View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3455_low_2 (Length: 2962)
Name: NF3455_low_2
Description: NF3455
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3455_low_2 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 2506; Significance: 0; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 2506; E-Value: 0
Query Start/End: Original strand, 356 - 2943
Target Start/End: Complemental strand, 4232865 - 4230278
Alignment:
| Q |
356 |
cctaaagttttctgttgtgctgattgatacatatttgaatatacatgtatataatgttattttagcatcgtttatgcttgttactcttattttattttaa |
455 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4232865 |
cctaaagttttctgttgtgctgattgatacatatatgaatatacatgtatataatgttattttagcatcgtttatgcttgttactcttattttattttaa |
4232766 |
T |
|
| Q |
456 |
ttttgttgttgaattctgttttctatttagtctccttcaaacttgaacgttagaaattttgttgttgctcttattttgtactcatgtatggtcttcattt |
555 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
4232765 |
ttttgttgttgaattctgttttctatttagtctccttcaaacttgaacgttagaaattttgttgttgctcttattttgtactcatgtatggtcttcatgt |
4232666 |
T |
|
| Q |
556 |
gttgatttggctcatcgtttgtgattttaacttgaaggaccaagggttttgtattttcaaacgtgggtttcttttatatgttgttattttgtttgattat |
655 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4232665 |
gttgatttggctcatcgtttgtgattttaacttgaaggaccaagggttttgtattttcaaacgtgggtttcttttatatgttgttattttgtttgattat |
4232566 |
T |
|
| Q |
656 |
tctgctgaaaactttattgctttgattttggtatgaatgttatctgttgtgatgaagatgtatacataaatgcgtgtgtgatgaagatgttctttttgaa |
755 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
4232565 |
tctgctgaaatcttcattgctttgattttggtatgaatgttatctgttgtgatgaagatgtatacagaaatgcgtgtgtgatgaagatgttctttttgaa |
4232466 |
T |
|
| Q |
756 |
ttgctttatgaatgtttgtgtttagaatattatcttactgaatgtattatgctctttaaacttgaattgttgacctggatatcatgaagtatgtatcaga |
855 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4232465 |
ttgctttatgaatgtttgtgtttagaatattatcttactgaatgtattatgctctttaaacttgaattgttgacctggatatcatgaagtatgtatcaga |
4232366 |
T |
|
| Q |
856 |
atgttgctgttgttgctcgtatttaataaattaatttattgtttgaaactctgaatggctgatcatttgtgattttaagacacatgtctttatccttgtg |
955 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4232365 |
atgttgctgttgttgctcttatttaataaattaatttattgtttgaaactctgaatggctgatcatttgtgattttaagacacatgtctttatccttgtg |
4232266 |
T |
|
| Q |
956 |
tcttgatcaattgatagtttaccgttaatttccttacnnnnnnnnnnnnn-gaagtatatacttatgttgttttctttgttgaatttgcagaactttttg |
1054 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4232265 |
tcttgatcaattgatagtttaccgttaatttccttactttttctttcttttgaagtatatacttatgttgttttctttgttgaatttgcagaactttttg |
4232166 |
T |
|
| Q |
1055 |
tggttttaaacttttaaggacaatgggtaaggaaaaggttcacattaacattgttgtcattggccatgtcgactctgggaagtcaactaccactggtcac |
1154 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4232165 |
tggttttaaacttttaaggacaatgggtaaggaaaaggttcacattaacattgttgtcattggccatgtcgactctgggaagtcaactaccactggtcac |
4232066 |
T |
|
| Q |
1155 |
ttgatctacaagcttggaggtattgacaagcgtgtgattgagaggtttgagaaagaagctgctgagatgaacaagcgttcattcaagtatgcttgggttc |
1254 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
4232065 |
ttgatctacaagcttggaggtattgacaagcgtgtgattgagaggtttgagaaagaagctgctgagatgaacaagcgttcatttaagtatgcttgggttc |
4231966 |
T |
|
| Q |
1255 |
ttgacaagctcaaggctgagcgtgaaagaggtatcacaattgacattgctctgtggaagtttgagaccactaagtactactgcactgtcattgatgcccc |
1354 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4231965 |
ttgacaagctcaaggctgagcgtgaaagaggtatcacaattgacattgctctgtggaagtttgagaccactaagtactactgcactgtcattgatgcccc |
4231866 |
T |
|
| Q |
1355 |
tggacacagggatttcattaagaacatgattactggtacatcccaagctgattgtgctgttctcatcattgattccaccactggtggttttgaagctggt |
1454 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4231865 |
tggacacagggatttcattaagaacatgattactggtacatcccaagctgattgtgctgttctcatcattgattccaccactggtggttttgaagctggt |
4231766 |
T |
|
| Q |
1455 |
atttccaaggatggtcagactcgtgaacatgctctccttgctttcactcttggtgtgaggcaaatgatctgctgctgcaacaaggtatttgaactgtaaa |
1554 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4231765 |
atttccaaggatggtcagactcgtgaacatgctctccttgctttcactcttggtgtgaggcaaatgatctgctgctgcaacaaggtatttgaactgtaaa |
4231666 |
T |
|
| Q |
1555 |
ttttttgattcccctttgtagttgcatttggatatttttataatttgcttatacaagtactgattttttgctatcttgaacagatggacgccactactcc |
1654 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4231665 |
ttttttgattcccctttgtagttgcatttggatatttttataatttgcttatacaagtactgattttttgctatcttgaacagatggacgccactactcc |
4231566 |
T |
|
| Q |
1655 |
caagtactccaagagcaggtatgatgaaattgtgaaggaagtatcatcctacatgaagaaggttggctataacccagataaaattccatttgttcccatc |
1754 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4231565 |
caagtactccaagagcaggtatgatgaaattgtgaaggaagtatcatcctacatgaagaaggttggctataacccagataaaattccatttgttcccatc |
4231466 |
T |
|
| Q |
1755 |
tctggttttgagggagataacatgattgagcgctctacaaatcttgactggtacaagggtccaacacttcttgaggctcttgatcaaatcaatgagccta |
1854 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4231465 |
tctggttttgagggagataacatgattgagcgctctacaaatcttgactggtacaagggtccaacacttcttgaggctcttgatcaaatcaatgagccta |
4231366 |
T |
|
| Q |
1855 |
agaggccatcagacaagcccctccgactacctcttcaggatgtctacaagattggaggaattggaactgttcctgtgggacgtgttgagactggtaccat |
1954 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4231365 |
agaggccatcagacaagcccctccgactacctcttcaggatgtctacaagattggaggaattggaactgttcctgtgggacgtgttgagactggtaccat |
4231266 |
T |
|
| Q |
1955 |
gaaacctggaatggtggtgacttttgctccaactggactgcaaactgaagtcaagtctgtggagatgcatcatgaatctctcactgaggcacttcccggt |
2054 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4231265 |
gaaacctggaatggtggtgacttttgctccaactggactgcaaactgaagtcaagtctgtggagatgcatcatgaatctctcactgaggcacttcccggt |
4231166 |
T |
|
| Q |
2055 |
gacaatgtgggatttaatgttaagaatgtttctgtcaaggatctcaagcgtggttatgttgcctcaaacaccaaggatgacccagccaaggaggctgcta |
2154 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4231165 |
gacaatgtgggatttaatgttaagaatgtttctgtcaaggatctcaagcgtggttatgttgcctcaaacaccaaggatgacccagccaaggaggctgcta |
4231066 |
T |
|
| Q |
2155 |
acttcacatctcaggtgattatcatgaatcaccctggccagattggaaatggttatgcccctgttcttgactgccacacctcccacattgcagtcaagtt |
2254 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4231065 |
acttcacatctcaggtgattatcatgaatcaccctggccagattggaaatggttatgcccctgttcttgactgccacacctcccacattgcagtcaagtt |
4230966 |
T |
|
| Q |
2255 |
tgctgagcttgttactaagattgacaggcgttctggtaaggagatcgagaaggagcctaaattcctgaagaatggagatgctggtattattaagatgatt |
2354 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4230965 |
tgctgagcttgttactaagattgacaggcgttctggtaaggagatcgagaaggagcctaaattcctgaagaatggagatgctggtattattaagatgatt |
4230866 |
T |
|
| Q |
2355 |
cccaccaagcccatggtggttgagactttctctgaatatcctccacttggccgttttgctgtcagagatatgcggcaaactgtggctgttggggttatca |
2454 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4230865 |
cccaccaagcccatggtggttgagactttctctgaatatcctccacttggccgttttgctgtcagagatatgcggcaaactgtggctgttggggttatca |
4230766 |
T |
|
| Q |
2455 |
agggtgtggagaagaaggaacctggcacagctaagataactaagtcagcagccaagaagaaatgaaccgtgcaggatgattttccttgggaagtttatag |
2554 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4230765 |
agggtgtggagaagaaggaacctggcacagctaagataactaagtcagcagccaagaagaaatgaaccgtgcaggatgattttccttgggaagtttatag |
4230666 |
T |
|
| Q |
2555 |
tcgttattacaataaatggtttgtggttcttagtatttctatttcgtgtcttgttaagttgttttttggattaagtgtgaagtctgcaccgtcatctccc |
2654 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4230665 |
tcgttattacaataaatggtttgtggttcttagtatttctatttcgtgtcttgttaagttgttttttggattaagtgtgaagtctgcaccgtcatctccc |
4230566 |
T |
|
| Q |
2655 |
agcttttgttcccagaactgggttctagatcgacggtggcatgactagttatttttcttgtttctgctttaattgtcttgtcttgtgtgaacacctgaat |
2754 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4230565 |
agcttttgttcccagaactgggttctagatcgacggtggcatgactagttatttttcttgtttctgctttaattgtcttgtcttgtgtgaacacctgaat |
4230466 |
T |
|
| Q |
2755 |
tttacaagcagcaagtttccggacctgctgatttgtttttaatatcaactctatatctgcgtgtttattccttggtgtgatgtttaatctttgctggggc |
2854 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4230465 |
tttacaagcagcaagtttccggacctgctg-tttgtttttaatatcaactctatatctgcgtgtttattccttggtgtgatgtttaatctttgctggggc |
4230367 |
T |
|
| Q |
2855 |
aagtgtctgatgttttaggcaatttcattgcccagaatgtcaggagcatttttgaatcagcagcatctgaatattattgttctcttaat |
2943 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4230366 |
aagtgtctgatgttttaggcaatttcattgcccagaatgtcaggagcatttttgaatcagcagcatctgaatattattgttctcttaat |
4230278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 202; E-Value: 1e-109
Query Start/End: Original strand, 18 - 293
Target Start/End: Complemental strand, 4233203 - 4232928
Alignment:
| Q |
18 |
aattcaatatctcctttttcgtttctaattcacatatcgatttcgccgattcatttctgattacgcagaatcgttacaaattagnnnnnnnnnnnnnnnn |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
4233203 |
aattcaatatctcctttttcgtttctaattcacatatccatttcgccgattcatttctgattacgcagaatcgttaaaaattagtttctttttgttttca |
4233104 |
T |
|
| Q |
118 |
nnnnnnattatggtatgataatcatgatgaaatttatgtgcctgtttaattgttattctaaattttgataacgtgttaatcgtttatgattttggtattc |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4233103 |
tttctgattatggtatgataatcatgatgaaatttatgtgcctgtttaattgttattctaaattttgataacgtgttaatcgtttatgattttggtattc |
4233004 |
T |
|
| Q |
218 |
gattatgctgtgataatctggtgaaatttatgtgcttgtttaattgttattctgaatttagatattgtgatgatcg |
293 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4233003 |
gattatgctgtgataatctggtgaaatttatgtgcttgtttaattgttattctgaatttagatattgtgatgatcg |
4232928 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-21
Query Start/End: Original strand, 1897 - 2255
Target Start/End: Original strand, 19964974 - 19965335
Alignment:
| Q |
1897 |
tctacaagattggaggaattggaactgttcctgtgggacgtgttgagactggtaccatgaaacctggaatggtggtgacttttgctccaactggactgca |
1996 |
Q |
| |
|
|||||||| |||||||||| |||| ||| |||||||||||| ||| ||||||| | ||| |||||| |||||| ||| |||||| |||||||| ||||| |
|
|
| T |
19964974 |
tctacaaggttggaggaatcggaaatgtgcctgtgggacgtattgtgactggttacttgacacctgggatggtgatgaattttgccccaactgggctgca |
19965073 |
T |
|
| Q |
1997 |
aactgaagtcaagtctgtggagatgcatcatgaa--tc-tctcactgaggcacttcccggtgacaatgtgggatttaatgttaagaatgtttctgtcaag |
2093 |
Q |
| |
|
| |||| ||||||||| |||| || |||| || |||| ||| || |||| |||||| ||||||||| |||| || ||||| ||| ||| |
|
|
| T |
19965074 |
acgcaaagtgaagtctgtgaagattgatggtgaagttcttctctctgttgcctttcctggtgactttgtgggattagatgtcgaggatgttgctgctaag |
19965173 |
T |
|
| Q |
2094 |
gatctcaagcgtggttatgttgcctcaaacaccaaggatgacccagccaaggaggctgctaacttcacatctcaggtgattatcatgaatcaccctggcc |
2193 |
Q |
| |
|
|||||| ||| |||||||||||||||||| |||| |||||||||||| || ||| ||| |||| |||||| | | || || | || |||||||| |
|
|
| T |
19965174 |
gatctccagccaggttatgttgcctcaaactccaacaatgacccagccatgggggccgctgactttacatcttatcttatcattacaaaggaccctggca |
19965273 |
T |
|
| Q |
2194 |
agattggaaatggttatgcccctgttcttgactgccacacctcccacattgcagtcaagttt |
2255 |
Q |
| |
|
|||| || ||| ||| | |||||||||||||||||||||||||||||||| ||| ||||| |
|
|
| T |
19965274 |
tgattcaaactggctatacacctgttcttgactgccacacctcccacattgctgtcgagttt |
19965335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 52; E-Value: 8e-20
Query Start/End: Original strand, 1099 - 1198
Target Start/End: Original strand, 19964623 - 19964722
Alignment:
| Q |
1099 |
ttaacattgttgtcattggccatgtcgactctgggaagtcaactaccactggtcacttgatctacaagcttggaggtattgacaagcgtgtgattgagag |
1198 |
Q |
| |
|
|||||||||| || ||||| ||||| ||||||||||||||||| || ||||||||||||||| ||||||||||| ||||||||| | ||| |||||||| |
|
|
| T |
19964623 |
ttaacattgtggttattggtcatgttgactctgggaagtcaaccactactggtcacttgatccacaagcttggatatattgacaaccatgtcattgagag |
19964722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 52; E-Value: 8e-20
Query Start/End: Original strand, 2331 - 2446
Target Start/End: Original strand, 19965383 - 19965498
Alignment:
| Q |
2331 |
gatgctggtattattaagatgattcccaccaagcccatggtggttgagactttctctgaatatcctccacttggccgttttgctgtcagagatatgcggc |
2430 |
Q |
| |
|
||||||| | || |||||||||||||| ||||||| |||||||| ||| |||||||| ||||||||||||| ||| |||||| || ||||| ||||| | |
|
|
| T |
19965383 |
gatgctgctgttgttaagatgattcccgccaagcctatggtggtagaggctttctctcaatatcctccactcggctgttttgttgctagagacatgcgtc |
19965482 |
T |
|
| Q |
2431 |
aaactgtggctgttgg |
2446 |
Q |
| |
|
||||||||||| |||| |
|
|
| T |
19965483 |
aaactgtggcttttgg |
19965498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 211
Target Start/End: Complemental strand, 4233002 - 4232916
Alignment:
| Q |
124 |
attatggtatgataatcatgatgaaatttatgtgcctgtttaattgttattctaaattttgataacgtgttaatcgtttatgattttg |
211 |
Q |
| |
|
|||||| | |||||||| || |||||||||||||| ||||||||||||||||| ||||| |||| ||| | |||||||||||||||| |
|
|
| T |
4233002 |
attatgctgtgataatc-tggtgaaatttatgtgcttgtttaattgttattctgaatttagatattgtgatgatcgtttatgattttg |
4232916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 982; Significance: 0; HSPs: 27)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 982; E-Value: 0
Query Start/End: Original strand, 1022 - 2724
Target Start/End: Complemental strand, 3301462 - 3299761
Alignment:
| Q |
1022 |
ttgttttctttgttgaatttgcagaactttttgtggttttaaacttttaaggacaa-tgggtaaggaaaaggttcacattaacattgttgtcattggcca |
1120 |
Q |
| |
|
||||| ||||||||||||| ||||| ||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
3301462 |
ttgttctctttgttgaattggcagatcttttcgtggttttaagcttttaaggacaaatgggtaaggaaaaggttcacattaacattgttgtcattggtca |
3301363 |
T |
|
| Q |
1121 |
tgtcgactctgggaagtcaactaccactggtcacttgatctacaagcttggaggtattgacaagcgtgtgattgagaggtttgagaaagaagctgctgag |
1220 |
Q |
| |
|
||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3301362 |
tgtcgactccgggaagtcaaccaccaccggtcacttgatctacaagcttggaggtattgacaagcgtgtgattgagaggtttgagaaagaagctgctgag |
3301263 |
T |
|
| Q |
1221 |
atgaacaagcgttcattcaagtatgcttgggttcttgacaagctcaaggctgagcgtgaaagaggtatcacaattgacattgctctgtggaagtttgaga |
1320 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3301262 |
atgaacaagcgttcattcaagtatgcttgggtgctcgacaagctcaaggctgaatgtgaaagaggtatcacaattgacattgctctgtggaagtttgaga |
3301163 |
T |
|
| Q |
1321 |
ccactaagtactactgcactgtcattgatgcccctggacacagggatttcattaagaacatgattactggtacatcccaagctgattgtgctgttctcat |
1420 |
Q |
| |
|
| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |
|
|
| T |
3301162 |
ctactaagtactactgcactgtcattgatgcccccggacacagggatttcattaagaacatgattactggaacatcccaagctgattgtgctgttctgat |
3301063 |
T |
|
| Q |
1421 |
cattgattccaccactggtggttttgaagctggtatttccaaggatggtcagactcgtgaacatgctctccttgctttcactcttggtgtgaggcaaatg |
1520 |
Q |
| |
|
|||||||||||| || |||||||||||||| ||||| || |||||||| ||||| |||||||| ||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
3301062 |
cattgattccactaccggtggttttgaagccggtatatcaaaggatgggcagacccgtgaacacgctcttcttgctttcactcttggtgtgaagcaaatg |
3300963 |
T |
|
| Q |
1521 |
atctgctgctgcaacaaggtatttgaactgtaaattttttgattcccctttgtagttgcatttggatatttttataatt----tgcttatacaagtactg |
1616 |
Q |
| |
|
|| | |||||||||||||||||||||| |||| | ||||||| || |||||||| ||||| | | ||| | |||||||| | || |
|
|
| T |
3300962 |
atttt-tgctgcaacaaggtatttgaacg------ttttag----ccctttgaagatgcatttgattatttctgtgattactttatttatacaaattctc |
3300874 |
T |
|
| Q |
1617 |
atttt-ttgctatcttgaacagatggacgccactactcccaagtactccaagagcaggtatgatgaaattgtgaaggaagtatcatcctacatgaagaag |
1715 |
Q |
| |
|
||| | |||||||| |||||||||||| |||||||| || |||||||| ||| | |||||||| ||||||||||||||||| |||||||| |||||||| |
|
|
| T |
3300873 |
attgtcttgctatcgtgaacagatggatgccactacacctaagtactcgaagggtaggtatgaagaaattgtgaaggaagtttcatcctatttgaagaag |
3300774 |
T |
|
| Q |
1716 |
gttggctataacccagataaaattccatttgttcccatctctggttttgagggagataacatgattgagcgctctacaaatcttgactggtacaagggtc |
1815 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
3300773 |
gttggctataacccagacaaaattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaatcttgactggtacaagggtc |
3300674 |
T |
|
| Q |
1816 |
caacacttcttgaggctcttgatcaaatcaatgagcctaagaggccatcagacaagcccctccgactacctcttcaggatgtctacaagattggaggaat |
1915 |
Q |
| |
|
| || ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
3300673 |
ctacccttcttgaggctcttgaccaaatcaacgagcctaagaggccatcagacaagcccctccgtctaccgcttcaggatgtctacaagattggaggaat |
3300574 |
T |
|
| Q |
1916 |
tggaactgttcctgtgggacgtgttgagactggtaccatgaaacctggaatggtggtgacttttgctccaactggactgcaaactgaagtcaagtctgtg |
2015 |
Q |
| |
|
||| ||||| |||||||| ||||| ||||||||| ||| |||||||||||||| || |||||||| || ||||||||| ||||||||| ||||||||| |
|
|
| T |
3300573 |
tgggactgtgcctgtggggcgtgtcgagactggtgtcataaaacctggaatggttgtcacttttgcccctactggactgacaactgaagtgaagtctgtg |
3300474 |
T |
|
| Q |
2016 |
gagatgcatcatgaatctctcactgaggcacttcccggtgacaatgtgggatttaatgttaagaatgtttctgtcaaggatctcaagcgtggttatgttg |
2115 |
Q |
| |
|
||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||| |
|
|
| T |
3300473 |
