tagttatttatatagagaaagatattttcattgatattgaaaatgagaaaatcattctaagtttccataataggaaaaatcataaaggacaattattatt 342  Q
    ||||||||||||||||||| |||||||| ||||||||||||||| ||||||| |||| || |||||||  || | ||||||||| || |||||||||| |    
T  37728456 tagttatttatatagagaatgatatttttattgatattgaaaattagaaaattattcaaattttccatggtacggaaaatcatagagaacaattattaat 37728555  T
Q  343 gctataaatttttata 358  Q
    |||| |||||||||||    
T  37728556 gctacaaatttttata 37728571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 303 - 394
Target Start/End: Complemental strand, 1336201 - 1336109
Alignment:
Q  303 gtttccataataggaaaaatcataaaggacaattattattgctataaatttttataaat-gtgcacccactattcaaaaatcctggatccgtc 394  Q
    |||||||||||| ||| ||||||| |||||||||| || ||||| |||||||||||  | |||| ||||||||||||||||||||||||||||    
T  1336201 gtttccataatatgaataatcatagaggacaattactaatgctacaaatttttatatgtagtgcccccactattcaaaaatcctggatccgtc 1336109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 227 - 299
Target Start/End: Complemental strand, 2537272 - 2537200
Alignment:
Q  227 tggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagaaaatcattc 299  Q
    ||||||||| |||||||||||| ||||||||||| |||||||||  ||| |||||||||||||||||||||||    
T  2537272 tggttaaattattgtttagttacttatatagagagagatatttttgttggtattgaaaatgagaaaatcattc 2537200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 181 - 336
Target Start/End: Complemental strand, 12585810 - 12585655
Alignment:
Q  181 tatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatatt 280  Q
    |||||| |||||||||| || | ||||||||  ||||   ||| | ||||||||| ||||| |||||| ||||||||||| ||| ||||| ||||| |||    
T  12585810 tatgaagattatcaagactcagttgcgaaattgaatgggtgatcaatggttaaatgattgtctagttacttatatagagagagagatttttattgagatt 12585711  T
Q  281 gaaaatgagaaaatcattctaagtttccataataggaaaaatcataaaggacaatt 336  Q
    ||||||||||||||||||| |  |||||| |||| || || || || |||||||||    
T  12585710 gaaaatgagaaaatcattcgatatttccaaaatatgacaagtcgtagaggacaatt 12585655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 83 - 166
Target Start/End: Complemental strand, 1336363 - 1336280
Alignment:
Q  83 aatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaa 166  Q
    ||||||||| ||||||||||||||  || ||||||||| ||| ||||||||| | |||| |||| |||||||||||||||||||    
T  1336363 aatagttgacattttgatcacatgaaccacacttatcacaaaacatttctctcttggcccacacttatcatcatatatctcaaa 1336280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 232 - 394
Target Start/End: Complemental strand, 16340319 - 16340159
Alignment:
Q  232 aaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagaaaatcattctaagtttccataataggaaaaatcataaagga 331  Q
    |||| |||||||||||||||||| ||||| |  | |||| ||||||||||||||| ||||||||||||  ||||||| ||||| ||| |||  || | ||    
T  16340319 aaatgattgtttagttatttatacagagata--tttttttattgatattgaaaataagaaaatcattcacagtttccgtaatatgaataattgtagaaga 16340222  T
Q  332 caattattattgctataaatttttataaatgtgcacccactattcaaaaatcctggatccgtc 394  Q
    | ||||||| ||||| || ||||| | |  ||||  ||| | |||||||||| ||||||||||    
T  16340221 ctattattaatgctacaatttttttttatagtgcctccattgttcaaaaatcttggatccgtc 16340159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 6004977 - 6004944
Alignment:
Q  25 ttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||||||||||||||||||||||    
T  6004977 ttgtcacaaagtagttgtacaaatatcatttctc 6004944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 1796532 - 1796496
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  1796532 aagttgtcacaaagtggttgtacaaatatcatttctc 1796496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 5502407 - 5502371
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  5502407 aagttgtcacaaagtggttgtacaaatatcatttctc 5502371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 12732878 - 12732842
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  12732878 aagttgtcacaaagtggttgtacaaatatcatttctc 12732842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 22852874 - 22852910
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  22852874 aagttgtcacaaagtggttgtacaaatatcatttctc 22852910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 28927717 - 28927681
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  28927717 aagttgtcacaaagtggttgtacaaatatcatttctc 28927681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 36497697 - 36497661
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| |||||||||||||||||||||||    
T  36497697 aagttgtcacaaaatagttgtacaaatatcatttctc 36497661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 45101432 - 45101396
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  45101432 aagttgtcacaaagtggttgtacaaatatcatttctc 45101396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 192 - 294
Target Start/End: Original strand, 15356060 - 15356162
Alignment:
Q  192 tcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagaa 291  Q
    ||||||||| ||||| |||||  |||  |||||| || |||||  |||||||||||| ||||||||||| | | | |||| ||| |||||| ||||||||    
T  15356060 tcaagaatcagatgcaaaatcgtatgggagatgaatgattaaacaattgtttagttacttatatagagagatacactttcgttggtattgataatgagaa 15356159  T
Q  292 aat 294  Q
    |||    
T  15356160 aat 15356162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Complemental strand, 11138943 - 11138910
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcattt 55  Q
    ||||||||||||| ||||||||||||||||||||    
T  11138943 aagttgtcacaaaatagttgtacaaatatcattt 11138910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Complemental strand, 27836216 - 27836183
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcattt 55  Q
    ||||||||||||||| ||||||||||||||||||    
T  27836216 aagttgtcacaaagtggttgtacaaatatcattt 27836183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 42047368 - 42047335
Alignment:
Q  25 ttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||| ||||||||||||||||||||||||||||    
T  42047368 ttgtcccaaagtagttgtacaaatatcatttctc 42047335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 43419912 - 43419879
Alignment:
Q  25 ttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||| |||||||||||||||||||||||    
T  43419912 ttgtcacaaattagttgtacaaatatcatttctc 43419879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 1065453 - 1065417
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  1065453 aagttgtcacaaattggttgtacaaatatcatttctc 1065417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 1370309 - 1370345
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  1370309 aagttgttacaaagtggttgtacaaatatcatttctc 1370345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 5740809 - 5740845
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  5740809 aagttgtcaaaaagtggttgtacaaatatcatttctc 5740845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 7596926 - 7596962
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||||||  ||||||||||||||||||||    
T  7596926 aagttgtcacaaagtgattgtacaaatatcatttctc 7596962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 7678768 - 7678732
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  7678768 aagttgtcaaaaagtggttgtacaaatatcatttctc 7678732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 8143244 - 8143280
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  8143244 aagttgtcacaaaatagttgtacaaatattatttctc 8143280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 9047094 - 9047130
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  9047094 aagttgtcaaaaagtggttgtacaaatatcatttctc 9047130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 13267121 - 13267157
