View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3455_low_3 (Length: 2847)

Name: NF3455_low_3
Description: NF3455
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3455_low_3
NF3455_low_3
[»] chr8 (88 HSPs)
chr8 (1243-2626)||(10410821-10412178)
chr8 (458-1237)||(10410019-10410792)
chr8 (18-186)||(10409701-10409870)
chr8 (2710-2830)||(10412262-10412382)
chr8 (456-677)||(32513947-32514168)
chr8 (458-601)||(36063414-36063557)
chr8 (458-601)||(25101940-25102083)
chr8 (458-604)||(42499356-42499501)
chr8 (458-585)||(5695907-5696034)
chr8 (458-601)||(35369360-35369503)
chr8 (458-628)||(42024204-42024372)
chr8 (458-587)||(21135493-21135622)
chr8 (458-601)||(5250368-5250511)
chr8 (458-601)||(8784748-8784891)
chr8 (458-585)||(36470819-36470946)
chr8 (458-585)||(44265618-44265745)
chr8 (458-594)||(6018209-6018345)
chr8 (458-585)||(23483514-23483641)
chr8 (458-601)||(27875425-27875568)
chr8 (458-601)||(28015606-28015749)
chr8 (20-102)||(32615801-32615883)
chr8 (458-588)||(35863211-35863341)
chr8 (458-588)||(41281293-41281423)
chr8 (456-601)||(33322701-33322846)
chr8 (458-601)||(17842634-17842776)
chr8 (458-589)||(18839908-18840039)
chr8 (458-601)||(24451654-24451797)
chr8 (20-117)||(13521770-13521867)
chr8 (106-184)||(32244603-32244682)
chr8 (458-601)||(37967706-37967850)
chr8 (106-184)||(44894616-44894695)
chr8 (20-102)||(13611305-13611387)
chr8 (458-601)||(30968834-30968977)
chr8 (370-428)||(33274315-33274373)
chr8 (458-601)||(37706702-37706844)
chr8 (474-585)||(38706437-38706548)
chr8 (458-601)||(39337150-39337293)
chr8 (456-625)||(28701622-28701793)
chr8 (458-585)||(6590435-6590563)
chr8 (458-601)||(5765694-5765837)
chr8 (1157-1223)||(10412258-10412324)
chr8 (458-527)||(3865863-3865932)
chr8 (458-527)||(6244226-6244295)
chr8 (458-527)||(17062417-17062486)
chr8 (458-527)||(17585872-17585941)
chr8 (458-584)||(41590334-41590459)
chr8 (378-433)||(404438-404493)
chr8 (20-106)||(29912102-29912186)
chr8 (456-527)||(32243847-32243918)
chr8 (639-686)||(44265798-44265845)
chr8 (458-527)||(6243643-6243713)
chr8 (2710-2772)||(10410716-10410778)
chr8 (543-601)||(12469454-12469512)
chr8 (458-588)||(16473152-16473283)
chr8 (458-588)||(16477723-16477854)
chr8 (458-532)||(17498541-17498615)
chr8 (543-601)||(30658433-30658491)
chr8 (458-528)||(43988206-43988276)
chr8 (106-186)||(32243687-32243768)
chr8 (106-186)||(32514247-32514328)
chr8 (458-587)||(36910510-36910637)
chr8 (106-184)||(3865701-3865780)
chr8 (106-182)||(3866599-3866677)
chr8 (387-430)||(23737004-23737047)
chr8 (110-176)||(28701866-28701933)
chr8 (106-180)||(30658647-30658721)
chr8 (20-102)||(42964751-42964832)
chr8 (540-582)||(43936513-43936555)
chr8 (34-79)||(12189611-12189656)
chr8 (34-79)||(12434039-12434084)
chr8 (458-527)||(28755227-28755296)
chr8 (20-105)||(41570004-41570089)
chr8 (106-186)||(42024452-42024533)
chr8 (638-683)||(42499277-42499322)
chr8 (458-527)||(44894466-44894535)
chr8 (23-107)||(14548230-14548313)
chr8 (543-599)||(18304646-18304702)
chr8 (388-427)||(12398132-12398171)
chr8 (39-102)||(15546744-15546807)
chr8 (387-430)||(18310574-18310617)
chr8 (456-495)||(23762884-23762923)
chr8 (369-428)||(40330136-40330195)
chr8 (638-684)||(2827159-2827205)
chr8 (638-684)||(6590615-6590661)
chr8 (638-684)||(30806236-30806282)
chr8 (638-684)||(33322882-33322928)
chr8 (20-94)||(34085294-34085367)
chr8 (638-684)||(37967885-37967931)
[»] chr7 (65 HSPs)
chr7 (458-682)||(10463196-10463416)
chr7 (458-601)||(6331068-6331211)
chr7 (458-601)||(37539958-37540101)
chr7 (458-684)||(7238474-7238699)
chr7 (458-601)||(38159124-38159267)
chr7 (458-591)||(22378448-22378581)
chr7 (458-585)||(4926547-4926674)
chr7 (458-601)||(46044271-46044414)
chr7 (458-588)||(44167787-44167917)
chr7 (458-601)||(43083835-43083978)
chr7 (458-601)||(43597464-43597607)
chr7 (456-584)||(6588857-6588985)
chr7 (458-589)||(47792010-47792141)
chr7 (458-601)||(18059178-18059318)
chr7 (458-601)||(35482039-35482180)
chr7 (458-601)||(3495815-3495958)
chr7 (482-601)||(4899844-4899963)
chr7 (458-585)||(14990544-14990670)
chr7 (458-585)||(15420155-15420281)
chr7 (458-601)||(38199221-38199363)
chr7 (458-588)||(10620513-10620643)
chr7 (106-184)||(8081817-8081896)
chr7 (106-182)||(1066611-1066688)
chr7 (458-601)||(27727206-27727351)
chr7 (458-526)||(1065863-1065931)
chr7 (458-591)||(1962070-1962203)
chr7 (456-527)||(37107849-37107920)
chr7 (458-529)||(42974159-42974230)
chr7 (458-593)||(47139724-47139860)
chr7 (458-588)||(33624959-33625087)
chr7 (370-428)||(36783284-36783342)
chr7 (106-186)||(37108604-37108683)
chr7 (106-179)||(38593284-38593358)
chr7 (462-519)||(1260315-1260372)
chr7 (458-527)||(12621627-12621696)
chr7 (542-601)||(29155942-29156001)
chr7 (106-184)||(42974314-42974393)
chr7 (456-588)||(43574410-43574542)
chr7 (458-588)||(9633162-9633292)
chr7 (458-527)||(8081977-8082046)
chr7 (458-527)||(8832881-8832950)
chr7 (540-601)||(11396938-11396999)
chr7 (458-527)||(38594685-38594754)
chr7 (458-556)||(46330971-46331069)
chr7 (638-686)||(1544372-1544420)
chr7 (637-684)||(28924843-28924890)
chr7 (479-582)||(15652795-15652898)
chr7 (546-588)||(16080772-16080814)
chr7 (370-428)||(23031791-23031849)
chr7 (378-428)||(32948332-32948382)
chr7 (458-532)||(36019811-36019885)
chr7 (369-430)||(2457972-2458033)
chr7 (106-146)||(12621817-12621858)
chr7 (106-146)||(38595238-38595279)
chr7 (106-146)||(40304435-40304476)
chr7 (540-601)||(45958706-45958767)
chr7 (540-588)||(1544468-1544516)
chr7 (106-184)||(8832718-8832798)
chr7 (456-495)||(2510738-2510777)
chr7 (456-495)||(28642551-28642590)
chr7 (637-684)||(44081297-44081344)
chr7 (638-684)||(10620418-10620464)
chr7 (638-684)||(18059353-18059399)
chr7 (638-684)||(27727123-27727169)
chr7 (638-684)||(47792197-47792243)
[»] chr1 (86 HSPs)
chr1 (456-684)||(48410314-48410541)
chr1 (458-601)||(30719652-30719795)
chr1 (458-601)||(2059517-2059659)
chr1 (458-601)||(12368223-12368366)
chr1 (458-601)||(33708925-33709068)
chr1 (458-601)||(37986724-37986867)
chr1 (458-588)||(5430557-5430687)
chr1 (458-571)||(51561357-51561470)
chr1 (460-599)||(21794508-21794647)
chr1 (458-585)||(26020395-26020522)
chr1 (458-601)||(36248496-36248639)
chr1 (458-601)||(11999890-12000033)
chr1 (458-588)||(52493700-52493831)
chr1 (458-588)||(30982375-30982505)
chr1 (458-572)||(13501378-13501490)
chr1 (458-601)||(36367870-36368013)
chr1 (458-585)||(46517168-46517295)
chr1 (458-588)||(7565172-7565302)
chr1 (106-186)||(12251572-12251653)
chr1 (369-430)||(35652478-35652539)
chr1 (458-527)||(52882362-52882431)
chr1 (458-593)||(26805479-26805615)
chr1 (456-684)||(33707267-33707495)
chr1 (458-585)||(43504939-43505066)
chr1 (458-527)||(12897145-12897214)
chr1 (458-527)||(25352126-25352195)
chr1 (106-186)||(27550803-27550884)
chr1 (456-601)||(35530956-35531101)
chr1 (458-588)||(46596769-46596899)
chr1 (106-186)||(48218054-48218135)
chr1 (369-428)||(10987196-10987255)
chr1 (106-184)||(11397042-11397121)
chr1 (106-184)||(25351966-25352045)
chr1 (456-582)||(10041239-10041365)
chr1 (458-527)||(12251422-12251491)
chr1 (458-584)||(19791411-19791536)
chr1 (458-527)||(27551563-27551632)
chr1 (106-176)||(48410130-48410202)
chr1 (458-519)||(49767858-49767919)
chr1 (458-527)||(52881760-52881829)
chr1 (456-572)||(6216384-6216503)
chr1 (479-588)||(39681988-39682097)
chr1 (373-424)||(47949991-47950042)
chr1 (458-508)||(28701127-28701177)
chr1 (547-601)||(29231368-29231422)
chr1 (378-423)||(23452981-23453026)
chr1 (106-186)||(49767696-49767777)
chr1 (370-414)||(21008245-21008289)
chr1 (18-102)||(26761230-26761314)
chr1 (24-96)||(44698002-44698074)
chr1 (18-102)||(49806030-49806114)
chr1 (638-686)||(52493880-52493928)
chr1 (20-95)||(7444887-7444962)
chr1 (638-685)||(26020297-26020344)
chr1 (18-106)||(27262805-27262897)
chr1 (369-428)||(36438433-36438492)
chr1 (370-417)||(47446024-47446071)
chr1 (371-426)||(47449226-47449281)
chr1 (638-672)||(2059697-2059731)
chr1 (369-427)||(11908588-11908646)
chr1 (106-171)||(51339817-51339883)
chr1 (106-171)||(51841222-51841288)
chr1 (458-524)||(52010035-52010101)
chr1 (378-423)||(7789446-7789491)
chr1 (369-414)||(10101246-10101291)
chr1 (458-519)||(11397204-11397265)
chr1 (106-146)||(25352690-25352731)
chr1 (369-410)||(30322017-30322058)
chr1 (458-527)||(47008701-47008769)
chr1 (59-108)||(47019070-47019119)
chr1 (370-423)||(50075635-50075688)
chr1 (384-428)||(12570102-12570146)
chr1 (456-495)||(7603784-7603823)
chr1 (106-184)||(12897296-12897375)
chr1 (474-525)||(20357123-20357174)
chr1 (474-525)||(20562781-20562832)
chr1 (456-495)||(25136942-25136981)
chr1 (106-184)||(27551701-27551780)
chr1 (378-428)||(1607394-1607444)
chr1 (20-102)||(2571053-2571135)
chr1 (638-684)||(26805389-26805435)
chr1 (20-78)||(31963055-31963113)
chr1 (638-672)||(46517081-46517115)
chr1 (638-684)||(47008574-47008620)
chr1 (378-427)||(47176789-47176839)