gagatgcatcatgaagctctcactgaggctcttcctggtgacaatgtgggatttaatgttaagaacgttgctgttaaggatctcaagcgtggttatgttg |
3300374 |
T |
|
| Q |
2116 |
cctcaaacaccaaggatgacccagccaaggaggctgctaacttcacatctcaggtgattatcatgaatcaccctggccagattggaaatggttatgcccc |
2215 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||||||||| |||||||| ||||| || ||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
3300373 |
cctcaaactccaaggatgaccctgccaaggaggctgctaactttacatctcaagtgatcattatgaatcaccctggccagattggaaatggctatgcccc |
3300274 |
T |
|
| Q |
2216 |
tgttcttgactgccacacctcccacattgcagtcaagtttgctgagcttgttactaagattgacaggcgttctggtaaggagatcgagaaggagcctaaa |
2315 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||| |
|
|
| T |
3300273 |
tgttcttgactgccacacctcccacattgctgtcaaatttgctgagcttgttactaagattgacaggcgttctggaaaggagattgagaaggagcccaaa |
3300174 |
T |
|
| Q |
2316 |
ttcctgaagaatggagatgctggtattattaagatgattcccaccaagcccatggtggttgagactttctctgaatatcctccacttggccgttttgctg |
2415 |
Q |
| |
|
||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
3300173 |
ttcttgaagaacggtgatgctggtattattaagatgattcccaccaagcccatggtggttgagactttctctgagtatcctccacttggccgtttcgctg |
3300074 |
T |
|
| Q |
2416 |
tcagagatatgcggcaaactgtggctgttggggttatcaagggtgtggagaagaaggaacctggcacag--ct--aagataactaagtcagcagccaaga |
2511 |
Q |
| |
|
|||| |||||||| || |||||||||||||| || ||||||| ||||||||||||||| || || || || | | ||| ||||||||| |||| |
|
|
| T |
3300073 |
tcagggatatgcgtcagactgtggctgttggtgtcatcaaggctgtggagaagaaggatcccagcggaggacttaataaaaacaaagtcagcattgaaga |
3299974 |
T |
|
| Q |
2512 |
agaaatgaaccgtgcaggatgattttccttgggaagtttatagtcgttattacaataaatggtttgtggttcttagtatttctatttcgtgtcttgttaa |
2611 |
Q |
| |
|
|||| |||||||||||||| ||| | | |||||| ||| | || ||||||| |||||||||| | ||||| || ||||| |||||||||| |
|
|
| T |
3299973 |
agaagtgaaccgtgcaggaagatctatccaaggaagtctattatggtgattacaagaaatggtttgctctatgtagtacttttatttttcgtcttgttaa |
3299874 |
T |
|
| Q |
2612 |
gttgttttttggattaagtgtgaagtctgcaccgtcatctcccagcttttgttcccagaactgggttctagatcgacggtggcatgactagttatttttc |
2711 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||||||||| || |||||||||||| ||||||||||| |||||||||||||| | ||| || |||| | |
|
|
| T |
3299873 |
cttgtttttcggattaagtgtcaagtctgcaccgtcatctcgcaacttttgttcccaaaactgggttcttgatcgacggtggcagggctatttcttttcc |
3299774 |
T |
|
| Q |
2712 |
ttgtttctgcttt |
2724 |
Q |
| |
|
||||| |||||| |
|
|
| T |
3299773 |
gtgtttatgcttt |
3299761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 940; E-Value: 0
Query Start/End: Original strand, 1171 - 2855
Target Start/End: Complemental strand, 43045576 - 43043887
Alignment:
| Q |
1171 |
gaggtattgacaagcgtgtgattgagaggtttgagaaagaagctgctgagatgaacaagcgttcattcaagtatgcttgggttcttgacaagctcaaggc |
1270 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
43045576 |
gaggtattgacaagcgtgtcattgagaggtttgagaaagaagctgctgagatgaacaagcgttcattcaagtatgcctgggtccttgacaagctcaaggc |
43045477 |
T |
|
| Q |
1271 |
tgagcgtgaaagaggtatcacaattgacattgctctgtggaagtttgagaccactaagtactactgcactgtcattgatgcccctggacacagggatttc |
1370 |
Q |
| |
|
||| ||||||||||||||||| |||||||||||||| |||||||||||||| || |||||||||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
43045476 |
tgaacgtgaaagaggtatcaccattgacattgctctctggaagtttgagacaaccaagtactactgcactgtcatcgatgcccccggacacagggatttc |
43045377 |
T |
|
| Q |
1371 |
attaagaacatgattactggtacatcccaagctgattgtgctgttctcatcattgattccaccactggtggttttgaagctggtatttccaaggatggtc |
1470 |
Q |
| |
|
|||||||||||||| || || |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||| |
|
|
| T |
43045376 |
attaagaacatgatcaccggaacatcccaagctgattgtgccgttctcatcattgattccactactggtggttttgaagccggtatttctaaggatggtc |
43045277 |
T |
|
| Q |
1471 |
agactcgtgaacatgctctccttgctttcactcttggtgtgaggcaaatgatctgctgctgcaacaaggtatttgaactgtaaattttttgattcccctt |
1570 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||| |||| | ||| | |
|
|
| T |
43045276 |
agacccgtgaacatgctctccttgctttcactcttggtgtgaagcaaatgatctgctgttgcaacaaggtattt--------aatattttcagcccc--t |
43045187 |
T |
|
| Q |
1571 |
tgtagttgcat--ttggatatttttataatttgcttatacaagtactgattttttgctatcttgaacagatggacgccactactcccaagtactccaaga |
1668 |
Q |
| |
|
|| ||||| || ||| ||||||||||||| |||| ||||||| |||| |||||||||||||||||| || ||||| ||||||||||||||| |
|
|
| T |
43045186 |
tgaagttgtatatttgattatttttataattcatttatttaagtactaatttgcatctatcttgaacagatggatgctactacacccaagtactccaagg |
43045087 |
T |
|
| Q |
1669 |
gcaggtatgatgaaattgtgaaggaagtatcatcctacatgaagaaggttggctataacccagataaaattccatttgttcccatctctggttttgaggg |
1768 |
Q |
| |
|
| || ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
43045086 |
gtagatatgatgaaattgtgaaggaagtttcatcctatttgaagaaggttggctataacccagacaaaattccatttgttcccatctctggttttgaggg |
43044987 |
T |
|
| Q |
1769 |
agataacatgattgagcgctctacaaatcttgactggtacaagggtccaacacttcttgaggctcttgatcaaatcaatgagcctaagaggccatcagac |
1868 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
43044986 |
agataacatgatcgagcgctctacaaaccttgactggtacaagggtccaacccttcttgaggcccttgaccaaatcaatgagcctaagaggccttcagac |
43044887 |
T |
|
| Q |
1869 |
aagcccctccgactacctcttcaggatgtctacaagattggaggaattggaactgttcctgtgggacgtgttgagactggtaccatgaaacctggaatgg |
1968 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| ||| ||||||||||||| |
|
|
| T |
43044886 |
aagcccctccgactaccacttcaggatgtctacaagattggaggaattggaactgtgcctgtggggcgtgtcgagactggtgtcataaaacctggaatgg |
43044787 |
T |
|
| Q |
1969 |
tggtgacttttgctccaactggactgcaaactgaagtcaagtctgtggagatgcatcatgaatctctcactgaggcacttcccggtgacaatgtgggatt |
2068 |
Q |
| |
|
| || |||||||| || ||||||||| ||||||||||||||| |||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||||| |
|
|
| T |
43044786 |
ttgtcacttttgcccctactggactgacaactgaagtcaagtccgtggagatgcatcatgaagctctcacagaggcccttcctggtgacaatgtgggatt |
43044687 |
T |
|
| Q |
2069 |
taatgttaagaatgtttctgtcaaggatctcaagcgtggttatgttgcctcaaacaccaaggatgacccagccaaggaggctgctaacttcacatctcag |
2168 |
Q |
| |
|
|||||| ||||||||| |||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
43044686 |
taatgtcaagaatgttgctgttaaggatctcaagcgtgggtatgttgcctcaaactccaaggatgacccagccaaggaggctgctaactttacatctcaa |
43044587 |
T |
|
| Q |
2169 |
gtgattatcatgaatcaccctggccagattggaaatggttatgcccctgttcttgactgccacacctcccacattgcagtcaagtttgctgagcttgtta |
2268 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
43044586 |
gtgatcataatgaatcaccctggccagattggaaatggctatgcccctgttcttgactgccacacctcccacattgctgtcaagtttgctgagcttgtta |
43044487 |
T |
|
| Q |
2269 |
ctaagattgacaggcgttctggtaaggagatcgagaaggagcctaaattcctgaagaatggagatgctggtattattaagatgattcccaccaagcccat |
2368 |
Q |
| |
|
|||||||||| |||||||||||||||||||| ||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43044486 |
ctaagattgataggcgttctggtaaggagattgagaaggagcccaaattcttgaagaatggcgatgctggtattattaagatgattcccaccaagcccat |
43044387 |
T |
|
| Q |
2369 |
ggtggttgagactttctctgaatatcctccacttggccgttttgctgtcagagatatgcggcaaactgtggctgttggggttatcaagggtgtggagaag |
2468 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
43044386 |
ggtggttgagactttctctgaatatcctccactcggccgttttgctgttagagacatgcgtcaaactgtggctgttggggtcatcaaggctgtggagaag |
43044287 |
T |
|
| Q |
2469 |
aaggaacc---tggcacagctaagataactaagtcagcagccaagaagaaatgaaccgtgcaggatgat---tttccttgggaagtttatagtcgttatt |
2562 |
Q |
| |
|
||||| || ||| | |||| || ||||||||| |||||||| ||||||| |||||||||| ||| ||||||||| ||| | |||||| |
|
|
| T |
43044286 |
aaggatcccagtggaggacttaagcagaccaagtcagcattgaagaagaagtgaaccgagcaggatgatctatttacttgggaagcatatcatagttatt |
43044187 |
T |
|
| Q |
2563 |
acaataaatggtttgtggttcttagtatttctatttcgtgtcttgttaagttgttttttggattaagtgtgaagtctgcaccgtcatctcccagcttttg |
2662 |
Q |
| |
|
|||||||||||| | |||| ||||||||||||||||| ||| ||| | |||||||| ||||||||| ||||||||||| ||||||| ||||| || |
|
|
| T |
43044186 |
acaataaatggtctttggtccttagtatttctatttctcttctagtttacttgtttttcatattaagtgtcaagtctgcaccttcatctcttagcttgtg |
43044087 |
T |
|
| Q |
2663 |
ttcccagaactgggttctagatcgacggtggcatgactagttatttttcttgtttctgctttaattgtcttgtcttgtgtgaacacctgaatttt----a |
2758 |
Q |
| |
|
||| ||||||||||||||||||||||||||||| |||| | | ||| | ||| |||||||||||| ||||| || ||||||| || ||||| |
|
|
| T |
43044086 |
ttctcagaactgggttctagatcgacggtggcagtactatatctgttttgtttttatgctttaattgttgtgtctagtctgaacacttggattttgtaag |
43043987 |
T |
|
| Q |
2759 |
caagcagcaagtttccggacctgctga-tttgttt-ttaatatcaactctatatctgcgtgtttattccttggtgtgatgtttaa-tctttgctggggca |
2855 |
Q |
| |
|
||||||| ||||| | |||| |||||| ||||||| | |||||||||||| ||| | ||||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
43043986 |
caagcagtaagttccaggacttgctgactttgtttctaaatatcaactctttatttttgtgtttattccttggtgtgatgtttaagtttttgctggggca |
43043887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 657; E-Value: 0
Query Start/End: Original strand, 1625 - 2911
Target Start/End: Original strand, 43066861 - 43068154
Alignment:
| Q |
1625 |
ctatcttgaacagatggacgccactactcccaagtactccaagagcaggtatgatgaaattgtgaaggaagtatcatcctacatgaagaaggttggctat |
1724 |
Q |
| |
|
|||||||||||||||||| || ||||| ||||||||||||||| | || ||||||||||||||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
43066861 |
ctatcttgaacagatggatgctactacacccaagtactccaagggtagatatgatgaaattgtgaaggaagtttcatcctatttgaagaaggttggctat |
43066960 |
T |
|
| Q |
1725 |
aacccagataaaattccatttgttcccatctctggttttgagggagataacatgattgagcgctctacaaatcttgactggtacaagggtccaacacttc |
1824 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
43066961 |
aacccagacaaaattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaaccttgactggtacaagggtccaacccttc |
43067060 |
T |
|
| Q |
1825 |
ttgaggctcttgatcaaatcaatgagcctaagaggccatcagacaagcccctccgactacctcttcaggatgtctacaagattggaggaattggaactgt |
1924 |
Q |
| |
|
||||||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
43067061 |
ttgaggcccttgaccaaatcaacgagcctaagaggccttcagacaagcccctccgactaccacttcaagatgtctacaagattggaggaattggaactgt |
43067160 |
T |
|
| Q |
1925 |
tcctgtgggacgtgttgagactggtaccatgaaacctggaatggtggtgacttttgctccaactggactgcaaactgaagtcaagtctgtggagatgcat |
2024 |
Q |
| |
|
|||||||| ||||| ||||||||| ||| |||||||||||||| || |||||||| || ||||||||| ||||||||||||||| |||||||||||| |
|
|
| T |
43067161 |
gcctgtggggcgtgtcgagactggtgtcataaaacctggaatggttgtcacttttgcccctactggactgacaactgaagtcaagtccgtggagatgcat |
43067260 |
T |
|
| Q |
2025 |
catgaatctctcactgaggcacttcccggtgacaatgtgggatttaatgttaagaatgtttctgtcaaggatctcaagcgtggttatgttgcctcaaaca |
2124 |
Q |
| |
|
|||||| ||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
43067261 |
catgaagctctcacagaggcccttcctggtgacaatgtgggatttaatgtcaagaatgttgctgttaaggatctcaagcgtgggtatgttgcctcaaact |
43067360 |
T |
|
| Q |
2125 |
ccaaggatgacccagccaaggaggctgctaacttcacatctcaggtgattatcatgaatcaccctggccagattggaaatggttatgcccctgttcttga |
2224 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||| ||||| || ||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
43067361 |
ccaaggatgacccagccaaggaggctgctaactttacatctcaagtgatcataatgaatcaccctggccagattggaaatggctatgcccctgttcttga |
43067460 |
T |
|
| Q |
2225 |
ctgccacacctcccacattgcagtcaagtttgctgagcttgttactaagattgacaggcgttctggtaaggagatcgagaaggagcctaaattcctgaag |
2324 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||| ||||| |
|
|
| T |
43067461 |
ctgccacacctcccacattgctgtcaagtttgctgagcttgttactaagattgataggcgttctggtaaggagattgagaaggagcccaaattcttgaag |
43067560 |
T |
|
| Q |
2325 |
aatggagatgctggtattattaagatgattcccaccaagcccatggtggttgagactttctctgaatatcctccacttggccgttttgctgtcagagata |
2424 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| | |
|
|
| T |
43067561 |
aatggcgatgctggtattattaagatgattcccaccaagcccatggtggttgagactttctctgaatatcctccactcggccgttttgctgttagagaca |
43067660 |
T |
|
| Q |
2425 |
tgcggcaaactgtggctgttggggttatcaagggtgtggagaagaaggaacc---tggcacagctaagataactaagtcagcagccaagaagaaatgaac |
2521 |
Q |
| |
|
|||| ||||||||||||||||| || ||||| | ||||||||||||||| || ||| | |||| || ||||||||| |||||||| ||||| |
|
|
| T |
43067661 |
tgcgtcaaactgtggctgttggcgtcatcaaagctgtggagaagaaggatcccagtggaggacttaagcagaccaagtcagcattgaagaagaagtgaac |
43067760 |
T |
|
| Q |
2522 |
cgtgcaggatgattt---tccttgggaagtttatagtcgttattacaataaatggtttgtggttcttagtatttctatttcgtgtcttgttaagttgttt |
2618 |
Q |
| |
|
|| |||||||||| | | ||||||||| ||| | |||||||||||||||||| | |||| ||||||||||||||||| |||| ||| | |||||| |
|
|
| T |
43067761 |
cgagcaggatgatctatctacttgggaagcatatcatagttattacaataaatggtctttggtccttagtatttctatttctagtctagtttacttgttt |
43067860 |
T |
|
| Q |
2619 |
tttggattaagtgtgaagtctgcaccgtcatctcccagcttttgttcccagaactgggttctagatcgacggtggcatgactagttatttttcttgtttc |
2718 |
Q |
| |
|
|| ||||||||| ||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| || | | ||| | ||| |
|
|
| T |
43067861 |
ttcatattaagtgtcaagtctgcaccttcatctcttagcttttgttctcagaactgggttctagatcgacggtggcagcgctctatctgttttattttta |
43067960 |
T |
|
| Q |
2719 |
tgctttaattgtcttgtcttgtgtgaacacctgaattttacaagca----gcaagtttccggacctgctgatt-tgtttttaa-tatcaactctatatct |
2812 |
Q |
| |
|
|||||||||||| ||||| || |||| || || ||||| ||||| | ||||| | |||| |||||| | ||||| ||| |||||||||| ||| | |
|
|
| T |
43067961 |
tgctttaattgttgtgtctagtctgaa-acttggattttgtaagcaatcagtaagttccaggacttgctgactctgtttctaaatatcaactctttattt |
43068059 |
T |
|
| Q |
2813 |
gcgtgtttattccttggtgtgatgtttaatctt-tgctggggcaagtgtctgatgttttaggcaatttcattgcccagaatgtcaggagcatttttgaat |
2911 |
Q |
| |
|
|||||||| ||||||||||||||||| ||| |||||||| | ||||| |||||||||||||| || ||||| |||||||||||| ||||||||||| |
|
|
| T |
43068060 |
t--tgtttatttcttggtgtgatgtttaagcttgtgctggggaa--tgtct-atgttttaggcaatatcgttgccaagaatgtcaggatcatttttgaat |
43068154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 655; E-Value: 0
Query Start/End: Original strand, 1625 - 2911
Target Start/End: Complemental strand, 43083974 - 43082677
Alignment:
| Q |
1625 |
ctatcttgaacagatggacgccactactcccaagtactccaagagcaggtatgatgaaattgtgaaggaagtatcatcctacatgaagaaggttggctat |
1724 |
Q |
| |
|
|||||||||||||||||| || ||||| ||||||||||||||| | || ||||||||||||||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
43083974 |
ctatcttgaacagatggatgctactacacccaagtactccaagggtagatatgatgaaattgtgaaggaagtttcatcctatttgaagaaggttggctat |
43083875 |
T |
|
| Q |
1725 |
aacccagataaaattccatttgttcccatctctggttttgagggagataacatgattgagcgctctacaaatcttgactggtacaagggtccaacacttc |
1824 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
43083874 |
aacccagacaaaattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaaccttgactggtacaagggtccaacccttc |
43083775 |
T |
|
| Q |
1825 |
ttgaggctcttgatcaaatcaatgagcctaagaggccatcagacaagcccctccgactacctcttcaggatgtctacaagattggaggaattggaactgt |
1924 |
Q |
| |
|
||||||| ||||| |||||||| |||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
43083774 |
ttgaggcacttgaccaaatcaacgagcctaagaggccttcagacaagcccctccgactaccacttcaagatgtctacaagattggaggaattggaactgt |
43083675 |
T |
|
| Q |
1925 |
tcctgtgggacgtgttgagactggtaccatgaaacctggaatggtggtgacttttgctccaactggactgcaaactgaagtcaagtctgtggagatgcat |
2024 |
Q |
| |
|
|||||||| ||||| ||||||||| ||| |||||||||||||| | |||||||| || ||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
43083674 |
gcctgtggggcgtgtcgagactggtgtcataaaacctggaatggttatcacttttgcccctactggactgacaactgaagtcaagtctgtggagatgcat |
43083575 |
T |
|
| Q |
2025 |
catgaatctctcactgaggcacttcccggtgacaatgtgggatttaatgttaagaatgtttctgtcaaggatctcaagcgtggttatgttgcctcaaaca |
2124 |
Q |
| |
|
|||||| ||||||| ||||| ||||| ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
43083574 |
catgaagctctcacagaggcccttcctggtgacaatgtgggatttaatgtcaagaatgttgctgttaaggatctcaagcgtgggtatgttgcctcaaact |
43083475 |
T |
|
| Q |
2125 |
ccaaggatgacccagccaaggaggctgctaacttcacatctcaggtgattatcatgaatcaccctggccagattggaaatggttatgcccctgttcttga |
2224 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
43083474 |
ccaaggatgacccagccaaggaagctgctaactttacatctcaagtgatcatcatgaatcaccctggccagattggaaatggctatgcccctgttcttga |
43083375 |
T |
|
| Q |
2225 |
ctgccacacctcccacattgcagtcaagtttgctgagcttgttactaagattgacaggcgttctggtaaggagatcgagaaggagcctaaattcctgaag |
2324 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||| ||||| |
|
|
| T |
43083374 |
ctgccacacctcccacattgctgtcaagtttgctgagcttgttactaagattgataggcgttctggtaaggagattgagaaggagcccaaattcttgaag |
43083275 |
T |
|
| Q |
2325 |
aatggagatgctggtattattaagatgattcccaccaagcccatggtggttgagactttctctgaatatcctccacttggccgttttgctgtcagagata |
2424 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| | |
|
|
| T |
43083274 |
aatggcgatgctggtattattaagatgattcccaccaagcccatggtggttgagactttctctgaatatcctccactcggtcgttttgctgttagagaca |
43083175 |
T |
|
| Q |
2425 |
tgcggcaaactgtggctgttggggttatcaagggtgtggagaagaaggaacc---tggcacagctaagataactaagtcagcagccaagaagaaatgaac |
2521 |
Q |
| |
|
|||| ||||||||||||||||| || ||||| | ||||||||||||||| || ||| | |||| || ||||||||| |||||||| ||||| |
|
|
| T |
43083174 |
tgcgtcaaactgtggctgttggcgtcatcaaagctgtggagaagaaggatcccagtggaggacttaagcagaccaagtcagcattgaagaagaagtgaac |
43083075 |
T |
|
| Q |
2522 |
cgtgcaggatgat---tttccttgggaagtttatagtcgttattacaataaatggtttgtggttcttagtatttctatttcgtgtcttgttaagttgttt |
