View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3454_low_1 (Length: 355)

Name: NF3454_low_1
Description: NF3454
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3454_low_1
NF3454_low_1
[»] chr3 (9 HSPs)
chr3 (76-337)||(53981691-53981952)
chr3 (166-320)||(33909472-33909629)
chr3 (152-320)||(38300579-38300751)
chr3 (244-322)||(48407589-48407670)
chr3 (213-312)||(31563892-31563994)
chr3 (152-278)||(38300414-38300541)
chr3 (262-319)||(5847182-5847239)
chr3 (105-137)||(10758998-10759030)
chr3 (105-137)||(33909620-33909652)
[»] chr8 (12 HSPs)
chr8 (170-320)||(7621999-7622149)
chr8 (184-313)||(21505089-21505218)
chr8 (163-320)||(3537714-3537870)
chr8 (244-320)||(43984236-43984315)
chr8 (244-312)||(27402335-27402403)
chr8 (153-280)||(7622150-7622277)
chr8 (166-211)||(36994086-36994131)
chr8 (271-320)||(21653593-21653642)
chr8 (170-222)||(7621806-7621858)
chr8 (105-137)||(33435761-33435793)
chr8 (216-312)||(34248189-34248285)
chr8 (105-137)||(36039784-36039816)
[»] chr1 (12 HSPs)
chr1 (153-318)||(19481523-19481691)
chr1 (171-310)||(35892376-35892514)
chr1 (152-227)||(14368888-14368963)
chr1 (166-222)||(35024598-35024654)
chr1 (152-227)||(19481218-19481293)
chr1 (244-322)||(40367689-40367770)
chr1 (152-222)||(482586-482655)
chr1 (242-314)||(35891839-35891910)
chr1 (274-312)||(13356869-13356907)
chr1 (286-320)||(19614116-19614150)
chr1 (177-259)||(38739764-38739848)
chr1 (105-137)||(17419869-17419901)
[»] chr4 (8 HSPs)
chr4 (242-320)||(27048329-27048407)
chr4 (213-313)||(34206147-34206247)
chr4 (152-206)||(34206119-34206173)
chr4 (214-278)||(21497938-21498002)
chr4 (105-137)||(991286-991318)
chr4 (105-137)||(8559961-8559993)
chr4 (105-137)||(10390465-10390497)
chr4 (105-137)||(21646794-21646826)
[»] chr2 (8 HSPs)
chr2 (242-320)||(29923403-29923481)
chr2 (176-313)||(901670-901810)
chr2 (242-313)||(30160137-30160211)
chr2 (152-222)||(10429680-10429748)
chr2 (283-320)||(3185965-3186002)
chr2 (105-137)||(5424772-5424804)
chr2 (105-137)||(6183356-6183388)
chr2 (105-137)||(22447182-22447214)
[»] chr7 (10 HSPs)
chr7 (198-313)||(13788746-13788861)
chr7 (166-320)||(12524940-12525093)
chr7 (240-320)||(43288369-43288449)
chr7 (242-320)||(12524642-12524720)
chr7 (241-310)||(23839002-23839071)
chr7 (152-222)||(14690980-14691050)
chr7 (294-323)||(21557118-21557147)
chr7 (105-137)||(8585173-8585205)
chr7 (105-137)||(12578450-12578482)
chr7 (105-137)||(23396896-23396928)
[»] chr5 (3 HSPs)
chr5 (240-320)||(4465104-4465184)
chr5 (105-137)||(24125144-24125176)
chr5 (105-137)||(27760457-27760489)
[»] chr6 (5 HSPs)
chr6 (242-320)||(5557187-5557265)
chr6 (105-137)||(15102614-15102646)
chr6 (105-137)||(16590266-16590298)
chr6 (105-137)||(16605082-16605114)
chr6 (105-137)||(17096688-17096720)


Alignment Details
Target: chr3 (Bit Score: 234; Significance: 1e-129; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 76 - 337
Target Start/End: Complemental strand, 53981952 - 53981691
Alignment:
Q  76 tgttggtttaaatattagaattgaatatcgttgaaatttggggtctaactcatcctaacaaatccaccctctcaaagcaactaagagcatatcgcaataa 175  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||    
T  53981952 tgttggtttaaatattagaattgaatatcgttgaaatttggggtctaactcatccttacaaatccaccctctcaaagaaactaggagcatatcgcaataa 53981853  T
Q  176 aggtgggattaccgacacacaccctcacgcttggggagggatttccatcacactccctcgcacacggacccaatgggcatgaagtgtggcattgcggaat 275  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53981852 aggtgggattaccgacacacaccctcacgctcggggagggatttccatcacactccctcgcacacggacccaatgggcatgaagtgtggcattgcggaat 53981753  T
Q  276 cccaatggtggatcttggataggctctgataccatgttaaaattttgttggggaatccgggg 337  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  53981752 cccaatggtggaccttggataggctctgatacgatgttaaaattttgttggggagtccgggg 53981691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 166 - 320