chr1 (20-82)||(52698418-52698480)
[»] chr6 (50 HSPs)
chr6 (458-684)||(3375462-3375687)
chr6 (458-599)||(1821151-1821292)
chr6 (458-601)||(10915475-10915618)
chr6 (458-601)||(26356703-26356846)
chr6 (458-601)||(30660951-30661094)
chr6 (458-601)||(844279-844422)
chr6 (458-601)||(29691891-29692034)
chr6 (456-601)||(12481924-12482070)
chr6 (458-593)||(17245752-17245887)
chr6 (458-601)||(8710007-8710150)
chr6 (458-591)||(17697376-17697509)
chr6 (458-601)||(34046558-34046702)
chr6 (458-601)||(5087170-5087313)
chr6 (458-601)||(5974289-5974432)
chr6 (458-601)||(15721042-15721188)
chr6 (461-601)||(20897791-20897933)
chr6 (456-581)||(30492879-30493004)
chr6 (458-601)||(861338-861481)
chr6 (458-601)||(18502972-18503115)
chr6 (458-586)||(939016-939144)
chr6 (106-184)||(21108273-21108352)
chr6 (456-601)||(28476167-28476316)
chr6 (20-102)||(24396836-24396918)
chr6 (106-186)||(289008-289089)
chr6 (458-527)||(3914476-3914545)
chr6 (458-601)||(30353106-30353250)
chr6 (458-572)||(33744671-33744785)
chr6 (456-514)||(30916768-30916826)
chr6 (106-186)||(289563-289644)
chr6 (20-85)||(9049969-9050034)
chr6 (458-527)||(21108121-21108190)
chr6 (458-510)||(14256221-14256273)
chr6 (460-601)||(20977537-20977678)
chr6 (458-601)||(5079486-5079630)
chr6 (542-589)||(16736644-16736691)
chr6 (638-684)||(5087090-5087136)
chr6 (638-684)||(10915657-10915703)
chr6 (638-684)||(20897709-20897755)
chr6 (18-79)||(2817225-2817286)
chr6 (106-186)||(3914626-3914706)
chr6 (540-601)||(20977251-20977312)
chr6 (369-425)||(1288154-1288210)
chr6 (458-510)||(2087609-2087661)
chr6 (458-510)||(20510651-20510703)
chr6 (39-102)||(6420311-6420374)
chr6 (638-684)||(30493060-30493106)
chr6 (18-84)||(31597584-31597650)
chr6 (378-428)||(32604569-32604619)
chr6 (458-532)||(33518406-33518479)
chr6 (106-186)||(33518559-33518641)
[»] scaffold0024 (2 HSPs)
scaffold0024 (456-684)||(47749-47976)
scaffold0024 (542-684)||(32861-33002)
[»] chr5 (79 HSPs)
chr5 (458-684)||(10674813-10675038)
chr5 (467-684)||(32510329-32510546)
chr5 (458-601)||(10463909-10464052)
chr5 (458-601)||(27335802-27335945)
chr5 (458-601)||(4426194-4426337)
chr5 (458-601)||(8337015-8337157)
chr5 (458-684)||(9687429-9687654)
chr5 (458-601)||(8404374-8404518)
chr5 (458-585)||(17742498-17742625)
chr5 (458-588)||(8218004-8218134)
chr5 (477-684)||(22022995-22023201)
chr5 (458-665)||(27307991-27308197)
chr5 (458-601)||(1683145-1683288)
chr5 (458-588)||(38693459-38693589)
chr5 (456-601)||(34785230-34785375)
chr5 (18-102)||(40323823-40323907)
chr5 (458-601)||(621606-621749)
chr5 (458-601)||(8313381-8313523)
chr5 (458-588)||(24636931-24637062)
chr5 (458-601)||(34010094-34010237)
chr5 (458-588)||(13920235-13920365)
chr5 (458-588)||(21837111-21837241)
chr5 (461-684)||(37103207-37103428)
chr5 (456-601)||(14049735-14049880)
chr5 (458-601)||(34527189-34527333)
chr5 (458-601)||(4461942-4462085)
chr5 (457-684)||(27280327-27280550)
chr5 (458-588)||(43440866-43440996)
chr5 (369-428)||(35563122-35563181)
chr5 (458-582)||(40158437-40158560)
chr5 (106-184)||(40272467-40272546)
chr5 (458-572)||(41139197-41139312)
chr5 (106-186)||(2262997-2263078)
chr5 (540-601)||(31211443-31211504)
chr5 (458-527)||(43210680-43210749)
chr5 (18-89)||(9784448-9784519)
chr5 (458-585)||(4462928-4463055)
chr5 (458-601)||(26865686-26865829)
chr5 (20-102)||(41174367-41174449)
chr5 (456-684)||(36876024-36876250)
chr5 (458-527)||(41193030-41193099)
chr5 (559-685)||(11154716-11154840)
chr5 (460-527)||(9168605-9168672)
chr5 (106-184)||(19332471-19332550)
chr5 (106-176)||(37812681-37812752)
chr5 (106-182)||(10674651-10674728)
chr5 (458-527)||(19332633-19332702)
chr5 (108-180)||(43209905-43209978)
chr5 (540-588)||(18950862-18950910)
chr5 (638-686)||(24636835-24636883)
chr5 (456-527)||(2262847-2262918)
chr5 (20-103)||(19608741-19608823)
chr5 (106-180)||(43210836-43210911)
chr5 (639-681)||(314766-314808)
chr5 (638-684)||(9924584-9924630)
chr5 (638-684)||(17742678-17742724)
chr5 (370-428)||(17904315-17904373)
chr5 (458-585)||(28456680-28456807)
chr5 (543-601)||(37446657-37446715)
chr5 (543-601)||(42877592-42877650)
chr5 (39-92)||(4613063-4613116)
chr5 (458-527)||(9924413-9924482)
chr5 (466-527)||(18261232-18261293)
chr5 (639-684)||(30698579-30698624)
chr5 (639-684)||(30733854-30733899)
chr5 (106-181)||(32537607-32537684)
chr5 (106-146)||(37812998-37813039)
chr5 (106-146)||(42645137-42645178)
chr5 (458-510)||(2005196-2005248)
chr5 (106-184)||(9687708-9687788)
chr5 (369-417)||(41174192-41174240)
chr5 (638-686)||(42645235-42645283)
chr5 (458-525)||(30733980-30734047)
chr5 (20-102)||(1863069-1863151)
chr5 (106-186)||(2003962-2004044)
chr5 (638-684)||(4463110-4463156)
chr5 (378-424)||(11936053-11936099)
chr5 (458-524)||(22166931-22166997)
chr5 (541-587)||(28616019-28616065)
[»] chr4 (71 HSPs)
chr4 (458-601)||(53323947-53324090)
chr4 (458-684)||(38499459-38499685)
chr4 (462-601)||(7617398-7617537)
chr4 (458-601)||(11670278-11670421)
chr4 (458-601)||(22068269-22068412)
chr4 (458-601)||(25422238-25422381)
chr4 (458-601)||(33177401-33177544)
chr4 (458-599)||(30331260-30331401)
chr4 (456-601)||(53571522-53571667)
chr4 (460-601)||(55938242-55938382)
chr4 (458-585)||(47309606-47309733)
chr4 (458-601)||(1870278-1870420)
chr4 (458-585)||(3873148-3873275)
chr4 (474-601)||(28448371-28448498)
chr4 (458-587)||(44209489-44209618)
chr4 (458-588)||(31316712-31316843)
chr4 (458-572)||(19522884-19522998)
chr4 (458-588)||(33689286-33689416)
chr4 (370-426)||(27574587-27574643)
chr4 (458-684)||(20650402-20650627)
chr4 (369-427)||(17354487-17354545)
chr4 (458-601)||(23473458-23473600)
chr4 (370-428)||(40293574-40293632)
chr4 (458-572)||(43938174-43938289)
chr4 (18-107)||(8753072-8753161)
chr4 (29-106)||(26009752-26009829)
chr4 (458-527)||(44452257-44452326)
chr4 (458-601)||(7490864-7491008)
chr4 (106-184)||(34513223-34513302)
chr4 (369-427)||(6942266-6942324)
chr4 (458-572)||(44289850-44289964)
chr4 (540-601)||(51395592-51395653)
chr4 (541-601)||(38114217-38114277)
chr4 (458-588)||(53423556-53423688)
chr4 (458-601)||(10321867-10322010)
chr4 (458-588)||(13603954-13604084)
chr4 (464-601)||(3862468-3862606)
chr4 (464-601)||(3871225-3871363)
chr4 (540-686)||(13717890-13718035)
chr4 (458-527)||(28163779-28163848)
chr4 (458-527)||(34513072-34513141)
chr4 (106-186)||(38499298-38499379)
chr4 (106-186)||(44452096-44452177)
chr4 (369-426)||(48818500-48818557)
chr4 (639-684)||(55283460-55283505)
chr4 (458-510)||(47379247-47379299)
chr4 (369-428)||(6942496-6942555)
chr4 (20-107)||(23568056-23568143)
chr4 (106-184)||(28163929-28164007)
chr4 (378-425)||(42600696-42600743)
chr4 (370-420)||(2075184-2075234)
chr4 (458-601)||(4850266-4850409)
chr4 (638-684)||(22068449-22068495)
chr4 (370-428)||(33977817-33977875)
chr4 (369-426)||(19594468-19594525)
chr4 (106-146)||(28163241-28163282)
chr4 (106-146)||(34512548-34512589)
chr4 (540-585)||(42972730-42972775)
chr4 (106-146)||(48738518-48738559)
chr4 (638-686)||(7499093-7499141)
chr4 (541-601)||(10085739-10085799)
chr4 (458-513)||(35351732-35351788)
chr4 (458-506)||(38114287-38114335)
chr4 (378-421)||(7162263-7162306)
chr4 (458-505)||(35060902-35060949)
chr4 (458-525)||(48219943-48220010)
chr4 (637-684)||(52947660-52947707)
chr4 (458-524)||(52947818-52947885)
chr4 (378-424)||(2720532-2720578)
chr4 (638-684)||(28448288-28448334)
chr4 (497-527)||(35351686-35351716)
[»] chr2 (66 HSPs)
chr2 (458-588)||(14200957-14201087)
chr2 (458-601)||(20721209-20721352)
chr2 (458-589)||(31771488-31771619)
chr2 (458-588)||(18672363-18672493)
chr2 (458-588)||(43932727-43932857)
chr2 (458-603)||(42274279-42274424)
chr2 (458-601)||(3043341-3043484)
chr2 (458-593)||(10357487-10357622)
chr2 (458-582)||(13371994-13372118)
chr2 (462-582)||(33031226-33031346)
chr2 (458-585)||(7439392-7439519)
chr2 (458-584)||(31436209-31436335)
chr2 (463-601)||(44286664-44286802)
chr2 (456-601)||(21439812-21439957)
chr2 (458-587)||(44493056-44493185)
chr2 (459-603)||(41120910-41121054)
chr2 (458-588)||(40364877-40365007)
chr2 (369-428)||(9707134-9707193)
chr2 (369-428)||(43592743-43592802)
chr2 (458-585)||(8737807-8737934)
chr2 (106-186)||(32318226-32318308)
chr2 (458-527)||(3118146-3118214)
chr2 (458-511)||(29809400-29809453)
chr2 (458-572)||(33832133-33832246)
chr2 (20-96)||(11074566-11074642)
chr2 (458-529)||(32318995-32319067)
chr2 (106-184)||(9111579-9111658)
chr2 (369-428)||(9886839-9886898)
chr2 (43-102)||(11069700-11069759)
chr2 (458-601)||(42487648-42487792)
chr2 (481-568)||(3118645-3118732)
chr2 (458-585)||(44879714-44879841)
chr2 (106-186)||(3117984-3118065)
chr2 (540-585)||(25100838-25100883)
chr2 (106-186)||(32319148-32319229)
chr2 (18-98)||(8741038-8741118)
chr2 (456-572)||(13027451-13027568)
chr2 (458-601)||(20720120-20720256)
chr2 (458-506)||(30784356-30784404)
chr2 (540-584)||(35498806-35498850)
chr2 (134-182)||(44286887-44286935)