2618 |
Q |
| |
|
| |||||||| | | | ||||||||| ||| | |||||||||||||||||| | ||| ||||||||||||||||| |||| ||| | |||||| |
|
|
| T |
43083074 |
tgagcaggatggtctatctacttgggaagcatatcatagttattacaataaatggtcttgggtccttagtatttctatttctcgtctagtttacttgttt |
43082975 |
T |
|
| Q |
2619 |
tttggattaagtgtgaagtctgcaccgtcatctcccagcttttgttcccagaactgggttctagatcgacggtggcatgactagttatttttcttgtttc |
2718 |
Q |
| |
|
|| ||||||||| ||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||| || | | ||| | ||| |
|
|
| T |
43082974 |
ttcatattaagtgtcaagtctgcaccttcatctcttagcttttgttctcagaactgggttctagatcgacggtggcagcgctctatctgttttgttttta |
43082875 |
T |
|
| Q |
2719 |
tgctttaattgtcttgtcttgtgtgaacacctgaatttt----acaagcagcaagtttccggacctgctga-tttgttt-ttaatatcaactctatatct |
2812 |
Q |
| |
|
|||||||||||| ||||| || |||| || || ||||| ||||||| ||||| | | || |||||| | ||||| | ||||| |||||| ||| | |
|
|
| T |
43082874 |
tgctttaattgttgtgtctagtctgaa-acttggattttgtaagcaagcagtaagttccagaacttgctgactctgtttctaaatattaactctttattt |
43082776 |
T |
|
| Q |
2813 |
gcgtgtttattccttggtgtgatgtttaatc-tttgctggggcaagtgtctgatgttttaggcaatttcattgcccagaatgtcaggagcatttttgaat |
2911 |
Q |
| |
|
||||||||||||||||||||||||||| | |||||||||||| || ||| |||||||||||||| || ||||| |||||||||||| ||||||||||| |
|
|
| T |
43082775 |
ttgtgtttattccttggtgtgatgtttaagcttttgctggggcatgtctct-atgttttaggcaatatcgttgccaagaatgtcaggatcatttttgaat |
43082677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 551; E-Value: 0
Query Start/End: Original strand, 1076 - 2473
Target Start/End: Original strand, 38137468 - 38138858
Alignment:
| Q |
1076 |
aatgggtaaggaaaaggttcacattaacattgttgtcattggccatgtcgactctgggaagtcaactaccactggtcacttgatctacaagcttggaggt |
1175 |
Q |
| |
|
||||| |||||| || ||||| |||||| |||| || ||||| ||||| |||||||||||||||||||| ||||||| ||||||||||| ||||||||| |
|
|
| T |
38137468 |
aatggttaaggataaagttcatattaacgttgtggttattggtcatgttgactctgggaagtcaactactgctggtcatttgatctacaaacttggaggt |
38137567 |
T |
|
| Q |
1176 |
attgacaagcgtgtgattgagaggtttgagaaagaagctgctgagatgaacaagcgttcattcaagtatgcttgggttcttgacaagctcaaggctgagc |
1275 |
Q |
| |
|
||||| ||| ||| |||||||| |||||||||||||| ||||||| ||||||| || ||||||||||||||||| || |||||||||||||| |||| |
|
|
| T |
38137568 |
attgaaaaggatgtcattgagagacttgagaaagaagctactgagataaacaagccatcgttcaagtatgcttgggtgctcgacaagctcaaggccgagc |
38137667 |
T |
|
| Q |
1276 |
gtgaaagaggtatcacaattgacattgctctgtggaagtttgagaccactaagtactactgcactgtcattgatgcccctggacacagggatttcattaa |
1375 |
Q |
| |
|
|||||||||||||||| ||||||||| |||||| ||||||||||| || ||||||||||||||| ||||||||||||| |||||||||||||||||||| |
|
|
| T |
38137668 |
gtgaaagaggtatcactattgacatttctctgtcaaagtttgagactaccaagtactactgcactctcattgatgcccccggacacagggatttcattaa |
38137767 |
T |
|
| Q |
1376 |
gaacatgattactggtacatcccaagctgattgtgctgttctcatcattgattccaccactggtggttttgaagctggtatttccaaggatggtcagact |
1475 |
Q |
| |
|
|||||||||||| || || ||||||||||| |||||||||||| ||||||||||||| |||||| |||||||||||||| ||| |||| |||||||| |
|
|
| T |
38137768 |
gaacatgattaccgggacgtcccaagctgactgtgctgttctcgtcattgattccacaactggtagttttgaagctggttattctcaggaaggtcagacc |
38137867 |
T |
|
| Q |
1476 |
cgtgaacatgctctccttgctttcactcttggtgtgaggcaaatgatctgctgctgcaacaaggtatttgaactgtaaattttttgattcccctttgtag |
1575 |
Q |
| |
|
|||||||||||| ||||| ||| |||||||||| | |||||||||||||||||||||||||||||| || |||| || || |||| || |
|
|
| T |
38137868 |
tctgaacatgctcttcttgcattcgttcttggtgtgcgccaaatgatctgctgctgcaacaaggtattt---------atattttcat-cctgtttgaag |
38137957 |
T |
|
| Q |
1576 |
ttgcatttggatatttttataatttgcttatacaagtactgattttttgctatcttga---acagatggacgccactactcccaagtactccaagagcag |
1672 |
Q |
| |
|
||| |||| | |||||||| || || || ||||||| ||| | |||||||| | ||||||||| |||||||| ||||| ||||||||| || |
|
|
| T |
38137958 |
ttgtatttcattgtttttatatttcatttgtataagtactaattgtgtgctatctatattgacagatggatgccactacacccaaatactccaaggatag |
38138057 |
T |
|
| Q |
1673 |
gtatgatgaaattgtgaaggaagtatcatcctacatgaagaaggttggctataacccagataaaattccatttgttcccatctctggttttgagggagat |
1772 |
Q |
| |
|
|||||| ||||||||||||||| | ||| ||| ||| | ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38138058 |
gtatgaagaaattgtgaaggaattttcaccctttttgattgatgttggctataacctagatgaaattccatttgttcccatctctggttttgagggagat |
38138157 |
T |
|
| Q |
1773 |
aacatgattgagcgctctacaaatcttgactggtacaagggtccaacacttcttgaggctcttgatcaaatcaatgagcctaagaggccatcagacaagc |
1872 |
Q |
| |
|
||||| ||||| |||||||| || ||||||||||| |||||||| || |||||||| |||||||| |||||||| ||||||||||||| || |||||||| |
|
|
| T |
38138158 |
aacatcattgaacgctctactaaccttgactggtataagggtcccacccttcttgaagctcttgaccaaatcaaggagcctaagaggctattagacaagc |
38138257 |
T |
|
| Q |
1873 |
ccctccgactacctcttcaggatgtctacaagattggaggaattggaactgttcctgtgggacgtgttgagactggtaccatgaaacctggaatggtggt |
1972 |
Q |
| |
|
| |||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||| | ||||||| ||||||| ||| |
|
|
| T |
38138258 |
ctctccgattaccacttcaggatgtctacaagattggaggaattggaactgtgcctgtgggacgggttgagagcggtgtcttgaaaccaggaatggcggt |
38138357 |
T |
|
| Q |
1973 |
gacttttgctccaactggactgcaaactgaagtcaagtctgtggagatgcatcatgaatctctcactgaggcacttcccggtgacaatgtgggatttaat |
2072 |
Q |
| |
|
||||||||| |||||||| ||| ||||| || || ||| |||||||||| |||||| |||| |||||| ||||| ||||||| ||||||||||||| |
|
|
| T |
38138358 |
gacttttgccccaactgggctgaaaactcttgtgaattctatggagatgcaccatgaaaagctcaatgaggcccttcctggtgacattgtgggatttaat |
38138457 |
T |
|
| Q |
2073 |
gttaagaatgtttctgtcaaggatctcaagcgtggttatgttgcctcaaacaccaaggatgacccagccaaggaggctgctaacttcacatctcaggtga |
2172 |
Q |
| |
|
||| || ||| ||||| ||||||||| ||| || |||||||||||| || ||||| |||||||||||| |||||||||||| || ||||| | || | |
|
|
| T |
38138458 |
gttcagcatgggtctgttaaggatctccggcgaggctatgttgcctcagactccaagcatgacccagccacggaggctgctaaatttacatcccgtgtta |
38138557 |
T |
|
| Q |
2173 |
ttatcatgaatcaccctggccagattggaaatggttatgcccctgttcttgactgccacacctcccacattgcagtcaagtttgctgagcttgttactaa |
2272 |
Q |
| |
|
| |||| |||||| |||||| |||| |||||| ||| | ||| |||| |||||||||||||||||| || | |||||||||||| |||||||||| || |
|
|
| T |
38138558 |
tcatcacgaatcaaactggccggattcaaaatggctatacacctattctggactgccacacctcccacgttcctgtcaagtttgctaagcttgttaccaa |
38138657 |
T |
|
| Q |
2273 |
gattgacaggcgttctggtaaggagatcgagaaggagcctaaattcctgaagaatggagatgctggtattattaagatgattcccaccaagcccatggtg |
2372 |
Q |
| |
|
| |||||||| ||||||| ||| |||||||||||||| |||||| |||||||||| ||||||||| || |||||||||||||||||||| |||||||| |
|
|
| T |
38138658 |
gtttgacaggttttctggtttggaaatcgagaaggagcccaaattcttgaagaatggtgatgctggtgttgttaagatgattcccaccaagtccatggtg |
38138757 |
T |
|
| Q |
2373 |
gttgagactttctctgaatatcctccacttggccgttttgctgtcagagatatgcggcaaactgtggctgttggggttatcaagggtgtggagaagaagg |
2472 |
Q |
| |
|
|| ||| ||| ||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||| || |||| ||||||||| |
|
|
| T |
38138758 |
gtagaggatttttctacttatcctccacttggccgttttgctgtcagagacatgcgtcaaactgtggctgttggagtcatcatggttgtgaagaagaagg |
38138857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 1048 - 1544
Target Start/End: Complemental strand, 43046153 - 43045656
Alignment:
| Q |
1048 |
ctttttgtggttttaaacttttaaggac-aatgggtaaggaaaaggttcacattaacattgttgtcattggccatgtcgactctgggaagtcaactacca |
1146 |
Q |
| |
|
|||||||||||||| | |||||||| || ||||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| |||| |
|
|
| T |
43046153 |
ctttttgtggttttcagcttttaagaactaatgggtaaagaaaaggttcacatcaacattgtggtcattggccatgtcgactctgggaaatcaaccacca |
43046054 |
T |
|
| Q |
1147 |
ctggtcacttgatctacaagcttggaggtattgacaagcgtgtgattgagaggtttgagaaagaagctgctgagatgaacaagcgttcattcaagtatgc |
1246 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43046053 |
ctggtcacttgatctacaagcttggaggtattgacaagcgtgtcattgagaggtttgagaaagaagctgctgagatgaacaagcgttcattcaagtatgc |
43045954 |
T |
|
| Q |
1247 |
ttgggttcttgacaagctcaaggctgagcgtgaaagaggtatcacaattgacattgctctgtggaagtttgagaccactaagtactactgcactgtcatt |
1346 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||| || |||||||||||||||||||| |
|
|
| T |
43045953 |
ctgggtccttgacaagctcaaggctgaacgtgaaagaggtatcaccattgacattgctctctggaagtttgagacaaccaagtactactgcactgtcatc |
43045854 |
T |
|
| Q |
1347 |
gatgcccctggacacagggatttcattaagaacatgattactggtacatcccaagctgattgtgctgttctcatcattgattccaccactggtggttttg |
1446 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
43045853 |
gatgcccccggacacagggatttcattaagaacatgatcaccggaacatcccaagctgattgtgccgttctcatcattgattccactactggtggttttg |
43045754 |
T |
|
| Q |
1447 |
aagctggtatttccaaggatggtcagactcgtgaacatgctctccttgctttcactcttggtgtgaggcaaatgatctgctgctgcaacaaggtattt |
1544 |
Q |
| |
|
|||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
43045753 |
aagccggtatttctaaggatggtcagacccgtgaacatgctctccttgctttcactcttggtgtgaagcaaatgatctgctgttgcaacaaggtattt |
43045656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 373; E-Value: 0
Query Start/End: Original strand, 1049 - 1544
Target Start/End: Original strand, 43066255 - 43066751
Alignment:
| Q |
1049 |
tttttgtggttttaaacttttaaggacaa-tgggtaaggaaaaggttcacattaacattgttgtcattggccatgtcgactctgggaagtcaactaccac |
1147 |
Q |
| |
|
|||||||| |||||| |||||||| ||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
43066255 |
tttttgtgcttttaagcttttaagtccaaatgggtaaggaaaaggttcacatcaacatcgttgtcattggccatgtcgactctggcaagtcaaccaccac |
43066354 |
T |
|
| Q |
1148 |
tggtcacttgatctacaagcttggaggtattgacaagcgtgtgattgagaggtttgagaaagaagctgctgagatgaacaagcgttcattcaagtatgct |
1247 |
Q |
| |
|
||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43066355 |
tggtcacttaatctacaaacttggaggtattgacaagcgtgtcattgagaggtttgagaaagaagctgctgagatgaacaagcgttcattcaagtatgcc |
43066454 |
T |
|
| Q |
1248 |
tgggttcttgacaagctcaaggctgagcgtgaaagaggtatcacaattgacattgctctgtggaagtttgagaccactaagtactactgcactgtcattg |
1347 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||| || |||||||||||||||||||| | |
|
|
| T |
43066455 |
tgggttcttgacaagctcaaggctgaacgtgaaagaggtatcaccattgacattgctctctggaagtttgagacaaccaagtactactgcactgtcatcg |
43066554 |
T |
|
| Q |
1348 |
atgcccctggacacagggatttcattaagaacatgattactggtacatcccaagctgattgtgctgttctcatcattgattccaccactggtggttttga |
1447 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |
|
|
| T |
43066555 |
atgcccccggacacagggatttcattaagaacatgatcaccggaacatcccaagctgattgtgccgttctcatcattgattccactactggtggttttga |
43066654 |
T |
|
| Q |
1448 |
agctggtatttccaaggatggtcagactcgtgaacatgctctccttgctttcactcttggtgtgaggcaaatgatctgctgctgcaacaaggtattt |
1544 |
Q |
| |
|
||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
43066655 |
agccggtatttctaaggatggtcagacccgtgaacatgctctccttgctttcactcttggtgtgaagcaaatgatctgctgttgcaacaaggtattt |
43066751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 1051 - 1544
Target Start/End: Complemental strand, 43084578 - 43084084
Alignment:
| Q |
1051 |
tttgtggttttaaacttttaaggac-aatgggtaaggaaaaggttcacattaacattgttgtcattggccatgtcgactctgggaagtcaactaccactg |
1149 |
Q |
| |
|
|||||| |||| | ||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| ||||| || |||| |
|
|
| T |
43084578 |
tttgtgtttttcagcttttaaggactaatgggtaaggaaaaggttcacatcaacattgtggtcattggccatgttgactctgggaaatcaaccacaactg |
43084479 |
T |
|
| Q |
1150 |
gtcacttgatctacaagcttggaggtattgacaagcgtgtgattgagaggtttgagaaagaagctgctgagatgaacaagcgttcattcaagtatgcttg |
1249 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
43084478 |
gtcacttgatctacaagcttggaggtattgacaagcgtgtcatagagaggtttgagaaagaagctgctgagatgaacaagcgttcattcaagtatgcctg |
43084379 |
T |
|
| Q |
1250 |
ggttcttgacaagctcaaggctgagcgtgaaagaggtatcacaattgacattgctctgtggaagtttgagaccactaagtactactgcactgtcattgat |
1349 |
Q |
| |
|
||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||| || |||||||||||||||||||| ||| |
|
|
| T |
43084378 |
ggtccttgacaagctcaaggctgaacgtgaaagaggtatcaccattgacattgctctctggaagtttgagacaaccaagtactactgcactgtcatcgat |
43084279 |
T |
|
| Q |
1350 |
gcccctggacacagggatttcattaagaacatgattactggtacatcccaagctgattgtgctgttctcatcattgattccaccactggtggttttgaag |
1449 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
43084278 |
gcccccggacacagggatttcattaagaacatgatcaccggaacatcccaagctgattgtgccgttctcatcattgattccactactggtggttttgaag |
43084179 |
T |
|
| Q |
1450 |
ctggtatttccaaggatggtcagactcgtgaacatgctctccttgctttcactcttggtgtgaggcaaatgatctgctgctgcaacaaggtattt |
1544 |
Q |
| |
|
| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
43084178 |
ccggtatttctaaggatggtcagacccgtgaacatgctctccttgctttcactcttggtgtgaagcaaatgatctgctgttgcaacaaggtattt |
43084084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 1737 - 2911
Target Start/End: Original strand, 45983958 - 45985141
Alignment:
| Q |
1737 |
attccatttgttcccatctctggttttgagggagataacatgattgagcgctctacaaatcttgactggtacaagggtccaacacttcttgaggctcttg |
1836 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||| |||||||| ||| ||| |
|
|
| T |
45983958 |
attccaattgttcccatctctggttttgagggagataacttgattgagcgctctactaatcttgattggtacaagggtccaacccttcttgaagctattg |
45984057 |
T |
|
| Q |
1837 |
atcaaatcaatgagcctaagaggccatcagacaagcccctccgactacctcttcaggatgtctacaagattggaggaattggaactgttcctgtgggacg |
1936 |
Q |
| |
|
| |||||||| ||||||| |||||||||||||||||| ||| || |||| ||||||||||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
45984058 |
accaaatcaacgagcctatgaggccatcagacaagcctctcagaataccacttcaggatgtctacaagattggaggaatcggaactgtgcctgtgggacg |
45984157 |
T |
|
| Q |
1937 |
tgttgagactggtaccatgaaacctggaatggtggtgacttttgctccaactggactgcaaactgaagtcaagtctgtggagatgcatcatgaatctctc |
2036 |
Q |
| |
|
||||||||||||| || |||| |||||||||||| |||||||||| ||||||| |||||| ||||||| ||||||||||||||||| |||||| || || |
|
|
| T |
45984158 |
tgttgagactggttccttgaaccctggaatggtgctgacttttgccgcaactgggctgcaagctgaagtgaagtctgtggagatgcaccatgaagctatc |
45984257 |
T |
|
| Q |
2037 |
actgaggcacttcccggtgacaatgtgggatttaatgttaagaatgtttctgtcaaggatctcaagcgtggttatgttgcctcaaacaccaaggatgacc |
2136 |
Q |
| |
|
|||||| ||||| ||||||| |||||||||||||||| || ||| ||| | ||||||||||| |||||||||||||||||| || ||| ||||| |
|
|
| T |
45984258 |
ggtgaggcccttcctggtgacattgtgggatttaatgtt---aacgttgctgctagggatctcaagcaaggttatgttgcctcaaactccgagggtgacc |
45984354 |
T |
|
| Q |
2137 |
cagccaaggaggctgctaacttcacatctcaggtgattatcatgaatcaccctggccagattggaaatggttatgcccctgttcttgactgccacacctc |
2236 |
Q |
| |
|
|||| ||||| ||| |||| ||||||| || || || | ||||||||||||||||||| ||||||| || | ||||||||||||||||||||||| |
|
|
| T |
45984355 |
cagcggtagaggccgctcactttacatctcttgttatcattacgaatcaccctggccagattcgaaatggctacacacctgttcttgactgccacacctc |
45984454 |
T |
|
| Q |
2237 |
ccacattgcagtcaagtttgctgagcttgttactaagattgacaggcgttctggtaaggagatcgagaaggagcctaaattcctgaagaatggagatgct |
2336 |
Q |
| |
|
||||||||| |||||||||||||||||| || | ||| |||||||| |||||||| |||| || |||| |||||| ||||| ||| || ||| ||| || |
|
|
| T |
45984455 |
ccacattgctgtcaagtttgctgagcttatttccaaggttgacaggtgttctggtgaggaaattgagagggagcccaaatttttgatgagtggtgatact |
45984554 |
T |
|
| Q |
2337 |
ggtattattaagatgattcccaccaagcccatggtggttgagactttctctgaatatcctccacttggccgttttgctgtcagagatatgcggcaaactg |
2436 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| ||| |||||||| |||||||||||| |||||||||| ||||||||| || ||||||| |
|
|
| T |
45984555 |
ggtattattaagatgattcccaccaagcctatggtggtagagcctttctctctatatcctccactcggccgttttgttgtcagagactggcatcaaactg |
45984654 |
T |
|
| Q |
2437 |
tggctgttggggttatcaagggtgtggagaagaaggaacctg--gca-cagctaagataactaagtcagcagccaagaagaaatgaaccgtgcaggatga |
2533 |
Q |
| |
|
|||||||||| || ||||||| |||| |||||||||| |||| ||| || ||| || |||||||| | ||| |||||||| ||||| ||||| |
|
|
| T |
45984655 |
tggctgttggagtcatcaaggctgtgaagaagaaggatcctgctgcaggaggtaaaatcactaagtcgata---ttgaaaaaatgaactgtgcaagatga |
45984751 |
T |
|
| Q |
2534 |
ttttccttgggaagtttatagtcgttattacaataaatggtttgtggttcttagtatttctatttcgtgtcttgttaagttgttttttggattaagtgtg |
2633 |
Q |
| |
|
| | || | ||| | ||| || |||||||| |||||| || | |||| ||||||||||||||||| ||| || || ||||||| ||||||||||| |
|
|
| T |
45984752 |
tctatctagcgaaatctatcgttgttattaccataaatagtctttggtccttagtatttctatttctcctctagtaaacttgttttgcagattaagtgtg |
45984851 |
T |
|
| Q |
2634 |
aagtctgcaccgtcatctcccagctt----ttgttcccagaactgggttctagatcgacggtggcatgactagttatttttcttg-tttctgctttaatt |
2728 |
Q |
| |
|
||||||||||| | || || ||| || || ||||||||| |||||||||||| | ||||| || ||| ||||||| | | ||| || | |||| |
|
|
| T |
45984852 |
aagtctgcaccattatatcacagttttttcttcttcccagaattgggttctagataaatggtggaatagctatttattttgttcgttttatgttctaat- |
45984950 |
T |
|
| Q |
2729 |
gtcttgtcttgtgtgaacacctgaattttacaagcagcaagtttccggacctgctga-tttgtttttaatatcaactctatatctgcgtgttt----att |
2823 |
Q |
| |
|
| ||||| |||||||||| || ||||| | |||||| |||||| ||||||||||| |||||||| |||||||||||| ||| || |||||| ||| |
|
|
| T |
45984951 |
-tagtgtctagtgtgaacacttggattttgctagcagcgagtttctggacctgctgattttgttttgaatatcaactctttatttgtgtgtttattgatt |
45985049 |
T |
|
| Q |
2824 |
ccttggtgtgatgttt--aatctttgctggggcaagtgtctga-tgttttaggcaatttcatt-gcccagaatgtcaggagcatttttgaat |
2911 |
Q |
| |
|