Target Start/End: Original strand, 33909472 - 33909629
Alignment:
Q  166 atcgcaataaaggtgggattaccgacacacaccctcacgcttggggagggatttccatcacactccctcgcacacggacccaatgggcatgaagtgtggc 265  Q
    ||||||||||||||||||||||| |||||  ||||||| |||||||  ||||||||| ||||||||||||||| | || |||| |||||||||| |||||    
T  33909472 atcgcaataaaggtgggattaccaacacatcccctcacacttgggggaggatttccaacacactccctcgcactcagatccaacgggcatgaagcgtggc 33909571  T
Q  266 attgcggaatcc---caatggtggatcttggataggctctgataccatgttaaaattt 320  Q
    | ||||||||||   ||| ||||||||||||||||| |||||||||||||| ||||||    
T  33909572 aatgcggaatcccgacaacggtggatcttggataggatctgataccatgttgaaattt 33909629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 152 - 320
Target Start/End: Original strand, 38300579 - 38300751
Alignment:
Q  152 gcaactaagagcatatcgcaataaaggtgggattaccga-cacacaccctcacgcttggggagggatttccatcacactccctcgcacacggacccaatg 250  Q
    ||||||| | ||| |||||||| |||||||  ||||| | ||||| |||||||  | |||| | |||||||| ||||| ||||| ||| | |||| ||||    
T  38300579 gcaactaggggcagatcgcaattaaggtggtcttaccaaacacaccccctcactttcggggcgagatttccaacacacaccctcacactcagacctaatg 38300678  T
Q  251 ggcatgaagtgtggcattgcggaatcc---caatggtggatcttggataggctctgataccatgttaaaattt 320  Q
    |||||| || |||||| ||||||||||   ||| ||| |||| ||||||||||||||||||||||| ||||||    
T  38300679 ggcatgtagcgtggcaatgcggaatcccgacaacggtagatcctggataggctctgataccatgttgaaattt 38300751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 322
Target Start/End: Complemental strand, 48407670 - 48407589
Alignment:
Q  244 cccaatgggcatgaagtgtggcattgcggaatccc---aatggtggatcttggataggctctgataccatgttaaaattttg 322  Q
    |||||||||||||||| |||||| |||||||||||   || ||| |||| ||||||||||||||||||||||| ||||||||    
T  48407670 cccaatgggcatgaagcgtggcaatgcggaatcccgacaacggtagatcctggataggctctgataccatgttgaaattttg 48407589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 213 - 312
Target Start/End: Original strand, 31563892 - 31563994
Alignment:
Q  213 gggatttccatcacactccctcgcacacggacccaatgggcatgaagtgtggcattgcggaatccc---aatggtggatcttggataggctctgatacca 309  Q
    |||||||||| ||||| |||||   | | |||||||||| |||| || |||||| |||||||||||   || ||| ||||||||||||||||||||||||    
T  31563892 gggatttccaacacaccccctcatgctcagacccaatggacatgtagcgtggcaatgcggaatcccgacaacggtagatcttggataggctctgatacca 31563991  T
Q  310 tgt 312  Q
    |||    
T  31563992 tgt 31563994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 152 - 278
Target Start/End: Original strand, 38300414 - 38300541
Alignment:
Q  152 gcaactaagagcatatcgcaataaaggtgggattaccga-cacacaccctcacgcttggggagggatttccatcacactccctcgcacacggacccaatg 250  Q
    ||||||||| ||| |||||||| |||||||  ||||| | ||||| |||||||  | |||| | |||||||| ||||| ||||| | | | |||| ||||    
T  38300414 gcaactaagggcagatcgcaattaaggtggtcttaccaaacacaccccctcactttcggggcgagatttccaacacaccccctcacgctcagacctaatg 38300513  T
Q  251 ggcatgaagtgtggcattgcggaatccc 278  Q
    |||||| || |||||| |||||||||||    
T  38300514 ggcatgtagcgtggcaatgcggaatccc 38300541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 262 - 319
Target Start/End: Complemental strand, 5847239 - 5847182
Alignment:
Q  262 tggcattgcggaatcccaatggtggatcttggataggctctgataccatgttaaaatt 319  Q
    ||||| ||| ||||||||| |||  ||||||| |||||||||||||| ||||||||||    
T  5847239 tggcaatgcagaatcccaacggtatatcttgggtaggctctgataccgtgttaaaatt 5847182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 137
Target Start/End: Original strand, 10758998 - 10759030
Alignment:
Q  105 gttgaaatttggggtctaactcatcctaacaaa 137  Q
    ||||||||||||||||||||||||||| |||||    
T  10758998 gttgaaatttggggtctaactcatccttacaaa 10759030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 137
Target Start/End: Original strand, 33909620 - 33909652
Alignment:
Q  105 gttgaaatttggggtctaactcatcctaacaaa 137  Q
    ||||||||||||||||||||||||||| |||||    