chr2 (385-428)||(35813786-35813829)
chr2 (369-427)||(7721628-7721686)
chr2 (638-684)||(8737725-8737771)
chr2 (638-684)||(13371893-13371939)
chr2 (385-426)||(4283491-4283532)
chr2 (540-585)||(29809250-29809295)
chr2 (458-527)||(32318389-32318458)
chr2 (369-429)||(8335278-8335338)
chr2 (386-426)||(33441823-33441863)
chr2 (458-506)||(37592954-37593002)
chr2 (58-102)||(38788710-38788754)
chr2 (369-425)||(43664850-43664906)
chr2 (460-519)||(23496734-23496793)
chr2 (392-426)||(433649-433683)
chr2 (456-494)||(6751292-6751330)
chr2 (638-684)||(7439571-7439617)
chr2 (458-524)||(8392382-8392448)
chr2 (638-676)||(10357229-10357267)
chr2 (106-186)||(10357325-10357407)
chr2 (638-684)||(10357667-10357713)
chr2 (369-415)||(28226222-28226268)
chr2 (106-186)||(30784195-30784277)
chr2 (638-684)||(33031366-33031412)
chr2 (638-684)||(33832022-33832068)
chr2 (106-186)||(41120748-41120830)
[»] scaffold1160 (1 HSPs)
scaffold1160 (458-601)||(1332-1475)
[»] chr3 (68 HSPs)
chr3 (458-601)||(45419765-45419908)
chr3 (458-601)||(32943158-32943301)
chr3 (458-601)||(50615064-50615207)
chr3 (458-601)||(44808819-44808963)
chr3 (458-571)||(25250186-25250299)
chr3 (458-601)||(11293966-11294109)
chr3 (458-603)||(37179113-37179259)
chr3 (458-584)||(53517781-53517907)
chr3 (461-601)||(117427-117567)
chr3 (458-601)||(11045576-11045718)
chr3 (458-601)||(29348445-29348587)
chr3 (458-527)||(8575955-8576024)
chr3 (18-115)||(12402284-12402381)
chr3 (458-588)||(27492486-27492616)
chr3 (106-186)||(44555927-44556008)
chr3 (458-572)||(45406835-45406949)
chr3 (458-583)||(23921073-23921196)
chr3 (458-594)||(23883377-23883513)
chr3 (106-184)||(33475479-33475558)
chr3 (456-527)||(33476243-33476314)
chr3 (458-524)||(34995702-34995768)
chr3 (458-601)||(38174074-38174217)
chr3 (458-585)||(40762596-40762723)
chr3 (458-593)||(44557567-44557702)
chr3 (458-527)||(41927430-41927499)
chr3 (458-527)||(44556689-44556758)
chr3 (458-588)||(45235337-45235467)
chr3 (456-684)||(54268752-54268970)
chr3 (459-527)||(31991240-31991308)
chr3 (18-102)||(43767255-43767339)
chr3 (24-107)||(15496204-15496287)
chr3 (106-184)||(52701171-52701250)
chr3 (481-568)||(8575373-8575460)
chr3 (458-561)||(32147168-32147271)
chr3 (458-572)||(46295225-46295339)
chr3 (458-527)||(52701333-52701402)
chr3 (458-509)||(44287839-44287890)
chr3 (458-527)||(25232828-25232898)
chr3 (106-182)||(41928045-41928123)
chr3 (540-601)||(23917574-23917635)
chr3 (458-572)||(39562558-39562672)
chr3 (458-510)||(9018192-9018244)
chr3 (370-426)||(12790113-12790169)
chr3 (384-428)||(52247423-52247467)
chr3 (43-102)||(9596270-9596329)
chr3 (638-672)||(11294143-11294177)
chr3 (106-179)||(31991077-31991151)
chr3 (20-102)||(54457440-54457522)
chr3 (461-510)||(21749741-21749790)
chr3 (106-146)||(33476433-33476474)
chr3 (370-431)||(34819731-34819792)
chr3 (106-169)||(8576124-8576188)
chr3 (458-510)||(19601721-19601773)
chr3 (458-510)||(53377438-53377490)
chr3 (106-184)||(53517989-53518069)
chr3 (637-684)||(19601901-19601948)
chr3 (106-144)||(31991925-31991964)
chr3 (385-432)||(47068765-47068812)
chr3 (637-683)||(15771802-15771848)
chr3 (384-443)||(21758250-21758310)
chr3 (126-184)||(25232687-25232745)
chr3 (370-432)||(28958627-28958689)
chr3 (28-102)||(29577343-29577417)
chr3 (369-415)||(33641001-33641047)
chr3 (384-430)||(33967935-33967981)
chr3 (458-524)||(41927896-41927962)
chr3 (638-684)||(53377617-53377663)
chr3 (458-532)||(53439483-53439556)
[»] scaffold0125 (1 HSPs)
scaffold0125 (460-588)||(21743-21871)
[»] scaffold0445 (1 HSPs)
scaffold0445 (458-601)||(5897-6040)
[»] scaffold0097 (2 HSPs)
scaffold0097 (458-601)||(25037-25180)
scaffold0097 (458-601)||(23958-24094)
[»] scaffold0003 (1 HSPs)
scaffold0003 (458-601)||(239992-240135)
[»] scaffold1190 (2 HSPs)
scaffold1190 (456-585)||(198-328)
scaffold1190 (638-684)||(100-146)
[»] scaffold0148 (1 HSPs)
scaffold0148 (456-601)||(35443-35588)
[»] scaffold0562 (1 HSPs)
scaffold0562 (458-585)||(3967-4094)
[»] scaffold1191 (1 HSPs)
scaffold1191 (458-601)||(840-984)
[»] scaffold0651 (1 HSPs)
scaffold0651 (458-588)||(6855-6986)
[»] scaffold0051 (1 HSPs)
scaffold0051 (458-588)||(52521-52652)
[»] scaffold0005 (3 HSPs)
scaffold0005 (106-186)||(282943-283024)
scaffold0005 (458-517)||(283301-283360)
scaffold0005 (106-146)||(283481-283522)
[»] scaffold0001 (1 HSPs)
scaffold0001 (458-585)||(158024-158150)
[»] scaffold0571 (2 HSPs)
scaffold0571 (458-601)||(8624-8768)
scaffold0571 (638-684)||(8802-8848)
[»] scaffold0036 (1 HSPs)
scaffold0036 (458-601)||(17357-17499)
[»] scaffold0074 (1 HSPs)
scaffold0074 (20-102)||(29756-29838)
[»] scaffold0640 (1 HSPs)
scaffold0640 (458-572)||(3901-4015)
[»] scaffold0627 (1 HSPs)
scaffold0627 (458-588)||(7104-7234)
[»] scaffold0514 (2 HSPs)
scaffold0514 (474-558)||(6197-6281)
scaffold0514 (638-684)||(6079-6125)
[»] scaffold0385 (1 HSPs)
scaffold0385 (546-601)||(9940-9995)
[»] scaffold0129 (1 HSPs)
scaffold0129 (369-428)||(37460-37519)
[»] scaffold0014 (1 HSPs)
scaffold0014 (456-568)||(123198-123310)
[»] scaffold0011 (1 HSPs)
scaffold0011 (456-495)||(235488-235527)
[»] scaffold0809 (1 HSPs)
scaffold0809 (642-684)||(655-697)
[»] scaffold0707 (2 HSPs)
scaffold0707 (458-532)||(6950-7023)
scaffold0707 (106-186)||(7103-7185)
[»] scaffold0172 (1 HSPs)
scaffold0172 (385-423)||(26073-26111)


Alignment Details
Target: chr8 (Bit Score: 1215; Significance: 0; HSPs: 88)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 1215; E-Value: 0
Query Start/End: Original strand, 1243 - 2626
Target Start/End: Original strand, 10410821 - 10412178
Alignment:
Q  1243 aattaatgatgaaagataagaaatgttatattcctacagcaggaaccttgtcatcttagtcttcaacaggaatgataacttgcataacaagtaatctcta 1342  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |    
T  10410821 aattaatgatgaaagataagaaatgttatactccttcagcaggaaccttgtcatcttagtcttcaacaggaatgataacttgcataacaagtaatct--a 10410918  T
Q  1343 aaagcaggaatgatatcagcaaattatgagagatgttccaatgaaaatttgtgatataatcactcacatatgtgggaagaatactcataacatcagaatt 1442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10410919 aaagcaggaatgatatcagcaaattatgagagatgttccaatgaaaatttgtgatataatcactcacatatgtgggaagaatactcataacatcagaatt 10411018  T
Q  1443 caaatttagagtttttgtaaggggtcccgcatcaagagtcttgccatgtgtttgctatttccaattaaccaggtagaattctcaacaatagtcacaaatt 1542  Q
    |||||||                    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10411019 caaattt--------------------cgcatcaagagtcttgccatgtgtttgctatttccaattaaccaggtagaattctcaacaatagtcacaaatt 10411098  T
Q  1543 ctgctttgacattagtcctaaactcttaaccaagagaataaaaggactaaacaacccttagcatagttattagaaaaagaaaaagtctataacaataact 1642  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10411099 ctgctttgacattagtccaaaactcttaaccaagagaataaaaggagtaaacaacccttagcatagttattagaaaaagaaaaagtctataacaataact 10411198  T
Q  1643 aacaactctataacatataatctaagactaattatgccagctaggaagcaaattgtttgaatagaagcatgcaaataaaaccaagcgggatcccgttgct 1742  Q
    || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10411199 aataactctataacatataatctaagactaattatgccagctaggaagtaaattgtttgaatagaagcatgcaaataaaaccaagcgggatcccgttgct 10411298  T
Q  1743 tgaaataacggtaaattatggatccgagtatcatcagagtggtccatcctgcactctgcagaatgccatgccttcttcttcgaacttttgggttacaatt 1842  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10411299 tgaaataacgataaattatggatccgagtatcattagagtggtccatcctgcactctgcagaatgccatgccttcttcttggaacttttgggttacaatt 10411398  T
Q  1843 tctcttaattattttacctgtttcaagaaataatattcagattgcagtcattttaacaaaacactaattaactgtgaagacaatctacataatgaaaagc 1942  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  10411399 tctcttaattattttacctgtttcaagatataatattcagattgcagtcattttaacaaaacactaattaactgtgaagacaatctacataatgaaaaac 10411498  T
Q  1943 ttatataaatgcaaaattgactaaccttttgaataatctatgaccaatgatatgtgaccgctatgtttggacaaggcatagtcaggataattaggaaata 2042  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10411499 ttatataaatgcaaaattgactaaccttttgaataatctatgaccaatgatatgtgaccgctatgtttggacaaggcatagtcaggataattaggaaata 10411598  T
Q  2043 caccatttggtccaatggcaaataacaattttgtactaggttgtgtagttttcaattgaaagatcatgtagactagtgatgtgccagctgcagctatgga 2142  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10411599 caccatttggtccaatggcaaataacaattttgtactaggttgtgtagttttcaattgaaagatcatgtagactagtgatgtgccagctgcagctatgga 10411698  T
Q  2143 tgatgcattcataatataaagttctcctttgtcaagaatcacttcatttgttgattttccatcaagagagtacattttcattccccctgcacctgaagat 2242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10411699 tgatgcattcataatataaagttctcctttgtcaagaatcacttcatttgttgattttccatcaagagagtacattttcattccccctgcacctgaagat 10411798  T
Q  2243 ggcatccaccctacaattgcagtagaaccaaccatgttgccatttttggagaaccctatagctccatatgcatttatgtttgttgggaatgagaatataa 2342  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10411799 ggcatccaccctacaatcgcagtagaaccaaccatgttgccatttttggagaaccctatagctccatatgcatttatgtttgttgggaatgagaatataa 10411898  T
