View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3451_low_1 (Length: 599)
Name: NF3451_low_1
Description: NF3451
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3451_low_1 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 548; Significance: 0; HSPs: 34)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 548; E-Value: 0
Query Start/End: Original strand, 14 - 597
Target Start/End: Original strand, 29577864 - 29578447
Alignment:
| Q |
14 |
agagggcactttcgtatgacattgaggccacaattgacatagatgctatatgtcagggtattgacttctgctcatcaattactcgggcgaaatttgagcg |
113 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29577864 |
agagggcactttcatatgacattgaggccacaattgacatagatgctatatgtcagggtattgacttctgctcatcaattactcgggcgaaatttgagcg |
29577963 |
T |
|
| Q |
114 |
actcaacatggacctctttgaaaaatgtaaggagattgttcggagttgtctacgtgatgcttacatggaccagagtatggtacatgaaattgtccttgtt |
213 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29577964 |
actcaacatggacctctttgaaaaatgtatggagattgttcggagttgtctacgtgatgcttacatggaccagagtatggtacatgaaattgtccttgtt |
29578063 |
T |
|
| Q |
214 |
ggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacgaggctgttgctt |
313 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
29578064 |
ggaggttcatctagaattcccaaagtgcggaaactattgcaagactttttcaagggtagggatttgtgcatgagcataaaccctgacgaggctgttgctt |
29578163 |
T |
|
| Q |
314 |
atggtgcagctgtgcaggctgctttgttgattgatggcatcaagaatgttccaaatttggtcttgtgagatattacacccttgtcgcttggtatatggac |
413 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
29578164 |
atggtgcagctgtgcaggctgctttgttgattgatggcattaagaatgttccaaatttggtcttgcgagatattacacccttgtcgcttggtatatggac |
29578263 |
T |
|
| Q |
414 |
aaaaggagatgtcatgagtgtagtgattcctaagaacactccaattcctattaagatgactgaggatagatgtaagacaagtgtagataaccaacttggt |
513 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29578264 |
aaaaggagatgtcatgagtgtagtgattcctaagaacactccaattcctattaagatgactgaggatagatgtaagacaagtgtagataaccaacttggt |
29578363 |
T |
|
| Q |
514 |
gtatccatccatgtttatgagggtgagagaataaaagccagtgagaacaacttgttgggtttgtttcgtctctctgctcctcct |
597 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
29578364 |
gtatccatccatgtttatgagggtgagagaataaaagccagtgagaacaacttgttgggtttgtttcgtctctttgttcctcct |
29578447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 14 - 586
Target Start/End: Original strand, 29582033 - 29582605
Alignment:
| Q |
14 |
agagggcactttcgtatgacattgaggccacaattgacatagatgctatatgtcagggtattgacttctgctcatcaattactcgggcgaaatttgagcg |
113 |
Q |
| |
|
||||| ||||||| | |||||||||| ||||||||||| ||||||| || ||||| |||||||| ||||||||| || |||||||||| || ||||||| |
|
|
| T |
29582033 |
agaggacactttcatttgacattgagaccacaattgacgtagatgccatttgtcaaggtattgatttctgctcaccagttactcgggccaagtttgagca |
29582132 |
T |
|
| Q |
114 |
actcaacatggacctctttgaaaaatgtaaggagattgttcggagttgtctacgtgatgcttacatggaccagagtatggtacatgaaattgtccttgtt |
213 |
Q |
| |
|
| ||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||||| |||||| | |||||| ||| |||| || |||||| || |
|
|
| T |
29582133 |
aatcaacatcgacctctttgaaaaatgtatggagattgttgggagttgtctacgtgatgctaacatggtcaagagtagtgtagatgatatcgtccttatt |
29582232 |
T |
|
| Q |
214 |
ggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacgaggctgttgctt |
313 |
Q |
| |
|
|| || || ||||||||||||||| ||| | ||||||||||| ||||||||||| | |||||||||||||||||| ||||| || ||||||||||||| |
|
|
| T |
29582233 |
ggtggctcttctagaattcccaaagtgcatcagctattgcaagaatttttcaaggggaaggatttgtgcatgagcatcaaccctgatgaggctgttgctt |
29582332 |
T |
|
| Q |
314 |
atggtgcagctgtgcaggctgctttgttgattgatggcatcaagaatgttccaaatttggtcttgtgagatattacacccttgtcgcttggtatatggac |
413 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| ||||| ||||||||||| |||| ||||| |||||||||||||||||| |||||||||| || |
|
|
| T |
29582333 |
atggtgcagctgtgcaggctgctttgctgattgaaggcattgagaatgttccagattttatcttgcaagatattacacccttgtcacttggtatatcaac |
29582432 |
T |
|
| Q |
414 |
aaaaggagatgtcatgagtgtagtgattcctaagaacactccaattcctattaagatgactgaggatagatgtaagacaagtgtagataaccaacttggt |
513 |
Q |
| |
|
|||||||||| |||||||||| |||||||||| ||||||||| |||||| |||||||| || || ||||||||||||||||||||||||||| ||||| |
|
|
| T |
29582433 |
aaaaggagatatcatgagtgtggtgattcctaggaacactcccattcctgccaagatgacagaagaaagatgtaagacaagtgtagataaccaatttggt |
29582532 |
T |
|
| Q |
514 |
gtatccatccatgtttatgagggtgagagaataaaagccagtgagaacaacttgttgggtttgtttcgtctct |
586 |
Q |
| |
|
|| || || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
29582533 |
gtctcaattaatgtttatgagggtgagagaataaaagccagtgagaacaacttgctgggtttgtttagtctct |
29582605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 14 - 443
Target Start/End: Complemental strand, 8609893 - 8609464
Alignment:
| Q |
14 |
agagggcactttcgtatgacattgaggccacaattgacatagatgctatatgtcagggtattgacttctgctcatcaattactcgggcgaaatttgagcg |
113 |
Q |
| |
|
||||| ||||||| | ||||| |||||||||||||| || |||||||||| | |||||||||| || || |||||||| ||||| ||||| ||||||| |
|
|
| T |
8609893 |
agaggacactttcatttgacacggaggccacaattgatattgatgctatatctgagggtattgatttttgttcatcaatcactcgtgcgaagtttgagca |
8609794 |
T |
|
| Q |
114 |
actcaacatggacctctttgaaaaatgtaaggagattgttcggagttgtctacgtgatgcttacatggaccagagtatggtacatgaaattgtccttgtt |
213 |
Q |
| |
|
||| |||||||||||||||||||| |||| ||||| ||| || ||||| ||||||| | ||||| ||| | ||| |||| |||| |||||| |
|
|
| T |
8609793 |
acttaacatggacctctttgaaaagtgtatggagacggttgaaagatgtcttactgatgctgaaatggataagaaaaccgtagatgatgttgttcttgtt |
8609694 |
T |
|
| Q |
214 |
ggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacgaggctgttgctt |
313 |
Q |
| |
|
|||||||| ||||| ||||| ||| || | | ||| |||||||||||||||| || | ||||||||| |||||||| ||||| || ||||| ||||||| |
|
|
| T |
8609693 |
ggaggttcttctaggattccgaaagtgaagcagctactgcaagactttttcaatggaaaggatttgtgtatgagcatcaaccctgatgaggcggttgctt |