|||||||||||| ||| | | |||||||| || || ||||| |||| |||||||| | || ||| |||||||||||||||||||||||| |
|
|
| T |
45985050 |
ccttggtgtgatattttaagtttttgctggatcatgtctctgattgttctaggcaatatagttggccgagaatgtcaggagcatttttgaat |
45985141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 1714 - 2478
Target Start/End: Original strand, 7891191 - 7891955
Alignment:
| Q |
1714 |
aggttggctataacccagataaaattccatttgttcccatctctggttttgagggagataacatgattgagcgctctacaaatcttgactggtacaaggg |
1813 |
Q |
| |
|
||||||||||||||| || ||||||||| ||| | || |||||||||| |||||||||||||| |||||||||||| | || ||||| ||||||| ||| |
|
|
| T |
7891191 |
aggttggctataacctaggtaaaattccttttatccctatctctggttacgagggagataacatcattgagcgctcttctaaccttgattggtacacggg |
7891290 |
T |
|
| Q |
1814 |
tccaacacttcttgaggctcttgatcaaatcaatgagcctaagaggccatcagacaagcccctccgactacctcttcaggatgtctacaagattggagga |
1913 |
Q |
| |
|
||| || |||||||| |||||||| ||| ||| |||||||||| | | || ||| |||||| |||| ||||| ||||||||||||||||||||| |
|
|
| T |
7891291 |
tcccacccttcttgaagctcttgaccaattcagaaggcctaagaggttaatattcaggcctctccgattaccacttcaagatgtctacaagattggagga |
7891390 |
T |
|
| Q |
1914 |
attggaactgttcctgtgggacgtgttgagactggtaccatgaaacctggaatggtggtgacttttgctccaactggactgcaaactgaagtcaagtctg |
2013 |
Q |
| |
|
||||||| ||| ||||||||||| |||||| |||||| | ||||||||||||||||| |||||||||| |||||||| || ||||||||||| ||||||| |
|
|
| T |
7891391 |
attggaattgtgcctgtgggacgcgttgagtctggtatcttgaaacctggaatggtgctgacttttgccccaactgggctccaaactgaagtgaagtctg |
7891490 |
T |
|
| Q |
2014 |
tggagatgcatcatgaatctctcactgaggcacttcccggtgacaatgtgggatttaatgttaagaatgtttctgtcaaggatctcaagcgtggttatgt |
2113 |
Q |
| |
|
|||||||||| |||||| |||||||| ||| ||||| ||||||| |||||||||||| |||| |||||| |||| |||||||||| ||| || ||||| |
|
|
| T |
7891491 |
tggagatgcaccatgaagctctcactcgggctcttcctggtgacattgtgggatttaacgttacgaatgtgtctgctaaggatctcaggcgaggctatgt |
7891590 |
T |
|
| Q |
2114 |
tgcctcaaacaccaaggatgacccagccaaggaggctgctaacttcacatctcaggtgattatcatgaatcaccctggccagattggaaatggttatgcc |
2213 |
Q |
| |
|
|||||||||| ||||| || |||||| | |||||||||| | || |||||||| || || ||| ||||||| |||||||||||| ||||||| ||| | |
|
|
| T |
7891591 |
tgcctcaaactccaagcgtggcccagctatggaggctgctgaatttacatctcatgttatcatcttgaatcatcctggccagattagaaatggctataca |
7891690 |
T |
|
| Q |
2214 |
cctgttcttgactgccacacctcccacattgcagtcaagtttgctgagcttgttactaagattgacaggcgttctggtaaggagatcgagaaggagccta |
2313 |
Q |
| |
|
||| |||| ||||||||||||||||||||||| ||||||||||| ||||||||| ||| |||||||| | || | || | ||||||||||| | |
|
|
| T |
7891691 |
cctattctcgactgccacacctcccacattgctgtcaagtttgccaagcttgttagcaagtttgacaggaatactaatgttgaatttgagaaggagccca |
7891790 |
T |
|
| Q |
2314 |
aattcctgaagaatggagatgctggtattattaagatgattcccaccaagcccatggtggttgagactttctctgaatatcctccacttggccgttttgc |
2413 |
Q |
| |
|
||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||| ||||||| |||||||| |
|
|
| T |
7891791 |
aattcttgaagaatggcgatgctggtattattaagatgattcccaccaagcccatggtggtagagacttttactgcatatccttcacttggtcgttttgc |
7891890 |
T |
|
| Q |
2414 |
tgtcagagatatgcggcaaactgtggctgttggggttatcaagggtgtggagaagaaggaacctg |
2478 |
Q |
| |
|
||||||||| ||||| |||||||||||| |||| || ||||||| |||| |||| ||||| |||| |
|
|
| T |
7891891 |
tgtcagagacatgcgtcaaactgtggctattggagtcatcaaggatgtgaagaataaggatcctg |
7891955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 291; E-Value: 1e-162
Query Start/End: Original strand, 1020 - 1544
Target Start/End: Original strand, 45993045 - 45993568
Alignment:
| Q |
1020 |
tgttgttttctttgttgaatttgcagaactttttgtggttttaaacttttaaggac-aatgggtaaggaaaaggttcacattaacattgttgtcattggc |
1118 |
Q |
| |
|
||||||||||| ||||||||| ||||| ||||||||| ||| || ||||||||| ||||| |||||||||||||| |||| |||||| || ||||| |
|
|
| T |
45993045 |
tgttgttttctgtgttgaattcgcagatctttttgtgatttcaag--tttaaggactaatggataaggaaaaggttcctattagcattgtggttattggt |
45993142 |
T |
|
| Q |
1119 |
catgtcgactctgggaagtcaactaccactggtcacttgatctacaagcttggaggtattgacaagcgtgtgattgagaggtttgagaaagaagctgctg |
1218 |
Q |
| |
|
||||||||||| ||||||||||| || |||||||| || ||| |||| |||||| ||||| ||||| |||| || ||||| |||||||||||||||||| |
|
|
| T |
45993143 |
catgtcgactccgggaagtcaaccactactggtcatttcatccacaaacttggatgtattcacaagagtgtcatcgagagtcttgagaaagaagctgctg |
45993242 |
T |
|
| Q |
1219 |
agatgaacaagcgttcattcaagtatgcttgggttcttgacaagctcaaggctgagcgtgaaagaggtatcacaattgacattgctctgtggaagtttga |
1318 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| | || ||| ||||||||| |
|
|
| T |
45993243 |
agatgatcaagcgttcattcaagtatgcttgggtgcttgacaagctcaagactgagcgtgaaagaggtatcacaattgacagttctttgtcgaagtttga |
45993342 |
T |
|
| Q |
1319 |
gaccactaagtactactgcactgtcattgatgcccctggacacagggatttcattaagaacatgattactggtacatcccaagctgattgtgctgttctc |
1418 |
Q |
| |
|
||| | |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||| || || || |||||||||||||||||||||||| |
|
|
| T |
45993343 |
gacaaacaagtacagctgcactgtcattgatgcctccggacacagggatttcattaagaacatgatcaccgggacgtcccaagctgattgtgctgttctc |
45993442 |
T |
|
| Q |
1419 |
atcattgattccaccactggtggttttgaagctggtatttccaaggatggtcagactcgtgaacatgctctccttgctttcactcttggtgtgaggcaaa |
1518 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||| |
|
|
| T |
45993443 |
atcattgattccactactcgtggttttgaagccggtatttcaaaggatggtcagactcgtgaacatgctcttcttgccttcactcttggtgtgaatcaaa |
45993542 |
T |
|
| Q |
1519 |
tgatctgctgctgcaacaaggtattt |
1544 |
Q |
| |
|
||||||| |||||||||||||||||| |
|
|
| T |
45993543 |
tgatctgttgctgcaacaaggtattt |
45993568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 262; E-Value: 1e-145
Query Start/End: Original strand, 1026 - 1544
Target Start/End: Original strand, 45983271 - 45983782
Alignment:
| Q |
1026 |
tttctttgttgaatttgcagaactttttgtggttttaaacttttaaggac-aatgggtaaggaaaaggttcacattaacattgttgtcattggccatgtc |
1124 |
Q |
| |
|
||||| ||||||||| ||||| |||||||| ||| || ||||||||| ||||| |||| ||||||||| ||||||||||| || ||||| ||||| |
|
|
| T |
45983271 |
tttctgtgttgaattggcagatatttttgtgatttcaag--tttaaggactaatggctaagaaaaaggttcgtattaacattgtggttattggtcatgtg |
45983368 |
T |
|
| Q |
1125 |
gactctgggaagtcaactaccactggtcacttgatctacaagcttggaggtattgacaagcgtgtgattgagaggtttgagaaagaagctgctgagatga |
1224 |
Q |
| |
|
||||| ||||||||||| || |||||||| |||||| |||| |||||| ||||| ||||| |||| |||||||| ||||||||||||||||| |||||| |
|
|
| T |
45983369 |
gactccgggaagtcaaccactactggtcatttgatccacaaacttggatgtattcacaagagtgtcattgagagtcttgagaaagaagctgctaagatga |
45983468 |
T |
|
| Q |
1225 |
acaagcgttcattcaagtatgcttgggttcttgacaagctcaaggctgagcgtgaaagaggtatcacaattgacattgctctgtggaagtttgagaccac |
1324 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| | |||||||||||| | |||| |||||||||||| | |
|
|
| T |
45983469 |
acaagcgttcattcaagtatgcttgggtgcttgacaagctcaaggctgaacgtgaaagaggtgttacaattgacattaccctgtcgaagtttgagacaaa |
45983568 |
T |
|
| Q |
1325 |
taagtactactgcactgtcattgatgcccctggacacagggatttcattaagaacatgattactggtacatcccaagctgattgtgctgttctcatcatt |
1424 |
Q |
| |
|
|||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| || || || ||||||||||| |||||||||||| ||||| |
|
|
| T |
45983569 |
caagtacaactgcactgtcattgatgcccccggacacagggatttcattaagaacatgatcaccggaacgtcccaagctgactgtgctgttctcgtcatt |
45983668 |
T |
|
| Q |
1425 |
gattccaccactggtggttttgaagctggtatttccaaggatggtcagactcgtgaacatgctctccttgctttcactcttggtgtgaggcaaatgatct |
1524 |
Q |
| |
|
|||||||| ||||||||||||||||| ||||| | |||||||||| |||||||||||||| ||||| |||||||||||||||| |||||||||| |
|
|
| T |
45983669 |
gattccactactggtggttttgaagccggtat------gaatggtcagacccgtgaacatgctcttcttgccttcactcttggtgtgaatcaaatgatct |
45983762 |
T |
|
| Q |
1525 |
gctgctgcaacaaggtattt |
1544 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
45983763 |
gctgctgcaacaaggtattt |
45983782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 2046 - 2473
Target Start/End: Original strand, 43077159 - 43077586
Alignment:
| Q |
2046 |
cttcccggtgacaatgtgggatttaatgttaagaatgtttctgtcaaggatctcaagcgtggttatgttgcctcaaacaccaaggatgacccagccaagg |
2145 |
Q |
| |
|
|||||||| ||| |||| ||||||||||| |||| ||| ||| |||||||||||| |||| ||||||||||| ||| ||| ||||||||||||||||| |
|
|
| T |
43077159 |
cttcccggcgactgtgtgagatttaatgttgagaacgttgatgttaaggatctcaagagtggctatgttgcctctaactccatggatgacccagccaagg |
43077258 |
T |
|
| Q |
2146 |
aggctgctaacttcacatctcaggtgattatcatgaatcaccctggccagattggaaatggttatgcccctgttcttgactgccacacctcccacattgc |
2245 |
Q |
| |
|
|||| |||||||| |||||||| || | ||||||||||||||||| |||||| |||||| ||||| ||||||||| |||||||||||| ||||||| |
|
|
| T |
43077259 |
aggccgctaactttacatctcaagtcgtcgtcatgaatcaccctggcaagattgaaaatggctatgcacctgttcttcactgccacaccttccacattct |
43077358 |
T |
|
| Q |
2246 |
agtcaagtttgctgagcttgttactaagattgacaggcgttctggtaaggagatcgagaaggagcctaaattcctgaagaatggagatgctggtattatt |
2345 |
Q |
| |
|
|||||||||| |||||||||||| |||||||| ||||||||||||| || ||| |||| | |||| |||||||||| |||||| ||||||||||||||| |
|
|
| T |
43077359 |
tgtcaagtttgatgagcttgttaccaagattgataggcgttctggtatggtgattgagacgaagcccaaattcctgatgaatggtgatgctggtattatt |
43077458 |
T |
|
| Q |
2346 |
aagatgattcccaccaagcccatggtggttgagactttctctgaatatcctccacttggccgttttgctgtcagagatatgcggcaaactgtggctgttg |
2445 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| || | ||| |||||||||||||||| |
|
|
| T |
43077459 |
aagatgattcccaccaagcccatggtggttgagactttctctgaatatcctccacttggccgttttactatcagggacaagcgtcaaactgtggctgttg |
43077558 |
T |
|
| Q |
2446 |
gggttatcaagggtgtggagaagaagga |
2473 |
Q |
| |
|
| || |||| || ||||||| ||||||| |
|
|
| T |
43077559 |
gtgtcatcacggctgtggagtagaagga |
43077586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 206; E-Value: 1e-111
Query Start/End: Original strand, 1113 - 1538
Target Start/End: Original strand, 7890689 - 7891114
Alignment:
| Q |
1113 |
attggccatgtcgactctgggaagtcaactaccactggtcacttgatctacaagcttggaggtattgacaagcgtgtgattgagaggtttgagaaagaag |
1212 |
Q |
| |
|
||||| ||||||||||| ||||||||||| || ||||||| |||||||||||||||||||||||||| ||| ||| || || || ||||||||||||| |
|
|
| T |
7890689 |
attggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaaggatgtcatcgatagatttgagaaagaag |
7890788 |
T |
|
| Q |
1213 |
ctgctgagatgaacaagcgttcattcaagtatgcttgggttcttgacaagctcaaggctgagcgtgaaagaggtatcacaattgacattgctctgtggaa |
1312 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
7890789 |
ctgctgagatgaacaggcattcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagaggtatcacaattgacatttctctgtggaa |
7890888 |
T |
|
| Q |
1313 |
gtttgagaccactaagtactactgcactgtcattgatgcccctggacacagggatttcattaagaacatgattactggtacatcccaagctgattgtgct |
1412 |
Q |
| |
|
||||||||| || || | | ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| ||||||| |||||| |
|
|
| T |
7890889 |
gtttgagacaaccaacttccgctgcactctcattgatgcccctggacacagggatttcattaagaacatgatcactggagcgtccgaagctgactgtgct |
7890988 |
T |
|
| Q |
1413 |
gttctcatcattgattccaccactggtggttttgaagctggtatttccaaggatggtcagactcgtgaacatgctctccttgctttcactcttggtgtga |
1512 |
Q |
| |
|
||||| ||||||||||| || |||||||||||| |||||| ||| ||| |||||||||| |||||||| || ||||| ||| |||||||||| |
|
|
| T |
7890989 |
gttcttatcattgattctacacttggtggttttgacgctggtttttgtaagaatggtcagaccactgaacatgttcaacttgcattcgctcttggtgttt |
7891088 |
T |
|
| Q |
1513 |
ggcaaatgatctgctgctgcaacaag |
1538 |
Q |
| |
|
|||||||||||||| || |||||| |
|
|
| T |
7891089 |
cacaaatgatctgctgttgtaacaag |
7891114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 190; E-Value: 1e-102
Query Start/End: Original strand, 1113 - 1538
Target Start/End: Original strand, 7888424 - 7888849
Alignment:
| Q |
1113 |
attggccatgtcgactctgggaagtcaactaccactggtcacttgatctacaagcttggaggtattgacaagcgtgtgattgagaggtttgagaaagaag |
1212 |
Q |
| |
|
||||| ||||| || || ||||||||||| || ||||||| |||||||||||||||||||||||||| ||| ||| || |||| |||||||||||| |
|
|
| T |
7888424 |
attggtcatgttgattccgggaagtcaaccactgctggtcatttgatctacaagcttggaggtattgaaaaggatgtcatcgagaaacttgagaaagaag |
7888523 |
T |
|
| Q |
1213 |
ctgctgagatgaacaagcgttcattcaagtatgcttgggttcttgacaagctcaaggctgagcgtgaaagaggtatcacaattgacattgctctgtggaa |
1312 |
Q |
| |
|
|||||||||| |||| |||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
7888524 |
ctgctgagataaacagacgtttattcaagtatgcttgggtgcttgacaaactcaaggctgagcgtgaaagaggtatcacaattgacatttctctttggaa |
7888623 |
T |
|
| Q |
1313 |
gtttgagaccactaagtactactgcactgtcattgatgcccctggacacagggatttcattaagaacatgattactggtacatcccaagctgattgtgct |
1412 |
Q |
| |
|
|||| |||| || | |||| ||||||| ||||||||||||| ||||||||||||||||| ||||||||||| || || | || |||||||||||||| |
|
|
| T |
7888624 |
gtttcagacaaccagctactgctgcactctcattgatgcccccggacacagggatttcatcaagaacatgatcaccggggcgtctgaagctgattgtgct |
7888723 |
T |
|
| Q |
1413 |
gttctcatcattgattccaccactggtggttttgaagctggtatttccaaggatggtcagactcgtgaacatgctctccttgctttcactcttggtgtga |
1512 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| ||| ||| |||||||||||||| |||||||| || ||||| ||| |||| ||||| |
|
|
| T |
7888724 |
gttctcatcattgattccacaactggtggttttgaagccggtttttgtaaggatggtcagaccactgaacatgttcaacttgccttcgctctcggtgttt |
7888823 |
T |
|
| Q |
1513 |
ggcaaatgatctgctgctgcaacaag |
1538 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
7888824 |
aaaaaatgatctgctgctgcaacaag |
7888849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 187; E-Value: 1e-100
Query Start/End: Original strand, 1683 - 2022
Target Start/End: Original strand, 43076774 - 43077105
Alignment:
| Q |
1683 |
attgtgaaggaagtatcatcctacatgaagaaggttggctataacccagataaaattccatttgttcccatctctggttttgagggagataacatgattg |
1782 |
Q |
| |
|
|||||| ||||||| |||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
43076774 |
attgtggaggaagtttcatcctatttgaagaaggttggctataacccagaaaacattccatttgttcccatctctggttttgagggagataacatgatcg |
43076873 |
T |
|
| Q |
1783 |
agcgctctacaaatcttgactggtacaagggtccaacacttcttgaggctcttgatcaaatcaatgagcctaagaggccatcagacaagcccctccgact |
1882 |
Q |
| |
|
||||||||||||| ||| ||||||||||||||||||| ||||||| ||| ||||| |||||||| |||||||||||||| |||||||||| ||||||||| |
|
|
| T |
43076874 |
agcgctctacaaaccttaactggtacaagggtccaacccttcttggggcccttgaccaaatcaacgagcctaagaggccttcagacaagcacctccgact |
43076973 |
T |
|
| Q |
1883 |
acctcttcaggatgtctacaagattggaggaattggaactgttcctgtgggacgtgttgagactggtaccatgaaacctggaatggtggtgacttttgct |
1982 |
Q |
| |
|
|| ||||||||||| || |||||||||||||||| ||||||| |||||||||||||||| | |||||||||||||||||||||||||||| |
|
|
| T |
43076974 |
ac--------aatgtctacaagtttagaggaattggaactgtacctgtggcacgtgttgagactggtgtcttgaaacctggaatggtggtgacttttgcc |
43077065 |
T |
|
| Q |
1983 |
ccaactggactgcaaactgaagtcaagtctgtggagatgc |
2022 |
Q |
| |
|
|| ||||||||| | || |||||| |||||||||||||| |
|
|
| T |
43077066 |
cctactggactgacagctaaagtcacgtctgtggagatgc |
43077105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 184; E-Value: 1e-98
Query Start/End: Original strand, 1086 - 1544
Target Start/End: Original strand, 40034318 - 40034768
Alignment:
| Q |
1086 |
gaaaaggttcacattaacattgttgtcattggccatgtcgactctgggaagtcaactaccactggtcacttgatctacaagcttggaggtattgacaagc |
1185 |
Q |
| |
|
||||||||||| |||||||| || | ||||| |||||||||||||||||||||| || |||||| ||||||||||||||||| |||||| | ||| |
|
|
| T |
40034318 |
gaaaaggttcatattaacatcgtatttattggtaatgtcgactctgggaagtcaaccactggtggtcatttgatctacaagcttggcggtattaaaaagg |
40034417 |
T |
|
| Q |
1186 |
gtgtgattgagaggtttgagaaagaagctgctgagatgaacaagcgttcattcaagtatgcttgggttcttgacaagctcaaggctgagcgtgaaagagg |
1285 |
Q |
| |
|
||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
40034418 |
atgtcattgagaaatttgagaaagaagctgctgagatgaacaagcgctcattcaagtatgcttgggtacttgacaagctcaaggctgagcgtgaaagagg |
40034517 |
T |
|
| Q |
1286 |
tatcacaattgacattgctctgtggaagtttgagaccactaagtactactgcactgtcattgatgcccctggacacagggatttcattaagaacatgatt |
1385 |
Q |
| |
|
| | |||||||| ||| | ||| ||||||||||| || || ||| |||||||| ||||||| ||||| ||||||| |||||||| ||||||||| | |
|
|
| T |
40034518 |
tgttacaattgatatttccatgtccaagtttgagacaaccaaataccactgcactctcattgacgcccccggacaca--gatttcatcaagaacatgtta |
40034615 |
T |
|
| Q |
1386 |
actggtacatcccaagctgattgtgctgttctcatcattgattccaccactggtggttttgaagctggtatttccaaggatggtcagactcgtgaacatg |
1485 |
Q |
| |
|
|| || || |||| |||||| ||||||||||||||||||||||||| |||||| ||||||| ||||||| || |||||||||| |||||||| |
|
|
| T |
40034616 |
accggcacgtccctagctgactgtgctgttctcatcattgattccagaactggtagttttgagactggtat---ca---atggtcagaccactgaacatg |
40034709 |
T |
|
| Q |
1486 |
ctctccttgctttcactcttggtgtgaggcaaatgatctgctgctgcaacaaggtattt |
1544 |
Q |
| |
|
|||| ||||| | ||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
40034710 |
ctcttcttgcctatactcttggtgtgaatcaaatgatctgctgctgcaacaaggtattt |
40034768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 171; E-Value: 8e-91
Query Start/End: Original strand, 1086 - 1484
Target Start/End: Complemental strand, 51292282 - 51291885
Alignment:
| Q |
1086 |
gaaaaggttcacattaacattgttgtcattggccatgtcgactctgggaagtcaactaccactggtcacttgatctacaagcttggaggtattgacaagc |
1185 |
Q |
| |
|
|||||||||| ||||||||||| | ||||| |||||||||| ||| ||||||| ||| ||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