T  33909620 gttgaaatttggggtctaactcatccttacaaa 33909652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 1e-41; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 170 - 320
Target Start/End: Complemental strand, 7622149 - 7621999
Alignment:
Q  170 caataaaggtgggattaccgacacacaccctcacgcttggggagggatttccatcacactccctcgcacacggacccaatgggcatgaagtgtggcattg 269  Q
    |||| |||||||||||||| |||||| |||||||| |||||| |||||||||| ||||| ||||| ||| |  ||||||||||||||||| |||||| ||    
T  7622149 caatgaaggtgggattaccaacacaccccctcacgtttggggcgggatttccaacacaccccctcacactcttacccaatgggcatgaagcgtggcaatg 7622050  T
Q  270 cggaatcccaatggtggatcttggataggctctgataccatgttaaaattt 320  Q
    ||||||||||| ||| |||||||||||||||||||||||||||| ||||||    
T  7622049 cggaatcccaagggtagatcttggataggctctgataccatgttgaaattt 7621999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 184 - 313
Target Start/End: Original strand, 21505089 - 21505218
Alignment:
Q  184 ttaccgacacacaccctcacgcttggggagggatttccatcacactccctcgcacacggacccaatgggcatgaagtgtggcattgcggaatcccaatgg 283  Q
    ||||| |||||| |||| ||||| |||| ||||||||||  |||| ||||| | | ||||||||||||||||||||||||||| ||| |||||| ||  |    
T  21505089 ttaccaacacaccccctaacgctcggggcgggatttccaaaacaccccctcacgctcggacccaatgggcatgaagtgtggcaatgctgaatccgaacag 21505188  T
Q  284 tggatcttggataggctctgataccatgtt 313  Q
    ||||||||| ||||||||||||||||||||    
T  21505189 tggatcttgaataggctctgataccatgtt 21505218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 320
Target Start/End: Complemental strand, 3537870 - 3537714
Alignment:
Q  163 catatcgcaataaaggtgggattaccgacacacaccctcacgcttggggagggatttccatcacactccctcgcacacggacccaatgggcatgaagtgt 262  Q
    |||||| |||| ||| |||||||||| ||||| ||||||| |||| ||| | |||||||| ||||| |||||   |   |||||||||||||||||| ||    
T  3537870 catatcacaattaagatgggattaccaacaca-accctcatgcttagggcgagatttccaacacacaccctcatgctaagacccaatgggcatgaagcgt 3537772  T
Q  263 ggcattgcggaatcccaatggtggatcttggataggctctgataccatgttaaaattt 320  Q
    |||| | ||||||  ||| ||| |||||  ||||||||||||||| | ||| ||||||    
T  3537771 ggcagtacggaatttcaacggtagatctcagataggctctgatactacgttgaaattt 3537714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 320
Target Start/End: Original strand, 43984236 - 43984315
Alignment:
Q  244 cccaatgggcatgaagtgtggcattgcggaatccc---aatggtggatcttggataggctctgataccatgttaaaattt 320  Q
    |||||||||||||||| |||||| |||||||||||   || | | |||| ||||||||||||||||||||||| ||||||    
T  43984236 cccaatgggcatgaagcgtggcaatgcggaatcccgacaacgttagatcctggataggctctgataccatgttgaaattt 43984315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 244 - 312
Target Start/End: Original strand, 27402335 - 27402403
Alignment:
Q  244 cccaatgggcatgaagtgtggcattgcggaatcccaatggtggatcttggataggctctgataccatgt 312  Q
    ||||||||||  |||| |||||| ||||||||||||| ||| |||||||||||||||||  ||||||||    
T  27402335 cccaatgggccagaagcgtggcaatgcggaatcccaacggtagatcttggataggctctagtaccatgt 27402403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 153 - 280
Target Start/End: Complemental strand, 7622277 - 7622150
Alignment:
Q  153 caactaagagcatatcgcaataaaggtgggattaccgacacacaccctcacgcttggggagggatttccatcacactccctcgcacacggacccaatggg 252  Q
    |||||||| | ||||| |||| |||||||||||||| || ||| |||||||| | |||| |||||||||| |||||  |||| ||| |   |||||||||    
T  7622277 caactaagggaatatcacaatgaaggtgggattaccaacgcaccccctcacgttcggggcgggatttccaacacacctcctcacactctagcccaatggg 7622178  T
Q  253 catgaagtgtggcattgcggaatcccaa 280  Q
    |||||||  ||||| ||| | |||||||    
T  7622177 catgaagcatggcaatgcaggatcccaa 7622150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 36994086 - 36994131
Alignment:
Q  166 atcgcaataaaggtgggattaccgacacacaccctcacgcttgggg 211  Q
    ||||||| |||||||||||||||||||||| |||||||||| ||||    
T  36994086 atcgcaacaaaggtgggattaccgacacaccccctcacgctcgggg 36994131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 271 - 320
Target Start/End: Complemental strand, 21653642 - 21653593