8609594 |
T |
|
| Q |
314 |
atggtgcagctgtgcaggctgctttgttgattgatggcatcaagaatgttccaaatttggtcttgtgagatattacacccttgtcgcttggtatatggac |
413 |
Q |
| |
|
||||||| ||||| ||||||||||||||| ||| |||||||| |||||||| ||||| || ||||| ||||||| ||||| |||||||||| || |
|
|
| T |
8609593 |
atggtgctgctgtccaggctgctttgttgggtgaaggcatcaaatcagttccaaacttggtgctgcgagatgttacacctttgtcacttggtatatcgat |
8609494 |
T |
|
| Q |
414 |
aaaaggagatgtcatgagtgtagtgattcc |
443 |
Q |
| |
|
|||||||||||| ||||||||| ||||||| |
|
|
| T |
8609493 |
aaaaggagatgtgatgagtgtattgattcc |
8609464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 178 - 453
Target Start/End: Complemental strand, 6789324 - 6789049
Alignment:
| Q |
178 |
atggaccagagtatggtacatgaaattgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatt |
277 |
Q |
| |
|
|||||| ||||||| ||| |||| ||||||||||||| || || ||||||||||||||| ||| ||||||||||||| |||||| ||| | ||||| |
|
|
| T |
6789324 |
atggacaagagtattgtaaatgatgttgtccttgttggtgggtcttctagaattcccaaagtgcaacaactattgcaagaagttttcatgggaaaggatt |
6789225 |
T |
|
| Q |
278 |
tgtgcatgagcataaaccccgacgaggctgttgcttatggtgcagctgtgcaggctgctttgttgattgatggcatcaagaatgttccaaatttggtctt |
377 |
Q |
| |
|
||||||||||||| ||||| || |||||||||||||| ||||||||||| |||||||||||||||| || ||| |||| ||||||||| ||||| | |
|
|
| T |
6789224 |
tgtgcatgagcatcaaccctgatgaggctgttgcttacggtgcagctgtccaggctgctttgttgagcgaaggctctaagagtgttccaaacttggtgct |
6789125 |
T |
|
| Q |
378 |
gtgagatattacacccttgtcgcttggtatatgga-caaaaggagatgtcatgagtgtagtgattcctaagaacact |
453 |
Q |
| |
|
| |||| ||||||| ||||| ||||||| | | | || |||| ||||||||||||| |||||||||| ||||||| |
|
|
| T |
6789124 |
gcaagatgttacaccgttgtctcttggta-aggcagtaataggaaatgtcatgagtgtggtgattcctaggaacact |
6789049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 20 - 405
Target Start/End: Complemental strand, 8581670 - 8581285
Alignment:
| Q |
20 |
cactttcgtatgacattgaggccacaattgacatagatgctatatgtcagggtattgacttctgctcatcaattactcgggcgaaatttgagcgactcaa |
119 |
Q |
| |
|
||||||| ||||||| |||||||||||||||| ||||| ||||| ||| ||||||||||||| || ||||| |||||||| || ||||||| | | || |
|
|
| T |
8581670 |
cactttcatatgacactgaggccacaattgacctagattctatacatcaaggtattgacttctattcgtcaataactcgggccaagtttgagcaaatgaa |
8581571 |
T |
|
| Q |
120 |
catggacctctttgaaaaatgtaaggagattgttcggagttgtctacgtgatgcttacatggaccagagtatggtacatgaaattgtccttgttggaggt |
219 |
Q |
| |
|
||| ||||||||||||| |||| ||| | |||| |||||||| |||||| | |||||| | ||| ||| |||| ||||||||||||| ||| |
|
|
| T |
8581570 |
tatgaacctctttgaaaagtgtatggacactgttaatagttgtcttgccgatgctaagatggacaggggtagtgtagatgatgttgtccttgttggtggt |
8581471 |
T |
|
| Q |
220 |
tcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacgaggctgttgcttatggtg |
319 |
Q |
| |
|
|| ||||| ||||| ||| || | | ||||| || || |||||| |||| | ||| || |||| |||||| ||||| || ||||||||||||||||||| |
|
|
| T |
8581470 |
tcttctaggattcctaaagtgagacagctattacaggagtttttccaggggaaggaattatgcaagagcatcaaccctgatgaggctgttgcttatggtg |
8581371 |
T |
|
| Q |
320 |
cagctgtgcaggctgctttgttgattgatggcatcaagaatgttccaaatttggtcttgtgagatattacacccttgtcgcttggt |
405 |
Q |
| |
|
| ||| | |||||||||||| | | ||| ||||| |||| ||||||||| ||| | ||| ||||| ||||||| ||||| |||||| |
|
|
| T |
8581370 |
ctgctattcaggctgctttggttagtgaaggcattaagagtgttccaaacttgattttgcgagatgttacaccattgtcacttggt |
8581285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 20 - 368
Target Start/End: Complemental strand, 8545603 - 8545255
Alignment:
| Q |
20 |
cactttcgtatgacattgaggccacaattgacatagatgctatatgtcagggtattgacttctgctcatcaattactcgggcgaaatttgagcgactcaa |
119 |
Q |
| |
|
||||||| || |||| |||||||||||||||| |||||||| ||| ||| ||||||||||| || |||| || |||||||| || ||||||| | | || |
|
|
| T |
8545603 |
cactttcatacgacactgaggccacaattgacctagatgctttatatcaaggtattgacttttgttcatgcatcactcgggccaagtttgagcaattgaa |
8545504 |
T |
|
| Q |
120 |
catggacctctttgaaaaatgtaaggagattgttcggagttgtctacgtgatgcttacatggaccagagtatggtacatgaaattgtccttgttggaggt |
219 |
Q |
| |
|
||||||||||||||||| |||| ||| | |||| ||||||| ||||||| | |||||| || ||| ||| |||| ||||||||||||| ||| |
|
|
| T |
8545503 |
tatggacctctttgaaaagtgtatggacactgttaattgttgtcttgttgatgctaagatggacaagggtagtgtagatgatgttgtccttgttggcggt |
8545404 |
T |
|
| Q |
220 |
tcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacgaggctgttgcttatggtg |
319 |
Q |
| |
|
|| ||||| ||||| ||| || | | ||||| || || ||||| ||||| | ||| || |||| |||||| ||||| || ||||||||||||||||||| |
|
|
| T |
8545403 |
tcttctaggattcctaaagtgagacagctattacaggagttttttaaggggaaggaattatgcaagagcattaaccctgatgaggctgttgcttatggtg |
8545304 |
T |
|
| Q |
320 |
cagctgtgcaggctgctttgttgattgatggcatcaagaatgttccaaa |
368 |
Q |
| |
|
||||||| |||||||||||| ||| ||| | || |||||||| ||||| |
|
|
| T |
8545303 |
cagctgtccaggctgctttgctgagtgaagacaataagaatgtcccaaa |
8545255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 20 - 405
Target Start/End: Complemental strand, 8576296 - 8575911
Alignment:
| Q |
20 |
cactttcgtatgacattgaggccacaattgacatagatgctatatgtcagggtattgacttctgctcatcaattactcgggcgaaatttgagcgactcaa |
119 |
Q |
| |
|
||||||| ||||||| ||| ||||||||||| |||||||||||| | | |||||||||||||| || ||||| || ||||| || |||||| | | || |
|
|
| T |
8576296 |
cactttcatatgacactgatgccacaattgaactagatgctatatataaaggtattgacttctgttcctcaataacccgggccaagtttgaggaaatgaa |
8576197 |
T |
|
| Q |
120 |
catggacctctttgaaaaatgtaaggagattgttcggagttgtctacgtgatgcttacatggaccagagtatggtacatgaaattgtccttgttggaggt |
219 |
Q |
| |
|
||| ||||||||||||| |||| | | | |||| | |||||| ||||||| | |||||| ||| || ||| |||| ||||||||||||| ||| |
|
|
| T |
8576196 |
tatgaacctctttgaaaagtgtatgaatactgttaatatttgtcttgctgatgctaagatggacaagaatagtgtagatgatgttgtccttgttggtggt |
8576097 |
T |
|
| Q |
220 |
tcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacgaggctgttgcttatggtg |
319 |
Q |
| |
|
|| ||||| ||||| ||| || | | ||||| || || |||||||||| | ||| || || | |||||| ||||| || ||||||||||||||||||| |
|
|
| T |
8576096 |
tcttctaggattcctaaagtgagacagctattacaggaggttttcaaggggaaggaattatgtaagagcatcaaccctgatgaggctgttgcttatggtg |
8575997 |
T |
|
| Q |
320 |
cagctgtgcaggctgctttgttgattgatggcatcaagaatgttccaaatttggtcttgtgagatattacacccttgtcgcttggt |
405 |
Q |
| |
|
| | ||| || ||||||||||||| ||| |||| |||||||||||||| ||||| || ||||| ||||||| |||||| ||||| |
|
|
| T |
8575996 |
ctgttgtccaagctgctttgttgagtgaaggcagtaagaatgttccaaacttggtgttacgagatgttacaccgttgtcgtttggt |
8575911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 203 - 374
Target Start/End: Original strand, 27831256 - 27831427
Alignment:
| Q |
203 |
ttgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacga |
302 |
Q |
| |
|
||||||||||||| || || || || ||||||||| ||| | | |||||| |||||||||||||| | ||||||||||| |||||| || || || || |
|
|
| T |
27831256 |
ttgtccttgttggtggctcttcaaggattcccaaagtgcagcagctattggcggactttttcaagggaaaggatttgtgcaagagcatcaatcctgatga |
27831355 |
T |
|
| Q |
303 |
ggctgttgcttatggtgcagctgtgcaggctgctttgttgattgatggcatcaagaatgttccaaatttggt |
374 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||| ||||| ||| | |||||||||||| ||||| |
|
|
| T |
27831356 |
ggctgttgcttttggtgcagctgtgcaggctgctttgttgagtgatgacattatgaatgttccaaacttggt |
27831427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 22 - 343
Target Start/End: Complemental strand, 8538004 - 8537683
Alignment:
| Q |
22 |
ctttcgtatgacattgaggccacaattgacatagatgctatatgtcagggtattgacttctgctcatcaattactcgggcgaaatttgagcgactcaaca |
121 |
Q |
| |
|
||||| || |||| ||| ||||||||||| ||||||||||||||||||||| |||| ||||| |||||||| |||||||| || ||||||| |||||||| |
|
|
| T |
8538004 |
ctttcttacgacactgaagccacaattgatatagatgctatatgtcagggtgttgatttctgttcatcaatcactcgggccaagtttgagcaactcaaca |
8537905 |
T |
|
| Q |
122 |
tggacctctttgaaaaatgtaaggagattgttcggagttgtctacgtgatgcttacatggaccagagtatggtacatgaaattgtccttgttggaggttc |
221 |
Q |
| |
|
|||||||||||||||| |||| | | | |||| ||||||| | ||||||| | |||||| |||| | |||| |||| || ||||| || || |
|
|
| T |
8537904 |
tggacctctttgaaaagtgtatgaaaactgttaagagttgttttaatgatgctaagatggacagtagtagtatggatgatgttgtactagttggtggctc |
8537805 |
T |
|
| Q |
222 |
atctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacgaggctgttgcttatggtgca |
321 |
Q |
| |
|
||||| ||||||||| ||| || || ||||| ||||||||| ||| | |||| | | | ||||| ||||| || || ||||||||||||||||| |
|
|
| T |
8537804 |
ttctaggattcccaaagtgcagagtctgctgcaaaactttttcagggggaaggatatttttaaaagcatcaaccctgatgaagctgttgcttatggtgct |
8537705 |
T |
|
| Q |
322 |
gctgtgcaggctgctttgttga |
343 |
Q |
| |
|
||||| |||||||||||||||| |
|
|
| T |
8537704 |
gctgtccaggctgctttgttga |
8537683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 20 - 405
Target Start/End: Complemental strand, 8570281 - 8569896
Alignment:
| Q |
20 |
cactttcgtatgacattgaggccacaattgacatagatgctatatgtcagggtattgacttctgctcatcaattactcgggcgaaatttgagcgactcaa |
119 |
Q |
| |
|
||||||| ||||| | ||||||||||||||| |||||||||||| | |||| ||||||||| | |||||||| || ||||| || |||||| | | || |
|
|
| T |
8570281 |
cactttcatatgatactgaggccacaattgagctagatgctatatataagggaattgacttcagttcatcaataacccgggccaagtttgaggaaatgaa |
8570182 |
T |
|
| Q |
120 |
catggacctctttgaaaaatgtaaggagattgttcggagttgtctacgtgatgcttacatggaccagagtatggtacatgaaattgtccttgttggaggt |
219 |
Q |
| |
|
||| ||||||||||||| |||| ||| | |||| |||||||| ||||||| | ||||| ||| || ||| |||| ||||||||||||| ||| |
|
|
| T |
8570181 |
tatgaacctctttgaaaagtgtatggaaactgttaatagttgtcttgctgatgctaagatggaaaagaatagtgtagatgatgttgtccttgttggtggt |
8570082 |
T |
|
| Q |
220 |
tcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacgaggctgttgcttatggtg |
319 |
Q |
| |
|
|| ||||| ||||| ||| || || | ||||| ||||| |||||| |||| | ||| || |||| ||||| ||||| || |||||||||||||| |||| |
|
|
| T |
8570081 |
tcttctaggattcctaaagtgaggcagctattacaagagtttttccaggggaaggaattatgcaacagcattaaccctgatgaggctgttgcttacggtg |
8569982 |
T |
|
| Q |
320 |
cagctgtgcaggctgctttgttgattgatggcatcaagaatgttccaaatttggtcttgtgagatattacacccttgtcgcttggt |
405 |
Q |
| |
|
||||| | ||||||| |||| | ||| || | |||| ||||||||| ||||| ||| ||||| ||||||| ||||| |||||| |
|
|
| T |
8569981 |
cagctattcaggctgttttgcatagtgaaagcgttaagagtgttccaaacttggttttgcgagatgttacaccattgtcacttggt |
8569896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 203 - 374
Target Start/End: Complemental strand, 17260028 - 17259857
Alignment:
| Q |
203 |
ttgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacga |
302 |
Q |
| |
|
||||||||||||| || || ||||| ||||| ||| ||| | |||||||||| || || |||||||||| ||| || |||| |||||| ||||| || || |
|
|
| T |
17260028 |
ttgtccttgttggtggatcttctaggattccgaaagtgcagcaactattgcaggatttcttcaagggtaaggaattatgcaagagcatcaaccctgatga |
17259929 |
T |
|
| Q |
303 |
ggctgttgcttatggtgcagctgtgcaggctgctttgttgattgatggcatcaagaatgttccaaatttggt |
374 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||||||| | || || |||||||||||||||| ||||| |
|
|
| T |
17259928 |
ggctgttgcttatggtgctgctgttcaggctgctttgttaagtggaagcgtcaagaatgttccaaacttggt |
17259857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 38 - 151
Target Start/End: Complemental strand, 8559280 - 8559167
Alignment:
| Q |
38 |
aggccacaattgacatagatgctatatgtcagggtattgacttctgctcatcaattactcgggcgaaatttgagcgactcaacatggacctctttgaaaa |
137 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| || |||||||| || ||||| || ||||||| ||| || ||||| ||||||||||| |
|
|
| T |
8559280 |
aggccacaattgacatagatgctatatgtcagggcattgacttgtgttcatcaatcacacgggctaagtttgagcaactgaatatggatctctttgaaaa |
8559181 |
T |
|
| Q |
138 |
atgtaaggagattg |
151 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
8559180 |