Q  2343 aactccatatatttgatgaagccttagcatactgttcaattttcacaacaataatttcaatgtaaaatcgatcactaaattagtagctaaaattagcatc 2442  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||    
T  10411899 aactccatatatttgatgaagccttagcatactgttcaattttcacaacaataatttcaatgtaaaattgatcactaagttagtacctaaaattagcatc 10411998  T
Q  2443 attttgcaaatcgatcacaaattcatttagcgaccttttttagttgaattcgcagatacgaattgttcgtcttagttgttggatgaagatcgaacaaaca 2542  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    ||||    
T  10411999 attttgccaatcgatcacaaattcatttagcaaccttttttagttgaattcgcagatacgaattgttcatcttagttgttggatgaagatcg----aaca 10412094  T
Q  2543 agtggtagtatttaaatctgatatgaagttagaatatgagttgatcgatctttgcgacggcatacaattctacatcatgatgct 2626  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10412095 agtggtagtatttaaatctgatatgaagttagaatatgagttgattgatctttgcgacggcatacaattctacatcatgatgct 10412178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 602; E-Value: 0
Query Start/End: Original strand, 458 - 1237
Target Start/End: Original strand, 10410019 - 10410792
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        ||||||||||||||||||    
T  10410019 atatttaattcatttcatgttaaaaaattctaaattttggtaaatgaatcttttgtaatgttttaaacttatcttaaaaaaatcgttcaaaaatttaaga 10410118  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaacttcatataaatcatttttataggaactnnnnnnngctattaaaattaagtaaaga 657  Q
     | ||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||| |       | |||||||||||||||| ||    
T  10410119 ctctaaggataattagagaaactttgttttaatagagactaaaacttcatgtaaatcatttttataggaa-ttaaaaaagttattaaaattaagtaagga 10410217  T
Q  658 ttaaacttagaagtttcaaattttataagnnnnnnnnc-atatttaacccttaattttattctattacctagtttatttgattctttattgatatggctt 756  Q
     |||||||||||  |||||||||||||||          |||||||||||||||||||||||||||| |||||||||||||||   ||||||||||||||    
T  10410218 ctaaacttagaa--ttcaaattttataaggaaaaaatatatatttaacccttaattttattctattaactagtttatttgatt---tattgatatggctt 10410312  T
Q  757 catcctttttgtgctgatcatatctttctaaagttaaaactgtttacgatattctcctagagcccacacattggaaaaatatttctatccattggataat 856  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10410313 catcctttttgtgctgatcatatctttctaaagttaaa-ctgtttacgatattctcctagagcccacacattggaaaaatatttctatccattggataat 10410411  T
Q  857 ttagcatgacagttttcaaagatcctcctgtcagctcctgcaataataaataacacaagtaaaatcattgtttcagtcataattcaaattcagattgatc 956  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10410412 ttagcatgacagttttcaaagatcctcctgtcagctcctgcaataataaataacacaagtaaaatcattgtttcaatcataattcaaattcagattgatc 10410511  T
Q  957 aaactcattaatcgctctagctcaaccatttggttagccagataattgaatgagtaaatattttagtctctatcttagcatggttttgaatgatgtcttt 1056  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10410512 aaactcattaatcgctctagctcaaccatttggttagccagataattgaatgagtaaatattttagtctctatcttagcatggttttgaatgatgtcttt 10410611  T
Q  1057 attaggatagttttagacttgtactgtgtccctctactcaatcatgcattataaaaagtggagttaatttagagtaaatggaaatcactaagacactaca 1156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10410612 attaggatagttttagacttgtactgtgtccctctactcaatcatgcattataaaaagtggagttaatttagagtaaatggaaatcactaagacactaca 10410711  T
Q  1157 caccaacaaatactctgaggatgaaattgtgatccccccaaacaggacttcacagaagtgattttgtgtgataagccgtta 1237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  10410712 caccaacaaatactctgaggatgaaattgtgatccccccaaacaggacttcacagaagtgattttgtgtggaaagccgtta 10410792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 130; E-Value: 2e-66
Query Start/End: Original strand, 18 - 186
Target Start/End: Original strand, 10409701 - 10409870
Alignment:
Q  18 ttaatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacattttcctttgtttaatta 117  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||| ||||||||||| |||||||||||||||||||    
T  10409701 ttaatgtgttaaatacacaagtttcaagataaagtttctattttaaacctcttatcaagtgtcttaagggcacttgttaatattttcctttgtttaatta 10409800  T
Q  118 tgctt-aacttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatctgc 186  Q
    || || ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||    
T  10409801 tgtttaaacttttaagattttgaacaatttcttgcggaagtgttaagaacattactaaaagttcatctgc 10409870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 121; E-Value: 5e-61
Query Start/End: Original strand, 2710 - 2830
Target Start/End: Original strand, 10412262 - 10412382
Alignment:
Q  2710 aacacatactctgagaatgaaattgtgatcgccccaaacaggaatgcagagaagtgattttgtatcaaaagggattggttgctgaagttggaccaaatta 2809  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10412262 aacacatactctgagaatgaaattgtgatcgccccaaacaggaatgcagagaagtgattttgtatcaaaagggattggttgctgaagttggaccaaatta 10412361  T
Q  2810 gaggcacatgaatctagagaa 2830  Q
    |||||||||||||||||||||    
T  10412362 gaggcacatgaatctagagaa 10412382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 101; E-Value: 4e-49
Query Start/End: Original strand, 456 - 677
Target Start/End: Complemental strand, 32514168 - 32513947
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaat-tctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaattta 554  Q
    ||||||||||||||||| |||||||||||  |||||||||| ||||| ||||||||||||| ||| ||||||| ||||       ||||| |||||||||    
T  32514168 ttatatttaattcatttcatgttaaaaaaaatctaaattttagtaaacgaaccttttgtaacgttctaaacttgtctcaaaataatcgtttaaaaattta 32514069  T
Q  555 agagtttaaggataattagagaaactttgttttaataggaactaaaacttcatataaatcatttttataggaactnnnnnnngctattaaaattaagtaa 654  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||| ||| ||||| ||||||||| | |||        |||||||||||||||||    
T  32514068 agagtttaaggataattagagaaactttgttttagtagggactaaaactacatgtaaattatttttataaggactaaaaaga-ctattaaaattaagtaa 32513970  T
Q  655 agattaaacttagaagtttcaaa 677  Q
     ||||||||||||||||||||||    
T  32513969 ggattaaacttagaagtttcaaa 32513947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 1e-33
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 36063557 - 36063414
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| |||| |||||||||  ||||||| ||||||| ||||       ||||||||||||||||||    
T  36063557 atatttaattcgtttcatgttaaaaaattctaaattttagtaattgaacctttcataatgttctaaacttgtctcaaaaaaatcgttcaaaaatttaaga 36063458  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||||||  |||||||||||    
T  36063457 gtttaaggataattaaacaaactttgttttagcaggaactaaaa 36063414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 9e-29
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 25102083 - 25101940
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| |||| |||||||||  || |||||||||||| ||||       | |||||||| |||||||    
T  25102083 atatttaattcgtttcatgttaaaaaattctaaattttagtaagtgaacctttcatagtgttttaaacttgtctcaaaaaaattgttcaaaagtttaaga 25101984  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||| ||||||| |||||||    
T  25101983 gtttaaggataattaaacaaactttgttgtaatagggactaaaa 25101940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-27
Query Start/End: Original strand, 458 - 604
Target Start/End: Complemental strand, 42499501 - 42499356
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||  || |||| ||||||| ||||       ||||||||||||||||||    
T  42499501 atatttaattcgttttatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctc-aaaaaatcgttcaaaaatttaaga 42499403  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaactt 604  Q
    ||||||| ||||||| | ||||||| || ||| | ||||||||||||    
T  42499402 gtttaagaataattaaacaaactttattgtaacaagaactaaaactt 42499356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-26
Query Start/End: Original strand, 458 - 585
Target Start/End: Complemental strand, 5696034 - 5695907
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||||| | || ||||||||||||||||||| ||||||||||||||  || |||||||||||| ||||       || |||||||||||||||    
T  5696034 atatttaattcatctcatattaaaaaattctaaattttagtaaatgaacctttcatagtgttttaaacttgtctcgaaaaaatcattcaaaaatttaaga 5695935  T
Q  558 gtttaaggataattagagaaactttgtt 585  Q
    ||||||||||||||| | ||||||||||    
T  5695934 gtttaaggataattaaacaaactttgtt 5695907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-26
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 35369360 - 35369503
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| | || |||||||||  || |||| ||||||||||||       ||||||||||||||||||    
T  35369360 atatttaattcgtttcatgttaaaaaattctaaattttagcaattgaacctttcatagtgttctaaacttatctcaaaaaaatcgttcaaaaatttaaga 35369459  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
     |||||||||||||| | |||||||||||||  ||| |||||||    
T  35369460 ctttaaggataattaaacaaactttgttttagcagggactaaaa 35369503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 8e-26
Query Start/End: Original strand, 458 - 628
Target Start/End: Complemental strand, 42024372 - 42024204
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||  ||||| ||| || ||||||||||||||| |||||  ||| ||| |||||||| ||||||| |||        ||||||||||||||||||    