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  13267121 aagttgtcacaaagtggttgaacaaatatcatttctc 13267157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 20288569 - 20288533
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  20288569 aagttgtcacaaattggttgtacaaatatcatttctc 20288533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 21075198 - 21075162
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  21075198 aagttgtcacaaattggttgtacaaatatcatttctc 21075162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 21273745 - 21273781
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  21273745 aagttgtcacaaaatggttgtacaaatatcatttctc 21273781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 26629145 - 26629181
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  26629145 aagttgtcaaaaagtggttgtacaaatatcatttctc 26629181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 30170764 - 30170800
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  30170764 aagttgtcaaaaagtggttgtacaaatatcatttctc 30170800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 37524452 - 37524488
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||||||  ||||||||||||||||||||    
T  37524452 aagttgtcacaaagtgcttgtacaaatatcatttctc 37524488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 37562176 - 37562212
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||| | |||||||||||||||||||||||    
T  37562176 aagttgtcacataatagttgtacaaatatcatttctc 37562212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 38844825 - 38844861
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  38844825 aagttgtcacaaaatggttgtacaaatatcatttctc 38844861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 105
Target Start/End: Complemental strand, 40381863 - 40381827
Alignment:
Q  69 tagtataatgcactaatagttgatattttgatcacat 105  Q
    |||||||||| || |||||||||||||||||||||||    
T  40381863 tagtataatgtaccaatagttgatattttgatcacat 40381827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 40413373 - 40413409
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| || ||||||||||||||||||||    
T  40413373 aagttgtcacaaaataattgtacaaatatcatttctc 40413409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 40842050 - 40842014
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  40842050 aagttatcacaaagtggttgtacaaatatcatttctc 40842014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 41746856 - 41746820
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||| | |||||||||||||||||||||||    
T  41746856 aagttgtcacagattagttgtacaaatatcatttctc 41746820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 5e-60; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 83 - 394
Target Start/End: Complemental strand, 27850707 - 27850394
Alignment:
Q  83 aatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaattcttt-cttaaaaat 181  Q
    ||||||| ||||||||| ||||||  || |||||||||||||| |||||||||| |||| |||| |||||| |||||| ||||||| ||| ||| | |||    
T  27850707 aatagtttatattttgaccacatgtaccacacttatcataaattatttctcttttggcccacacttatcattatatatatcaaatttttttcttgataat 27850608  T
Q  182 atgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattg 281  Q
    |||||||||||||||||| |||||| ||| | |||  || |||||  ||||||| ||||||||||||||||||||| |||||| ||||| ||| ||||||    
T  27850607 atgaatattatcaagaattggatgcaaaagcgaatataatatgatcagttaaatgattgtttagttatttatatagtgaaagacatttttattaatattg 27850508  T
Q  282 aaaatgagaaaatcattctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttataaatg-tgcacccactattcaaaa 380  Q
    ||||||| || ||||||| |||||||||||| | ||||||| ||| |||| |||||||| | ||| ||||||| ||| ||| ||| | || |||||||||    
T  27850507 aaaatgataatatcattcaaagtttccataaaatgaaaaattatagaggagaattattaatactacaaattttcatatatgatgccctcattattcaaaa 27850408  T
Q  381 atcctggatccgtc 394  Q
    ||| ||||||||||    
T  27850407 atcttggatccgtc 27850394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 120 - 350
Target Start/End: Complemental strand, 30294321 - 30294091
Alignment:
Q  120 ataaatcatttctctttcggcctacacatatcatcatatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaa 219  Q
    |||||| |||||||||| |  |||||||||||||||||||||| |||||||||||| | | |||||||||||||||||||| ||||||||||| |||||     
T  30294321 ataaattatttctcttttgatctacacatatcatcatatatcttaaattctttcttgatagtatgaatattatcaagaatctgatgcgaaatcgaatgag 30294222  T
Q  220 agatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagaaaatcattctaagtttccataataggaaa 319  Q
    ||||||| |||||||  |||||||||||||||||||| | ||||||||||| |||||| || ||||| |||||| ||||| |||||||||||||| ||||    
T  30294221 agatgatcggttaaaagattgtttagttatttatataaaaaaagatatttttattgattttcaaaataagaaaaccattcaaagtttccataatatgaaa 30294122  T
Q  320 aatcataaaggacaattattattgctataaa 350  Q
    |||  || | ||||||||||| || ||||||    
T  30294121 aattgtagaagacaattattaatgttataaa 30294091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 73 - 297
Target Start/End: Original strand, 21487306 - 21487530
Alignment:
Q  73 ataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaattcttt 172  Q
    ||||||||| || |||||||||||||| ||||||| || ||||| ||| ||||||||||||||| || | ||||||||||||| ||||||||||||||||    
T  21487306 ataatgcaccaa-agttgatattttgaccacatggtccacacttctcacaaatcatttctcttttggtccacacatatcatca-atatctcaaattcttt 21487403  T
Q  173 cttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatatttt-- 270  Q
     || | ||||||||||||||     ||| ||||  ||||||||||| |||||||  ||||||| |||||||| ||||||||||||| ||| |||||||      
T  21487404 tttgataatatgaatattat-----atcagatgtaaaatcaaatgagagatgatcagttaaatgattgtttaattatttatatagataaaaatatttttt 21487498  T
Q  271 -----cattgatattgaaaatgagaaaatcat 297  Q
          ||||||||||||||||||||||||||    
T  21487499 attgatattgatattgaaaatgagaaaatcat 21487530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 220 - 327
Target Start/End: Complemental strand, 37245022 - 37244915
Alignment:
Q  220 agatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagaaaatcattctaagtttccataataggaaa 319  Q
    |||||||| ||||||| |||||||| |||||||||| |||||  ||||||| |||||||| ||||||| ||||||||||| |||||| ||||| | ||||    
T  37245022 agatgattcgttaaatgattgtttaattatttatattgagaacaatatttttattgatatcgaaaatgtgaaaatcattcaaagttttcataaaatgaaa 37244923  T
Q  320 aatcataa 327  Q
    ||||||||    
T  37244922 aatcataa 37244915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 296 - 394
Target Start/End: Original strand, 46396620 - 46396719
Alignment:
Q  296 attctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttataaat-gtgcacccactattcaaaaatcctggatccgtc 394  Q
    |||| ||||||| |||||| ||| |||| || ||||||||||||| ||||| ||||||||||| || |||| ||||||||||||||||||||||||||||    
T  46396620 attcaaagtttcaataatatgaataatcgtagaggacaattattaatgctacaaatttttatatatagtgcccccactattcaaaaatcctggatccgtc 46396719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 46396444 - 46396541
Alignment:
Q  69 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaa 166  Q
    |||||||||| |  ||||||||| |||||||||||||||  | ||||||||| ||||||||||||| | |||| |||| |||||||||||||||||||    
T  46396444 tagtataatgtatcaatagttgacattttgatcacatggatcacacttatcagaaatcatttctctcttggcccacacttatcatcatatatctcaaa 46396541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 185 - 256
Target Start/End: Complemental strand, 5200404 - 5200333
Alignment:
Q  185 aatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatata 256  Q
    ||||||||||||||||  ||| |||||||||||| ||||||||| |||||| ||||||||||||||||||||    
T  5200404 aatattatcaagaatcaaatgtgaaatcaaatgagagatgattgattaaataattgtttagttatttatata 5200333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 69 - 172