gtgtatggagattg |
8559167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 203 - 404
Target Start/End: Original strand, 7878114 - 7878315
Alignment:
| Q |
203 |
ttgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacga |
302 |
Q |
| |
|
|||| |||||||| || |||||||| |||| |||| ||| | | |||||||| |||||||| ||||| | |||| | |||| ||||| ||||| || || |
|
|
| T |
7878114 |
ttgtacttgttggtggatcatctaggattctcaaagtgcagcagctattgcaggacttttttaaggggaaggatatttgcagtagcatcaacccggatga |
7878213 |
T |
|
| Q |
303 |
ggctgttgcttatggtgcagctgtgcaggctgctttgttgattgatggcatcaagaatgttccaaatttggtcttgtgagatattacacccttgtcgctt |
402 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| || | |||||| || ||||||||||| |||||||| ||| |||| |||| || ||||| ||| |
|
|
| T |
7878214 |
agctgttgcttatggtgcagctgttcaggctgctctgctttgtgatggtattaagaatgttcctaatttggtgttgcaagatgttactccattgtctctt |
7878313 |
T |
|
| Q |
403 |
gg |
404 |
Q |
| |
|
|| |
|
|
| T |
7878314 |
gg |
7878315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 203 - 374
Target Start/End: Complemental strand, 8590425 - 8590254
Alignment:
| Q |
203 |
ttgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacga |
302 |
Q |
| |
|
|||| |||||||| ||||| ||||| ||||||||| ||| | | ||||||||||||||||| | ||| | |||| | | || ||||| || || || || |
|
|
| T |
8590425 |
ttgtacttgttggtggttcttctaggattcccaaagtgcagcagctattgcaagacttttttatggggaaggatctttacaatagcatcaatccagatga |
8590326 |
T |
|
| Q |
303 |
ggctgttgcttatggtgcagctgtgcaggctgctttgttgattgatggcatcaagaatgttccaaatttggt |
374 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||||| | |||||| || ||||||||||| |||||||| |
|
|
| T |
8590325 |
ggctgttgcttatggtgcagctgttcaagctgctttgctttgtgatgggattaagaatgttcctaatttggt |
8590254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 203 - 374
Target Start/End: Complemental strand, 17267726 - 17267555
Alignment:
| Q |
203 |
ttgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacga |
302 |
Q |
| |
|
||||||||||||| || || ||||| ||||| ||| ||| | |||||||||| |||| |||||||| | ||| || |||| || || ||||| || || |
|
|
| T |
17267726 |
ttgtccttgttggtgggtcttctaggattccgaaagtgcagcaactattgcagaacttcttcaaggggaaggaattatgcaaaagtatcaaccctgatga |
17267627 |
T |
|
| Q |
303 |
ggctgttgcttatggtgcagctgtgcaggctgctttgttgattgatggcatcaagaatgttccaaatttggt |
374 |
Q |
| |
|
|||||||||||||||||| ||||| |||||||||||||| | || || |||||||||||||||| ||||| |
|
|
| T |
17267626 |
ggctgttgcttatggtgctgctgttcaggctgctttgttaagtggaagcgtcaagaatgttccaaacttggt |
17267555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 285 - 368
Target Start/End: Original strand, 27846569 - 27846652
Alignment:
| Q |
285 |
gagcataaaccccgacgaggctgttgcttatggtgcagctgtgcaggctgctttgttgattgatggcatcaagaatgttccaaa |
368 |
Q |
| |
|
|||||| ||||| || ||||||||||||| ||| ||||||||||||||||||||||||| ||||| ||| |||||||||||||| |
|
|
| T |
27846569 |
gagcatcaaccctgatgaggctgttgcttttggagcagctgtgcaggctgctttgttgagtgatgacattaagaatgttccaaa |
27846652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 203 - 336
Target Start/End: Complemental strand, 8102454 - 8102321
Alignment:
| Q |
203 |
ttgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacga |
302 |
Q |
| |
|
|||| |||||||| |||||| |||| ||||||||| | | | |||| ||||||||||| ||||| |||| ||| | |||| ||||| ||||||||||| |
|
|
| T |
8102454 |
ttgttcttgttggtggttcaactaggattcccaaagttcagcaactgttgcaagacttcttcaatggtaaggagctatgcaaaagcatcaaccccgacga |
8102355 |
T |
|
| Q |
303 |
ggctgttgcttatggtgcagctgtgcaggctgct |
336 |
Q |
| |
|
|||||||||||||||||| ||||| || |||||| |
|
|
| T |
8102354 |
ggctgttgcttatggtgccgctgttcaagctgct |
8102321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 20 - 323
Target Start/End: Original strand, 8383074 - 8383377
Alignment:
| Q |
20 |
cactttcgtatgacattgaggccacaattgacatagatgctatatgtcagggtattgacttctgctcatcaattactcgggcgaaatttgagcgactcaa |
119 |
Q |
| |
|
||||||| | ||| ||||||||| | ||||||||||||||| | | | |||||||||| || || ||| | |||||||| |||||||||| |||||| |
|
|
| T |
8383074 |
cactttcatttgatattgaggccgcgattgacatagatgctctgtatgagggtattgattttaattcttcagtcactcgggccaaatttgagcaactcaa |
8383173 |
T |
|
| Q |
120 |
catggacctctttgaaaaatgtaaggagattgttcggagttgtctacgtgatgcttacatggaccagagtatggtacatgaaattgtccttgttggaggt |
219 |
Q |
| |
|
|||||||| |||||||| |||| ||||| |||| ||| ||||| ||||||| | ||| || |||||| ||| |||| |||| || | || ||| |
|
|
| T |
8383174 |
tatggacctatttgaaaagtgtatggagactgttgagagctgtcttactgatgctaagatgaacaagagtagtgtagatgatgttgttctcatcggtggt |
8383273 |
T |
|
| Q |
220 |
tcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacgaggctgttgcttatggtg |
319 |
Q |
| |
|
|| || || ||||||||| ||| | ||||||||| |||||||||| | | ||| | || |||||||||| || |||||||||||||||||||||| |
|
|
| T |
8383274 |
tcttcgaggattcccaaagtgcaagagctattgcaacactttttcaattggaaggacctttgtgtgagcataaatcctgacgaggctgttgcttatggtg |
8383373 |
T |
|
| Q |
320 |
cagc |
323 |
Q |
| |
|
|||| |
|
|
| T |
8383374 |
cagc |
8383377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 197 - 407
Target Start/End: Original strand, 10494749 - 10494959
Alignment:
| Q |
197 |
atgaaattgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccc |
296 |
Q |
| |
|
|||| ||||| ||||| || || || ||||| ||||||||| ||| | | ||||||| ||| ||||||||||| | ||| || | |||| | || ||||| |
|
|
| T |
10494749 |
atgatattgttcttgtgggtggctcgtctaggattcccaaagtgcaggatctattgctagaatttttcaaggggaaggaattattcatgcgtatcaaccc |
10494848 |
T |
|
| Q |
297 |
cgacgaggctgttgcttatggtgcagctgtgcaggctgctttgttgattgatggcatcaagaatgttccaaatttggtcttgtgagatattacacccttg |
396 |
Q |
| |
|
|| |||||||||||||||||||||||||| ||||||||| | |||| ||| ||| | |||||||| || || ||||| | ||||| |||| || ||| |
|
|
| T |
10494849 |
agatgaggctgttgcttatggtgcagctgttcaggctgctattttgagtgaaggctttaagaatgtcccgaacttggtgctacgagatgttaccccattg |