T  42024372 atatttaacccatttcatggtataaaattctaaattttagtaaacaaacttttggtaatgttctaaacttgtct--aaaaaatcgttcaaaaatttaaga 42024275  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaacttcatataaatcatttttataggaac 628  Q
    |||||| ||||||||||||||||||||||||  ||| ||||||||| ||| ||||| | ||||||||||||    
T  42024274 gtttaaagataattagagaaactttgttttagcagggactaaaactacatgtaaattacttttataggaac 42024204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 3e-25
Query Start/End: Original strand, 458 - 587
Target Start/End: Original strand, 21135493 - 21135622
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| || ||||||||||||||||||| |||| |||||||||  ||||||| |||| || ||||       ||||||||||||||||||    
T  21135493 atatttaattcgtttcattttaaaaaattctaaattttagtaattgaacctttcataatgttctaaatttgtctcaaaaaaatcgttcaaaaatttaaga 21135592  T
Q  558 gtttaaggataattagagaaactttgtttt 587  Q
    ||||||||||||||| | ||||||||||||    
T  21135593 gtttaaggataattaaacaaactttgtttt 21135622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 5e-24
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 5250511 - 5250368
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||||||||||| | |  ||| | || || ||||       ||||||||||||||||||    
T  5250511 atatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcgcagcgttctgaatttgtctcaaaaaaatcgttcaaaaatttaaga 5250412  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||| ||| ||| |||||||    
T  5250411 gtttaaggataattaaacaaactttgttgtaagagggactaaaa 5250368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 5e-24
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 8784748 - 8784891
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||||||||||||||||| |||||||| ||||||||||||||| || |||| ||||||||| ||       | |||| ||||||| |||    
T  8784748 atatttaattctttttatgttaaaaaattttaaattttagtaaatgaaccttttatagtgttctaaacttatgtcaaaaaaattgttcgaaaatttgaga 8784847  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||| ||||||||| | |||||||||| ||| | |||||||||    
T  8784848 gtttacggataattaaacaaactttgttgtaacaagaactaaaa 8784891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 5e-24
Query Start/End: Original strand, 458 - 585
Target Start/End: Complemental strand, 36470946 - 36470819
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    |||| |||||| ||| |||||||||||||||||||||| ||||||||||||||  || |||| |||||||||||        ||||||||||||| ||||    
T  36470946 atatctaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttatcttaaaaaaatcgttcaaaaattgaaga 36470847  T
Q  558 gtttaaggataattagagaaactttgtt 585  Q
    ||||||||||||||| | ||||||||||    
T  36470846 gtttaaggataattaaacaaactttgtt 36470819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 5e-24
Query Start/End: Original strand, 458 - 585
Target Start/End: Original strand, 44265618 - 44265745
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| | ||||||||||||  || |||| ||||||| ||||       ||||| ||||||||||||    
T  44265618 atatttaattcttttcatgttaaaaaattctaaattttagcaaatgaacctttcatagtgttctaaacttgtctcgaaaaaatcgtttaaaaatttaaga 44265717  T
Q  558 gtttaaggataattagagaaactttgtt 585  Q
    ||||||||||||||| | ||||||||||    
T  44265718 gtttaaggataattaaacaaactttgtt 44265745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 3e-22
Query Start/End: Original strand, 458 - 594
Target Start/End: Original strand, 6018209 - 6018345
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||  ||| ||||||||||||| |||||||| ||||||||||||||  ||||||| ||||||| ||||       | |||||||||||||| |    
T  6018209 atatttaatttgtttcatgttaaaaaattataaattttagtaaatgaacctttcataatgttctaaacttgtctcataaaaattgttcaaaaatttaaaa 6018308  T
Q  558 gtttaaggataattagagaaactttgttttaatagga 594  Q
    ||||||| ||||||| | |||||||||| ||||||||    
T  6018309 gtttaagaataattaaacaaactttgttgtaatagga 6018345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-21
Query Start/End: Original strand, 458 - 585
Target Start/End: Original strand, 23483514 - 23483641
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||||| ||||||||||  |||||||||||||  || |||| ||||||| ||||       | ||||||||||||||||    
T  23483514 atatttaattcgtttcatgttaaaaaactctaaattttaataaatgaacctttcatagtgttctaaacttgtctcaaaaaaattgttcaaaaatttaaga 23483613  T
Q  558 gtttaaggataattagagaaactttgtt 585  Q
    ||||||||||||||| | ||||||||||    
T  23483614 gtttaaggataattaaacaaactttgtt 23483641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-21
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 27875568 - 27875425
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||||  || |||| ||||||| |||        |||| |||||||||||||    
T  27875568 atatttaattcatttaatgttaaaaaattctaaattttagtaaatgaacctttaatagtgttctaaacttgtctaaaaaaaatcgtccaaaaatttaaga 27875469  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||   ||||||| | |||||||||| ||| ||| |||||||    
T  27875468 gtttataaataattaaacaaactttgttgtaagagggactaaaa 27875425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-21
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 28015749 - 28015606
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||||  || |||| ||||||| |||        |||| |||||||||||||    
T  28015749 atatttaattcatttaatgttaaaaaattctaaattttagtaaatgaacctttaatagtgttctaaacttgtctaaaaaaaatcgtccaaaaatttaaga 28015650  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||   ||||||| | |||||||||| ||| ||| |||||||    
T  28015649 gtttataaataattaaacaaactttgttgtaagagggactaaaa 28015606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 55; E-Value: 1e-21
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 32615883 - 32615801
Alignment:
Q  20 aatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacattt 102  Q
    |||||||| ||||||| | |||||||||||| |||||| ||||||| ||||||||||||||||||| ||||||||||||||||    
T  32615883 aatgtgttgaatacacgaattccaagataaaatttctactttaaacttcttatcaagtgccctaagggcacttgttaacattt 32615801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 5e-21
Query Start/End: Original strand, 458 - 588
Target Start/End: Original strand, 35863211 - 35863341
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||||||| |||||||| |||| |||||||||  || |||| ||||||| ||||       | |||||||| |||||||    
T  35863211 atatttaattcgtttcatgttaaaaaattttaaattttagtaattgaacctttcatagtgttctaaacttgtctcaaaaatattgttcaaaagtttaaga 35863310  T
Q  558 gtttaaggataattagagaaactttgtttta 588  Q
    ||||||||||||||| | |||||||||||||    
T  35863311 gtttaaggataattaaacaaactttgtttta 35863341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 5e-21
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 41281423 - 41281293
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||| ||| |||| |||||||||  || |||| ||||||| |||        ||||| ||||||||||||    
T  41281423 atatttaattcgtttcatgttaaaaaattctaaactttagtaattgaacctttcatagtgttctaaacttgtctaaaaaaaatcgtttaaaaatttaaga 41281324  T
Q  558 gtttaaggataattagagaaactttgtttta 588  Q
    ||||||||||||||| | |||||||||||||    
T  41281323 gtttaaggataattaaacaaactttgtttta 41281293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 2e-20
Query Start/End: Original strand, 456 - 601
Target Start/End: Original strand, 33322701 - 33322846
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaa 555  Q
    ||||||||||||| ||| ||||||||||| |||||||||||||||||||||||||  || |||| ||||||| | |        |||||||||| |||||    
T  33322701 ttatatttaattcgtttcatgttaaaaaaatctaaattttggtaaatgaacctttcatagtgttctaaacttgtattgaaaaaatcgttcaaaattttaa 33322800  T
Q  556 gagtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||||| |||||||| | |||||||  | ||| |||||||||||    
T  33322801 gagtttaaagataattaaacaaactttactataacaggaactaaaa 33322846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 17842634 - 17842776
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||||||| |||| || |||| ||||| | || |       |||||   ||||||||||    
T  17842634 atatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaactttttatagtgttctaaacatgtc-ccaaaaaatcgtttggaaatttaaga 17842732  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | ||||||||||||| |||| |||||||    
T  17842733 gtttaaggataattaaacaaactttgttttagtagggactaaaa 17842776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 458 - 589
Target Start/End: Complemental strand, 18840039 - 18839908
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||||||||||| |||| ||| ||||||||||  || |||| ||||| ||||         |||||| |||||||||||    
T  18840039 atatttaattcgtttcatgttaaaaaattctaagttttagtagatgaacctttcatagtgttctaaacatatccaaaaaaaatcgttcgaaaatttaaga 18839940  T
Q  558 gtttaaggataattagagaaactttgttttaa 589  Q
    ||||||||||||||| | ||||||||||||||    
T  18839939 gtttaaggataattaaacaaactttgttttaa 18839908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 24451654 - 24451797
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| |||| |||||||||  || |||| ||||||| ||||       || ||||||| |||||||    