51292282 |
gaaaaggttcgtattaacattgtgtttattggtcatgtcgactatggaaagtcaaatactgctggtcatttgatctacaagcttggaggtattgacaaga |
51292183 |
T |
|
| Q |
1186 |
gtgtgattgagaggtttgagaaagaagctgctgagatgaacaagcgttcattcaagtatgcttgggttcttgacaagctcaaggctgagcgtgaaagagg |
1285 |
Q |
| |
|
|| |||||||| |||||||||||||| |||||||||||| ||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
51292182 |
atgacattgagagacttgagaaagaagctactgagatgaacatgcgttcattcacgtatgcttgggtgcttgacaagttcaaggctgagcgtgaaagagg |
51292083 |
T |
|
| Q |
1286 |
tatcacaattgacattgctctgtggaagtttgagaccactaagtactactgcactgtcattgatgcccctggacacagggatttcattaagaacatgatt |
1385 |
Q |
| |
|
|||||||||||||||| |||| | |||||||| || | |||||||| |||||| ||||||||||||| ||||| || ||||||||||||||||||| |
|
|
| T |
51292082 |
tatcacaattgacatttctctatccaagtttga-acaatcaagtactattgcactctcattgatgcccccggacatgggaatttcattaagaacatgatc |
51291984 |
T |
|
| Q |
1386 |
actggtacatcccaagctgattgtgctgttctcatcattgattccaccactggtggttttgaagctggtatttccaaggatggtcagactcgtgaacat |
1484 |
Q |
| |
|
| || | | ||||||||| |||| | |||||||| |||||||||| ||||| || |||||||||||| ||| |||||||||||||| |||||||| |
|
|
| T |
51291983 |
gccgggccgttccaagctgactgtgttattctcatccttgattccacaactggcgggtttgaagctggttattctaaggatggtcagaccggtgaacat |
51291885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 141; E-Value: 6e-73
Query Start/End: Original strand, 1634 - 1981
Target Start/End: Complemental strand, 50912503 - 50912153
Alignment:
| Q |
1634 |
acagatggacgccactactcccaagtactccaagagcaggtatgatgaaattgtgaaggaagtatcatcctacatgaagaaggttggctat---aaccca |
1730 |
Q |
| |
|
||||||||| || ||||||||||| ||||||||| | |||||||| |||||||| ||| | ||| ||| | |||| |||||||||| || | | |
|
|
| T |
50912503 |
acagatggatgctactactcccaaatactccaagggtaggtatgaagaaattgttaagatcctttcaccctttctaaagagggttggctatgataatcta |
50912404 |
T |
|
| Q |
1731 |
gataaaattccatttgttcccatctctggttttgagggagataacatgattgagcgctctacaaatcttgactggtacaagggtccaacacttcttgagg |
1830 |
Q |
| |
|
||| ||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||| ||||| || ||| |||| | |
|
|
| T |
50912403 |
gatgaaattccgtttattcccatctctggttttgagggagataacatcattgagcgctctactaaccttgactggtacaaaggtcccacccttattgaag |
50912304 |
T |
|
| Q |
1831 |
ctcttgatcaaatcaatgagcctaagaggccatcagacaagcccctccgactacctcttcaggatgtctacaagattggaggaattggaactgttcctgt |
1930 |
Q |
| |
|
|||||||||||||||| |||||||| || |||||| ||| ||| |||||| |||| ||||||| ||||||||||||||||| |||||||| ||| ||||| |
|
|
| T |
50912303 |
ctcttgatcaaatcaaggagcctaatagaccatcacacatgcctctccgattaccacttcaggttgtctacaagattggagaaattggaattgtacctgt |
50912204 |
T |
|
| Q |
1931 |
gggacgtgttgagactggtaccatgaaacctggaatggtggtgacttttgc |
1981 |
Q |
| |
|
||||||| ||||||| ||| | |||||| ||||||||||||||||||||| |
|
|
| T |
50912203 |
gggacgtattgagaccggtgtcttgaaacgtggaatggtggtgacttttgc |
50912153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 139; E-Value: 1e-71
Query Start/End: Original strand, 1713 - 2462
Target Start/End: Original strand, 40034931 - 40035683
Alignment:
| Q |
1713 |
aaggttggctataacccagataaaattccatttgttcccatctctggttttgagggagataacatgattgagcgctctacaaatcttgactggtacaagg |
1812 |
Q |
| |
|
|||||||||||||||| | | | ||||||||| ||||||| |||||||||| ||||| ||||| |||||||||||||| || ||||| |||||||| | |
|
|
| T |
40034931 |
aaggttggctataacctatctgacattccatttattcccatatctggttttgttggagaaaacatcattgagcgctctactaaccttgattggtacaaag |
40035030 |
T |
|
| Q |
1813 |
gtccaacacttcttgaggctcttgatcaaatcaatgagcctaagaggccatcagacaagcccctccgactacctcttcaggatgtctacaagattggagg |
1912 |
Q |
| |
|
|||| || ||| |||| ||| | || |||||||| | || |||||||||||||| ||||| |||||| |||| | ||| ||| |||| ||||||||| |
|
|
| T |
40035031 |
gtcccaccctttttgaagctatcgaccaaatcaaagtaccgaagaggccatcagataagcctctccgattaccaatccagtctgtttacatgattggagg |
40035130 |
T |
|
| Q |
1913 |
aattggaactgttcctgtgggacgtgttgagactggtaccatgaaacctggaatggtggtgacttttgctccaactggactgcaaactgaagtcaagtct |
2012 |
Q |
| |
|
||||||| || ||||| || |||||| ||||||| | ||||||| ||||||| ||||||||||| |||||||| ||||||||||||| | |||| |
|
|
| T |
40035131 |
aattggagtcgtgcctgttggtcgtgttatgactggtgtcttgaaaccaggaatggctgtgacttttgccccaactggggtgcaaactgaagtgaggtct |
40035230 |
T |
|
| Q |
2013 |
gtggagatgcatcatgaatctctcactgaggcacttcccggtgacaatgtgggatttaatgttaagaatgtttctgtcaaggatctcaagcgtggttatg |
2112 |
Q |
| |
|
||||||||||| || ||| ||||| ||||| ||||| ||||||| ||||||||||||||||||||| | ||||| ||||||||||||| ||||||| |
|
|
| T |
40035231 |
gtggagatgcaccacgaaggtctcatcgaggcccttcctggtgacattgtgggatttaatgttaagaacatgtctgttaaggatctcaagcaaggttatg |
40035330 |
T |
|
| Q |
2113 |
ttgcctcaaacaccaaggatgacccagccaaggaggctgctaacttcacatctcaggtgattatcatgaatcaccc---tggccagattggaaatggtta |
2209 |
Q |
| |
|
||||||||||| |||| ||||| ||||||| ||| || | ||| || || ||||| | ||| |||| |||||||| ||| | ||| | ||| || |
|
|
| T |
40035331 |
ttgcctcaaactccaacgatgatccagccatggaagccgttaaatttacttctcatattattgtcattaatcaccctgatggaaaaattccacttggcta |
40035430 |
T |
|
| Q |
2210 |
tgcccctgttcttgactgccacacctcccacattgcagtcaagtttgctgagcttgttactaagattgacaggcgttctggtaaggagatcgagaaggag |
2309 |
Q |
| |
|
| | ||| || ||||||||||||||||||||||| | |||| ||| ||| | |||||| ||| |||||||||||| | | | | | ||| ||||| |
|
|
| T |
40035431 |
tacacctattgttgactgccacacctcccacattcctgtcaggttcgctaggtttgttaacaagcttgacaggcgttgtaattttgtgcttgagcaggag |
40035530 |
T |
|
| Q |
2310 |
cctaaattcctgaagaatggagatgctggtattattaagatgattcccaccaagcccatggtggttgagactttctctgaatatcctccacttggccgtt |
2409 |
Q |
| |
|
|| |||||| || ||||||| |||| || || || | |||||||| ||||||||||||||||| ||| || | ||||| || |||||| ||||| |
|
|
| T |
40035531 |
cccaaattcttggagaatggtgatggggggcttgttgaaatgattccaaccaagcccatggtggtagagcctaatgcaaaatattcttcacttgcccgtt |
40035630 |
T |
|
| Q |
2410 |
ttgctgtcagagatatgcggcaaactgtggctgttggggttatcaagggtgtg |
2462 |
Q |
| |
|
|| | |||||||| | ||| | |||||| |||||||| || ||||||| |||| |
|
|
| T |
40035631 |
ttacagtcagagacacgcgtcgaactgtcgctgttggagtcatcaaggatgtg |
40035683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 130; E-Value: 2e-66
Query Start/End: Original strand, 1022 - 1426
Target Start/End: Original strand, 43076364 - 43076746
Alignment:
| Q |
1022 |
ttgttttctttgttgaatttgcagaactttttgtggttttaaacttttaaggacaa-tgggtaaggaaaaggttcacattaacattgttgtcattggcca |
1120 |
Q |
| |
|
||||||||||||||||||| ||||| |||||||| |||| |||||||| ||||||||||||||| ||| ||||||||||||||||||||| | |
|
|
| T |
43076364 |
ttgttttctttgttgaattggcagatatttttgtg--------ctttcaaggacaaatgggtaaggaaaaggctcagattaacattgttgtcattggcga |
43076455 |
T |
|
| Q |
1121 |
tgtcgactctgggaagtcaactaccactggtcacttgatctacaagcttggaggtattgacaagcgtgtgattgagaggtttgagaaagaagctgctgag |
1220 |
Q |
| |
|
|||||||||| ||||||||||| ||||||||| ||||||||| |||||||| |||| ||||||| |||||||| |||||||||||| |
|
|
| T |
43076456 |
tgtcgactctcggaagtcaact--------------gatctacaaacttggaggtgttgacaagagtgtcattgagaagtttgagatagaagctgctgaa |
43076541 |
T |
|
| Q |
1221 |
atgaacaagcgttcattcaagtatgcttgggttcttgacaagctcaaggctgagcgtgaaagaggtatcacaattgacattgctctgtggaagtttgaga |
1320 |
Q |
| |
|
||| ||| |||| |||||||||| ||| | ||||||||||||| |||||| |||||||||||||| || ||||| ||| |||| ||||||||||||| |
|
|
| T |
43076542 |
atgggtaagacttcagtcaagtatgcctggatccttgacaagctcagggctgaacgtgaaagaggtat-accattgagatttctctctggaagtttgaga |
43076640 |
T |
|
| Q |
1321 |
ccactaagtactactgcactgtcattgatgcccctggacacagggatttcattaagaacatgattactggtacatcccaagctgattgtgctgttctcat |
1420 |
Q |
| |
|
| || ||| ||| |||| ||||||||||| ||| ||||||| | ||||||||||||||||||| ||||| || |||||||||||||||||| |||| || |
|
|
| T |
43076641 |
caacaaagaactgctgcgttgtcattgatgtcccgggacacaagaatttcattaagaacatgatcactgggacgtcccaagctgattgtgctcttcttat |
43076740 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 97; E-Value: 1e-46
Query Start/End: Original strand, 2214 - 2446
Target Start/End: Complemental strand, 50911982 - 50911750
Alignment:
| Q |
2214 |
cctgttcttgactgccacacctcccacattgcagtcaagtttgctgagcttgttactaagattgacaggcgttctggtaaggagatcgagaaggagccta |
2313 |
Q |
| |
|
||||||||| | |||||||| ||| ||||||| |||||||||||| |||||||||| |||| || |||| || | | ||| || ||||||||||| | |
|
|
| T |
50911982 |
cctgttcttcattgccacacgtccaacattgctgtcaagtttgctaagcttgttaccaagaatgttaggcattattttgtggaaattgagaaggagccca |
50911883 |
T |
|
| Q |
2314 |
aattcctgaagaatggagatgctggtattattaagatgattcccaccaagcccatggtggttgagactttctctgaatatcctccacttggccgttttgc |
2413 |
Q |
| |
|
||||| |||||||||| || |||||| ||||| ||||||||||||||||||||||| |||| |||||||| || ||| |||| |||| ||||||||||| |
|
|
| T |
50911882 |
aattcttgaagaatggtgacgctggtgttattgagatgattcccaccaagcccatgttggtagagactttttccaaatttccttcactcggccgttttgc |
50911783 |
T |
|
| Q |
2414 |
tgtcagagatatgcggcaaactgtggctgttgg |
2446 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||| |
|
|
| T |
50911782 |
tgtcagagacatgcgtcaaactgtggctgttgg |
50911750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 57; E-Value: 8e-23
Query Start/End: Original strand, 2625 - 2839
Target Start/End: Original strand, 38139007 - 38139218
Alignment:
| Q |
2625 |
ttaagtgtgaagtctgcaccgtcatctcccagcttttgttcccagaactgggttctagatcgacggtggcatgactagttatttttcttgtttctgcttt |
2724 |
Q |
| |
|
|||||||| ||||||||||||||||||| ||||||||||||| |||||||| |||||||| || ||||||| | | || |||||| | ||| |||| | |
|
|
| T |
38139007 |
ttaagtgtcaagtctgcaccgtcatctcacagcttttgttccaagaactggcttctagattgatggtggca-ggccgtttctttttcgtttttatgctat |
38139105 |
T |
|
| Q |
2725 |
aattgtcttgtcttgtgtgaacacctgaattttacaagcagcaagtttccggacctgctga-tttgtttttaatatcaactctatatctgcgtgtttatt |
2823 |
Q |
| |
|
||| ||||||||||||| || || ||||| ||||||||| |||||||||||||||| ||| |||| |||||||||| | ||| | ||||||||| |
|
|
| T |
38139106 |
gattactgtgtcttgtgtgaatacttg-attttgtaagcagcaaatttccggacctgctgattttcttttgaatatcaactatttattt--gtgtttatt |
38139202 |
T |
|
| Q |
2824 |
ccttggtgtgatgttt |
2839 |
Q |
| |
|
||||| |||||||||| |
|
|
| T |
38139203 |
ccttgttgtgatgttt |
38139218 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 56; E-Value: 3e-22
Query Start/End: Original strand, 2625 - 2839
Target Start/End: Original strand, 7892161 - 7892376
Alignment:
| Q |
2625 |
ttaagtgtgaagtctgcaccgtcatctcccagcttttgttcccagaactgggttctagatcgacggtggcatgactagttatttttcttgtttctgcttt |
2724 |
Q |
| |
|
|||||||||| |||||||||||||||| ||||||||||||| |||||||| |||||||||| |||||||| | | | || ||||| | ||| |||| | |
|
|
| T |
7892161 |
ttaagtgtgatgtctgcaccgtcatctagcagcttttgttcctagaactggcttctagatcggcggtggcaggtccatttcttttttgtttttatgctat |
7892260 |
T |
|
| Q |
2725 |
aattgtcttgtcttgtgtgaacacctgaattttacaagcagcaagtttccggacctgctg-atttgtttttaatatcaactctatatctgcgtgtttatt |
2823 |
Q |
| |
|
||| | ||||| ||||||| || || ||||| |||||| |||||||| | ||||||| ||| |||| ||| |||||| | ||| |||||||||||| |
|
|
| T |
7892261 |
gattattgtgtctagtgtgaatacttggattttgtaagcagaaagtttccaggcctgctgcttttcttttaaatgtcaactatttatttgcgtgtttatt |
7892360 |
T |
|
| Q |
2824 |
ccttggtgtgatgttt |
2839 |
Q |
| |
|
||| ||||| |||||| |
|
|
| T |
7892361 |
cctcggtgtaatgttt |
7892376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 2032 - 2138
Target Start/End: Complemental strand, 50912140 - 50912034
Alignment:
| Q |
2032 |
ctctcactgaggcacttcccggtgacaatgtgggatttaatgttaagaatgtttctgtcaaggatctcaagcgtggttatgttgcctcaaacaccaagga |
2131 |
Q |
| |
|
|||||| |||||| |||| ||||||| |||||||||||||||||||||||| ||| ||||||||| ||| || ||| ||||||||||| |||| || |
|
|
| T |
50912140 |
ctctcattgaggccattcctggtgacattgtgggatttaatgttaagaatgtgtcttctaaggatctccggcgaggctatattgcctcaaactccaacga |
50912041 |
T |
|
| Q |
2132 |
tgaccca |
2138 |
Q |
| |
|
||||||| |
|
|
| T |
50912040 |
tgaccca |
50912034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.0000000000003
Query Start/End: Original strand, 2607 - 2695
Target Start/End: Original strand, 43079856 - 43079944
Alignment:
| Q |
2607 |
gttaagttgttttttggattaagtgtgaagtctgcaccgtcatctcccagcttttgttcccagaactgggttctagatcgacggtggca |
2695 |
Q |
| |
|
||||| |||||||| |||||||||| |||||||||||||| |||| |||| |||||||||| | ||||||||| |||||| |||||| |
|
|
| T |
43079856 |
gttaacttgtttttcagattaagtgtcaagtctgcaccgtcgtctcgcagcccttgttcccaggattgggttctatatcgactgtggca |
43079944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000007
Query Start/End: Original strand, 1044 - 1091
Target Start/End: Complemental strand, 29833801 - 29833753
Alignment:
| Q |
1044 |
agaactttttgtggttttaaactttt-aaggacaatgggtaaggaaaag |
1091 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
29833801 |
agaactttttgtggttttaagctttttaaggacaatgggtaaggaaaag |
29833753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 355; Significance: 0; HSPs: 12)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 1717 - 2479
Target Start/End: Complemental strand, 4619727 - 4618965
Alignment:
| Q |
1717 |
ttggctataacccagataaaattccatttgttcccatctctggttttgagggagataacatgattgagcgctctacaaatcttgactggtacaagggtcc |
1816 |
Q |
| |
|
||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||| | ||||||||||||||| ||||||| |
|
|
| T |
4619727 |
ttggctataaccctaaaaaaattacatttgttcccatctctggttttgagggagataacttgattgagcgttcttctaatcttgactggtacgagggtcc |
4619628 |
T |
|
| Q |
1817 |
aacacttcttgaggctcttgatcaaatcaatgagcctaagaggccatcagacaagcccctccgactacctcttcaggatgtctacaagattggaggaatt |
1916 |
Q |
| |
|
|| |||||||| |||||||| |||||||| |||||||| ||||||||| ||||||| |||||| |||| |||| ||||||||||||||||||||||||| |
|
|
| T |
4619627 |
cacccttcttgaagctcttgaccaaatcaacgagcctaataggccatcaaacaagcctctccgattaccacttcgggatgtctacaagattggaggaatt |
4619528 |
T |
|
| Q |
1917 |
ggaactgttcctgtgggacgtgttgagactggtaccatgaaacctggaatggtggtgacttttgctccaactggactgcaaactgaagtcaagtctgtgg |
2016 |
Q |
| |
|
|||||||| ||||||||| |||||||||| ||| | |||||||||||||| ||||||||||||| || | ||| |||||| ||||||| ||||||||| |
|
|
| T |
4619527 |
ggaactgtgcctgtgggatgtgttgagaccggtgtcttgaaacctggaatgatggtgacttttgccccgattgggctgcaagctgaagtaaagtctgtgc |
4619428 |
T |
|
| Q |
2017 |
agatgcatcatgaatctctcactgaggcacttcccggtgacaatgtgggatttaatgttaagaatgtttctgtcaaggatctcaagcgtggttatgttgc |
2116 |
Q |
| |
|
| ||| | ||| | |||||||||||| ||||| |||||||||||||||||||||||| ||||||| |||| || |||||||||| || ||||||| |
|
|
| T |
4619427 |
aaatggaccatacaaatctcactgaggcccttcctggtgacaatgtgggatttaatgttgagaatgtgtctgctgagcatctcaagcgaggctatgttgt |
4619328 |
T |
|
| Q |
2117 |
ctcaaacaccaaggatgacccagccaaggaggctgctaacttcacatctcaggtg--attatcatgaatcaccctggccagattggaaatggttatgccc |
2214 |
Q |
| |
|
||||||| ||||| ||||||||||||||||||| | |||||| ||||||| ||| || |||| ||||||||||||||||||||||||||| ||| | | |
|
|
| T |
4619327 |
ctcaaactccaagcatgacccagccaaggaggcagataactt--catctcatgtgttatcatcaggaatcaccctggccagattggaaatggctatacac |
4619230 |
T |
|
| Q |
2215 |
ctgttcttgactgccacacctcccacattgcagtcaagtttgctgagcttgttactaagattgacaggcgttctggtaaggagatcgagaaggagcctaa |
2314 |
Q |
| |
|
|||||||| | |||||||||||||||| ||| |||||||||| | ||||| | | |||||||||||| |||||||||||| || ||||| ||||| || |
|
|
| T |
4619229 |
ctgttcttcattgccacacctcccacactgctgtcaagtttgataagcttctagccaagattgacaggtgttctggtaaggtaattgagaatgagcccaa |
4619130 |
T |
|
| Q |
2315 |
attcctgaagaatggagatgctggtattattaagatgattcccaccaagcccatggtggttgagactttctctgaatatcctccacttggccgttttgct |
2414 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||| | |||||| |||| |||||||||||| |
|
|
| T |
4619129 |
attcctgaagaatggtgatgctggcattattaagatgattcccaccaagcccatggtggtagagactttttctaattatccttcactcggccgttttgct |
4619030 |
T |
|
| Q |
2415 |
gtcagagatatgcggcaaactgtggctgttggggttatcaagggtgtggagaagaaggaacctgg |
2479 |
Q |
| |
|
|||||||| || || | ||| ||||||||||| || || |||| |||| |||||||||| ||||| |
|
|
| T |
4619029 |
gtcagagacatacgtcgaacagtggctgttggagtcattaaggctgtgaagaagaaggatcctgg |
4618965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 1119 - 1538
Target Start/End: Complemental strand, 1847026 - 1846607
Alignment:
| Q |
1119 |
catgtcgactctgggaagtcaactaccactggtcacttgatctacaagcttggaggtattgacaagcgtgtgattgagaggtttgagaaagaagctgctg |
1218 |
Q |
| |
|
||||||||||| ||||||||||| || ||||||| |||||||||||||||||||||||||| ||| ||| || ||||| ||||||||||||||||||| |
|
|
| T |
1847026 |
catgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaaggatgtcatcgagagatttgagaaagaagctgctg |
1846927 |
T |
|
| Q |
1219 |
agatgaacaagcgttcattcaagtatgcttgggttcttgacaagctcaaggctgagcgtgaaagaggtatcacaattgacattgctctgtggaagtttga |
1318 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
1846926 |
agataaacaggcgttcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagaggtatcacaattgacatttctctatggaagtttga |
1846827 |
T |
|
| Q |
1319 |
gaccactaagtactactgcactgtcattgatgcccctggacacagggatttcattaagaacatgattactggtacatcccaagctgattgtgctgttctc |
1418 |
Q |
| |
|
||| || || | | ||||||| ||||||||||||| ||||||||||||||||||||||||||||| || || ||||| ||||||| ||||| ||||| |
|
|
| T |
1846826 |
gacaaccaacttcctctgcactctcattgatgcccccggacacagggatttcattaagaacatgatcaccggagcatccgaagctgactgtgccgttctt |
1846727 |
T |
|
| Q |
1419 |
atcattgattccaccactggtggttttgaagctggtatttccaaggatggtcagactcgtgaacatgctctccttgctttcactcttggtgtgaggcaaa |