10494948 |
T |
|
| Q |
397 |
tcgcttggtat |
407 |
Q |
| |
|
|| |||||||| |
|
|
| T |
10494949 |
tcacttggtat |
10494959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 526 - 575
Target Start/End: Complemental strand, 8537503 - 8537454
Alignment:
| Q |
526 |
gtttatgagggtgagagaataaaagccagtgagaacaacttgttgggttt |
575 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
8537503 |
gtttatgagggtgagagaatgaaagccagtgagaacaacttgttgggttt |
8537454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 223 - 336
Target Start/End: Complemental strand, 8667186 - 8667073
Alignment:
| Q |
223 |
tctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacgaggctgttgcttatggtgcag |
322 |
Q |
| |
|
||||| ||||||||| ||| | ||| ||||| ||| | ||||||||| | ||| || | |||| | || ||||| ||||||||||||||||||||||||| |
|
|
| T |
8667186 |
tctaggattcccaaagtgcaggaacaattgctagaatatttcaaggggaaggaattattcatgggtatcaacccagacgaggctgttgcttatggtgcag |
8667087 |
T |
|
| Q |
323 |
ctgtgcaggctgct |
336 |
Q |
| |
|
|||| ||||||||| |
|
|
| T |
8667086 |
ctgttcaggctgct |
8667073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 286 - 374
Target Start/End: Complemental strand, 3146968 - 3146880
Alignment:
| Q |
286 |
agcataaaccccgacgaggctgttgcttatggtgcagctgtgcaggctgctttgttgattgatggcatcaagaatgttccaaatttggt |
374 |
Q |
| |
|
||||| ||||| || ||||| ||||||||||||||||||||||| ||||||||||||| ||| | | | || ||||||||||| ||||| |
|
|
| T |
3146968 |
agcatcaaccctgatgaggccgttgcttatggtgcagctgtgcaagctgctttgttgagtgaagactttaaaaatgttccaaacttggt |
3146880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 326
Target Start/End: Original strand, 8017794 - 8017917
Alignment:
| Q |
203 |
ttgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacga |
302 |
Q |
| |
|
|||| |||||||| |||||| |||||||||||||| | | | |||| |||||||| || ||||| |||| || | |||| ||| || ||||| ||||| |
|
|
| T |
8017794 |
ttgttcttgttggcggttcaactagaattcccaaagttcagcaactgttgcaagatttcttcaatggtaaagagctttgcaagagtatcaacccagacga |
8017893 |
T |
|
| Q |
303 |
ggctgttgcttatggtgcagctgt |
326 |
Q |
| |
|
|||||||||||||||||| ||||| |
|
|
| T |
8017894 |
ggctgttgcttatggtgccgctgt |
8017917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 579
Target Start/End: Original strand, 8383577 - 8383630
Alignment:
| Q |
526 |
gtttatgagggtgagagaataaaagccagtgagaacaacttgttgggtttgttt |
579 |
Q |
| |
|
|||||||||||||||||| | ||||| | ||||||||||||||| ||||||||| |
|
|
| T |
8383577 |
gtttatgagggtgagagattgaaagctaatgagaacaacttgttaggtttgttt |
8383630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 292 - 336
Target Start/End: Original strand, 13333838 - 13333882
Alignment:
| Q |
292 |
aaccccgacgaggctgttgcttatggtgcagctgtgcaggctgct |
336 |
Q |
| |
|
||||| || |||||||||||||||||||||||||| ||||||||| |
|
|
| T |
13333838 |
aacccagatgaggctgttgcttatggtgcagctgttcaggctgct |
13333882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 526 - 573
Target Start/End: Complemental strand, 8601441 - 8601394
Alignment:
| Q |
526 |
gtttatgagggtgagagaataaaagccagtgagaacaacttgttgggt |
573 |
Q |
| |
|
|||||||| || |||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
8601441 |
gtttatgaaggcgagagattaaaagcaagtgagaacaacttgttgggt |
8601394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 237
Target Start/End: Complemental strand, 8601921 - 8601727
Alignment:
| Q |
43 |
acaattgacatagatgctatatgtcagggtattgacttctgctcatcaattactcgggcgaaatttgagcgactcaacatggacctctttgaaaaatgta |
142 |
Q |
| |
|
||||||||||||||| | ||| | |||||||||| ||| |||||||| |||||||| || ||||||| |||||| ||||||||||| | || |||| |
|
|
| T |
8601921 |
acaattgacatagattccttatttgagggtattgatttccattcatcaatcactcgggccaagtttgagcaactcaatgtggacctctttaagaagtgta |
8601822 |
T |
|
| Q |
143 |
aggagattgttcggagttgtctacgtgatgcttacatggaccagagtatggtacatgaaattgtccttgttggaggttcatctagaattcccaaa |
237 |
Q |
| |
|
|||| |||| |||||||| |||||||| | || || |||||| || |||| |||||||||||| ||||| ||||| ||||||||| |
|
|
| T |
8601821 |
tagagactgttgaaagttgtcttagtgatgctcagatcgaaaagagtagtgtggatgatgctgtccttgttggcggttcttctaggattcccaaa |
8601727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 324
Target Start/End: Complemental strand, 1301156 - 1301127
Alignment:
| Q |
295 |
cccgacgaggctgttgcttatggtgcagct |
324 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
1301156 |
cccgacgaggctgttgcttatggtgcagct |
1301127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 526 - 579
Target Start/End: Complemental strand, 8569778 - 8569725
Alignment:
| Q |
526 |
gtttatgagggtgagagaataaaagccagtgagaacaacttgttgggtttgttt |
579 |
Q |
| |
|
|||||||||||||||||| |||||| ||||| ||||||||| | ||||||||| |
|
|
| T |
8569778 |
gtttatgagggtgagagattaaaagatagtgacaacaacttgcttggtttgttt |
8569725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 532 - 597
Target Start/End: Complemental strand, 8581161 - 8581096
Alignment:
| Q |
532 |
gagggtgagagaataaaagccagtgagaacaacttgttgggtttgtttcgtctctctgctcctcct |
597 |
Q |
| |
|
||||||||||||| || ||| ||||| ||||||||| ||||||||||| | |||||| ||||||| |
|
|
| T |
8581161 |
gagggtgagagaacaagagcaagtgataacaacttgctgggtttgtttgatttctctgttcctcct |
8581096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 8616474 - 8616329
Alignment:
| Q |
197 |
atgaaattgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccc |
296 |
Q |
| |
|
|||| ||||| ||||| || || || ||||| ||||| ||| ||| | |||||||| ||||||||| | || | ||||||||||| || ||| || || |
|
|
| T |
8616474 |
atgatattgttcttgtcggtggctcgtctaggattcctaaagtgcaggaactattgagtgactttttcgatgggaaggatttgtgcaagaacatcaatcc |
8616375 |
T |
|
| Q |
297 |
cgacgaggctgttgcttatggtgcagctgtgcaggctgctttgttg |
342 |
Q |
| |
|
|| |||||||||||| ||| ||||| || ||||||||||||||| |
|
|
| T |
8616374 |
tgatgaggctgttgctagtggggcagcagttcaggctgctttgttg |