Target Start/End: Complemental strand, 42773473 - 42773370
Alignment:
Q  69 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaatt 168  Q
    |||||||||| || ||||||||||||||||| ||||| |||  | ||| | | ||||||||||||||| |||  ||||||||||||||||| ||||||||    
T  42773473 tagtataatgtaccaatagttgatattttgaccacatagcctactcttcttacaaatcatttctcttttggcacacacatatcatcatataactcaaatt 42773374  T
Q  169 cttt 172  Q
    ||||    
T  42773373 cttt 42773370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 293 - 394
Target Start/End: Complemental strand, 1282277 - 1282175
Alignment:
Q  293 atcattctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttataaat-gtgcacccactattcaaaaatcctggatcc 391  Q
    ||||||| |||||||||||||| ||| |||  || | ||||||||||| ||||| | ||||||||| || |||| |||||||||||||||||||||||||    
T  1282277 atcattcaaagtttccataatatgaataattgtagatgacaattattaatgctacagatttttatatatagtgcccccactattcaaaaatcctggatcc 1282178  T
Q  392 gtc 394  Q
    |||    
T  1282177 gtc 1282175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 293 - 394
Target Start/End: Complemental strand, 1283308 - 1283206
Alignment:
Q  293 atcattctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttataaat-gtgcacccactattcaaaaatcctggatcc 391  Q
    ||||||| |||||||||||||| ||| |||  || | ||||||||||| ||||| | ||||||||| || |||| |||||||||||||||||||||||||    
T  1283308 atcattcaaagtttccataatatgaataattgtagatgacaattattaatgctacagatttttatatatagtgcccccactattcaaaaatcctggatcc 1283209  T
Q  392 gtc 394  Q
    |||    
T  1283208 gtc 1283206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 239 - 299
Target Start/End: Original strand, 29095842 - 29095902
Alignment:
Q  239 tgtttagttatttatatagagaaagatattttcattgatattgaaaatgagaaaatcattc 299  Q
    |||||||||| ||| |||||||||||| |||| ||||| ||||||||||||||||||||||    
T  29095842 tgtttagttacttacatagagaaagatgtttttattgagattgaaaatgagaaaatcattc 29095902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 83 - 172
Target Start/End: Complemental strand, 37245128 - 37245038
Alignment:
Q  83 aatagttgatattttgatcacatggcccccacttatcataaatcatttctct-ttcggcctacacatatcatcatatatctcaaattcttt 172  Q
    |||| |||| ||||||||||||||  || ||||||||||||||||||||||| || | || ||| |||| |||||||||||||||| ||||    
T  37245128 aatatttgacattttgatcacatgatccacacttatcataaatcatttctctcttagccccacatatataatcatatatctcaaatacttt 37245038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 24 - 58
Target Start/End: Complemental strand, 10384245 - 10384211
Alignment:
Q  24 gttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||||||||||||||||||||||||||    
T  10384245 gttgtcacaaagtagttgtacaaatatcatttctc 10384211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 232 - 269
Target Start/End: Complemental strand, 42772377 - 42772340
Alignment:
Q  232 aaatcattgtttagttatttatatagagaaagatattt 269  Q
    |||| |||||||||||||||||||||||||||||||||    
T  42772377 aaatgattgtttagttatttatatagagaaagatattt 42772340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 5309075 - 5309111
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  5309075 aagttgtcacaaagtggttgtacaaatatcatttctc 5309111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 6829818 - 6829854
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| |||||||||||||||||||||||    
T  6829818 aagttgtcacaaattagttgtacaaatatcatttctc 6829854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 7503506 - 7503470
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||||||||||| ||||||||||||||||    
T  7503506 aagttgtcacaaagtagttggacaaatatcatttctc 7503470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 8391362 - 8391398
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||| |||||||||||||||||||||||||||||||    
T  8391362 aagttctcacaaagtagttgtacaaatatcatttctc 8391398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 18610809 - 18610773
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| |||||||||||||||||||||||    
T  18610809 aagttgtcacaaaatagttgtacaaatatcatttctc 18610773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 29293995 - 29293959
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| |||||||||||||||||||||||||||    
T  29293995 aagttgtcataaagtagttgtacaaatatcatttctc 29293959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 32821671 - 32821635
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  32821671 aagttgtcacaaagtggttgtacaaatatcatttctc 32821635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 37843467 - 37843503
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| |||||||||||||||||||||||||||    
T  37843467 aagttgtcaaaaagtagttgtacaaatatcatttctc 37843503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 45740579 - 45740615
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  45740579 aagttgtcacaaagtggttgtacaaatatcatttctc 45740615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 49425774 - 49425738
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  49425774 aagttgtcacaaagtggttgtacaaatatcatttctc 49425738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 49453527 - 49453491
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  49453527 aagttgtcacaaagtggttgtacaaatatcatttctc 49453491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 50226914 - 50226950
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  50226914 aagttgtcacaaagtggttgtacaaatatcatttctc 50226950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 180 - 247
Target Start/End: Complemental strand, 42772459 - 42772392
Alignment:
Q  180 atatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagtt 247  Q
    ||||||||||||||||||||||||  || |||| ||||| |||||||   |||||| |||||||||||    
T  42772459 atatgaatattatcaagaatcggacacggaatcgaatgagagatgatcaattaaatgattgtttagtt 42772392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 58
Target Start/End: Original strand, 25302680 - 25302714
Alignment:
Q  24 gttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| |||||||||||||||||||||    
T  25302680 gttgtcacaaagtggttgtacaaatatcatttctc 25302714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 260
Target Start/End: Complemental strand, 1282354 - 1282281
Alignment:
Q  187 tattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagaga 260  Q
    |||||| ||||||  ||||||||||||| |    ||||| ||||||||| ||||||||||||||| ||||||||    
T  1282354 tattattaagaattagatgcgaaatcaagtaggggatgactggttaaatgattgtttagttatttttatagaga 1282281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 1282452 - 1282356
Alignment:
Q  69 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaa 166  Q
    |||||||||| | |||||||||| |||| |||||||||   | ||||||||| ||||||||||| | | |||| |||| | || ||||||||||||||    
T  1282452 tagtataatgtattaatagttgacattt-gatcacatgaatcacacttatcacaaatcatttctatcttggcccacacttgtcgtcatatatctcaaa 1282356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 260
Target Start/End: Complemental strand, 1283385 - 1283312
Alignment:
Q  187 tattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagaga 260  Q
    |||||| ||||||  ||||||||||||| |    ||||| ||||||||| ||||||||||||||| ||||||||    
T  1283385 tattattaagaattagatgcgaaatcaagtaggggatgactggttaaatgattgtttagttatttttatagaga 1283312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 1283483 - 1283387
Alignment:
Q  69 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaa 166  Q
    |||||||||| | |||||||||| |||| |||||||||   | ||||||||| ||||||||||| | | |||| |||| | || ||||||||||||||    
T  1283483 tagtataatgtattaatagttgacattt-gatcacatgaatcacacttatcacaaatcatttctatcttggcccacacttgtcgtcatatatctcaaa 1283387  T