Alignment:
Q  271 ggaatcccaatggtggatcttggataggctctgataccatgttaaaattt 320  Q
    |||| ||||||| | ||||| |||||||||||||||||||||| ||||||    
T  21653642 ggaagcccaatgatagatctaggataggctctgataccatgttgaaattt 21653593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 7621858 - 7621806
Alignment:
Q  170 caataaaggtgggattaccgacacacaccctcacgcttggggagggatttcca 222  Q
    |||| |||||||||||||| || ||| ||||||||||||||| ||| ||||||    
T  7621858 caattaaggtgggattaccaacgcaccccctcacgcttggggcgggttttcca 7621806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 137
Target Start/End: Complemental strand, 33435793 - 33435761
Alignment:
Q  105 gttgaaatttggggtctaactcatcctaacaaa 137  Q
    ||||||||||||||||||||||||||| |||||    
T  33435793 gttgaaatttggggtctaactcatccttacaaa 33435761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 216 - 312
Target Start/End: Complemental strand, 34248285 - 34248189
Alignment:
Q  216 atttccatcacactccctcgcacacggacccaatgggcatgaagtgtggcattgcggaatcccaatggtggatcttggataggctctgataccatgt 312  Q
    ||||||| ||||| ||||| |||  || | ||||||||  |||| |||||| ||| |||||| ||  || ||||||||||||||| |||||||||||    
T  34248285 atttccaacacaccccctcacacttgggctcaatgggccagaagcgtggcaatgcagaatccaaacagtagatcttggataggctatgataccatgt 34248189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 137
Target Start/End: Original strand, 36039784 - 36039816
Alignment:
Q  105 gttgaaatttggggtctaactcatcctaacaaa 137  Q
    ||||||||||||||||||||||||||| |||||    
T  36039784 gttgaaatttggggtctaactcatccttacaaa 36039816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 153 - 318
Target Start/End: Original strand, 19481523 - 19481691
Alignment:
Q  153 caactaagagcatatcgcaataaaggtgggattaccgacacacaccctcacgcttggggagggatttccatcacactccctcgcacacggacccaatggg 252  Q
    |||||| | ||| |||||||| |||||| ||||||| ||||||||||||||||| ||||  || |||||| ||||| ||||| | | | |||||||||||    
T  19481523 caactaggggcagatcgcaattaaggtgagattaccaacacacaccctcacgctcggggcagggtttccaacacaccccctcacgctcagacccaatggg 19481622  T
Q  253 catgaagtgtggcattgcggaatccc---aatggtggatcttggataggctctgataccatgttaaaat 318  Q
    |||| || |||||| |||||||||||   |||||| |||||||||||||||||| ||||||||| ||||    
T  19481623 catggagcgtggcaatgcggaatcccgaaaatggtagatcttggataggctctggtaccatgttgaaat 19481691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 171 - 310
Target Start/End: Complemental strand, 35892514 - 35892376
Alignment:
Q  171 aataaaggtgggattaccgacacacaccctcacgcttggggagggatttccatcacactccctcgcacacggacccaatgggcatgaagtgtggcattgc 270  Q
    |||||| || |||||||| |||||| | |||||||| |||| |||||||||| ||||   |||| | | ||| ||||||||||||||||||||||| |||    
T  35892514 aataaatgtaggattaccaacacaccctctcacgctcggggcgggatttccaacacaactcctcacgctcgg-cccaatgggcatgaagtgtggcaatgc 35892416  T
Q  271 ggaatcccaatggtggatcttggataggctctgataccat 310  Q
    ||||||||||  || |||||||||||| ||||||||||||    
T  35892415 ggaatcccaacagtagatcttggatagactctgataccat 35892376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 227
Target Start/End: Original strand, 14368888 - 14368963
Alignment:
Q  152 gcaactaagagcatatcgcaataaaggtgggattaccgacacacaccctcacgcttggggagggatttccatcaca 227  Q
    |||||| |||||| |||||||| |||||||||||||| |||||| ||||||| |||||||||||||||||| ||||    
T  14368888 gcaactgagagcagatcgcaattaaggtgggattaccaacacaccccctcactcttggggagggatttccaacaca 14368963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 222
Target Start/End: Original strand, 35024598 - 35024654
Alignment:
Q  166 atcgcaataaaggtgggattaccgacacacaccctcacgcttggggagggatttcca 222  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||    
T  35024598 atcgcaataaaggtgggattaccaacacaccccctcacgcttggggtgggatttcca 35024654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 227
Target Start/End: Complemental strand, 19481293 - 19481218
Alignment:
Q  152 gcaactaagagcatatcgcaataaaggtgggattaccgacacacaccctcacgcttggggagggatttccatcaca 227  Q