T  24451654 atatttaattcgtttcatgttaaaaaattctaaattttagtaattgaacctttcatagtgttctaaacttgtctcaaaaaaatcattcaaaattttaaga 24451753  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||| ||||||| | ||||||| |||||  ||| |||||||    
T  24451754 gtttaagaataattaaacaaactttattttagcagggactaaaa 24451797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 50; E-Value: 1e-18
Query Start/End: Original strand, 20 - 117
Target Start/End: Original strand, 13521770 - 13521867
Alignment:
Q  20 aatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacattttcctttgtttaatta 117  Q
    |||||||  ||||||||| || ||| ||||| |||||| ||||||| |||||||| ||||||||||||||||||||||||||| ||||| ||| ||||    
T  13521770 aatgtgtagaatacacaaatttcaaaataaaatttctactttaaacttcttatcaggtgccctaagagcacttgttaacatttccctttattttatta 13521867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-17
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 32244682 - 32244603
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatct 184  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||  |||||||||| ||||||| ||||||||||||    
T  32244682 tttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatct 32244603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 2e-17
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 37967706 - 37967850
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatc-tcnnnnnnntcgttcaaaaatttaag 556  Q
    ||||||||||| ||| ||||||||||  |||||||||||||||||||||||||  || |||| ||||||| || |        |||||||||| ||||||    
T  37967706 atatttaattcgtttcatgttaaaaatatctaaattttggtaaatgaacctttcatagtgttctaaacttgtcttaaaaaaaatcgttcaaaactttaag 37967805  T
Q  557 agtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||| |||| | |||||||||| ||| ||| |||||||    
T  37967806 agtttaaggatgattaaacaaactttgttgtaacagggactaaaa 37967850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 2e-17
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 44894695 - 44894616
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatct 184  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||  |||||||||| ||||||| ||||||||||||    
T  44894695 tttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatct 44894616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 13611305 - 13611387
Alignment:
Q  20 aatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacattt 102  Q
    |||||||  ||||||||| || ||| ||||| |||||| ||||||| |||||||| |||||||||||||||||||||||||||    
T  13611305 aatgtgtagaatacacaaatttcaaaataaaatttctactttaaacttcttatcaggtgccctaagagcacttgttaacattt 13611387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 30968834 - 30968977
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    |||||||||| |||  || ||||||||||||||||||| ||||| |||| |||  || |||| ||||||| |||         |||| ||||||||||||    
T  30968834 atatttaatttattacatattaaaaaattctaaattttagtaaacgaacatttcatattgttctaaacttgtctaaaaaaaaccgtttaaaaatttaaga 30968933  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||||||| ||| |||||||    
T  30968934 gtttaaggataattaaacaaactttgttttaagagggactaaaa 30968977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 33274315 - 33274373
Alignment:
Q  370 ttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtgcc 428  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  33274315 ttatcttttcaatgcaatatttattatttatttctattttaagatctttctcttgtgcc 33274373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 37706844 - 37706702
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||| |||||||||||||||  ||| |||||||||  || |||| ||| ||| |||        ||||||||||||||||||    
T  37706844 atatttaattcgtttcatgttagaaaattctaaattttaataattgaacctttcatagtgttctaatcttgtct-aaaaaaatcgttcaaaaatttaaga 37706746  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||||||  ||| |||||||    
T  37706745 gtttaaggataattaaacaaactttgttttagcagggactaaaa 37706702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 474 - 585
Target Start/End: Complemental strand, 38706548 - 38706437
Alignment:
Q  474 atgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaagagtttaaggataattag 573  Q
    |||||||||||||||||||||| ||||||||||||||  || |||| ||||||| ||||       ||||||||||||| ||| ||||||| |||||||     
T  38706548 atgttaaaaaattctaaattttagtaaatgaacctttcatattgttctaaacttgtctcaaaaaaatcgttcaaaaattgaagtgtttaagaataattaa 38706449  T
Q  574 agaaactttgtt 585  Q
    | ||||||||||    
T  38706448 acaaactttgtt 38706437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 39337150 - 39337293
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||||| | ||||||||  ||| |||||||||  || |||| ||||||| ||||       || |||||||||||||||    
T  39337150 atatttaattcgtttaatgttaaaaaaatttaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaagattcattcaaaaatttaaga 39337249  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | ||||||||| ||| || | |||||||    
T  39337250 gtttaaggataattaaacaaactttgtcttagtatggactaaaa 39337293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 0.000000000000001
Query Start/End: Original strand, 456 - 625
Target Start/End: Complemental strand, 28701793 - 28701622
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaattttggtaaatgaacctttt---gtaatgttttaaacttatctcnnnnnnntcgttcaaaaatt 552  Q
    ||||||||||||||||| ||||||| |||||| ||||||| |||||  ||||||||   ||| | || |||| || ||||       || || ||| |||    
T  28701793 ttatatttaattcatttcatgttaataaattccaaattttagtaaacaaaccttttatggtactattctaaatttgtctcaaaaaa-tcatttaaagatt 28701695  T
Q  553 taagagtttaaggataattagagaaactttgttttaataggaactaaaacttcatataaatcatttttatagg 625  Q
    ||||||||| | |||||||||||||||||||||| | |||| ||||||||| ||| ||||| |||||||||||    
T  28701694 taagagtttgaagataattagagaaactttgtttcattagggactaaaactacatgtaaattatttttatagg 28701622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 0.000000000000005
Query Start/End: Original strand, 458 - 585
Target Start/End: Original strand, 6590435 - 6590563
Alignment:
Q  458 atatttaattcattttatgttaaaaaat-tctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaag 556  Q
    ||||||||||  ||| |||||||||||  |||||||||| ||||||||||||||  || |||| ||||||| ||||       | |||||||||||||||    
T  6590435 atatttaatttttttcatgttaaaaaaaatctaaattttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatggttcaaaaatttaag 6590534  T
Q  557 agtttaaggataattagagaaactttgtt 585  Q
    |||||||| ||||||| | ||||||||||    
T  6590535 agtttaagaataattaaacaaactttgtt 6590563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 5765837 - 5765694
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    |||||||||| |||| ||||||||||||| || ||||| ||||||||||||||  || |||| ||||||| | |        ||||| ||||||||||||    
T  5765837 atatttaatttatttcatgttaaaaaattatagattttagtaaatgaacctttcatagtgttctaaacttgtataaaaagaatcgttaaaaaatttaaga 5765738  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | ||| ||| |||||  ||| |||||||    
T  5765737 gtttaaggataattaaacaaaatttattttagcagggactaaaa 5765694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 1157 - 1223
Target Start/End: Original strand, 10412258 - 10412324
Alignment:
Q  1157 caccaacaaatactctgaggatgaaattgtgatccccccaaacaggacttcacagaagtgattttgt 1223  Q
    |||||||| |||||||||| |||||||||||||| |||||||||||| | || ||||||||||||||    
T  10412258 caccaacacatactctgagaatgaaattgtgatcgccccaaacaggaatgcagagaagtgattttgt 10412324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 527
Target Start/End: Original strand, 3865863 - 3865932
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||| |||| |||||||||||||||||| ||| ||||| |||||||| |||||||| |||||||    
T  3865863 atatttaatttatttcatgttaaaaaattctaaagtttagtaaacgaacctttagtaatgttctaaactt 3865932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 6244295 - 6244226
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||| |||| |||||||||||||||||||||| ||||| |||  |||||||||||| |||||||    
T  6244295 atatttaatttatttcatgttaaaaaattctaaattttagtaaacgaatattttgtaatgttctaaactt 6244226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 17062486 - 17062417
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||||||| |||  || ||||||||||||    
T  17062486 atatttaattcgtttgatgttaaaaaattctaaattttagtaaatgaacatttcatagtgttttaaactt 17062417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 527
Target Start/End: Original strand, 17585872 - 17585941
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||||||| |||  || ||||||||||||    
T  17585872 atatttaattcgtttgatgttaaaaaattctaaattttagtaaatgaacatttcatagtgttttaaactt 17585941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 584
Target Start/End: Complemental strand, 41590459 - 41590334
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| || |||||||||||  || |||| ||||||| ||         | |||||||||||||| |    
T  41590459 atatttaattcgtttcatgttaaaaaattctaaattttagt-aatgaacctttcatagtgttataaacttgtcataaaaaaattgttcaaaaatttaaaa 41590361  T
Q  558 gtttaaggataattagagaaactttgt 584  Q
    ||||||||||||||| | |||||||||    
T  41590360 gtttaaggataattaaacaaactttgt 41590334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 378 - 433