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Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 5477187 - 5477220
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcattt 55  Q
    ||||||||||||||| ||||||||||||||||||    
T  5477187 aagttgtcacaaagtggttgtacaaatatcattt 5477220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 57
Target Start/End: Original strand, 9882696 - 9882729
Alignment:
Q  24 gttgtcacaaagtagttgtacaaatatcatttct 57  Q
    ||||||||||| ||||||||||||||||||||||    
T  9882696 gttgtcacaaaatagttgtacaaatatcatttct 9882729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 31427995 - 31428028
Alignment:
Q  25 ttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||| |||||||||||||||||||||    
T  31427995 ttgtcacaaagtggttgtacaaatatcatttctc 31428028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 31570500 - 31570581
Alignment:
Q  218 aaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagaaaatcattc 299  Q
    |||||| | ||||||||  ||| |||||||||||||||||||| | |||||||  ||| |||| ||||||| | ||||||||    
T  31570500 aaagataaatggttaaaaaattatttagttatttatatagagagaaatatttttgttgttattaaaaatgaaataatcattc 31570581  T

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Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 7078535 - 7078571
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  7078535 aagttgtcacaaaatagatgtacaaatatcatttctc 7078571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 8934631 - 8934667
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  8934631 aagttgtcacaaaatagttgtacaaatataatttctc 8934667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 9011681 - 9011645
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  9011681 aagttgtcacaaaatggttgtacaaatatcatttctc 9011645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 13813594 - 13813558
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  13813594 aagttgtcacaaattggttgtacaaatatcatttctc 13813558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 15061881 - 15061845
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| ||| |||||||||||||||||    
T  15061881 aagttgtcacaaagtggttatacaaatatcatttctc 15061845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 16658474 - 16658438
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||| || |||||||||||||||||||||    
T  16658474 aagttgtcacaatgtggttgtacaaatatcatttctc 16658438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 25098823 - 25098859
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  25098823 aagttgttacaaagtggttgtacaaatatcatttctc 25098859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 26585208 - 26585244
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  26585208 aagttatcacaaaatagttgtacaaatatcatttctc 26585244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 27687543 - 27687579
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  27687543 aagttgtcacaaaatggttgtacaaatatcatttctc 27687579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 29264051 - 29264015
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  29264051 aagttgtcataaagtggttgtacaaatatcatttctc 29264015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 57
Target Start/End: Complemental strand, 32966300 - 32966268
Alignment:
Q  25 ttgtcacaaagtagttgtacaaatatcatttct 57  Q
    |||||||||||| ||||||||||||||||||||    
T  32966300 ttgtcacaaagtggttgtacaaatatcatttct 32966268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 40596078 - 40596114
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  40596078 aagttgtcacaaaatggttgtacaaatatcatttctc 40596114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 40612150 - 40612114
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  40612150 aagttgtcacaaaatggttgtacaaatatcatttctc 40612114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 41507218 - 41507254
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  41507218 aagttgtcacaaaatggttgtacaaatatcatttctc 41507254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 42256496 - 42256460
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  42256496 aagttgtcacaaaatggttgtacaaatatcatttctc 42256460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 45272184 - 45272220
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  45272184 aagttgtcaaaaagtggttgtacaaatatcatttctc 45272220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 48872415 - 48872379
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  48872415 aagttgtcataaagtggttgtacaaatatcatttctc 48872379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 48872985 - 48873021
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  48872985 aagttgtcacaaagtggttgtataaatatcatttctc 48873021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 2e-56; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 69 - 385
Target Start/End: Original strand, 23756472 - 23756791
Alignment:
Q  69 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaatt 168  Q
    |||||||||| || ||  ||||| |||||||| | ||||||| ||||||  | ||||||||||||||| |||   ||| |||||||||||||||||||||    
T  23756472 tagtataatgtaccaaccgttgacattttgatgagatggcccacacttaatacaaatcatttctcttttggcacgcacctatcatcatatatctcaaatt 23756571  T
Q  169 ctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatatt 268  Q
    ||||||| | |||| ||||||||||||||||| ||||||||||  | ||  |||| | ||||||| | || |||||||| |||||||||| ||| |||||    
T  23756572 ctttcttgataatacgaatattatcaagaatcagatgcgaaatttagtgggagattactggttaagtgatcgtttagttgtttatatagaaaaatatatt 23756671  T
Q  269 ttcattgata-ttgaaaatgagaaaatcattctaagtttccataataggaaaaatc-ataaaggacaattattattgctataaatttttataaat-gtgc 365  Q
    || ||||||| ||||||||||||||||||||| ||||||||||||||  ||||||| || |  ||||||||||| ||||| || |||||||| || ||||    
T  23756672 tttattgatatttgaaaatgagaaaatcattcaaagtttccataatataaaaaatcaattagagacaattattaatgctacaactttttatatatggtgc 23756771  T
Q  366 acccactattcaaaaatcct 385  Q
     ||||||||||||| |||||    
T  23756772 ccccactattcaaatatcct 23756791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 181 - 336
Target Start/End: Original strand, 22972847 - 22973002
Alignment:
Q  181 tatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatatt 280  Q
    |||||| |||||||||| || | ||||||||| ||||   ||| | ||||||||| ||||| |||||| ||||||| ||| ||| ||||| ||||| |||    
T  22972847 tatgaagattatcaagactcagttgcgaaatcgaatgggtgatcaatggttaaatgattgtctagttacttatatatagagagagatttttattgagatt 22972946  T
Q  281 gaaaatgagaaaatcattctaagtttccataataggaaaaatcataaaggacaatt 336  Q
    ||||||||||||||||||| |  |||||| |||| || || || || |||||||||    
T  22972947 gaaaatgagaaaatcattcgatatttccaaaatatgacaagtcgtagaggacaatt 22973002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 182 - 299
Target Start/End: Original strand, 33758395 - 33758512
Alignment:
Q  182 atgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattg 281  Q
    |||| ||||||||||||||||||| |||||   ||||| ||| | || |||||| |||||||  ||| |||||| ||||| |||||||| ||||| ||||    
T  33758395 atgagtattatcaagaatcggatgtgaaattggatgaaggataaatgattaaataattgtttgattacttatattgagaatgatatttttattgacattg 33758494  T
Q  282 aaaatgagaaaatcattc 299  Q
    ||||||||||||| ||||    
T  33758495 aaaatgagaaaattattc 33758512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 2469739 - 2469703
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  2469739 aagttgtcacaaagtggttgtacaaatatcatttctc 2469703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 22330655 - 22330691
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  22330655 aagttgtcacaaagtggttgtacaaatatcatttctc 22330691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 58
Target Start/End: Complemental strand, 27778111 - 27778079
Alignment:
Q  26 tgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||||||||||||||||||||||||    
T  27778111 tgtcacaaagtagttgtacaaatatcatttctc 27778079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 37352014 - 37352050
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  37352014 aagttgtcacaaagtggttgtacaaatatcatttctc 37352050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 41077535 - 41077571
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||||||||||||| ||||||||||||||    