1518 |
Q |
| |
|
|||||||| || || |||||||||||||||||||| ||| ||| |||||||||| |||||||| || ||||| | | |||||||||| |||| |
|
|
| T |
1846726 |
atcattgactctacacctggtggttttgaagctggtttttgtaagaatggtcagaccaatgaacatgttcaacttgcctacgctcttggtgtttcacaaa |
1846627 |
T |
|
| Q |
1519 |
tgatctgctgctgcaacaag |
1538 |
Q |
| |
|
||||||||||||| |||||| |
|
|
| T |
1846626 |
tgatctgctgctgtaacaag |
1846607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 1113 - 1544
Target Start/End: Complemental strand, 4620330 - 4619893
Alignment:
| Q |
1113 |
attggccatgtcgactctgggaagtcaactaccactggtcacttgatctacaagcttggaggtattgacaagcgtgtgattgagaggtttgagaaagaag |
1212 |
Q |
| |
|
||||| ||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||| | ||| ||| |||||| | ||||||||||||| |
|
|
| T |
4620330 |
attggtcatgtcgactctgggaagtcaaccactgctggtcatttgatctacaagcttggaggtattaaaaaggatgtcattgagcgatttgagaaagaag |
4620231 |
T |
|
| Q |
1213 |
ctgctgagatgaacaagcgttcattcaagtatgcttgggttcttgacaagctcaaggctgagcgtgaaagaggtatcacaattgacattgctctgtggaa |
1312 |
Q |
| |
|
| |||||||| |||| | |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| || |
|
|
| T |
4620230 |
ccgctgagataaacatgtgttcattcaaatatgcttgggtgcttgacaagctcaaggctgagcgtgaaagaggtatcacaatcgacatttctctgtccaa |
4620131 |
T |
|
| Q |
1313 |
gtttgagaccactaagtactactgcactgtcattgatgcccctggacacagggatttcattaagaacatgattactggtacatcccaagctgattgtgct |
1412 |
Q |
| |
|
||||||||| || ||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||| || || |||||||||||||| |||||| |
|
|
| T |
4620130 |
gtttgagacaaccaagtactactgcactctcattgatgcccccggacacagagatttcattaagaacatgatcaccggaacatcccaagctgactgtgct |
4620031 |
T |
|
| Q |
1413 |
gttctcatcattgattccaccactggtgg------ttttgaagctggtatttccaaggatggtcagactcgtgaacatgctctccttgctttcactcttg |
1506 |
Q |
| |
|
|||||| | |||||| || ||| ||| | |||| ||| |||||| | || | |||||| | |||||||||| |||||||||| || |||| |
|
|
| T |
4620030 |
gttctcgtatatgattctactactattggatctgactctgaaactgctatttctagggttcgtcagatccatgaacatgctgtccttgctttaacccttg |
4619931 |
T |
|
| Q |
1507 |
gtgtgaggcaaatgatctgctgctgcaacaaggtattt |
1544 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
4619930 |
gtgtgaagcaaatgatctgctgctacaacaaggtattt |
4619893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 177; E-Value: 2e-94
Query Start/End: Original strand, 1714 - 2154
Target Start/End: Complemental strand, 1846530 - 1846090
Alignment:
| Q |
1714 |
aggttggctataacccagataaaattccatttgttcccatctctggttttgagggagataacatgattgagcgctctacaaatcttgactggtacaaggg |
1813 |
Q |
| |
|
|||||||||||||||||| ||||||||| ||| | || |||||||||| |||||||||||||| ||||||| |||| | || ||||||||||||| ||| |
|
|
| T |
1846530 |
aggttggctataacccaggtaaaattccttttatccctatctctggttacgagggagataacatcattgagcactcttctaaccttgactggtacacggg |
1846431 |
T |
|
| Q |
1814 |
tccaacacttcttgaggctcttgatcaaatcaatgagcctaagaggccatcagacaagcccctccgactacctcttcaggatgtctacaagattggagga |
1913 |
Q |
| |
|
||| || |||||||| |||||||| ||||||| |||||||||| | | || ||| |||||| |||| ||||| ||||||||||||||||||||| |
|
|
| T |
1846430 |
tcccacccttcttgaagctcttgaccaaatcagaaggcctaagaggttaatattcaggcctctccgattaccacttcaagatgtctacaagattggagga |
1846331 |
T |
|
| Q |
1914 |
attggaactgttcctgtgggacgtgttgagactggtaccatgaaacctggaatggtggtgacttttgctccaactggactgcaaactgaagtcaagtctg |
2013 |
Q |
| |
|
||||||| ||| ||||||||||| |||||| |||||| | ||||||||||||||||| |||||||||| |||||||| || ||||||||||| ||||||| |
|
|
| T |
1846330 |
attggaattgtgcctgtgggacgcgttgagtctggtatcttgaaacctggaatggtgctgacttttgccccaactgggctccaaactgaagtgaagtctg |
1846231 |
T |
|
| Q |
2014 |
tggagatgcatcatgaatctctcactgaggcacttcccggtgacaatgtgggatttaatgttaagaatgtttctgtcaaggatctcaagcgtggttatgt |
2113 |
Q |
| |
|
|||||||||| |||||| ||||||| ||| ||||| ||||||| ||||||||||||||||| |||||| |||| |||||||||| ||| || ||||| |
|
|
| T |
1846230 |
tggagatgcaccatgaagctctcacccgggctcttcctggtgacattgtgggatttaatgttacgaatgtgtctgctaaggatctcaggcgaggctatgt |
1846131 |
T |
|
| Q |
2114 |
tgcctcaaacaccaaggatgacccagccaaggaggctgcta |
2154 |
Q |
| |
|
||||||| || || || || |||||| | ||||||||||| |
|
|
| T |
1846130 |
tgcctcacactcccagcgtggcccagctatggaggctgcta |
1846090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 147; E-Value: 2e-76
Query Start/End: Original strand, 1020 - 1545
Target Start/End: Complemental strand, 4298204 - 4297684
Alignment:
| Q |
1020 |
tgttgttttctttgttgaatttgcagaactttttgtggttttaaacttttaaggac-aatgggtaaggaaaaggttcacattaacattgttgtcattggc |
1118 |
Q |
| |
|
|||| |||||| ||||||||| ||||| ||||||||| ||| || ||||||||| ||||| |||| |||||| || ||||||||||| || |||||| |
|
|
| T |
4298204 |
tgttattttctgtgttgaattggcagatctttttgtgatttcaa---tttaaggactaatggataagaaaaaggctcgtattaacattgtggttattggc |
4298108 |
T |
|
| Q |
1119 |
catgtcgactctgggaagtcaactaccactggtcacttgatctacaagcttggaggtattgacaagcgtgtgattgagaggtttgagaaagaagctgctg |
1218 |
Q |
| |
|
|||| | |||| ||||||||||| || |||| ||| ||| ||||||| || ||||| ||||| ||| ||| |||||||| ||||||||| || || || |
|
|
| T |
4298107 |
catgccaactccgggaagtcaaccactactgctcatttgctctacaaactcggaggcattgaaaaggatgtcattgagagacttgagaaagtagatgttg |
4298008 |
T |
|
| Q |
1219 |
agatgaacaagcgttcattcaagtatgcttgggttcttgacaagctcaaggctgagcgtgaaagaggtatcacaattgacattgctctgtggaagtttga |
1318 |
Q |
| |
|
|| | |||| || ||| ||||||||||||||||| |||||||| ||||| ||||| | |||||||||| ||||||||||||| |||||| |||||||| |
|
|
| T |
4298007 |
aggttaacatgccttcgttcaagtatgcttgggtacttgacaaactcaaagctgaccatgaaagaggtgccacaattgacatttctctgtccaagtttga |
4297908 |
T |
|
| Q |
1319 |
gaccactaagtactactgcactgtcattgatgcccctggacacagggatttcattaagaacatgattactggtacatcccaagctgattgtgctgttctc |
1418 |
Q |
| |
|
||| | |||||| |||||| ||||||||||||||| ||||| ||||| | |||||||||||||| ||||| | |||| |||| | |||| ||||||| |
|
|
| T |
4297907 |
gacaaacaagtacaactgcattgtcattgatgcccccggacatagggaatgcattaagaacatgaccactggagcgtccctagctaactgtgatgttctc |
4297808 |
T |
|
| Q |
1419 |
atcattgattcc---accactggtggttttgaagctggtatttccaaggatggtcagactcgtgaacatgctctccttgctttcactcttggtgtgaggc |
1515 |
Q |
| |
|
||||||||||| || ||||||||||||||||| ||||| | ||||||||| |||||||||||| ||||| |||| |||||||| || | |
|
|
| T |
4297807 |
gtcattgattccactactactggtggttttgaagccggtat------gattggtcagacctttgaacatgctcttcttgccttcaatcttggtgcgaatc |
4297714 |
T |
|
| Q |
1516 |
aaatgatctgctgctgcaacaaggtatttg |
1545 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |
|
|
| T |
4297713 |
aaattatctgctgctgcaacaaggtatttg |
4297684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 111; E-Value: 5e-55
Query Start/End: Original strand, 1086 - 1384
Target Start/End: Original strand, 4787128 - 4787426
Alignment:
| Q |
1086 |
gaaaaggttcacattaacattgttgtcattggccatgtcgactctgggaagtcaactaccactggtcacttgatctacaagcttggaggtattgacaagc |
1185 |
Q |
| |
|
|||||||||| ||||||||||| || ||||| || | | |||| ||||||||||| ||||||| ||| ||| |||||||||||||||| |||| ||| |
|
|
| T |
4787128 |
gaaaaggttcgtattaacattgtggttattggtcaagccaactccgggaagtcaaccaccactgctcatttgctctacaagcttggaggcattggaaagg |
4787227 |
T |
|
| Q |
1186 |
gtgtgattgagaggtttgagaaagaagctgctgagatgaacaagcgttcattcaagtatgcttgggttcttgacaagctcaaggctgagcgtgaaagagg |
1285 |
Q |
| |
|
||| |||||||| |||||||||||||| |||| ||| || ||||||||||||||||||||| |||||||| ||||||| ||||||||||||||| |
|
|
| T |
4787228 |
atgtcattgagagacttgagaaagaagcttatgaggctaactggccttcattcaagtatgcttgggtgcttgacaaactcaagggtgagcgtgaaagagg |
4787327 |
T |
|
| Q |
1286 |
tatcacaattgacattgctctgtggaagtttgagaccactaagtactactgcactgtcattgatgcccctggacacagggatttcattaagaacatgat |
1384 |
Q |
| |
|
| ||||||||||||| || ||| ||||||||||| | |||||| ||||||||||||||||||| || ||||||||||| | ||||| ||||||||| |
|
|
| T |
4787328 |
tgccacaattgacatttctatgtccaagtttgagacaaacaagtacaactgcactgtcattgatgctcccggacacagggaatacattaggaacatgat |
4787426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 105; E-Value: 2e-51
Query Start/End: Original strand, 1713 - 2021
Target Start/End: Original strand, 4787648 - 4787956
Alignment:
| Q |
1713 |
aaggttggctataacccagataaaattccatttgttcccatctctggttttgagggagataacatgattgagcgctctacaaatcttgactggtacaagg |
1812 |
Q |
| |
|
|||||||||||||||||| || ||||||||||||||||||||||| ||||||| ||||||||| ||||||| ||||| || ||| |||||||||| | || |
|
|
| T |
4787648 |
aaggttggctataacccaaatgaaattccatttgttcccatctctagttttgatggagataacttgattgaccgctccactaattttgactggtaaatgg |
4787747 |
T |
|
| Q |
1813 |
gtccaacacttcttgaggctcttgatcaaatcaatgagcctaagaggccatcagacaagcccctccgactacctcttcaggatgtctacaagattggagg |
1912 |
Q |
| |
|
|||| || |||||||| ||| |||| ||| || |||||||||||||||||| | ||| ||||||||||| || |||| |||||||||||||||| |
|
|
| T |
4787748 |
gtccgacccttcttgaagctattgacagaatgaaagagcctaagaggccatcaaatttgcctctccgactaccaattatggatttctacaagattggagg |
4787847 |
T |
|
| Q |
1913 |
aattggaactgttcctgtgggacgtgttgagactggtaccatgaaacctggaatggtggtgacttttgctccaactggactgcaaactgaagtcaagtct |
2012 |
Q |
| |
|
||| ||| ||| ||||||||||||| ||||||||| | || ||||||||| ||||||||||| |||||||| ||||||| ||||||| | ||| |
|
|
| T |
4787848 |
aatcggagttgtgtctgtgggacgtgtcgagactggttgcttgtgccctggaatgtctgtgacttttgccccaactgggctgcaaattgaagtccaatct |
4787947 |
T |
|
| Q |
2013 |
gtggagatg |
2021 |
Q |
| |
|
||| ||||| |
|
|
| T |
4787948 |
gtgaagatg |
4787956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 89; E-Value: 7e-42
Query Start/End: Original strand, 1713 - 2021
Target Start/End: Complemental strand, 4297524 - 4297216
Alignment:
| Q |
1713 |
aaggttggctataacccagataaaattccatttgttcccatctctggttttgagggagataacatgattgagcgctctacaaatcttgactggtacaagg |
1812 |
Q |
| |
|
|||||||||||||| ||| || ||||||||||| ||||||||||| ||||||| ||||||||| ||||||| ||||| || ||| ||||||||||||||| |
|
|
| T |
4297524 |
aaggttggctataagccatatgaaattccatttattcccatctctagttttgacggagataacttgattgaccgctccactaattttgactggtacaagg |
4297425 |
T |
|
| Q |
1813 |
gtccaacacttcttgaggctcttgatcaaatcaatgagcctaagaggccatcagacaagcccctccgactacctcttcaggatgtctacaagattggagg |
1912 |
Q |
| |
|
|||| || |||||||| ||| |||| ||| || | |||| |||||||||| | || ||||||||| | |||||||| |||| || |||||||| |
|
|
| T |
4297424 |
gtcccacccttcttgaagctattgacataatgaaagggcctgcgaggccatcaaattttcctctccgactatcaattcaggatttctagaatattggagg |
4297325 |
T |
|
| Q |
1913 |
aattggaactgttcctgtgggacgtgttgagactggtaccatgaaacctggaatggtggtgacttttgctccaactggactgcaaactgaagtcaagtct |
2012 |
Q |
| |
|
||| || ||| |||||||| ||||| ||||||||| | || ||||||||| ||||||||||| |||||||| |||||| |||||||||| ||| |
|
|
| T |
4297324 |
aatcagagatgtgcctgtgggccgtgtcgagactggttgcttgcgccctggaatgtctgtgacttttgccccaactgggctgcaagctgaagtcaaatct |
4297225 |
T |
|
| Q |
2013 |
gtggagatg |
2021 |
Q |
| |
|
||||||||| |
|
|
| T |
4297224 |
gtggagatg |
4297216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 78; E-Value: 2e-35
Query Start/End: Original strand, 2093 - 2446
Target Start/End: Original strand, 4788078 - 4788431
Alignment:
| Q |
2093 |
ggatctcaagcgtggttatgttgcctcaaacaccaaggatgacccagccaaggaggctgctaacttcacatctcaggtgattatcatgaatcaccctggc |
2192 |
Q |
| |
|
||||||||||| || ||||||| || |||||||| |||||| ||||||||||| | | |||| |||||||| || || |||| ||||||||||| |
|
|
| T |
4788078 |
ggatctcaagcaaggctatgttgtctaaaacaccatggatgatgtggccaaggaggccgattactttacatctcatgttatcatcacaaatcaccctgga |
4788177 |
T |
|
| Q |
2193 |
cagattggaaatggttatgcccctgttcttgactgccacacctcccacattgcagtcaagtttgctgagcttgttactaagattgacaggcgttctggta |
2292 |
Q |
| |
|
||||||| ||| || ||| | ||| ||||| |||||||||||||||| ||||| ||| | |||| ||||||| || ||| |||||| | ||||||| |
|
|
| T |
4788178 |
cagattgaaaaaggctatacgcctattcttcactgccacacctcccaaattgctgtcgaatttgatgagcttatttgcaaggttgacaatcattctggtt |
4788277 |
T |
|
| Q |
2293 |
aggagatcgagaaggagcctaaattcctgaagaatggagatgctggtattattaagatgattcccaccaagcccatggtggttgagactttctctgaata |
2392 |
Q |
| |
|
||| || ||| || |||| |||| |||||||||| |||| |||| ||||| ||||| ||||||||||||| |||||||| ||| |||||| | ||| |
|
|
| T |
4788278 |
aggtaattgaggagaggcctgcattcttgaagaatggtgatgatggtcttattgagatggttcccaccaagcctatggtggtagagcctttctatctata |
4788377 |
T |
|
| Q |
2393 |
tcctccacttggccgttttgctgtcagagatatgcggcaaactgtggctgttgg |
2446 |
Q |
| |
|
|||||||||||||| ||||| |||| || | ||| ||||||||||||||||| |
|
|
| T |
4788378 |
tcctccacttggccattttgttgtccgatacttgcatcaaactgtggctgttgg |
4788431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 67; E-Value: 9e-29
Query Start/End: Original strand, 2052 - 2264
Target Start/End: Complemental strand, 4297140 - 4296931
Alignment:
| Q |
2052 |
ggtgacaatgtgggatttaatgttaagaatgtttctgtcaaggatctcaagcgtggttatgttgcctcaaacaccaaggatgacccagccaaggaggctg |
2151 |
Q |
| |
|
||||||| |||| |||||||||| || |||||||| | ||||||||||| || ||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
4297140 |
ggtgacattgtgagatttaatgtcaa---tgtttctgctacggatctcaagcaaggctatgttgcctcaaaccccgaggatgacccagccaaggaggtca |
4297044 |
T |
|
| Q |
2152 |
ctaacttcacatctcaggtgattatcatgaatcaccctggccagattggaaatggttatgcccctgttcttgactgccacacctcccacattgcagtcaa |
2251 |
Q |
| |
|
|| |||| |||||||| || || |||| ||||||||| ||||||||| | | || ||| | ||| ||||| |||||||||||||||||||| | ||||| |
|
|
| T |
4297043 |
ctcactttacatctcatgttatcatcacaaatcaccctagccagattgaagaaggctatacacctattcttcactgccacacctcccacattcctgtcaa |
4296944 |
T |
|
| Q |
2252 |
gtttgctgagctt |
2264 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4296943 |
atttgctgagctt |
4296931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-22
Query Start/End: Original strand, 1465 - 1544
Target Start/End: Original strand, 4787457 - 4787536
Alignment:
| Q |
1465 |
atggtcagactcgtgaacatgctctccttgctttcactcttggtgtgaggcaaatgatctgctgctgcaacaaggtattt |
1544 |
Q |
| |
|
|||||||||| | |||||||||||| ||||| |||||| ||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
4787457 |
atggtcagacccttgaacatgctcttcttgccttcactgttggtgtgaagcaaatgatctgctgctgcaacaaggtattt |
4787536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 2341 - 2446
Target Start/End: Complemental strand, 4296854 - 4296749
Alignment:
| Q |
2341 |
ttattaagatgattcccaccaagcccatggtggttgagactttctctgaatatcctccacttggccgttttgctgtcagagatatgcggcaaactgtggc |
2440 |
Q |
| |
|
|||||||||||||||||||| || | |||||||| ||| |||||||| || ||||||||| ||||||||| |||| ||| ||| |||| |||||| |
|
|
| T |
4296854 |
ttattaagatgattcccaccgagtctatggtggtagagcctttctctctatctcctccactcagccgttttgttgtccaagacttgcatcaaattgtggc |
4296755 |
T |
|
| Q |
2441 |
tgttgg |
2446 |
Q |
| |
|
|||||| |
|
|
| T |
4296754 |
tgttgg |
4296749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 339; Significance: 0; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 339; E-Value: 0
Query Start/End: Original strand, 1635 - 2473
Target Start/End: Original strand, 7519882 - 7520720
Alignment:
| Q |
1635 |
cagatggacgccactactcccaagtactccaagagcaggtatgatgaaattgtgaaggaagtatcatcctacatgaagaaggttggctataacccagata |
1734 |
Q |
| |
|
|||||||| || || || ||||||||||| ||| ||||| |||||||| ||||||||||| ||||||||| ||||||||||||| || |||||||| | |
|
|
| T |
7519882 |
cagatggatgctaccacccccaagtactcaaaggctaggtacgatgaaatcgtgaaggaagtttcatcctacttgaagaaggttggttacaacccagaca |
7519981 |
T |
|
| Q |
1735 |
aaattccatttgttcccatctctggttttgagggagataacatgattgagcgctctacaaatcttgactggtacaagggtccaacacttcttgaggctct |
1834 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| || || |||||||||||| | ||||| || ||||||||||||||||| ||||| || ||||||||||| |
|
|
| T |
7519982 |
aaatcccatttgttccaatctctggttttgaaggtgacaacatgattgagaggtctaccaaccttgactggtacaagggaccaactctccttgaggctct |
7520081 |
T |
|
| Q |
1835 |
tgatcaaatcaatgagcctaagaggccatcagacaagcccctccgactacctcttcaggatgtctacaagattggaggaattggaactgttcctgtggga |
1934 |
Q |
| |
|
||| || ||||| ||||| ||||| || |||||||||||||| | || || | || ||||| ||||||||||| || ||||||||||| || || ||| |
|
|
| T |
7520082 |
tgaccagatcaacgagcccaagagacccacagacaagcccctcaggcttccattgcaagatgtttacaagattggtggtattggaactgtgccagttgga |
7520181 |
T |
|
| Q |
1935 |
cgtgttgagactggtaccatgaaacctggaatggtggtgacttttgctccaactggactgcaaactgaagtcaagtctgtggagatgcatcatgaatctc |
2034 |
Q |
| |
|
||||||||||| |||| |||| || || ||||| |||||||||| || ||||| || ||||||||| |||||||| |||||||| || || ||| |
|
|
| T |
7520182 |
cgtgttgagaccggtattgtgaagcccggtatggttgtgacttttggacccactggtttgacaactgaagttaagtctgttgagatgcaccacgaggctc |
7520281 |
T |
|
| Q |
2035 |
tcactgaggcacttcccggtgacaatgtgggatttaatgttaagaatgtttctgtcaaggatctcaagcgtggttatgttgcctcaaacaccaaggatga |
2134 |
Q |
| |
|
||||||| || ||||| || |||||||| ||||| ||||||||||||||| | || ||||||||||||||||||| ||||| || ||| |||||||||| |
|
|
| T |
7520282 |
tcactgaagctcttccaggagacaatgttggattcaatgttaagaatgttgccgtgaaggatctcaagcgtggtttcgttgcatccaactccaaggatga |
7520381 |
T |
|
| Q |
2135 |
cccagccaaggaggctgctaacttcacatctcaggtgattatcatgaatcaccctggccagattggaaatggttatgcccctgttcttgactgccacacc |
2234 |
Q |
| |
|
||| || ||||| ||||| |||||||| || || || || |||||||| |||||||| |||||||||||||| ||||| || || || || ||||||||| |
|
|
| T |
7520382 |
ccctgcaaaggaagctgccaacttcacttcccaagtcatcatcatgaaccaccctggacagattggaaatggatatgcaccagtgctcgattgccacacc |