Target Start/End: Original strand, 404438 - 404493
Alignment:
Q  378 tcaatgcaatatttattatttaattctattttaagatctttatcttgtgcctttaa 433  Q
    ||||| ||||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  404438 tcaatacaatatttattgtttaattctattttaagatatttatcttgtgccgttaa 404493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 106
Target Start/End: Complemental strand, 29912186 - 29912102
Alignment:
Q  20 aatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacattttcct 106  Q
    |||| ||| ||||||||| ||  |||||||| |||||| ||||||| |||||||||||||||  || ||||||||||||||||||||    
T  29912186 aatgagttgaatacacaaattttaagataaaatttctactttaaacttcttatcaagtgccc--agggcacttgttaacattttcct 29912102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 456 - 527
Target Start/End: Original strand, 32243847 - 32243918
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||| | |||| ||||||||||||| |||||||| ||||| |||||||| |||||||| |||||||    
T  32243847 ttatatttaaattatttcatgttaaaaaattataaattttagtaaacgaacctttagtaatgttctaaactt 32243918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 639 - 686
Target Start/End: Original strand, 44265798 - 44265845
Alignment:
Q  639 tattaaaattaagtaaagattaaacttagaagtttcaaattttataag 686  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||||    
T  44265798 tattaaaattaagtaaagactaaacttagaagtttccaattttataag 44265845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 458 - 527
Target Start/End: Original strand, 6243643 - 6243713
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaa-ttttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    ||||||||||  ||| |||||||||||||||||| |||| ||||| ||||||||||||||||| |||||||    
T  6243643 atatttaatttgtttcatgttaaaaaattctaaatttttagtaaacgaaccttttgtaatgttctaaactt 6243713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 2710 - 2772
Target Start/End: Original strand, 10410716 - 10410778
Alignment:
Q  2710 aacacatactctgagaatgaaattgtgatcgccccaaacaggaatgcagagaagtgattttgt 2772  Q
    |||| |||||||||| |||||||||||||| |||||||||||| | || ||||||||||||||    
T  10410716 aacaaatactctgaggatgaaattgtgatccccccaaacaggacttcacagaagtgattttgt 10410778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 543 - 601
Target Start/End: Original strand, 12469454 - 12469512
Alignment:
Q  543 ttcaaaaatttaagagtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||||||||| ||||||||||||||||| | |||||||||| ||||||| |||||||    
T  12469454 ttcaaaaatttaggagtttaaggataattaaacaaactttgttgtaatagggactaaaa 12469512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 458 - 588
Target Start/End: Original strand, 16473152 - 16473283
Alignment:
Q  458 atatttaattcattttatgttaaaaaattc-taaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaag 556  Q
    ||||||||||| ||| |||||||||||    |||||||| |||| |||||||||  || |||| |||| || ||||       || ||||||||||||||    
T  16473152 atatttaattcgtttcatgttaaaaaaaaaataaattttagtaattgaacctttcatagtgttctaaatttgtctcaaaaaaatcattcaaaaatttaag 16473251  T
Q  557 agtttaaggataattagagaaactttgtttta 588  Q
    |||||||||||||||| | |||||||||||||    
T  16473252 agtttaaggataattaaacaaactttgtttta 16473283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 458 - 588
Target Start/End: Original strand, 16477723 - 16477854
Alignment:
Q  458 atatttaattcattttatgttaaaaaattc-taaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaag 556  Q
    ||||||||||| ||| |||||||||||    |||||||| |||| |||||||||  || |||| |||| || ||||       || ||||||||||||||    
T  16477723 atatttaattcgtttcatgttaaaaaaaaaataaattttagtaattgaacctttcatagtgttctaaatttgtctcaaaaaaatcattcaaaaatttaag 16477822  T
Q  557 agtttaaggataattagagaaactttgtttta 588  Q
    |||||||||||||||| | |||||||||||||    
T  16477823 agtttaaggataattaaacaaactttgtttta 16477854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 458 - 532
Target Start/End: Complemental strand, 17498615 - 17498541
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctc 532  Q
    ||||||||||| ||| || ||||||||||||||||||| ||||||||| ||||| || |||| ||||||| ||||    
T  17498615 atatttaattcgtttcatattaaaaaattctaaattttagtaaatgaatcttttatagtgttctaaacttgtctc 17498541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 543 - 601
Target Start/End: Complemental strand, 30658491 - 30658433
Alignment:
Q  543 ttcaaaaatttaagagtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||||||||||||||||||||||||||| | |||||||||| ||| ||| |||||||    
T  30658491 ttcaaaaatttaagagtttaaggataattaaacaaactttgttgtaacagggactaaaa 30658433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 458 - 528
Target Start/End: Complemental strand, 43988276 - 43988206
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactta 528  Q
    |||||||| ||||||||||||||||||||||||||||| ||| || |||||||  || |||| ||||||||    
T  43988276 atatttaactcattttatgttaaaaaattctaaattttagtatataaacctttcatagtgttctaaactta 43988206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 32243687 - 32243768
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatctgc 186  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||  |||| ||||| |||| || ||||||| ||||||    
T  32243687 tttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtattaagaacatcacgaaaagtttatctgc 32243768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 32514328 - 32514247
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatctgc 186  Q
    |||| |||| ||||||||| ||||||||||||| ||||||||  | | ||||||||||| |||||||||| |||||||||||    
T  32514328 tttgcttaactatgcttaaacttttaagattttaaacaattttttacagaagtgttaagaacattactaatagttcatctgc 32514247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 587
Target Start/End: Original strand, 36910510 - 36910637
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||||| | ||||||||||  |||||||||| |||||| |  ||||||||||||| ||||||| | |        ||||| ||||||||||||    
T  36910510 atatttaattcatgtcatgttaaaaa--tctaaattttagtaaataagtcttttgtaatgttctaaacttgtttacaaaaaatcgttaaaaaatttaaga 36910607  T
Q  558 gtttaaggataattagagaaactttgtttt 587  Q
     |||||||| ||||| | ||||||||||||    
T  36910608 ttttaaggaaaattaaataaactttgtttt 36910637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 3865701 - 3865780
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatct 184  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||  |||| ||||| |||| || ||||||| ||||    
T  3865701 tttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtattaagaacatcacgaaaagtttatct 3865780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 182
Target Start/End: Complemental strand, 3866677 - 3866599
Alignment:
Q  106 tttgtttaattatgcttaa--cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcat 182  Q
    |||||||||||||||||||  ||||||| ||||||||||||||  |||  |||||||||| | ||||| ||||||||||    
T  3866677 tttgtttaattatgcttaaaccttttaaaattttgaacaattttttgcacaagtgttaagaatattacgaaaagttcat 3866599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 23737004 - 23737047
Alignment:
Q  387 tatttattatttaattctattttaagatctttatcttgtgcctt 430  Q
    |||||||| |||||||||||||||||||||||||||||| ||||    
T  23737004 tatttattgtttaattctattttaagatctttatcttgttcctt 23737047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 176
Target Start/End: Complemental strand, 28701933 - 28701866
Alignment:
Q  110 tttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaa 176  Q
    ||||||||||||||| ||||||||||||||||||||||  ||  ||||||||||| | ||||||||||    
T  28701933 tttaattatgcttaaacttttaagattttgaacaattttttgtagaagtgttaagaatattactaaaa 28701866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 30658721 - 30658647
Alignment:
Q  106 tttgtttaattatgcttaacttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttc 180  Q
    ||||||||||||||||||||| || || |||| ||||||||  ||| || || ||||| ||||||||||||||||    
T  30658721 tttgtttaattatgcttaactcttgagtttttaaacaattttttgcagacgtattaagaacattactaaaagttc 30658647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 42964832 - 42964751
Alignment:
Q  20 aatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacattt 102  Q
    |||||||| ||||||||| | |||||||||| |||| | ||||||| ||||||||||||||||| | | |||||||| |||||    
T  42964832 aatgtgttgaatacacaa-tcccaagataaaatttccactttaaacttcttatcaagtgccctaggggaacttgttagcattt 42964751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 540 - 582
Target Start/End: Complemental strand, 43936555 - 43936513
Alignment:
Q  540 tcgttcaaaaatttaagagtttaaggataattagagaaacttt 582  Q
    ||||||||||||||||||||||||||||||||| | |||||||    
T  43936555 tcgttcaaaaatttaagagtttaaggataattaaacaaacttt 43936513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 12189656 - 12189611
Alignment:
Q  34 acaagttccaagataaagtttctattttaaacctcttatcaagtgc 79  Q
    ||||||||||| |||||||||||||||||||| |||||||| ||||    
T  12189656 acaagttccaatataaagtttctattttaaacttcttatcatgtgc 12189611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 79