8616329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 462
Target Start/End: Complemental strand, 17259805 - 17259764
Alignment:
| Q |
421 |
gatgtcatgagtgtagtgattcctaagaacactccaattcct |
462 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||| |||||||| |
|
|
| T |
17259805 |
gatgtcatgagtgtggtgattcctaggaacacttcaattcct |
17259764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 421 - 462
Target Start/End: Complemental strand, 17267508 - 17267467
Alignment:
| Q |
421 |
gatgtcatgagtgtagtgattcctaagaacactccaattcct |
462 |
Q |
| |
|
|||||||||||||| |||||||||| ||||||| |||||||| |
|
|
| T |
17267508 |
gatgtcatgagtgtggtgattcctaggaacacttcaattcct |
17267467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 336
Target Start/End: Complemental strand, 39985356 - 39985300
Alignment:
| Q |
280 |
tgcatgagcataaaccccgacgaggctgttgcttatggtgcagctgtgcaggctgct |
336 |
Q |
| |
|
|||| ||||||||| || || ||||||||||| |||||||| ||||| ||||||||| |
|
|
| T |
39985356 |
tgcaagagcataaatcctgatgaggctgttgcatatggtgctgctgttcaggctgct |
39985300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 101; Significance: 9e-50; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 37 - 365
Target Start/End: Complemental strand, 12528457 - 12528129
Alignment:
| Q |
37 |
gaggccacaattgacatagatgctatatgtcagggtattgacttctgctcatcaattactcgggcgaaatttgagcgactcaacatggacctctttgaaa |
136 |
Q |
| |
|
||||| |||||||||||||||||||||||| |||| |||||||||||||||||||| ||||| || || || |||| ||| || |||||||||||||||| |
|
|
| T |
12528457 |
gaggctacaattgacatagatgctatatgtgagggcattgacttctgctcatcaatcactcgagccaagttcgagcaactgaatatggacctctttgaaa |
12528358 |
T |
|
| Q |
137 |
aatgtaaggagattgttcggagttgtctacgtgatgcttacatggaccagagtatggtacatgaaattgtccttgttggaggttcatctagaattcccaa |
236 |
Q |
| |
|
| |||| ||||| ||| |||||| | |||||| | |||||| |||||| ||| |||| ||||| |||||||| || || ||||| |||||||| |
|
|
| T |
12528357 |
agtgtatggagaccgttgaaagttgtttgaccgatgctaagatggacaagagtagtgtagatgatattgtacttgttggtggctcgtctaggattcccaa |
12528258 |
T |
|
| Q |
237 |
aatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacgaggctgttgcttatggtgcagctgtgcaggctgct |
336 |
Q |
| |
|
| || | | |||||||| || ||||||||||| | ||| || | || |||||| ||||| || |||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
12528257 |
agtgaagcagctattgcaggagtttttcaagggcaaggagttatacaagagcatcaaccctgatgaggctgttgcttatggtgccgctgttcaggctgct |
12528158 |
T |
|
| Q |
337 |
ttgttgattgatggcatcaagaatgttcc |
365 |
Q |
| |
|
||||||| ||| ||||| |||| |||||| |
|
|
| T |
12528157 |
ttgttgagtgaaggcatgaagactgttcc |
12528129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 273 - 368
Target Start/End: Complemental strand, 43744533 - 43744438
Alignment:
| Q |
273 |
ggatttgtgcatgagcataaaccccgacgaggctgttgcttatggtgcagctgtgcaggctgctttgttgattgatggcatcaagaatgttccaaa |
368 |
Q |
| |
|
||||||||| | || ||| ||||| || ||||| |||||| ||||||||||||||||||||||||||||| ||| ||| | || || |||||||| |
|
|
| T |
43744533 |
ggatttgtgtaagaacattaaccctgatgaggcagttgctattggtgcagctgtgcaggctgctttgttgagtgaaggctttaaaaaagttccaaa |
43744438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 71; Significance: 7e-32; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 203 - 453
Target Start/End: Complemental strand, 35132243 - 35131993
Alignment:
| Q |
203 |
ttgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacga |
302 |
Q |
| |
|
|||| ||||||||||| || ||||| ||||||||| ||| | | ||||||||| |||||||||| || | ||| ||||||| |||||| |||||||| || |
|
|
| T |
35132243 |
ttgttcttgttggagggtcttctaggattcccaaagtgcagcagctattgcaaaactttttcaaagggaaggagttgtgcaagagcattaaccccgatga |
35132144 |
T |
|
| Q |
303 |
ggctgttgcttatggtgcagctgtgcaggctgctttgttgattgatggcatcaagaatgttccaaatttggtcttgtgagatattacacccttgtcgctt |
402 |
Q |
| |
|
|||||| |||||||| ||||| || |||||||||||||||| | | ||||| || ||||||||||| ||||| || ||| ||||||| ||||| ||| |
|
|
| T |
35132143 |
ggctgtagcttatggggcagcagttcaggctgctttgttgagtaaaggcataaaaaatgttccaaagttggtgttacaggatgttacacctttgtctctt |
35132044 |
T |
|
| Q |
403 |
ggtatatggacaaaaggagatgtcatgagtgtagtgattcctaagaacact |
453 |
Q |
| |
|
|||| | | | ||||||| |||||| ||| |||||||||| ||||||| |
|
|
| T |
35132043 |
ggtaggtcaatagtaggagatatcatgaatgtggtgattcctaggaacact |
35131993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 197 - 407
Target Start/End: Complemental strand, 30775045 - 30774835
Alignment:
| Q |
197 |
atgaaattgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccc |
296 |
Q |
| |
|
|||| ||||| ||||| || ||||| ||||| ||||||||| ||| | ||||||||| | || ||||| || | ||||||||||| |||||| || || |
|
|
| T |
30775045 |
atgatattgttcttgtcggtggttcttctaggattcccaaagtgcaggaactattgcgtaatttcttcaatgggaaggatttgtgcaagagcatcaatcc |
30774946 |
T |
|
| Q |
297 |
cgacgaggctgttgcttatggtgcagctgtgcaggctgctttgttgattgatggcatcaagaatgttccaaatttggtcttgtgagatattacacccttg |
396 |
Q |
| |
|
|| ||||| |||||| | || |||||||| ||||||||| | |||| ||| ||||| ||||||| ||||| ||||| || ||||| | || || ||| |
|
|
| T |
30774945 |
tgatgaggcagttgctcacggggcagctgtccaggctgctctattgagtgaaggcattaagaatgccccaaagttggtgctgcgagatgtcacccctttg |
30774846 |
T |
|
| Q |
397 |
tcgcttggtat |
407 |
Q |
| |
|
|| |||||||| |
|
|
| T |
30774845 |
tcacttggtat |
30774835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 361
Target Start/End: Original strand, 9336314 - 9336430
Alignment:
| Q |
245 |
aactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacgaggctgttgcttatggtgcagctgtgcaggctgctttgttgat |
344 |
Q |
| |
|
||||||||| ||| ||||||||||| | ||| || | |||| | || ||||| || |||||||||||||||||||||||||| || |||||| | |||| |
|
|
| T |
9336314 |
aactattgctagaatttttcaaggggaaggaattattcatgggtatcaacccagatgaggctgttgcttatggtgcagctgttcaagctgctattttgag |
9336413 |
T |
|
| Q |
345 |