T  41077535 aagttgtcacaaagtagttgtaaaaatatcatttctc 41077571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 45607060 - 45607024
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||||| |||||||||||||||||||    
T  45607060 aagttgtcacaaagtagatgtacaaatatcatttctc 45607024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 58
Target Start/End: Complemental strand, 37832485 - 37832450
Alignment:
Q  23 agttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||| |||||||||||||||||||||||    
T  37832485 agttgtcacaaaatagttgtacaaatatcatttctc 37832450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 56
Target Start/End: Complemental strand, 28596942 - 28596908
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttc 56  Q
    ||||||||||||||| |||||||||||||||||||    
T  28596942 aagttgtcacaaagtggttgtacaaatatcatttc 28596908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 56
Target Start/End: Original strand, 32154571 - 32154605
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttc 56  Q
    |||||||||||| ||||||||||||||||||||||    
T  32154571 aagttgtcacaacgtagttgtacaaatatcatttc 32154605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 294
Target Start/End: Original strand, 33338293 - 33338348
Alignment:
Q  237 attgtttagttatttatatagagaaagatattttcattgatattgaaaatgagaaaat 294  Q
    |||||||| |||||||||||||  ||  |||||| |||||||||||||||||||||||    
T  33338293 attgtttaattatttatatagaataa--tatttttattgatattgaaaatgagaaaat 33338348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 80 - 134
Target Start/End: Original strand, 46232378 - 46232432
Alignment:
Q  80 actaatagttgatattttgatcacatggcccccacttatcataaatcatttctct 134  Q
    |||||||||||| |||||||  ||||| ||| ||||||||| |||||||||||||    
T  46232378 actaatagttgacattttgactacatgacccacacttatcacaaatcatttctct 46232432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 23680062 - 23680095
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcattt 55  Q
    ||||||||||||| ||||||||||||||||||||    
T  23680062 aagttgtcacaaaatagttgtacaaatatcattt 23680095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 31982090 - 31982057
Alignment:
Q  25 ttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||| |||||||||||||||||||||    
T  31982090 ttgtcacaaagtggttgtacaaatatcatttctc 31982057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 41966365 - 41966332
Alignment:
Q  25 ttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||| |||||||||||||||||||||    
T  41966365 ttgtcacaaagtggttgtacaaatatcatttctc 41966332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 156017 - 156053
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| | |||||||||||||||||||    
T  156017 aagttgtcacaaagtggatgtacaaatatcatttctc 156053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 1814342 - 1814378
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||| |||| |||||||||||||||||||||||    
T  1814342 aagttgtcgcaaaatagttgtacaaatatcatttctc 1814378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 2347094 - 2347130
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  2347094 aagttgtcacaaaatggttgtacaaatatcatttctc 2347130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 4971326 - 4971290
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  4971326 aagttgtcacaaaatggttgtacaaatatcatttctc 4971290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 7212702 - 7212738
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||| | |||||||||||||||||||||||||||    
T  7212702 aagttgtgaaaaagtagttgtacaaatatcatttctc 7212738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 10591191 - 10591155
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| ||||||||||||||| |||||    
T  10591191 aagttgtcacaaagtggttgtacaaatatcaattctc 10591155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 19426616 - 19426580
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  19426616 aagttgtcacaaaatggttgtacaaatatcatttctc 19426580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 25887630 - 25887594
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| | |||||||||||||||||||    
T  25887630 aagttgtcacaaagtggatgtacaaatatcatttctc 25887594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 26153682 - 26153646
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  26153682 aagttgtcataaaatagttgtacaaatatcatttctc 26153646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 27688684 - 27688648
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  27688684 aagttgtcacatagtagttatacaaatatcatttctc 27688648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 28109993 - 28109957
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  28109993 aagttgtcaaaaagtggttgtacaaatatcatttctc 28109957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 28824539 - 28824503
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  28824539 aagttgtcagaaagtggttgtacaaatatcatttctc 28824503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 30864452 - 30864488
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  30864452 aagttgtcacaaattggttgtacaaatatcatttctc 30864488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 31274564 - 31274600
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  31274564 aagttgtcacaaattggttgtacaaatatcatttctc 31274600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 33050219 - 33050183
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  33050219 aagttgtcacaaaatggttgtacaaatatcatttctc 33050183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 37856189 - 37856225
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  37856189 aagttgtcacaaaatggttgtacaaatatcatttctc 37856225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 40693563 - 40693599
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  40693563 aagttgtcaaaaaatagttgtacaaatatcatttctc 40693599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 43444671 - 43444635
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  43444671 aagttgtcataaagtggttgtacaaatatcatttctc 43444635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 48395284 - 48395248
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  48395284 aagttgtcaaaaagtggttgtacaaatatcatttctc 48395248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 48866965 - 48867001
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| | |||||||||||||||||||    
T  48866965 aagttgtcacaaagtggctgtacaaatatcatttctc 48867001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 49069285 - 49069249
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  49069285 aagttgtcaaaaagtggttgtacaaatatcatttctc 49069249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 69 - 288
Target Start/End: Complemental strand, 13035747 - 13035532
Alignment:
Q  69 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaatt 168  Q
    |||||||||| |  ||||||||| ||||||| |||| | ||| ||||||||| ||||||||| ||| | |||| |||| ||| ||||||||| | ||||     
T  13035747 tagtataatgtaggaatagttgacattttgaccacaagacccacacttatcacaaatcatttatctcttggcccacacctataatcatatatatgaaatc 13035648  T
Q  169 ctttcttaaaaatatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatatt 268  Q
    ||||||| | |||||||||||||||||||||||||||  ||||| | ||  ||||||  |||||||| |||||    ||||||||||||||||| |||||    
T  13035647 ctttcttgataatatgaatattatcaagaatcggatgtcaaatcgagtgggagatgaccggttaaataattgt----ttatttatatagagaaaaatatt 13035552  T
Q  269 ttcattgatattgaaaatga 288  Q
    || |||||||| ||||||||    
T  13035551 tttattgatatcgaaaatga 13035532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 83 - 358
Target Start/End: Original strand, 22087635 - 22087913
Alignment:
Q  83 aatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaattctttcttaaaaata 182  Q
    ||||||||| ||||||| |||||| ||| ||||||||| | ||||||||||||| |||  |||| ||| || ||||||||||| |  |||||| | ||||    
T  22087635 aatagttgacattttgaccacatgacccacacttatcacatatcatttctcttttggctcacacctataattatatatctcaagtcatttcttgataata 22087734  T
Q  183 tgaatattatcaagaatcggatgcgaa-----atcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgat 277  Q
    ||||||||||||||||| | |||| ||     ||  | ||  |||| || |||||||| | |||||| ||| | || || | ||| ||||||| ||||||    