    ||||||| | ||| |||||||| |||||||||||||| |||||| ||||||| || |||| |||||||||| ||||    
T  19481293 gcaactaggggcagatcgcaattaaggtgggattaccaacacaccccctcacactcggggcgggatttccaacaca 19481218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 322
Target Start/End: Complemental strand, 40367770 - 40367689
Alignment:
Q  244 cccaatgggcatgaagtgtggcattgcggaatcc---caatggtggatcttggataggctctgataccatgttaaaattttg 322  Q
    |||||| ||||||||| |||||| ||||||||||   ||| ||| |||| ||||||||||| ||||||||||| ||||||||    
T  40367770 cccaatcggcatgaagcgtggcaatgcggaatcctgacaacggtagatcctggataggctcagataccatgttgaaattttg 40367689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 222
Target Start/End: Complemental strand, 482655 - 482586
Alignment:
Q  152 gcaactaagagcatatcgcaataaaggtgggattaccgacacacaccctcacgcttggggagggatttcca 222  Q
    ||||||| | ||| |||||||| |||||||||||||| |||||| |||||||||| |||| ||||||||||    
T  482655 gcaactaggggcagatcgcaatcaaggtgggattacc-acacaccccctcacgctcggggcgggatttcca 482586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 314
Target Start/End: Complemental strand, 35891910 - 35891839
Alignment:
Q  242 gacccaatgggcatgaagtgtggcattgcggaatcccaatggtggatcttggataggctctgataccatgtta 314  Q
    |||| ||||||||||||| |||||| ||  |||||  |||||| ||||||||||| |||||||||||||||||    
T  35891910 gaccaaatgggcatgaagcgtggcaatgaagaatct-aatggtagatcttggataagctctgataccatgtta 35891839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 312
Target Start/End: Original strand, 13356869 - 13356907
Alignment:
Q  274 atcccaatggtggatcttggataggctctgataccatgt 312  Q
    ||||||| |||| ||||||||||||||||||||||||||    
T  13356869 atcccaacggtgtatcttggataggctctgataccatgt 13356907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 286 - 320
Target Start/End: Complemental strand, 19614150 - 19614116
Alignment:
Q  286 gatcttggataggctctgataccatgttaaaattt 320  Q
    ||||| |||||||||||||||||||||||||||||    
T  19614150 gatctaggataggctctgataccatgttaaaattt 19614116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 259
Target Start/End: Complemental strand, 38739848 - 38739764
Alignment:
Q  177 ggtgggattaccgacacacaccctcacgct--tggggagggatttccatcacactccctcgcacacggacccaatgggcatgaag 259  Q
    |||||||||||| |||||| ||||||||||   |||| ||||||||||  |||| ||||| | | | ||||||||||||||||||    
T  38739848 ggtgggattaccaacacaccccctcacgctcggggggtgggatttccaatacaccccctcacgctcagacccaatgggcatgaag 38739764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 137
Target Start/End: Complemental strand, 17419901 - 17419869
Alignment:
Q  105 gttgaaatttggggtctaactcatcctaacaaa 137  Q
    ||||||||||||||||||||||||||| |||||    
T  17419901 gttgaaatttggggtctaactcatccttacaaa 17419869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 6e-25; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 242 - 320
Target Start/End: Original strand, 27048329 - 27048407
Alignment:
Q  242 gacccaatgggcatgaagtgtggcattgcggaatcccaatggtggatcttggataggctctgataccatgttaaaattt 320  Q
    ||||||||||||||||||||||||| |||||||||| || ||| |||||||||||||||||||||||||||| ||||||    
T  27048329 gacccaatgggcatgaagtgtggcaatgcggaatcctaacggtagatcttggataggctctgataccatgttgaaattt 27048407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 313
Target Start/End: Original strand, 34206147 - 34206247
Alignment:
Q  213 gggatttccatcacactccctcgcacacggacccaatgggcatgaagtgtggcattgcggaatcccaatggtggatcttggataggctctgataccatgt 312  Q
    |||||| ||| ||||| ||||| | | ||||||||| |||||||||   ||||| ||||||||||||| | | |||||||||||||||||||||||||||    
T  34206147 gggattaccaacacaccccctcacgctcggacccaacgggcatgaaccctggcaatgcggaatcccaacgatagatcttggataggctctgataccatgt 34206246  T
Q  313 t 313  Q
    |    
T  34206247 t 34206247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 206
Target Start/End: Original strand, 34206119 - 34206173
Alignment:
Q  152 gcaactaagagcatatcgcaataaaggtgggattaccgacacacaccctcacgct 206  Q
    ||||||| | ||| ||||||||||||||||||||||| |||||| ||||||||||    
T  34206119 gcaactaggggcagatcgcaataaaggtgggattaccaacacaccccctcacgct 34206173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 278
Target Start/End: Original strand, 21497938 - 21498002
Alignment:
Q  214 ggatttccatcacactccctcgcacacggacccaatgggcatgaagtgtggcattgcggaatccc 278  Q
    ||||||||| ||||| ||||| | | ||| |||||||||||||||| |||||| |||||||||||    
T  21497938 ggatttccaacacaccccctcacgctcgggcccaatgggcatgaagcgtggcaatgcggaatccc 21498002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 137
Target Start/End: Complemental strand, 991318 - 991286
Alignment:
Q  105 gttgaaatttggggtctaactcatcctaacaaa 137  Q
    ||||||||||||||||||||||||||| |||||    
T  991318 gttgaaatttggggtctaactcatccttacaaa 991286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 137
Target Start/End: Original strand, 8559961 - 8559993
Alignment:
Q  105 gttgaaatttggggtctaactcatcctaacaaa 137  Q
    ||||||||||||||||||||||||||| |||||    
T  8559961 gttgaaatttggggtctaactcatccttacaaa 8559993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 137
Target Start/End: Original strand, 10390465 - 10390497
Alignment:
Q  105 gttgaaatttggggtctaactcatcctaacaaa 137  Q
    ||||||||||||||||||||||||||| |||||    
T  10390465 gttgaaatttggggtctaactcatccttacaaa 10390497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 137
Target Start/End: Original strand, 21646794 - 21646826
Alignment:
Q  105 gttgaaatttggggtctaactcatcctaacaaa 137  Q
    ||||||||||||||||||||||||||| |||||    
T  21646794 gttgaaatttggggtctaactcatccttacaaa 21646826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 242 - 320
Target Start/End: Complemental strand, 29923481 - 29923403
Alignment:
Q  242 gacccaatgggcatgaagtgtggcattgcggaatcccaatggtggatcttggataggctctgataccatgttaaaattt 320  Q
    |||||||||||| |||||||||||| ||||||||||| | ||| |||||||||||||||||||||||||||| ||||||    
T  29923481 gacccaatgggcctgaagtgtggcaatgcggaatcccgacggtagatcttggataggctctgataccatgttgaaattt 29923403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 176 - 313
Target Start/End: Complemental strand, 901810 - 901670
Alignment:
Q  176 aggtgggattaccgacacacaccctcacgcttggggagggatttccatcacactccctcgcacacggacccaatgggcatgaagtgtggcattgcggaat 275  Q
    |||||| |||||| || ||| |||||||| |||||| |||||||||| ||||| ||||| | | | | ||| |||||||||||| |||||| ||||||||    
T  901810 aggtggaattaccaacccaccccctcacgtttggggcgggatttccaacacaccccctcacgctcaggcccgatgggcatgaagcgtggcaatgcggaat 901711  T
Q  276 cc---caatggtggatcttggataggctctgataccatgtt 313  Q
    ||   ||| ||| |||| |||||||||||||||||||||||    
T  901710 cccaacaacggtagatcctggataggctctgataccatgtt 901670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 242 - 313
Target Start/End: Complemental strand, 30160211 - 30160137
Alignment:
Q  242 gacccaatgggcatgaagtgtggcattgcggaatcc---caatggtggatcttggataggctctgataccatgtt 313  Q
    |||||||||||||||||| |||||| ||||||||||   ||| ||| ||||||||||||||||||||||||||||    
T  30160211 gacccaatgggcatgaagcgtggcaatgcggaatcccgacaacggtagatcttggataggctctgataccatgtt 30160137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 152 - 222
Target Start/End: Complemental strand, 10429748 - 10429680
Alignment:
Q  152 gcaactaagagcatatcgcaataaaggtgggattaccgacacacaccctcacgcttggggagggatttcca 222  Q
    ||||||| | ||| |||||||| |||||||||||||| ||||||||||||||||  |||| ||||||||||    
T  10429748 gcaactaggggcagatcgcaattaaggtgggattaccaacacacaccctcacgc--ggggtgggatttcca 10429680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 283 - 320
Target Start/End: Complemental strand, 3186002 - 3185965
Alignment:
Q  283 gtggatcttggataggctctgataccatgttaaaattt 320  Q
    |||||| ||||||||||||||||||||| |||||||||    
T  3186002 gtggattttggataggctctgataccatcttaaaattt 3185965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 137