tgatggcatcaagaatg |
361 |
Q |
| |
|
||| ||| | ||||||| |
|
|
| T |
9336414 |
tgaaggctttaagaatg |
9336430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 66; Significance: 7e-29; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 197 - 374
Target Start/End: Complemental strand, 15594827 - 15594650
Alignment:
| Q |
197 |
atgaaattgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccc |
296 |
Q |
| |
|
|||| |||||| ||||||| || || ||||| ||||||||| ||| |||||||| | || |||||| |||| | ||| |||||||||||||| ||||| |
|
|
| T |
15594827 |
atgatattgtcattgttggtgggtcttctaggattcccaaagtgcaacaactattgaaggattttttcgagggaaaggaattgtgcatgagcatcaaccc |
15594728 |
T |
|
| Q |
297 |
cgacgaggctgttgcttatggtgcagctgtgcaggctgctttgttgattgatggcatcaagaatgttccaaatttggt |
374 |
Q |
| |
|
|| |||||||||||||||||||||||||| |||||||||||||||| ||| || | || ||||||||||| ||||| |
|
|
| T |
15594727 |
tgatgaggctgttgcttatggtgcagctgtccaggctgctttgttgagtgaaggttttaaaaatgttccaaacttggt |
15594650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 204 - 398
Target Start/End: Original strand, 34467170 - 34467364
Alignment:
| Q |
204 |
tgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacgag |
303 |
Q |
| |
|
||||||||| || || || ||||| ||||||||| ||| | | ||||||| ||||||||||| |||| |||| | |||| ||||| ||||| || ||| |
|
|
| T |
34467170 |
tgtccttgtcgggggctcttctaggattcccaaagtgcagcagctattgcgggactttttcaatggtaaggatctatgcaatagcatcaaccctgatgag |
34467269 |
T |
|
| Q |
304 |
gctgttgcttatggtgcagctgtgcaggctgctttgttgattgatggcatcaagaatgttccaaatttggtcttgtgagatattacacccttgtc |
398 |
Q |
| |
|
||||| ||||||| ||||||||||| ||||||||||||| | | ||| | || ||||||||||| ||||| || ||||| ||||||| ||||| |
|
|
| T |
34467270 |
gctgtcgcttatgtcgcagctgtgcaagctgctttgttgagtaaaggctttaacaatgttccaaacttggtgctgcgagatgttacaccattgtc |
34467364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 203 - 324
Target Start/End: Original strand, 4678938 - 4679059
Alignment:
| Q |
203 |
ttgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacga |
302 |
Q |
| |
|
|||| ||||| || |||||||| || ||||||||| ||| | | ||||||||||||||||| ||| | | ||||||||||| ||| || ||||| || || |
|
|
| T |
4678938 |
ttgttcttgtgggtggttcatcgaggattcccaaagtgcaggatctattgcaagacttttttaagcggaaggatttgtgcaagagtatcaacccagatga |
4679037 |
T |
|
| Q |
303 |
ggctgttgcttatggtgcagct |
324 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
4679038 |
ggctgttgcttatggtgcagct |
4679059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 301 - 374
Target Start/End: Original strand, 52549425 - 52549498
Alignment:
| Q |
301 |
gaggctgttgcttatggtgcagctgtgcaggctgctttgttgattgatggcatcaagaatgttccaaatttggt |
374 |
Q |
| |
|
|||| ||| |||||||| |||||||| |||||||| ||||||| ||| ||||| ||||||||||||| ||||| |
|
|
| T |
52549425 |
gaggttgtagcttatggcgcagctgttcaggctgcattgttgagtgaaggcattcagaatgttccaaagttggt |
52549498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 65; Significance: 3e-28; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 203 - 407
Target Start/End: Original strand, 16657898 - 16658102
Alignment:
| Q |
203 |
ttgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacga |
302 |
Q |
| |
|
|||| ||||| || || |||||||| ||||||||| ||| | | ||||||||||||||||||||||| | |||||| |||| || || ||||| || || |
|
|
| T |
16657898 |
ttgttcttgtgggtggctcatctaggattcccaaagtgcaggatctattgcaagactttttcaagggcaaggatttatgcaaaagtatcaacccggatga |
16657997 |
T |
|
| Q |
303 |
ggctgttgcttatggtgcagctgtgcaggctgctttgttgattgatggcatcaagaatgttccaaatttggtcttgtgagatattacacccttgtcgctt |
402 |
Q |
| |
|
||||||||||| ||||||||||| || |||||| | |||| ||| ||| | |||||||| ||| ||||||| ||| ||||| |||| || ||||||||| |
|
|
| T |
16657998 |
agctgttgcttacggtgcagctgttcaagctgctattttgagtgaaggctttaagaatgtcccagatttggtgttgagagatgttaccccattgtcgctt |
16658097 |
T |
|
| Q |
403 |
ggtat |
407 |
Q |
| |
|
||||| |
|
|
| T |
16658098 |
ggtat |
16658102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 286 - 445
Target Start/End: Complemental strand, 43625116 - 43624957
Alignment:
| Q |
286 |
agcataaaccccgacgaggctgttgcttatggtgcagctgtgcaggctgctttgttgattgatggcatcaagaatgttccaaatttggtcttgtgagata |
385 |
Q |
| |
|
||||||||||| || |||||||||||||||||||||||||| ||||||||| | |||| | | ||||| |||||||||||||| ||||| || ||||| |
|
|
| T |
43625116 |
agcataaaccctgatgaggctgttgcttatggtgcagctgtccaggctgctattttgagtaaaggcattaagaatgttccaaaattggtgctgcgagatg |
43625017 |
T |
|
| Q |
386 |
ttacacccttgtcgcttggtatatggacaaaaggagatgtcatgagtgtagtgattccta |
445 |
Q |
| |
|
|||| || ||||| |||||||| | | || |||| |||||||||||| |||||||||| |
|
|
| T |
43625016 |
ttacccctttgtcacttggtatcttaaacaagggaggtgtcatgagtgtggtgattccta |
43624957 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 247 - 453
Target Start/End: Original strand, 12245831 - 12246037
Alignment:
| Q |
247 |
ctattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacgaggctgttgcttatggtgcagctgtgcaggctgctttgttgattg |
346 |
Q |
| |
|
||||| || ||||||||||| || | ||| ||||||| |||||| ||||| |||||||||||||||||||| |||||||| || ||||||||||||| | |
|
|
| T |
12245831 |
ctattacaggactttttcaacgggaaggaattgtgcaagagcattaaccctgacgaggctgttgcttatggggcagctgttcaagctgctttgttgagta |
12245930 |
T |
|
| Q |
347 |
atggcatcaagaatgttccaaatttggtcttgtgagatattacacccttgtcgcttggtatatggacaaaaggagatgtcatgagtgtagtgattcctaa |
446 |
Q |
| |
|
| | | |||||||||||||||||||| ||| ||| |||| || ||||| |||||| | | || ||| |||||||||||||| |||||||| | |
|
|
| T |
12245931 |
aagatgttaagaatgttccaaatttggtgttgcaggatgttactcctttgtccattggtaggtcaataataggggatgtcatgagtgtggtgattccaag |
12246030 |
T |
|
| Q |
447 |
gaacact |
453 |
Q |
| |
|
||||||| |
|
|
| T |
12246031 |
gaacact |
12246037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 193 - 407
Target Start/End: Original strand, 16662363 - 16662577