T  22087735 tgaatattatcaagaatagaatgcaaatcgatattgagtgggagataatcggttaaatgactgtttaattaat-atttatataaa-atatttttattgat 22087832  T
Q  278 attgaaaatgagaaaatcattctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttata 358  Q
    |||||||||| ||||||||||| |||||| ||||||| ||||||||||| |||| ||||||||||| || |||||||||||    
T  22087833 attgaaaatgcgaaaatcattcaaagttttcataatatgaaaaatcatagaggataattattattgttacaaatttttata 22087913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 187 - 391
Target Start/End: Original strand, 47551993 - 47552200
Alignment:
Q  187 tattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatat--tttcattgatattgaaa 284  Q
    |||||| || ||| |||| ||||||||| |   |||||| || |||||| |||||||||||||| ||| |||||||  | |  ||| |||||||||||||    
T  47551993 tattatgaaaaattggatacgaaatcaagtcggagatgactgattaaatgattgtttagttattcatacagagaaaagtttctttttattgatattgaaa 47552092  T
Q  285 atgagaaaatcattctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttataaat-gtgcacccactattcaaaaatc 383  Q
    ||||||||||||||| |||||||||||||| ||| |||| ||||||| ||||| || || || ||||||||||| || |||| |||||||||||||||||    
T  47552093 atgagaaaatcattcaaagtttccataatatgaataatcgtaaaggataattactaatgttacaaatttttatatatagtgctcccactattcaaaaatc 47552192  T
Q  384 ctggatcc 391  Q
     |||||||    
T  47552193 atggatcc 47552200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 196 - 299
Target Start/End: Complemental strand, 46732755 - 46732653
Alignment:
Q  196 gaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagaaaatc 295  Q
    ||||| ||||||||||||||||  |||||| ||||||| | |||||||| ||||||||||||| | ||||||||| |||||||||||||||||||||| |    
T  46732755 gaatcagatgcgaaatcaaatgggagatgactggttaattgattgtttaattatttatatagaaagagatatttt-attgatattgaaaatgagaaaaac 46732657  T
Q  296 attc 299  Q
    ||||    
T  46732656 attc 46732653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 192 - 338
Target Start/End: Complemental strand, 27907367 - 27907223
Alignment:
Q  192 tcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagaa 291  Q
    |||||||||||||||||||||  ||   |||||| ||||||||  |||||||||||| ||||||||||  |||||||||  ||| |||||||||||| ||    
T  27907367 tcaagaatcggatgcgaaatcgcataggagatgaatggttaaacaattgtttagttacttatatagag--agatatttttgttggtattgaaaatgaaaa 27907270  T
Q  292 aatcattctaagtttccataataggaaaaatcataaaggacaattat 338  Q
    |||||||| |  ||| || |||| | | |||| ||||||||||||||    
T  27907269 aatcattcaatattttcaaaatatggagaatcgtaaaggacaattat 27907223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 296 - 390
Target Start/End: Original strand, 26333241 - 26333336
Alignment:
Q  296 attctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttataaat-gtgcacccactattcaaaaatcctggatc 390  Q
    |||| |||||||||||||| ||| |||| || ||||||||||||| ||||| ||||||||||| || |||| || |||||||||||||| ||||||    
T  26333241 attcaaagtttccataatatgaataatcgtagaggacaattattaatgctacaaatttttatatatagtgccccgactattcaaaaatcttggatc 26333336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 35747072 - 35747008
Alignment:
Q  148 tatcatcatatatctcaaattctttcttaaaaatatgaatattatcaagaatcggatgcgaaatc 212  Q
    |||||||||||||||||||| ||||||| | ||||||||||||||||| ||| |||||| |||||    
T  35747072 tatcatcatatatctcaaatcctttcttgataatatgaatattatcaaaaattggatgcaaaatc 35747008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 72 - 166
Target Start/End: Original strand, 47551897 - 47551991
Alignment:
Q  72 tataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaa 166  Q
    ||||||| |||||||||||| ||||| ||||||||  || ||||||||| ||||||||||| | | ||||  ||| |||||||| ||||||||||    
T  47551897 tataatgtactaatagttgacattttaatcacatgaaccacacttatcacaaatcatttctttcttggcccgcacttatcatcaaatatctcaaa 47551991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 181 - 394
Target Start/End: Complemental strand, 13028815 - 13028605
Alignment:
Q  181 tatgaatattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatatt 280  Q
    ||||||||||||||||||||||||  |||||| | ||  ||||||   ||||||| |||||    |||| |||||||||| | |||| || ||| || |     
T  13028815 tatgaatattatcaagaatcggatatgaaatcgactggtagatgaccagttaaataattgt----ttatatatatagagataaatatatttattaatttc 13028720  T
Q  281 gaaaatgagaaaatcattctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttataaat-gtgcacccactattcaaa 379  Q
    |||||||||||||| |||| || ||| |||||||  ||||| | || |||| |||||||| ||||  || |||||||| || ||   | |||||||||||    
T  13028719 gaaaatgagaaaatgattcaaaattttcataatattaaaaaacgtagaggataattattaatgcttaaattttttatatatggtatcctcactattcaaa 13028620  T
Q  380 aatcctggatccgtc 394  Q
    |||| ||||||||||    
T  13028619 aatcttggatccgtc 13028605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 51039151 - 51039187
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||||||||||||||||||||||||||||    
T  51039151 aagttgtcacaaagtagttgtacaaatatcatttctc 51039187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 215 - 298
Target Start/End: Original strand, 24368009 - 24368092
Alignment:
Q  215 atgaaagatgattggttaaatcattgtttagttatttatatagagaaagatattttcattgatattgaaaatgagaaaatcatt 298  Q
    ||||||||||| || |||| | ||| |||| ||| |||||| ||||  |||||||| ||||| |||||||||||||||||||||    
T  24368009 atgaaagatgaatgattaattaattatttatttacttatattgagagtgatatttttattgacattgaaaatgagaaaatcatt 24368092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 4896535 - 4896571
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  4896535 aagttgtcacaaagtggttgtacaaatatcatttctc 4896571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 6371016 - 6370980
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  6371016 aagttgtcacaaagtggttgtacaaatatcatttctc 6370980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 11064124 - 11064160
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  11064124 aagttgtcacaaagtggttgtacaaatatcatttctc 11064160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 11997721 - 11997685
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  11997721 aagttgtcacaaagtggttgtacaaatatcatttctc 11997685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 15596432 - 15596396
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  15596432 aagttgtcacaaagtggttgtacaaatatcatttctc 15596396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 22257231 - 22257267
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||||||||| |||||||||||||||    
T  22257231 aagttgtcacaaagtagttgttcaaatatcatttctc 22257267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 26885327 - 26885291
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  26885327 aagttgtcacaaagtggttgtacaaatatcatttctc 26885291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 33093139 - 33093175
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| |||||||||||||||||||||||    
T  33093139 aagttgtcacaaaatagttgtacaaatatcatttctc 33093175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 34116575 - 34116611
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  34116575 aagttgtcacaaagtggttgtacaaatatcatttctc 34116611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 35017189 - 35017153
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| |||||||||||||||||||||||    
T  35017189 aagttgtcacaaaatagttgtacaaatatcatttctc 35017153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 37547101 - 37547065
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  37547101 aagttgtcacaaagtggttgtacaaatatcatttctc 37547065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 41119505 - 41119541
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  41119505 aagttgtcacaaagtggttgtacaaatatcatttctc 41119541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 46173586 - 46173550
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  46173586 aagttgtcacaaagtggttgtacaaatatcatttctc 46173550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 47014975 - 47014939
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| |||||||||||||||||||||||    
T  47014975 aagttgtcacaaaatagttgtacaaatatcatttctc 47014939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 13029076 - 13028978
Alignment:
Q  69 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaat 167  Q