7520481 |
T |
|
| Q |
2235 |
tcccacattgcagtcaagtttgctgagcttgttactaagattgacaggcgttctggtaaggagatcgagaaggagcctaaattcctgaagaatggagatg |
2334 |
Q |
| |
|
|| |||||||| || ||||||||||| |||||||| |||||||||||||| |||||||||||||| ||||||||||| || ||| ||||||| || |||| |
|
|
| T |
7520482 |
tctcacattgctgtgaagtttgctgaacttgttaccaagattgacaggcgatctggtaaggagattgagaaggagcccaagttcttgaagaacggtgatg |
7520581 |
T |
|
| Q |
2335 |
ctggtattattaagatgattcccaccaagcccatggtggttgagactttctctgaatatcctccacttggccgttttgctgtcagagatatgcggcaaac |
2434 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||| ||||| |||||||| ||||| || ||||| ||||| |
|
|
| T |
7520582 |
ctggtatcattaagatggttcccaccaagcccatggtggttgagaccttcgctgaatatcctcctcttggacgttttgccgtcagggacatgcgtcaaac |
7520681 |
T |
|
| Q |
2435 |
tgtggctgttggggttatcaagggtgtggagaagaagga |
2473 |
Q |
| |
|
||| |||||||| || ||||||| ||||||||||||||| |
|
|
| T |
7520682 |
tgttgctgttggtgtcatcaaggctgtggagaagaagga |
7520720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 1635 - 2473
Target Start/End: Original strand, 7529419 - 7530257
Alignment:
| Q |
1635 |
cagatggacgccactactcccaagtactccaagagcaggtatgatgaaattgtgaaggaagtatcatcctacatgaagaaggttggctataacccagata |
1734 |
Q |
| |
|
|||||||| || || || ||||||||||| ||| ||||| |||||||| ||||||||||| ||||||||| ||||||||||||| || ||||| || | |
|
|
| T |
7529419 |
cagatggatgctaccacccccaagtactcaaaggctaggtacgatgaaatcgtgaaggaagtttcatcctacttgaagaaggttggttacaaccctgaca |
7529518 |
T |
|
| Q |
1735 |
aaattccatttgttcccatctctggttttgagggagataacatgattgagcgctctacaaatcttgactggtacaagggtccaacacttcttgaggctct |
1834 |
Q |
| |
|
|||| ||||||||||||||||| || ||||| || || |||||||||||| | || || || ||||||||||||||||| ||||| || ||||||||||| |
|
|
| T |
7529519 |
aaatcccatttgttcccatctccggatttgaaggtgacaacatgattgagaggtccaccaaccttgactggtacaagggaccaactctccttgaggctct |
7529618 |
T |
|
| Q |
1835 |
tgatcaaatcaatgagcctaagaggccatcagacaagcccctccgactacctcttcaggatgtctacaagattggaggaattggaactgttcctgtggga |
1934 |
Q |
| |
|
||| || ||||| ||||| ||||| || |||||||||||||| | || || | || ||||| ||||||||||| || ||||||||||| || || ||| |
|
|
| T |
7529619 |
tgaccagatcaacgagcccaagagacccacagacaagcccctcaggcttccattgcaagatgtttacaagattggtggtattggaactgtgccagtcgga |
7529718 |
T |
|
| Q |
1935 |
cgtgttgagactggtaccatgaaacctggaatggtggtgacttttgctccaactggactgcaaactgaagtcaagtctgtggagatgcatcatgaatctc |
2034 |
Q |
| |
|
||||||||||| |||| |||| || || ||||| |||||||||| || ||||| || ||||||||| |||||||| |||||||| || || ||| |
|
|
| T |
7529719 |
cgtgttgagaccggtattgtgaagcccggtatggttgtgacttttggacccactggtctaacaactgaagttaagtctgttgagatgcaccacgaggctc |
7529818 |
T |
|
| Q |
2035 |
tcactgaggcacttcccggtgacaatgtgggatttaatgttaagaatgtttctgtcaaggatctcaagcgtggttatgttgcctcaaacaccaaggatga |
2134 |
Q |
| |
|
||||||| || ||||| || |||||||| ||||| ||||||||||||||| |||| ||||||||||||||||||| ||||| || ||| |||||||||| |
|
|
| T |
7529819 |
tcactgaagctcttccaggagacaatgtcggattcaatgttaagaatgttgctgtgaaggatctcaagcgtggtttcgttgcatccaactccaaggatga |
7529918 |
T |
|
| Q |
2135 |
cccagccaaggaggctgctaacttcacatctcaggtgattatcatgaatcaccctggccagattggaaatggttatgcccctgttcttgactgccacacc |
2234 |
Q |
| |
|
||| || ||||| ||||| |||||||| || || || || |||||||| |||||||| |||||||||||||| ||||| || || || || ||||||||| |
|
|
| T |
7529919 |
ccctgcaaaggaagctgccaacttcacttcccaagtcatcatcatgaaccaccctggacagattggaaatggatatgcaccagtgctcgattgccacacc |
7530018 |
T |
|
| Q |
2235 |
tcccacattgcagtcaagtttgctgagcttgttactaagattgacaggcgttctggtaaggagatcgagaaggagcctaaattcctgaagaatggagatg |
2334 |
Q |
| |
|
|| |||||||| || ||||||||||| |||||||| |||||||||||||| |||||||||||||| ||||||||||| || ||| |||||||||| |||| |
|
|
| T |
7530019 |
tctcacattgctgtgaagtttgctgaacttgttaccaagattgacaggcgatctggtaaggagattgagaaggagcccaagttcttgaagaatggtgatg |
7530118 |
T |
|
| Q |
2335 |
ctggtattattaagatgattcccaccaagcccatggtggttgagactttctctgaatatcctccacttggccgttttgctgtcagagatatgcggcaaac |
2434 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||||||||||||||| || ||||||||||||| ||||| |||||||||||||| || ||||| ||||| |
|
|
| T |
7530119 |
ctggtatcattaagatggttcccaccaagcccatggtggttgagacctttgctgaatatcctcctcttggacgttttgctgtcagggacatgcgtcaaac |
7530218 |
T |
|
| Q |
2435 |
tgtggctgttggggttatcaagggtgtggagaagaagga |
2473 |
Q |
| |
|
||| |||||||| || ||||||| ||||||||||||||| |
|
|
| T |
7530219 |
tgttgctgttggtgtcatcaaggctgtggagaagaagga |
7530257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 1077 - 1541
Target Start/End: Original strand, 7519328 - 7519792
Alignment:
| Q |
1077 |
atgggtaaggaaaaggttcacattaacattgttgtcattggccatgtcgactctgggaagtcaactaccactggtcacttgatctacaagcttggaggta |
1176 |
Q |
| |
|
||||| || |||||| |||| || ||||||||||||||||| |||||||||||||| || ||||| || ||||||||||||||||||||||| ||||||| |
|
|
| T |
7519328 |
atgggaaaagaaaagattcatatcaacattgttgtcattggacatgtcgactctggaaaatcaacaacaactggtcacttgatctacaagctaggaggta |
7519427 |
T |
|
| Q |
1177 |
ttgacaagcgtgtgattgagaggtttgagaaagaagctgctgagatgaacaagcgttcattcaagtatgcttgggttcttgacaagctcaaggctgagcg |
1276 |
Q |
| |
|
|||||||||||||||| ||||| || ||||| ||||||||||||||||||||| | || |||||||| || ||||||||||||||||| ||||||||||| |
|
|
| T |
7519428 |
ttgacaagcgtgtgatcgagagattcgagaaggaagctgctgagatgaacaagaggtctttcaagtacgcatgggttcttgacaagcttaaggctgagcg |
7519527 |
T |
|
| Q |
1277 |
tgaaagaggtatcacaattgacattgctctgtggaagtttgagaccactaagtactactgcactgtcattgatgcccctggacacagggatttcattaag |
1376 |
Q |
| |
|
||||||||| || || ||||| |||||| ||||||| ||||||||||| |||||||||||||| ||||||||||| || ||||| | |||||||| ||| |
|
|
| T |
7519528 |
tgaaagaggaattaccattgatattgctttgtggaaatttgagaccaccaagtactactgcacagtcattgatgctcccggacatcgtgatttcatcaag |
7519627 |
T |
|
| Q |
1377 |
aacatgattactggtacatcccaagctgattgtgctgttctcatcattgattccaccactggtggttttgaagctggtatttccaaggatggtcagactc |
1476 |
Q |
| |
|
|||||||||||||| || ||||| |||||||||||||| || |||||||| ||||||||||||||||||||||||||||| || |||||||| ||||| | |
|
|
| T |
7519628 |
aacatgattactggaacctcccaggctgattgtgctgtccttatcattgactccaccactggtggttttgaagctggtatctctaaggatggacagaccc |
7519727 |
T |
|
| Q |
1477 |
gtgaacatgctctccttgctttcactcttggtgtgaggcaaatgatctgctgctgcaacaaggta |
1541 |
Q |
| |
|
|||| |||||||| ||||| || |||||||| |||| ||| |||||||| || || ||||||||| |
|
|
| T |
7519728 |
gtgagcatgctcttcttgcatttactcttggagtgaagcagatgatctgttgttgtaacaaggta |
7519792 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 241; E-Value: 1e-132
Query Start/End: Original strand, 1077 - 1541
Target Start/End: Original strand, 7528699 - 7529163
Alignment:
| Q |
1077 |
atgggtaaggaaaaggttcacattaacattgttgtcattggccatgtcgactctgggaagtcaactaccactggtcacttgatctacaagcttggaggta |
1176 |
Q |
| |
|
||||| || |||||| |||| || |||||||| |||||||| |||||||||||||| || ||||| || ||||||||||||||||||||||| ||||||| |
|
|
| T |
7528699 |
atgggaaaagaaaagattcatatcaacattgtcgtcattggacatgtcgactctggaaaatcaacaacaactggtcacttgatctacaagctaggaggta |
7528798 |
T |
|
| Q |
1177 |
ttgacaagcgtgtgattgagaggtttgagaaagaagctgctgagatgaacaagcgttcattcaagtatgcttgggttcttgacaagctcaaggctgagcg |
1276 |
Q |
| |
|
|||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||| |
|
|
| T |
7528799 |
ttgacaagcgtgtgatcgagagatttgagaaggaagctgctgagatgaacaagcgttcattcaagtatgcatgggttcttgacaaacttaaggctgagcg |
7528898 |
T |
|
| Q |
1277 |
tgaaagaggtatcacaattgacattgctctgtggaagtttgagaccactaagtactactgcactgtcattgatgcccctggacacagggatttcattaag |
1376 |
Q |
| |
|
||||||||| || || || || ||||| ||||||| ||||||||||| |||||||||||||| ||||||||||| || ||||| | |||||||| ||| |
|
|
| T |
7528899 |
tgaaagaggaattaccatcgatattgccttgtggaaatttgagaccaccaagtactactgcacagtcattgatgctcccggacatcgtgatttcatcaag |
7528998 |
T |
|
| Q |
1377 |
aacatgattactggtacatcccaagctgattgtgctgttctcatcattgattccaccactggtggttttgaagctggtatttccaaggatggtcagactc |
1476 |
Q |
| |
|
|||||||||||||| || ||||| ||||||||||| || || |||||||| ||||||||||||||||||||||||||||| || |||||||| ||||| | |
|
|
| T |
7528999 |
aacatgattactggaacctcccaggctgattgtgccgtgcttatcattgactccaccactggtggttttgaagctggtatctctaaggatggacagaccc |
7529098 |
T |
|
| Q |
1477 |
gtgaacatgctctccttgctttcactcttggtgtgaggcaaatgatctgctgctgcaacaaggta |
1541 |
Q |
| |
|
|||| || ||||| ||||| || |||||||| |||| ||| |||||||| || || ||||||||| |
|
|
| T |
7529099 |
gtgagcacgctcttcttgcatttactcttggagtgaagcagatgatctgttgttgtaacaaggta |
7529163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 243; Significance: 1e-134; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 1716 - 2446
Target Start/End: Complemental strand, 16349186 - 16348456
Alignment:
| Q |
1716 |
gttggctataacccagataaaattccatttgttcccatctctggttttgagggagataacatgattgagcgctctacaaatcttgactggtacaagggtc |
1815 |
Q |
| |
|
||||||||||| | ||| || || ||||||||||||||||||||||||||||||||||| || |||||| ||||||||| ||||| |||||||||||| |
|
|
| T |
16349186 |
gttggctataaacaagacgaagttacatttgttcccatctctggttttgagggagataacttggttgagccctctacaaaacttgatgggtacaagggtc |
16349087 |
T |
|
| Q |
1816 |
caacacttcttgaggctcttgatcaaatcaatgagcctaagaggccatcagacaagcccctccgactacctcttcaggatgtctacaagattggaggaat |
1915 |
Q |
| |
|
| || |||||||| |||||||| | |||||| ||||||||||||| |||||||||||| |||||| |||| ||||||| ||||||||||||||||||||| |
|
|
| T |
16349086 |
ccacccttcttgaagctcttgaccgaatcaacgagcctaagaggctatcagacaagcctctccgattaccacttcagggtgtctacaagattggaggaat |
16348987 |
T |
|
| Q |
1916 |
tggaactgttcctgtgggacgtgttgagactggtaccatgaaacctggaatggtggtgacttttgctccaactggactgcaaactgaagtcaagtctgtg |
2015 |
Q |
| |
|
|||| || | ||| ||| |||| ||||||| | |||||||||||||||||||||||||| | |||| ||| | |||| ||| || | ||||||| |
|
|
| T |
16348986 |
tggagctttggctgcaggatgtgtcaggactggtgtcttgaaacctggaatggtggtgactttttccccaaatggccggcaaggtgaggtgacgtctgtg |
16348887 |
T |
|
| Q |
2016 |
gagatgcatcatgaatctctcactgaggcacttcccggtgacaatgtgggatttaatgttaagaatgtttctgtcaaggatctcaagcgtggttatgttg |
2115 |
Q |
| |
|
||||| | |||||| ||| | ||||| ||||| ||||| |||||| ||||| |||| ||||||| |||| |||||| || || ||||||| |
|
|
| T |
16348886 |
aagatggaccatgaagatctttccgaggcccttcctggtgataatgtgagatttgctgttgagaatgtgtctgatgcacatctcagccgaggctatgttg |
16348787 |
T |
|
| Q |
2116 |
cctcaaacaccaaggatgacccagccaaggaggctgctaacttcacatctcaggtgattatcatgaatcaccctggccagattggaaatggttatgcccc |
2215 |
Q |
| |
|
|||||||| ||||| || |||||||||||||||| |||||| |||||||| || || |||| ||||||||||||||| |||| ||| |||||| | || |
|
|
| T |
16348786 |
cctcaaactccaagcatcacccagccaaggaggccattaactttacatctcaagttatcatcacgaatcaccctggccaaattgaaaagggttatacacc |
16348687 |
T |
|
| Q |
2216 |
tgttcttgactgccacacctcccacattgcagtcaagtttgctgagcttgttactaagattgacaggcgttctggtaaggagatcgagaaggagcctaaa |
2315 |
Q |
| |
|
||||||| |||||||||||||| ||||||| |||||||||||| ||||| || | ||| | |||||| |||||| ||| || | ||||||||| ||| |
|
|
| T |
16348686 |
tgttcttaactgccacacctcctacattgctgtcaagtttgctaagcttcttgccaaggtagacaggttttctggcaagataattgtgaaggagcccaaa |
16348587 |
T |
|
| Q |
2316 |
ttcctgaagaatggagatgctggtattattaagatgattcccaccaagcccatggtggttgagactttctctgaatatcctccacttggccgttttgctg |
2415 |
Q |
| |
|
||| ||||||| || |||| ||| |||||| |||||||||||||||||||||||||||| |||||||| |||||||||||| |||| ||||||||| || |
|
|
| T |
16348586 |
ttcttgaagaaaggtgatggtggcattattcagatgattcccaccaagcccatggtggtagagactttttctgaatatccttcactcggccgttttattg |
16348487 |
T |
|
| Q |
2416 |
tcagagatatgcggcaaactgtggctgttgg |
2446 |
Q |
| |
|
||||||||| || |||||||||||| |||| |
|
|
| T |
16348486 |
tcagagatacgcatcaaactgtggctattgg |
16348456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 187; E-Value: 1e-100
Query Start/End: Original strand, 1201 - 1543
Target Start/End: Complemental strand, 16349691 - 16349349
Alignment:
| Q |
1201 |
ttgagaaagaagctgctgagatgaacaagcgttcattcaagtatgcttgggttcttgacaagctcaaggctgagcgtgaaagaggtatcacaattgacat |
1300 |
Q |
| |
|
||||||| ||||||||||| | |||||| ||| ||||||||||| |||||||||||||| |||||||||||||| |||||||||||||||||||||| |
|
|
| T |
16349691 |
ttgagaataaagctgctgagttaaacaaggattctttcaagtatgcgtgggttcttgacaaactcaaggctgagcgcgaaagaggtatcacaattgacaa |
16349592 |
T |
|
| Q |
1301 |
tgctctgtggaagtttgagaccactaagtactactgcactgtcattgatgcccctggacacagggatttcattaagaacatgattactggtacatcccaa |
1400 |
Q |
| |
|
| || ||| ||| |||||||| || |||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
16349591 |
ttctatgttgaattttgagacaaccaagtaccgctgcactatcattgatgcccccggacacagggatttcattaagaacatgattactgggacatcccaa |
16349492 |
T |
|
| Q |
1401 |
gctgattgtgctgttctcatcattgattccaccactggtggttttgaagctggtatttccaaggatggtcagactcgtgaacatgctctccttgctttca |
1500 |
Q |
| |
|
|||||||||||| |||| ||| |||||||||| ||| |||||||| ||| ||||||||||| ||||||||| |||||||||||||||| ||||| | |
|
|
| T |
16349491 |
gctgattgtgctcttcttatcgttgattccactcctgctggttttggagccggtatttccaataatggtcagatccgtgaacatgctctccatgcttact |
16349392 |
T |
|
| Q |
1501 |
ctcttggtgtgaggcaaatgatctgctgctgcaacaaggtatt |
1543 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||||||||||| |
|
|
| T |
16349391 |
ctcttggtgtcaagcaaatgatctgctgctgcaacaaggtatt |
16349349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 49; E-Value: 5e-18
Query Start/End: Original strand, 1086 - 1174
Target Start/End: Complemental strand, 16352295 - 16352207
Alignment:
| Q |
1086 |
gaaaaggttcacattaacattgttgtcattggccatgtcgactctgggaagtcaactaccactggtcacttgatctacaagcttggagg |
1174 |
Q |
| |
|
||||||||||| ||||||||||| || ||||| |||||| |||||||||||||||| ||| | ||||| ||| |||||||||||||||| |
|
|
| T |
16352295 |
gaaaaggttcatattaacattgtggttattggtcatgtcaactctgggaagtcaaccaccgccggtcatttgttctacaagcttggagg |
16352207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 226; Significance: 1e-123; HSPs: 9)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 226; E-Value: 1e-123
Query Start/End: Original strand, 1088 - 1544
Target Start/End: Complemental strand, 34691490 - 34691036
Alignment:
| Q |
1088 |
aaaggttcacattaacattgttgtcattggccatgtcgactctgggaagtcaactaccactggtcacttgatctacaagcttggaggtattgacaagcgt |
1187 |
Q |
| |
|
||||||||| || |||||||| | ||||| |||||| ||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| ||| || |
|
|
| T |
34691490 |
aaaggttcatatcaacattgtgtttattggtcatgtcaactctgggaagtcaactacggctggtcatttgatttacaagcttggaggtattgaaaagagt |
34691391 |
T |
|
| Q |
1188 |
gtgattgagaggtttgagaaagaagctgctgagatgaacaagcgttcattcaagtatgcttgggttcttgacaagctcaaggctgagcgtgaaagaggta |
1287 |
Q |
| |
|
| |||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
34691390 |
gccattgaggcacttgggaaagaagctgctgagatgaagaagcgttcattcaagtatgcttgggtgcttgacaagctcaacgctgagcgtgaaagaggta |
34691291 |
T |
|
| Q |
1288 |
tcacaattgacattgctctgtggaagtttgagaccactaagtactactgcactgtcattgatgcccctggacacagggatttcattaagaacatgattac |
1387 |
Q |
| |
|
|||||||||||||| ||| || ||||||||||| || ||||||| || |||| |||||||||| || ||||||||||||||||||||||||||||| || |
|
|
| T |
34691290 |
tcacaattgacatt--tctatgcaagtttgagacaaccaagtactgcttcactctcattgatgctcccggacacagggatttcattaagaacatgatcac |
34691193 |
T |
|
| Q |
1388 |
tggtacatcccaagctgattgtgctgttctcatcattgattccaccactggtggttttgaagctggtatttccaaggatggtcagactcgtgaacatgct |
1487 |
Q |
| |
|
|| || ||||||||||| |||||||||||| |||||||||| || ||| | ||||| ||||||| || ||| |||||||||| | ||||||||| |
|
|
| T |
34691192 |
cgggacctcccaagctgactgtgctgttctcgtcattgattcgactactagaggtttgcgagctggttggtctaagaatggtcagacctgggaacatgct |
34691093 |
T |
|
| Q |
1488 |
ctccttgctttcactcttggtgtgaggcaaatgatctgctgctgcaacaaggtattt |
1544 |
Q |
| |
|
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34691092 |
cttcttgccttcactcttggtgtgaggcaaatgatctgctgctgcaacaaggtattt |
34691036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 226; E-Value: 1e-123
Query Start/End: Original strand, 1088 - 1544
Target Start/End: Complemental strand, 34713902 - 34713448
Alignment:
| Q |
1088 |
aaaggttcacattaacattgttgtcattggccatgtcgactctgggaagtcaactaccactggtcacttgatctacaagcttggaggtattgacaagcgt |
1187 |
Q |
| |
|
||||||||| || |||||||| | ||||| |||||| ||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| ||| || |
|
|
| T |
34713902 |
aaaggttcatatcaacattgtgtttattggtcatgtcaactctgggaagtcaactacggctggtcatttgatttacaagcttggaggtattgaaaagagt |
34713803 |
T |
|
| Q |
1188 |
gtgattgagaggtttgagaaagaagctgctgagatgaacaagcgttcattcaagtatgcttgggttcttgacaagctcaaggctgagcgtgaaagaggta |
1287 |
Q |
| |
|
| |||||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
34713802 |
gccattgaggcacttgggaaagaagctgctgagatgaagaagcgttcattcaagtatgcttgggtgcttgacaagctcaacgctgagcgtgaaagaggta |
34713703 |
T |
|
| Q |
1288 |
tcacaattgacattgctctgtggaagtttgagaccactaagtactactgcactgtcattgatgcccctggacacagggatttcattaagaacatgattac |
1387 |
Q |
| |
|
|||||||||||||| ||| || ||||||||||| || ||||||| || |||| |||||||||| || ||||||||||||||||||||||||||||| || |
|
|
| T |
34713702 |
tcacaattgacatt--tctatgcaagtttgagacaaccaagtactgcttcactctcattgatgctcccggacacagggatttcattaagaacatgatcac |
34713605 |
T |
|
| Q |
1388 |
tggtacatcccaagctgattgtgctgttctcatcattgattccaccactggtggttttgaagctggtatttccaaggatggtcagactcgtgaacatgct |
1487 |
Q |
| |
|
|| || ||||||||||| |||||||||||| |||||||||| || ||| | ||||| ||||||| || ||| |||||||||| | ||||||||| |