Target Start/End: Original strand, 5424772 - 5424804
Alignment:
Q  105 gttgaaatttggggtctaactcatcctaacaaa 137  Q
    ||||||||||||||||||||||||||| |||||    
T  5424772 gttgaaatttggggtctaactcatccttacaaa 5424804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 137
Target Start/End: Original strand, 6183356 - 6183388
Alignment:
Q  105 gttgaaatttggggtctaactcatcctaacaaa 137  Q
    ||||||||||||||||||||||||||| |||||    
T  6183356 gttgaaatttggggtctaactcatccttacaaa 6183388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 137
Target Start/End: Complemental strand, 22447214 - 22447182
Alignment:
Q  105 gttgaaatttggggtctaactcatcctaacaaa 137  Q
    ||||||||||||||||||||||||||| |||||    
T  22447214 gttgaaatttggggtctaactcatccttacaaa 22447182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 9e-21; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 198 - 313
Target Start/End: Original strand, 13788746 - 13788861
Alignment:
Q  198 cctcacgcttggggagggatttccatcacactccctcgcacacggacccaatgggcatgaagtgtggcattgcggaatcccaatggtggatcttggatag 297  Q
    ||||| ||| |||| |||||||||| ||||| ||||| | | | |||||||||||||||||| || ||| ||||||||| ||| ||| ||||||||||||    
T  13788746 cctcatgctcggggcgggatttccaacacacaccctcacgctcagacccaatgggcatgaagcgtcgcaatgcggaatcgcaacggtagatcttggatag 13788845  T
Q  298 gctctgataccatgtt 313  Q
    ||||| ||||||||||    
T  13788846 gctctaataccatgtt 13788861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 166 - 320
Target Start/End: Complemental strand, 12525093 - 12524940
Alignment:
Q  166 atcgcaataaaggtgggattaccgacacacaccctcacgcttggggagggatttccatcacactccctcgcacacggacccaatgggcatgaagtgtggc 265  Q
    |||||||| |||||||||||||   ||||| |||| ||||| |||| | |||||| | ||||| ||| | | | | |||||||||| |||||||||||||    
T  12525093 atcgcaattaaggtgggattactagcacacccccttacgctcggggcgagatttctaacacaccccc-cacgctcagacccaatggacatgaagtgtggc 12524995  T
Q  266 attgcggaatcccaatggtggatcttggataggctctgataccatgttaaaattt 320  Q
    | ||||||||||||| ||| ||||||| |||| || |||||||||||| ||||||    
T  12524994 aatgcggaatcccaacggtagatcttgtatagactatgataccatgttgaaattt 12524940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 240 - 320
Target Start/End: Complemental strand, 43288449 - 43288369
Alignment:
Q  240 cggacccaatgggcatgaagtgtggcattgcggaatcccaatggtggatcttggataggctctgataccatgttaaaattt 320  Q
    |||||||||||||||||||| |  ||| ||||||||||||| ||| |||||||||| ||||||||| ||||||| ||||||    
T  43288449 cggacccaatgggcatgaagcgcagcaatgcggaatcccaacggtagatcttggatgggctctgatgccatgttcaaattt 43288369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 242 - 320
Target Start/End: Complemental strand, 12524720 - 12524642
Alignment:
Q  242 gacccaatgggcatgaagtgtggcattgcggaatcccaatggtggatcttggataggctctgataccatgttaaaattt 320  Q
    ||||||||||| |||||| |||| | || |||||||||| ||| |||| ||||||| ||||||||||||||| ||||||    
T  12524720 gacccaatgggaatgaagcgtggaaatgtggaatcccaacggtagatcatggatagtctctgataccatgttgaaattt 12524642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 310
Target Start/End: Original strand, 23839002 - 23839071
Alignment:
Q  241 ggacccaatgggcatgaagtgtggcattgcggaatcccaatggtggatcttggataggctctgataccat 310  Q
    ||||||||| ||| |||||  ||||| || |||||||||||||| | |||||||||||||||||||||||    
T  23839002 ggacccaataggcctgaagcatggcaatgtggaatcccaatggtaggtcttggataggctctgataccat 23839071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 222
Target Start/End: Complemental strand, 14691050 - 14690980
Alignment:
Q  152 gcaactaagagcatatcgcaataaaggtgggattaccgacacacaccctcacgcttggggagggatttcca 222  Q
    ||||||| | ||| |||||||| ||||| |||||||| |||||| |||||| ||| |||||||||||||||    
T  14691050 gcaactaggggcagatcgcaattaaggtaggattaccaacacaccccctcatgctcggggagggatttcca 14690980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 323
Target Start/End: Complemental strand, 21557147 - 21557118