    |||||||||| || ||||||||| ||||||| ||||||  || ||||||||| ||||||||| ||| | || | |||  ||| ||||||||||| ||||    
T  13029076 tagtataatgtacgaatagttgacattttgaccacatgatccacacttatcacaaatcatttatctcttggtccacatctataatcatatatctgaaat 13028978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Original strand, 940297 - 940330
Alignment:
Q  25 ttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||| |||||||||||||||||||||||    
T  940297 ttgtcacaaaatagttgtacaaatatcatttctc 940330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 297
Target Start/End: Original strand, 6495746 - 6495814
Alignment:
Q  231 taaatcattgtttagttatttatata--gagaaagatattttcattgatattgaaaatgagaaaatcat 297  Q
    ||||| |||||||||||| |||||||  |||| ||||||||| ||||| | | ||||||||||||||||    
T  6495746 taaatgattgtttagttacttatatatagagagagatatttttattgagactaaaaatgagaaaatcat 6495814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 12638858 - 12638825
Alignment:
Q  25 ttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||| |||||||||||||||||||||||||||||    
T  12638858 ttgttacaaagtagttgtacaaatatcatttctc 12638825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 26440709 - 26440676
Alignment:
Q  25 ttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||| |||||||||||||||||||||    
T  26440709 ttgtcacaaagtggttgtacaaatatcatttctc 26440676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Complemental strand, 48326588 - 48326555
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcattt 55  Q
    ||||||||||||||| ||||||||||||||||||    
T  48326588 aagttgtcacaaagtggttgtacaaatatcattt 48326555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 169537 - 169573
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  169537 aagttgtcacaaaatggttgtacaaatatcatttctc 169573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 1031791 - 1031755
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  1031791 aagttatcacaaagtggttgtacaaatatcatttctc 1031755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 1796402 - 1796366
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  1796402 aagttgtcacaaattggttgtacaaatatcatttctc 1796366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 5208362 - 5208398
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  5208362 aagttgtcacaaattggttgtacaaatatcatttctc 5208398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 6290498 - 6290462
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  6290498 aagttgttacaaaatagttgtacaaatatcatttctc 6290462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 6953423 - 6953459
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| | |||||||||||||||||||    
T  6953423 aagttgtcacaaagtggatgtacaaatatcatttctc 6953459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 7037519 - 7037555
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  7037519 aagttgtcacaaattggttgtacaaatatcatttctc 7037555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 8455897 - 8455861
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| |||||||||||||| ||||||||    
T  8455897 aagttgtcacaaaatagttgtacaaataacatttctc 8455861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 23347811 - 23347775
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| | |||||||||||||||||||    
T  23347811 aagttgtcacaaagtggatgtacaaatatcatttctc 23347775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 27001444 - 27001480
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  27001444 aagttgtcacaaattggttgtacaaatatcatttctc 27001480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 30042170 - 30042134
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  30042170 aagttgtcacaaaatggttgtacaaatatcatttctc 30042134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 30973633 - 30973597
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  30973633 aagttgtcataaagtggttgtacaaatatcatttctc 30973597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 31240684 - 31240648
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  31240684 aagttatcacaaagtggttgtacaaatatcatttctc 31240648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 32365691 - 32365727
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  32365691 aagttgtcacaaaatggttgtacaaatatcatttctc 32365727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 33278711 - 33278675
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  33278711 aagttgtcacaaaatagttgttcaaatatcatttctc 33278675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 38864771 - 38864807
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| || ||||||||||||||||||||    
T  38864771 aagttgtcacaaaataattgtacaaatatcatttctc 38864807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 39010172 - 39010208
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  39010172 aagttgtcacaaaatggttgtacaaatatcatttctc 39010208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 39241325 - 39241361
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  39241325 aagttgtcacaaattggttgtacaaatatcatttctc 39241361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 40409205 - 40409237
Alignment:
Q  26 tgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| |||||||||||||||||||    
T  40409205 tgtcacaaagtagatgtacaaatatcatttctc 40409237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 41262653 - 41262689
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| || ||||||||||||||||||||    
T  41262653 aagttgtcacaaaataattgtacaaatatcatttctc 41262689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 41495049 - 41495013
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||| | |||||||||||||||||||||||    
T  41495049 aagttgtcacataatagttgtacaaatatcatttctc 41495013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 42490956 - 42490920
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  42490956 aagttgtcaaaaagtggttgtacaaatatcatttctc 42490920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 42815440 - 42815404
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  42815440 aagttgttacaaaatagttgtacaaatatcatttctc 42815404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 42853975 - 42853939
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  42853975 aagttgtcaaaaaatagttgtacaaatatcatttctc 42853939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 44272845 - 44272881
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||| |||||||||||||||||||||||    
T  44272845 aagttgtcaaaaaatagttgtacaaatatcatttctc 44272881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 46566965 - 46566929
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| | |||||||||||||||||||    
T  46566965 aagttgtcacaaagtggatgtacaaatatcatttctc 46566929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 46794536 - 46794572
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  46794536 aagttgtcagaaagtggttgtacaaatatcatttctc 46794572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 48099847 - 48099811
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  48099847 aagttgtcacaaagtggttgtataaatatcatttctc 48099811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 50831791 - 50831827
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  50831791 aagttgtcaaaaagtggttgtacaaatatcatttctc 50831827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 51318739 - 51318703
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  51318739 aagttatcacaaagtggttgtacaaatatcatttctc 51318703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 51359825 - 51359861
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  51359825 aagttgtcacaaaatggttgtacaaatatcatttctc 51359861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 51377328 - 51377364
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  51377328 aagttgtcacaaattggttgtacaaatatcatttctc 51377364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 51389109 - 51389145
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  51389109 aagttgttacaaagtggttgtacaaatatcatttctc 51389145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 51717317 - 51717353
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  51717317 aagttgtcacaaattggttgtacaaatatcatttctc 51717353  T