|
|
| T |
34713604 |
cgggacctcccaagctgactgtgctgttctcgtcattgattcgactactagaggtttgcgagctggttggtctaagaatggtcagacctgggaacatgct |
34713505 |
T |
|
| Q |
1488 |
ctccttgctttcactcttggtgtgaggcaaatgatctgctgctgcaacaaggtattt |
1544 |
Q |
| |
|
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34713504 |
cttcttgccttcactcttggtgtgaggcaaatgatctgctgctgcaacaaggtattt |
34713448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 178; E-Value: 5e-95
Query Start/End: Original strand, 1113 - 1543
Target Start/End: Complemental strand, 16232814 - 16232380
Alignment:
| Q |
1113 |
attggccatgtcgactctgggaagtcaactaccactggtcacttgatctacaagcttggaggtattgacaagcgtgtgattgagaggtttgagaaagaag |
1212 |
Q |
| |
|
||||| |||||| | ||||||||||||||||| | ||||| ||| | |||||||||||||||||| | ||| ||| |||||| ||| |||||||| |
|
|
| T |
16232814 |
attggtcatgtcaattctgggaagtcaactactgccggtcatttgctttacaagcttggaggtattcaaaagagtgccattgaggcacttgggaaagaag |
16232715 |
T |
|
| Q |
1213 |
ctgctgagatgaacaagcgttcattcaagtatgcttgggttcttgacaagctcaaggctgagcgtgaaagaggtatcacaattgacattgctctgtggaa |
1312 |
Q |
| |
|
||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||| || |
|
|
| T |
16232714 |
ctgctgagatgaagatgcgttcattcaagtatgcttgggtgcttgacaagctcaaggctgagcgtgaaagaggtatcacaattgacatttccatgtgcaa |
16232615 |
T |
|
| Q |
1313 |
gtttgagaccactaagtactactgcactgtcattgatgcccctggacacagggatttca----ttaagaacatgattactggtacatcccaagctgattg |
1408 |
Q |
| |
|
||||||||| || ||||||| ||||| ||||||||||||| |||||||||||||||| ||||||||||||| | || || ||| ||||||| || |
|
|
| T |
16232614 |
gtttgagacaaccaagtactgttgcaccctcattgatgcccccggacacagggatttcattaattaagaacatgatcatcgggacctccgaagctgactg |
16232515 |
T |
|
| Q |
1409 |
tgctgttctcatcattgattccaccactggtggttttgaagctggtatttccaaggatggtcagactcgtgaacatgctctccttgctttcactcttggt |
1508 |
Q |
| |
|
||||||||| |||| ||||||| ||| ||||| |||||||| || |||||||||||||| | ||||||||||| ||||| | |||||||||| |
|
|
| T |
16232514 |
tgctgttctagtcatcaattccactactctcggtttgcaagctggttggtctaaggatggtcagacctgggaacatgctctacttgcgtacactcttggt |
16232415 |
T |
|
| Q |
1509 |
gtgaggcaaatgatctgctgctgcaacaaggtatt |
1543 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
16232414 |
gtgaggcaaatgatctgctgctgcaacaaggtatt |
16232380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 178; E-Value: 5e-95
Query Start/End: Original strand, 1717 - 2446
Target Start/End: Complemental strand, 33860879 - 33860143
Alignment:
| Q |
1717 |
ttggctataacccagataaaattccatttgttcccatctctggttttgagggagataacatgattgagcgctctacaaatcttgactggtacaagggtcc |
1816 |
Q |
| |
|
|||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
33860879 |
ttggctataacctagacaaagttccatttgttcccatctctggttttgagggagataacttgattgagcgctctactaatcttgactggtacaagggtcc |
33860780 |
T |
|
| Q |
1817 |
aacacttcttgaggctcttgatcaaatcaatgagcctaag------aggccatcagacaagcccctccgactacctcttcaggatgtctacaa-gattgg |
1909 |
Q |
| |
|
|| |||||||| |||||||| | ||| | |||| | |||| || ||| || |||||| |||| ||||| | ||||||||| |||||| |
|
|
| T |
33860779 |
cacccttcttgaagctcttgaccgtatctaattgcctctgtctgcgaggctatttctcaatcctctccgaataccacttcatggtgtctacaaagattgg |
33860680 |
T |
|
| Q |
1910 |
aggaattggaactgttcctgtgggacgtgttgagactggtaccatgaaacctggaatggtggtgacttttgctccaactggactgcaaactgaagtcaag |
2009 |
Q |
| |
|
|||||| |||| ||| | ||| |||||||||| ||||||| | ||||||||||||||| |||||||||||| |||||||| |||||| || |||| || |
|
|
| T |
33860679 |
aggaatcggaaatgtgcatgtaggacgtgttgtgactggtcacttgaaacctggaatggcggtgacttttgccccaactgggctgcaagatgtagtcgag |
33860580 |
T |
|
| Q |
2010 |
tctgtggagatgcatcatgaatctctcactgaggcacttcccggtgacaatgtgggatttaatgttaagaatgtttctgtcaaggatctcaagcgtggtt |
2109 |
Q |
| |
|
|||||| ||||| || |||| || || || || ||||||||||| ||||||||| || ||||||||| ||| |||||||||| || | |
|
|
| T |
33860579 |
tctgtgcagatggatggtgaagctgtccctatcgcctttcccggtgactttgtgggattagattgcaagaatgttgctgctggtgatctcaagccgggct |
33860480 |
T |
|
| Q |
2110 |
atgttgcctcaaacaccaaggatgacccagccaaggaggctgctaacttcacatctcaggtgattatcatgaatcaccctggccagattggaaatggtta |
2209 |
Q |
| |
|
||||||||||| || ||| ||| ||||||||| ||| || ||| |||| |||||||| || || |||| ||| ||||||||| |||| |||| || | |
|
|
| T |
33860479 |
atgttgcctcagactccatcgatcacccagccacggaagccgctcactttacatctcaagttatcatcacaaatgaccctggcctgattagaaaaggctt |
33860380 |
T |
|
| Q |
2210 |
tgcccctgttcttgactgccacacctcccacattgcagtcaagtttgctgagcttgttactaagattgacaggcgttctggtaaggagatcgagaaggag |
2309 |
Q |
| |
|
| | ||| ||||||||||||||||||||||| |||| |||| ||||| ||||||| || | ||| ||||| || || ||||||||| || ||||||||| |
|
|
| T |
33860379 |
tacacctattcttgactgccacacctcccacgttgctgtcatgtttgttgagcttattgccaaggttgactggttttatggtaaggaaattgagaaggag |
33860280 |
T |
|
| Q |
2310 |
cctaaattcctgaagaatggagatgctggtattattaagatgattcccaccaagcccatggtggttgagactttctctgaatatcctccacttggccgtt |
2409 |
Q |
| |
|
||| ||||| |||||| ||| ||||||| | |||||||||||||||||||||||| |||||||| ||| |||| || | ||||||||||| ||||||| |
|
|
| T |
33860279 |
cctgaattcttgaagagtggtgatgctgctgctattaagatgattcccaccaagcctatggtggtagaggatttcgcttattatcctccactcggccgtt |
33860180 |
T |
|
| Q |
2410 |
ttgctgtcagagatatgcggcaaactgtggctgttgg |
2446 |
Q |
| |
|
||| || ||||| | ||| |||||||||||| |||| |
|
|
| T |
33860179 |
ttgttgcgagagacaggcgtcaaactgtggcttttgg |
33860143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 174; E-Value: 1e-92
Query Start/End: Original strand, 1088 - 1544
Target Start/End: Complemental strand, 33861504 - 33861045
Alignment:
| Q |
1088 |
aaaggttcacattaacattgttgtcattggccatgtcgactctgggaagtcaactaccactggtcacttgatctacaagcttggaggtattgacaagcgt |
1187 |
Q |
| |
|
|||| |||| ||||||||||| || ||||| ||||| ||||||||||||||||| || || ||||| ||| || ||||||||||| |||||||||||| | |
|
|
| T |
33861504 |
aaagtttcatattaacattgtggttattggtcatgttgactctgggaagtcaaccacaaccggtcatttgctccacaagcttggatgtattgacaagcat |
33861405 |
T |
|
| Q |
1188 |
gtgattgagaggtttgagaaagaagctgctgagatgaacaagcgttcattcaagtatgct---tgggttcttgacaagctcaaggctgagcgtgaaagag |
1284 |
Q |
| |
|
|| ||||| || ||||| ||||||||||| |||| ||||| ||||||||||||||||| |||||||||||||||||| |||||||||||||||||| |
|
|
| T |
33861404 |
gtcattgacagtcttgaggaagaagctgctcagatcgacaagtgttcattcaagtatgctaattgggttcttgacaagctcgaggctgagcgtgaaagag |
33861305 |
T |
|
| Q |
1285 |
gtatcacaattgacattgctctgtggaagtttgagaccactaagtactactgcactgtcattgatgcccctggacacagggatttcattaagaacatgat |
1384 |
Q |
| |
|
||||| | |||||| || || || | || |||||||| | ||||| | |||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
33861304 |
gtatctccattgacgtttctatgcgtaattttgagacaaaccagtaccggtacactgtcattgatgcccctggacacagggattatattaagaacatgat |
33861205 |
T |
|
| Q |
1385 |
tactggtacatcccaagctgattgtgctgttctcatcattgattccaccactggtggttttgaagctggtatttccaaggatggtcagactcgtgaacat |
1484 |
Q |
| |
|
|| ||| |||||| | |||||||| ||| |||| ||| |||||||| | ||||||||||||||| |||| |||| ||| |||||||||| ||||||||| |
|
|
| T |
33861204 |
taatgggacatcctatgctgattgcgctcttcttatcgttgattcctctcctggtggttttgaagttggtttttctaagcatggtcagacccgtgaacat |
33861105 |
T |
|
| Q |
1485 |
gctctccttgctttcactcttggtgtgaggcaaatgatctgctgctgcaacaaggtattt |
1544 |
Q |
| |
|
|| || || || | ||||||||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
33861104 |
gcccttctcgcctgcactcttggtgtgcctcaaatgatctgctgcatcaacaaggtattt |
33861045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 157; E-Value: 2e-82
Query Start/End: Original strand, 1717 - 2446
Target Start/End: Complemental strand, 34690884 - 34690149
Alignment:
| Q |
1717 |
ttggctataacccagataaaattccatttgttcccatctctggttttgagggagataacatgattgagcgctctacaaatcttgactggtacaagggtcc |
1816 |
Q |
| |
|
|||| |||||| ||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||| || || |||||||||||| | ||||| |
|
|
| T |
34690884 |
ttggttataacacagataaaattccatttgttcccatctctggttataagggagataacatcattgagcgctcgactaaccttgactggtacgaaggtcc |
34690785 |
T |
|
| Q |
1817 |
aacacttcttgaggctcttgatcaaatcaatgagcctaagaggccatcagacaagcccctccgactacctcttcaggatgtctacaagattggaggaatt |
1916 |
Q |
| |
|
|| |||||||| |||||||| |||||| | |||||||||||||| |||| |||||| | ||||||| ||||| ||||||||||||||||||| || |
|
|
| T |
34690784 |
tacccttcttgaagctcttgaccaaatcgacgagcctaagaggccttcaggcaagcctttgagactaccacttcaacatgtctacaagattggaggtgtt |
34690685 |
T |
|
| Q |
1917 |
ggaactgttcctgtgggacgtgttgagactggtaccatgaaacctggaatggtggtgacttttgctccaactggactgcaaactgaagtcaagtctgtgg |
2016 |
Q |
| |
|
|||||||| ||||| |||||||||||||||||| ||||||||||||||||| |||||||||| |||||||| |||||| ||| ||| ||||||||| |
|
|
| T |
34690684 |
ggaactgtacctgtcggacgtgttgagactggtgtgttgaaacctggaatggtgctgacttttgccccaactgggctgcaatctggagttaagtctgtgc |
34690585 |
T |
|
| Q |
2017 |
agatgcatcatgaatctctcactgaggcacttcccggtgacaatgtgggat------ttaatgttaagaatgtttctgtcaaggatctcaagcgtggtta |
2110 |
Q |
| |
|
|||||||||||||| ||| |||||| ||||| ||||| | |||||||| ||| |||||| | || | ||| |||| | ||| || || |
|
|
| T |
34690584 |
agatgcatcatgaaaacatcagtgaggcccttcctggtgatattgtgggattgcaccttacaaataagaaattgtccgataagaatcttaggcgaggcta |
34690485 |
T |
|
| Q |
2111 |
tgttgcctcaaacaccaaggatgacccagccaaggaggctgctaacttcacatctcaggtgattatcatgaatcaccctggccagattggaaatggttat |
2210 |
Q |
| |
|
|||||| ||| || ||||| |||| || |||| |||||||||||| || ||||||| || || || | || |||||| ||||| || || ||| |
|
|
| T |
34690484 |
tgttgcgtcagactccaagtatgaaccggccatggaggctgctaaatttacatctcgtgttatcgtctttaaccacccttcaaagattaccaaaggatat |
34690385 |
T |
|
| Q |
2211 |
gcccctgttcttgactgccacacctcccacattgcagtcaagtttgctgagcttgttactaagattgacaggcgttctggtaaggagatcgagaaggagc |
2310 |
Q |
| |
|
| ||||| |||||||||||| ||||||||| ||| |||||||||||| |||||||||| | | | || ||| || ||| ||| | |||||| ||| |
|
|
| T |
34690384 |
actcctgtccttgactgccacgcctcccacactgctgtcaagtttgctaagcttgttacgatgttcgatagggaatcaggtgtggaattggagaagaagc |
34690285 |
T |
|
| Q |
2311 |
ctaaattcctgaagaatggagatgctggtattattaagatgattcccaccaagcccatggtggttgagactttctctgaatatcctccacttggccgttt |
2410 |
Q |
| |
|
| | | |||||||||| ||||| | | || ||||||||||||| | || |||||||| || ||| | || ||||||||| | ||||||||||| |
|
|
| T |
34690284 |
ccatgtctttgaagaatggtgatgccgctgttgttaagatgattcctatgaaacccatggtcgtggagggtatcaatgaatatccatcccttggccgttt |
34690185 |
T |
|
| Q |
2411 |
tgctgtcagagatatgcggcaaactgtggctgttgg |
2446 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
34690184 |
tgctgtcagagacatgcgtcaaactgtggctgttgg |
34690149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 157; E-Value: 2e-82
Query Start/End: Original strand, 1717 - 2446
Target Start/End: Complemental strand, 34713296 - 34712561
Alignment:
| Q |
1717 |
ttggctataacccagataaaattccatttgttcccatctctggttttgagggagataacatgattgagcgctctacaaatcttgactggtacaagggtcc |
1816 |
Q |
| |
|
|||| |||||| ||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||| || || |||||||||||| | ||||| |
|
|
| T |
34713296 |
ttggttataacacagataaaattccatttgttcccatctctggttataagggagataacatcattgagcgctcgactaaccttgactggtacgaaggtcc |
34713197 |
T |
|
| Q |
1817 |
aacacttcttgaggctcttgatcaaatcaatgagcctaagaggccatcagacaagcccctccgactacctcttcaggatgtctacaagattggaggaatt |
1916 |
Q |
| |
|
|| |||||||| |||||||| |||||| | |||||||||||||| |||| |||||| | ||||||| ||||| ||||||||||||||||||| || |
|
|
| T |
34713196 |
tacccttcttgaagctcttgaccaaatcgacgagcctaagaggccttcaggcaagcctttgagactaccacttcaacatgtctacaagattggaggtgtt |
34713097 |
T |
|
| Q |
1917 |
ggaactgttcctgtgggacgtgttgagactggtaccatgaaacctggaatggtggtgacttttgctccaactggactgcaaactgaagtcaagtctgtgg |
2016 |
Q |
| |
|
|||||||| ||||| |||||||||||||||||| ||||||||||||||||| |||||||||| |||||||| |||||| ||| ||| ||||||||| |
|
|
| T |
34713096 |
ggaactgtacctgtcggacgtgttgagactggtgtgttgaaacctggaatggtgctgacttttgccccaactgggctgcaatctggagttaagtctgtgc |
34712997 |
T |
|
| Q |
2017 |
agatgcatcatgaatctctcactgaggcacttcccggtgacaatgtgggat------ttaatgttaagaatgtttctgtcaaggatctcaagcgtggtta |
2110 |
Q |
| |
|
|||||||||||||| ||| |||||| ||||| ||||| | |||||||| ||| |||||| | || | ||| |||| | ||| || || |
|
|
| T |
34712996 |
agatgcatcatgaaaacatcagtgaggcccttcctggtgatattgtgggattgcaccttacaaataagaaattgtccgataagaatcttaggcgaggcta |
34712897 |
T |
|
| Q |
2111 |
tgttgcctcaaacaccaaggatgacccagccaaggaggctgctaacttcacatctcaggtgattatcatgaatcaccctggccagattggaaatggttat |
2210 |
Q |
| |
|
|||||| ||| || ||||| |||| || |||| |||||||||||| || ||||||| || || || | || |||||| ||||| || || ||| |
|
|
| T |
34712896 |
tgttgcgtcagactccaagtatgaaccggccatggaggctgctaaatttacatctcgtgttatcgtctttaaccacccttcaaagattaccaaaggatat |
34712797 |
T |
|
| Q |
2211 |
gcccctgttcttgactgccacacctcccacattgcagtcaagtttgctgagcttgttactaagattgacaggcgttctggtaaggagatcgagaaggagc |
2310 |
Q |
| |
|
| ||||| |||||||||||| ||||||||| ||| |||||||||||| |||||||||| | | | || ||| || ||| ||| | |||||| ||| |
|
|
| T |
34712796 |
actcctgtccttgactgccacgcctcccacactgctgtcaagtttgctaagcttgttacgatgttcgatagggaatcaggtgtggaattggagaagaagc |
34712697 |
T |
|
| Q |
2311 |
ctaaattcctgaagaatggagatgctggtattattaagatgattcccaccaagcccatggtggttgagactttctctgaatatcctccacttggccgttt |
2410 |
Q |
| |
|
| | | |||||||||| ||||| | | || ||||||||||||| | || |||||||| || ||| | || ||||||||| | ||||||||||| |
|
|
| T |
34712696 |
ccatgtctttgaagaatggtgatgccgctgttgttaagatgattcctatgaaacccatggtcgtggagggtatcaatgaatatccatcccttggccgttt |
34712597 |
T |
|
| Q |
2411 |
tgctgtcagagatatgcggcaaactgtggctgttgg |
2446 |
Q |
| |
|
|||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
34712596 |
tgctgtcagagacatgcgtcaaactgtggctgttgg |
34712561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 99; E-Value: 7e-48
Query Start/End: Original strand, 1634 - 1948
Target Start/End: Complemental strand, 16232308 - 16231994
Alignment:
| Q |
1634 |
acagatggacgccactactcccaagtactccaagagcaggtatgatgaaattgtgaaggaagtatcatcctacatgaagaaggttggctataacccagat |
1733 |
Q |
| |
|
||||||| | |||||||| || || ||||||||| ||| ||||| | ||||||||||| ||| ||| || ||| || | |||| |||||| | ||| |
|
|
| T |
16232308 |
acagatgaatgccactacaccgaaatactccaaggacagatatgaagtaattgtgaagggagtttcacccgctttgacgaggattggttataacgctgat |
16232209 |
T |
|
| Q |
1734 |
aaaattccatttgttcccatctctggttttgagggagataacatgattgagcgctctacaaatcttgactggtacaagggtccaacacttcttgaggctc |
1833 |
Q |
| |
|
| ||||||||||||||||||||||||||| || |||||||||| ||||||||||||| || ||||||||||| | || || || ||| |||| ||| |
|
|
| T |
16232208 |
gatattccatttgttcccatctctggttttaagtgagataacatcgttgagcgctctactaaccttgactggtatgatgggcctacccttgttgaagcta |
16232109 |
T |
|
| Q |
1834 |
ttgatcaaatcaatgagcctaagaggccatcagacaagcccctccgactacctcttcaggatgtctacaagattggaggaattggaactgttcctgtggg |
1933 |
Q |
| |
|
|||| ||||||| |||||||||||||| || |||||| || ||||| || |||||| ||||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
16232108 |
ttgaccaaatcagcgagcctaagaggcccgaaggcaagcctctgcgacttccccttcagcatgtctacaagattggaggtattggaactgtacctgtggg |
16232009 |
T |
|
| Q |
1934 |
acgtgttgagactgg |
1948 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
16232008 |
acgtgttgagactgg |
16231994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 2320 - 2446
Target Start/End: Complemental strand, 16231616 - 16231490
Alignment:
| Q |
2320 |
tgaagaatggagatgctggtattattaagatgattcccaccaagcccatggtggttgagactttctctgaatatcctccacttggccgttttgctgtcag |
2419 |
Q |
| |
|
|||||||||| ||||| || ||| ||||||||||||| | ||||| |||||||| ||| | || |||||||||| | ||||| |||||||||||||| |
|
|
| T |
16231616 |
tgaagaatggtgatgcaggaattgttaagatgattcctatgaagcctatggtggtggagggtatcaatgaatatccttcccttggtcgttttgctgtcag |
16231517 |
T |
|
| Q |
2420 |
agatatgcggcaaactgtggctgttgg |
2446 |
Q |
| |
|
||| ||||| ||||||||||||||||| |
|
|
| T |
16231516 |
agacatgcgtcaaactgtggctgttgg |
16231490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 73; Significance: 2e-32; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 73; E-Value: 2e-32
Query Start/End: Original strand, 1708 - 1828
Target Start/End: Original strand, 39242502 - 39242622
Alignment:
| Q |
1708 |
tgaagaaggttggctataacccagataaaattccatttgttcccatctctggttttgagggagataacatgattgagcgctctacaaatcttgactggta |
1807 |
Q |
| |
|
||||||||||||||||||||||||| |||| || |||||||||||||||||||||| | ||||||||| |||||||||||||||| ||| |||||||||| |
|
|
| T |
39242502 |
tgaagaaggttggctataacccagacaaaactcgatttgttcccatctctggttttaacggagataacttgattgagcgctctactaatattgactggta |
39242601 |
T |
|
| Q |
1808 |
caagggtccaacacttcttga |
1828 |
Q |
| |
|
||| |||| || |||||||| |
|
|
| T |
39242602 |
caacagtcccacccttcttga |
39242622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-17
Query Start/End: Original strand, 1288 - 1370
Target Start/End: Original strand, 39242152 - 39242237
Alignment:
| Q |
1288 |
tcacaattgacattgctctgtggaagtttgagaccactaagtactactgcactgtcat---tgatgcccctggacacagggatttc |
1370 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| || |||||||||||||||||||| ||||||| ||||| ||||||||||| |
|
|
| T |
39242152 |
tcacaattgacattgctctgtccaagtttgagacaacaaagtactactgcactgtcattgatgatgcctctggagacagggatttc |
39242237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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