Alignment:
Q  294 ataggctctgataccatgttaaaattttgt 323  Q
    ||||||||||||||||||||||||||||||    
T  21557147 ataggctctgataccatgttaaaattttgt 21557118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 137
Target Start/End: Complemental strand, 8585205 - 8585173
Alignment:
Q  105 gttgaaatttggggtctaactcatcctaacaaa 137  Q
    ||||||||||||||||||||||||||| |||||    
T  8585205 gttgaaatttggggtctaactcatccttacaaa 8585173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 137
Target Start/End: Original strand, 12578450 - 12578482
Alignment:
Q  105 gttgaaatttggggtctaactcatcctaacaaa 137  Q
    ||||||||||||||||||||||||||| |||||    
T  12578450 gttgaaatttggggtctaactcatccttacaaa 12578482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 137
Target Start/End: Complemental strand, 23396928 - 23396896
Alignment:
Q  105 gttgaaatttggggtctaactcatcctaacaaa 137  Q
    ||||||||||||||||||||||||||| |||||    
T  23396928 gttgaaatttggggtctaactcatccttacaaa 23396896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 240 - 320
Target Start/End: Original strand, 4465104 - 4465184
Alignment:
Q  240 cggacccaatgggcatgaagtgtggcattgcggaatcccaatggtggatcttggataggctctgataccatgttaaaattt 320  Q
    ||||||||||||||| |||| |||||  ||||||||||||| |||  ||||||||||| ||||||||||||||| ||||||    
T  4465104 cggacccaatgggcacgaagcgtggcgatgcggaatcccaacggtaaatcttggatagactctgataccatgttgaaattt 4465184  T

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Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 137
Target Start/End: Complemental strand, 24125176 - 24125144
Alignment:
Q  105 gttgaaatttggggtctaactcatcctaacaaa 137  Q
    ||||||||||||||||||||||||||| |||||    
T  24125176 gttgaaatttggggtctaactcatccttacaaa 24125144  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 137
Target Start/End: Complemental strand, 27760489 - 27760457
Alignment:
Q  105 gttgaaatttggggtctaactcatcctaacaaa 137  Q
    ||||||||||||||||||||||||||| |||||    
T  27760489 gttgaaatttggggtctaactcatccttacaaa 27760457  T

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Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 320
Target Start/End: Complemental strand, 5557265 - 5557187
Alignment:
Q  242 gacccaatgggcatgaagtgtggcattgcggaatcccaatggtggatcttggataggctctgataccatgttaaaattt 320  Q
    |||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||| | ||| ||| |||||| ||||||    
T  5557265 gacccaatgggcttgaagcgtggcattgcggaatcccaacggtggatcttgaataagttctaatatcatgttgaaattt 5557187  T

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Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 137
Target Start/End: Original strand, 15102614 - 15102646
Alignment:
Q  105 gttgaaatttggggtctaactcatcctaacaaa 137  Q
    ||||||||||||||||||||||||||| |||||    
T  15102614 gttgaaatttggggtctaactcatccttacaaa 15102646  T

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Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 137
Target Start/End: Complemental strand, 16590298 - 16590266
Alignment:
Q  105 gttgaaatttggggtctaactcatcctaacaaa 137  Q
    ||||||||||||||||||||||||||| |||||    
T  16590298 gttgaaatttggggtctaactcatccttacaaa 16590266  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 137
Target Start/End: Original strand, 16605082 - 16605114
Alignment:
Q  105 gttgaaatttggggtctaactcatcctaacaaa 137  Q
    ||||||||||||||||||||||||||| |||||    
T  16605082 gttgaaatttggggtctaactcatccttacaaa 16605114  T

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Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 137
Target Start/End: Original strand, 17096688 - 17096720
Alignment:
Q  105 gttgaaatttggggtctaactcatcctaacaaa 137  Q
    ||||||||||||||||||||||||||| |||||    
T  17096688 gttgaaatttggggtctaactcatccttacaaa 17096720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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