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Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 52392260 - 52392296
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| | |||||||||||||||||||    
T  52392260 aagttgtcacaaagtggatgtacaaatatcatttctc 52392296  T

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Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 54036553 - 54036589
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  54036553 aagttgtcacaaaatggttgtacaaatatcatttctc 54036589  T

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Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 54801034 - 54800998
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||| ||||||||| |||||||||||||||||||||    
T  54801034 aagttatcacaaagtggttgtacaaatatcatttctc 54800998  T

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Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 55268036 - 55268072
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| | |||||||||||||||||||||    
T  55268036 aagttgtcacaaattggttgtacaaatatcatttctc 55268072  T

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Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 56215641 - 56215605
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  56215641 aagttgtcaaaaagtggttgtacaaatatcatttctc 56215605  T

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Target: scaffold0245 (Bit Score: 47; Significance: 1e-17; HSPs: 3)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 293 - 394
Target Start/End: Complemental strand, 7957 - 7855
Alignment:
Q  293 atcattctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttataaat-gtgcacccactattcaaaaatcctggatcc 391  Q
    ||||||| |||||||||||||| ||| |||  || | ||||||||||| ||||| | ||||||||| || |||| |||||||||||||||||||||||||    
T  7957 atcattcaaagtttccataatatgaataattgtagatgacaattattaatgctacagatttttatatatagtgcccccactattcaaaaatcctggatcc 7858  T
Q  392 gtc 394  Q
    |||    
T  7857 gtc 7855  T

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Target: scaffold0245; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 260
Target Start/End: Complemental strand, 8034 - 7961
Alignment:
Q  187 tattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagaga 260  Q
    |||||| ||||||  ||||||||||||| |    ||||| ||||||||| ||||||||||||||| ||||||||    
T  8034 tattattaagaattagatgcgaaatcaagtaggggatgactggttaaatgattgtttagttatttttatagaga 7961  T

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Target: scaffold0245; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 8132 - 8036
Alignment:
Q  69 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaa 166  Q
    |||||||||| | |||||||||| |||| |||||||||   | ||||||||| ||||||||||| | | |||| |||| | || ||||||||||||||    
T  8132 tagtataatgtattaatagttgacattt-gatcacatgaatcacacttatcacaaatcatttctatcttggcccacacttgtcgtcatatatctcaaa 8036  T

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Target: scaffold0229 (Bit Score: 47; Significance: 1e-17; HSPs: 3)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 293 - 394
Target Start/End: Complemental strand, 8285 - 8183
Alignment:
Q  293 atcattctaagtttccataataggaaaaatcataaaggacaattattattgctataaatttttataaat-gtgcacccactattcaaaaatcctggatcc 391  Q
    ||||||| |||||||||||||| ||| |||  || | ||||||||||| ||||| | ||||||||| || |||| |||||||||||||||||||||||||    
T  8285 atcattcaaagtttccataatatgaataattgtagatgacaattattaatgctacagatttttatatatagtgcccccactattcaaaaatcctggatcc 8186  T
Q  392 gtc 394  Q
    |||    
T  8185 gtc 8183  T

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Target: scaffold0229; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 260
Target Start/End: Complemental strand, 8362 - 8289
Alignment:
Q  187 tattatcaagaatcggatgcgaaatcaaatgaaagatgattggttaaatcattgtttagttatttatatagaga 260  Q
    |||||| ||||||  ||||||||||||| |    ||||| ||||||||| ||||||||||||||| ||||||||    
T  8362 tattattaagaattagatgcgaaatcaagtaggggatgactggttaaatgattgtttagttatttttatagaga 8289  T

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Target: scaffold0229; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 8460 - 8364
Alignment:
Q  69 tagtataatgcactaatagttgatattttgatcacatggcccccacttatcataaatcatttctctttcggcctacacatatcatcatatatctcaaa 166  Q
    |||||||||| | |||||||||| |||| |||||||||   | ||||||||| ||||||||||| | | |||| |||| | || ||||||||||||||    
T  8460 tagtataatgtattaatagttgacattt-gatcacatgaatcacacttatcacaaatcatttctatcttggcccacacttgtcgtcatatatctcaaa 8364  T

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Target: scaffold0662 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 1114 - 1078
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| |||||||||||||||||||||||    
T  1114 aagttgtcacaaaatagttgtacaaatatcatttctc 1078  T

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Target: scaffold0508 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 11571 - 11607
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||||| |||||||||||||||||||    
T  11571 aagttgtcacaaagtagatgtacaaatatcatttctc 11607  T

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Target: scaffold0154 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 19726 - 19762
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||| |||||||||||||||||||||||    
T  19726 aagttgtcacaaaatagttgtacaaatatcatttctc 19762  T

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Target: scaffold0026 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 113661 - 113625
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  113661 aagttgtcacaaagtggttgtacaaatatcatttctc 113625  T

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Target: scaffold0011 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Original strand, 219699 - 219735
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||||||||| |||||||||||||||||||||    
T  219699 aagttgtcacaaagtggttgtacaaatatcatttctc 219735  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 440754 - 440718
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttctc 58  Q
    ||||||||| |||||||||||||||||||||||||||    
T  440754 aagttgtcataaagtagttgtacaaatatcatttctc 440718  T

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Target: scaffold0131 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 57
Target Start/End: Original strand, 15569 - 15604
Alignment:
Q  22 aagttgtcacaaagtagttgtacaaatatcatttct 57  Q
    ||||||||||||||| ||||||||||||||||||||    
T  15569 aagttgtcacaaagtggttgtacaaatatcatttct 15604  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 58
Target Start/End: Complemental strand, 36032 - 36002
Alignment:
Q  28 tcacaaagtagttgtacaaatatcatttctc 58  Q
    |||||||||||||||||||||||||||||||    
T  36032 tcacaaagtagttgtacaaatatcatttctc 36002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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