Alignment:
| Q |
193 |
gtacatgaaattgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagggtatggatttgtgcatgagcataa |
292 |
Q |
| |
|
|||||||| ||||| ||||| || || || ||||| ||||| ||| ||| | || |||||| |||| ||||| || | ||| ||||||| |||||| | |
|
|
| T |
16662363 |
gtacatgatattgttcttgtcgggggctcgtctaggattccaaaagtgcaggaattattgcgtaacttcttcaatgggaaggagttgtgcaagagcatca |
16662462 |
T |
|
| Q |
293 |
accccgacgaggctgttgcttatggtgcagctgtgcaggctgctttgttgattgatggcatcaagaatgttccaaatttggtcttgtgagatattacacc |
392 |
Q |
| |
|
|||| || ||||||||||||||||| ||||||||||| |||||| |||||| ||| ||||| ||| |||||||||| ||||| || |||| |||| || |
|
|
| T |
16662463 |
accctgatgaggctgttgcttatggggcagctgtgcaagctgctgtgttgagtgaaggcattaaggatgttccaaacttggtgctgcgagacgttacccc |
16662562 |
T |
|
| Q |
393 |
cttgtcgcttggtat |
407 |
Q |
| |
|
||||| |||||||| |
|
|
| T |
16662563 |
attgtcacttggtat |
16662577 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 247 - 374
Target Start/End: Complemental strand, 11999151 - 11999024
Alignment:
| Q |
247 |
ctattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacgaggctgttgcttatggtgcagctgtgcaggctgctttgttgattg |
346 |
Q |
| |
|
||||| || ||||||||||| || | ||| ||||||| |||||| ||||| || |||||||| |||||||| |||||||| || ||||||||||||| || |
|
|
| T |
11999151 |
ctattacatgactttttcaacgggaaggagttgtgcaagagcattaaccctgatgaggctgtagcttatggggcagctgttcaagctgctttgttgagtg |
11999052 |
T |
|
| Q |
347 |
atggcatcaagaatgttccaaatttggt |
374 |
Q |
| |
|
| | | |||||||||||||||||||| |
|
|
| T |
11999051 |
aagatgttaagaatgttccaaatttggt |
11999024 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 146 - 374
Target Start/End: Complemental strand, 14703252 - 14703024
Alignment:
| Q |
146 |
agattgttcggagttgtctacgtgatgcttacatggaccagagtatggtacatgaaattgtccttgttggaggttcatctagaattcccaaaatgcggaa |
245 |
Q |
| |
|
|||||||| ||||||||| ||||||| | |||||| |||||| ||| |||| |||| ||||| || || || ||| | ||||||||| | | | | |
|
|
| T |
14703252 |
agattgttgagagttgtcttattgatgctaagatggacaagagtagagtagatgatgttgttcttgtcggtgggtcttctcggattcccaaagtacagca |
14703153 |
T |
|
| Q |
246 |
actattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacgaggctgttgcttatggtgcagctgtgcaggctgctttgttgatt |
345 |
Q |
| |
|
| |||| || ||||||||| |||| | ||| ||||||| ||||| ||||| || || ||||| |||||||| |||||||| |||||||||||||||| | |
|
|
| T |
14703152 |
attattacaggactttttccaggggaaggagttgtgcaacagcattaaccctgatgaagctgtagcttatggggcagctgttcaggctgctttgttgagt |
14703053 |
T |
|
| Q |
346 |
gatggcatcaagaatgttccaaatttggt |
374 |
Q |
| |
|
|| | | ||||||||||||| || ||||| |
|
|
| T |
14703052 |
gaagacgtcaagaatgttccgaagttggt |
14703024 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 146 - 331
Target Start/End: Complemental strand, 12234533 - 12234349
Alignment:
| Q |
146 |
agattgttcggagttgtctacgtgatgcttacatggaccagagtatggtacatgaaattgtccttgttggaggttcatctagaattcccaaaatgcggaa |
245 |
Q |
| |
|
|||||||| ||||||||| |||||||| | |||||| | |||| ||| ||||| |||||||| |||| || || ||||| ||||||||| ||| | | |
|
|
| T |
12234533 |
agattgttgagagttgtcttagtgatgctaagatggacaaaagtagggtggatgaagttgtccttattggcgggtcctctaggattcccaaagtgcagca |
12234434 |
T |
|
| Q |
246 |
actattgcaagactttttcaagggtatggatttgtgcatgagcataaaccccgacgaggctgttgcttatggtgcagctgtgcagg |
331 |
Q |
| |
|
||||||||| || ||||||||||| | ||| |||||| ||| || ||||| || ||||| |||||||||| |||||||| |||| |
|
|
| T |
12234433 |
actattgcaggattttttcaaggggaaggagctgtgcaagagtattaaccctga-gaggcggttgcttatgaggcagctgttcagg |
12234349 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 256 - 343
Target Start/End: Complemental strand, 7541960 - 7541873
Alignment:
| Q |
256 |
gactttttcaagggtatggatttgtgcatgagcataaaccccgacgaggctgttgcttatggtgcagctgtgcaggctgctttgttga |
343 |
Q |
| |
|
||||||||||| || | ||| ||||||| |||||| || || || ||||||||||||||||| |||||||| |||||||| ||||||| |
|
|
| T |
7541960 |
gactttttcaatggaaaggacttgtgcaagagcattaatcctgatgaggctgttgcttatggggcagctgttcaggctgcattgttga |
7541873 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 169 - 373
Target Start/End: Original strand, 12258928 - 12259132
Alignment:
| Q |
169 |
gatgcttacatggaccagagtatggtacatgaaattgtccttgttggaggttcatctagaattcccaaaatgcggaaactattgcaagactttttcaagg |
268 |
Q |
| |
|
|||||| ||| |||| |||||| ||| |||| |||||||||| || || || ||||| |||| |||| ||| | | ||||| || || |||||||||| |
|
|
| T |
12258928 |
gatgctaacacggacaagagtaatgtagatgatgttgtccttgtaggtgggtcttctaggattctcaaagtgcagcagctattacaggattttttcaagg |
12259027 |
T |
|
| Q |
269 |
gtatggatttgtgcatgagcataaaccccgacgaggctgttgcttatggtgcagctgtgcaggctgctttgttgattgatggcatcaagaatgttccaaa |
368 |
Q |
| |
|
| | || ||||||| |||||| || || || |||||||| |||| ||| || ||| | |||||||||||||| | ||| | ||| ||||||||||||| |
|
|
| T |
12259028 |
ggaaagagttgtgcaagagcattaatcctgatgaggctgtagcttttggggcggctattcaggctgctttgttaagtgaagatatccagaatgttccaaa |
12259127 |
T |
|
| Q |
369 |
tttgg |
373 |
Q |
| |
|
|||| |
|
|
| T |
12259128 |
gttgg |
12259132 |
T |
|
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Target: chr5 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 285 - 407
Target Start/End: Complemental strand, 28219623 - 28219501
Alignment:
| Q |
285 |
gagcataaaccccgacgaggctgttgcttatggtgcagctgtgcaggctgctttgttgattgatggcatcaagaatgttccaaatttggtcttgtgagat |
384 |
Q |
| |
|
|||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||| ||| ||| | || || ||||| || ||||| || |||| |
|
|
| T |
28219623 |
gagcattaaccctgatgaggctgttgcttatggtgcagctgtgcaggctgctttgttgagtgaaggctttaaaaaagttccgaagttggtgctgcaagat |
28219524 |
T |
|
| Q |
385 |
attacacccttgtcgcttggtat |
407 |
Q |
| |
|
||||||| ||||| |||||||| |
|
|
| T |
28219523 |
gttacacctttgtctcttggtat |
28219501 |
T |
|
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