Target Start/End: Complemental strand, 12434084 - 12434039
Alignment:
Q  34 acaagttccaagataaagtttctattttaaacctcttatcaagtgc 79  Q
    ||||||||||| |||||||||||||||||||| |||||||| ||||    
T  12434084 acaagttccaatataaagtttctattttaaacttcttatcatgtgc 12434039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 28755296 - 28755227
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||| |||| ||||||||||||| || ||||| ||||||||||||||  || |||| |||||||    
T  28755296 atatttaatttatttcatgttaaaaaattatagattttagtaaatgaacctttcatagtgttctaaactt 28755227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 20 - 105
Target Start/End: Complemental strand, 41570089 - 41570004
Alignment:
Q  20 aatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacattttcc 105  Q
    |||||||| |||||| || | |||||||||| |||||| ||||||  ||||||||||||  |||||  ||| ||||||||||||||    
T  41570089 aatgtgttgaatacataaatcccaagataaaatttctactttaaatttcttatcaagtgttctaaggacacctgttaacattttcc 41570004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 42024533 - 42024452
Alignment:
Q  106 tttgtttaattatgcttaactttt-aagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatctgc 186  Q
    |||||||||||||  |||| |||| || ||||| ||||||||  ||| ||||||||||| |||||||||||| |||||||||    
T  42024533 tttgtttaattatatttaaatttttaatattttaaacaattttttgcagaagtgttaagaacattactaaaatttcatctgc 42024452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 638 - 683
Target Start/End: Complemental strand, 42499322 - 42499277
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttat 683  Q
    ||||||||||||||||| ||||||||||||||||||  ||||||||    
T  42499322 ctattaaaattaagtaaggattaaacttagaagttttcaattttat 42499277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 44894535 - 44894466
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||| |||| | | |||| ||||||||||||| ||||| |||| |||||||||||| |||||||    
T  44894535 atatttaatttatttcaagctaaataattctaaattttagtaaacgaacattttgtaatgttctaaactt 44894466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 14548230 - 14548313
Alignment:
Q  23 gtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacattttcctt 107  Q
    ||||| ||||||||| ||||||||||||||||||| ||| ||  ||||| |||||| |||  | ||||||||||| |||||||||    
T  14548230 gtgttgaatacacaaattccaagataaagtttctactttgaatttcttaacaagtg-ccttggggcacttgttaagattttcctt 14548313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 543 - 599
Target Start/End: Complemental strand, 18304702 - 18304646
Alignment:
Q  543 ttcaaaaatttaagagtttaaggataattagagaaactttgttttaataggaactaa 599  Q
    ||||||||||||||||||||||||||||||   |||||||||| ||| ||| |||||    
T  18304702 ttcaaaaatttaagagtttaaggataattaatcaaactttgttgtaagagggactaa 18304646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 32; E-Value: 0.00000007
Query Start/End: Original strand, 388 - 427
Target Start/End: Original strand, 12398132 - 12398171
Alignment:
Q  388 atttattatttaattctattttaagatctttatcttgtgc 427  Q
    ||||||||||||||| |||||||||||| |||||||||||    
T  12398132 atttattatttaattatattttaagatccttatcttgtgc 12398171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 32; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 15546744 - 15546807
Alignment:
Q  39 ttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacattt 102  Q
    |||||||| ||| ||||| ||||||   ||||| ||||||||||||||||||||| ||||||||    
T  15546744 ttccaagaaaaaatttctcttttaagtttcttaacaagtgccctaagagcacttgctaacattt 15546807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 32; E-Value: 0.00000007
Query Start/End: Original strand, 387 - 430
Target Start/End: Original strand, 18310574 - 18310617
Alignment:
Q  387 tatttattatttaattctattttaagatctttatcttgtgcctt 430  Q
    |||||||| | |||||||||||||||||||||||||||| ||||    
T  18310574 tatttattgtctaattctattttaagatctttatcttgttcctt 18310617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 32; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 495
Target Start/End: Original strand, 23762884 - 23762923
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaatttt 495  Q
    ||||||||||||||| ||||||||||||||||||| ||||    
T  23762884 ttatatttaattcatattatgttaaaaaattctaactttt 23762923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 32; E-Value: 0.00000007
Query Start/End: Original strand, 369 - 428
Target Start/End: Complemental strand, 40330195 - 40330136
Alignment:
Q  369 cttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtgcc 428  Q
    ||||| || ||||| |||||||||||||||| || |||||||| ||| ||||||||||||    
T  40330195 cttatattttcaatacaatatttattatttatttttattttaatatcattatcttgtgcc 40330136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 684
Target Start/End: Original strand, 2827159 - 2827205
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||||||||||||||| || |||||||| ||| |||||||||||||    
T  2827159 ctattaaaattaagtaaggactaaacttaaaagcttcaaattttata 2827205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 684
Target Start/End: Original strand, 6590615 - 6590661
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||||||||||||||| || |||||||||||||| | |||||||||    
T  6590615 ctattaaaattaagtaaggactaaacttagaagttcccaattttata 6590661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 684
Target Start/End: Complemental strand, 30806282 - 30806236
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    |||||||||||||||||| | |||||||| ||||||| |||||||||    
T  30806282 ctattaaaattaagtaaatactaaacttaaaagtttccaattttata 30806236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 684
Target Start/End: Original strand, 33322882 - 33322928
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||||||||||| ||| || |||||||||||||||| |||||||||    
T  33322882 ctattaaaattaaataaggactaaacttagaagtttccaattttata 33322928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 94
Target Start/End: Complemental strand, 34085367 - 34085294
Alignment:
Q  20 aatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgt 94  Q
    |||||||| |||||||||| | ||| ||||| |||||| ||||||  |||||||||||| | |||||||||||||    
T  34085367 aatgtgttgaatacacaagcttcaatataaaatttctactttaaat-tcttatcaagtgtcgtaagagcacttgt 34085294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 684
Target Start/End: Original strand, 37967885 - 37967931
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||||||||||||||| || |||||||||||||| | |||||||||    
T  37967885 ctattaaaattaagtaaggactaaacttagaagttcctaattttata 37967931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 3e-50; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 3e-50
Query Start/End: Original strand, 458 - 682
Target Start/End: Complemental strand, 10463416 - 10463196
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    |||||||||| |||| || |||||||||||||||||  |||||| ||||||||||||||||||||||||| ||||       ||||||||||||||||||    
T  10463416 atatttaattaatttcattttaaaaaattctaaatt--ggtaaacgaaccttttgtaatgttttaaacttgtctcaaaaagatcgttcaaaaatttaaga 10463319  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaacttcatataaatcatttttataggaactnnnnnnngctattaaaattaagtaaaga 657  Q
    ||||||| ||||| |||||||||||||||||||||  ||||||||| ||| ||||| ||||||||||| |||       |||||||||||||||||| ||    
T  10463318 gtttaag-ataatcagagaaactttgttttaatagtgactaaaactacatgtaaattatttttatagggact-gaaaaagctattaaaattaagtaagga 10463221  T
Q  658 ttaaacttagaagtttcaaatttta 682  Q
     ||||||||||||||||||||||||    
T  10463220 ctaaacttagaagtttcaaatttta 10463196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 6e-36
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 6331068 - 6331211
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||||  || |||||||||||| ||||       ||||||||||||||||||    
T  6331068 atatttaattcatttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttttaaacttgtctcaaaaaaatcgttcaaaaatttaaga 6331167  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||| ||||| | |||||||    
T  6331168 gtttaaggataattaaacaaactttgttgtaataaggactaaaa 6331211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-33
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 37539958 - 37540101
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||| ||||  ||||||       |||||||||||||||| |    
T  37539958 atatttaattcatttcatgttaaaaaattctaaattttagtaaatgaaccttttgaaatgttctaaatatatctcggaaaaatcgttcaaaaatttaaaa 37540057  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||||||  ||| |||||||    
T  37540058 gtttaaggataattaaacaaactttgttttagcagggactaaaa 37540101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-32
Query Start/End: Original strand, 458 - 684
Target Start/End: Complemental strand, 7238699 - 7238474
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||  ||||||| ||||||| ||||       ||| ||||||||||||||    
T  7238699 atatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcataatgttctaaacttgtctcaaaaaaatcgatcaaaaatttaaga 7238600  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaacttcatataaatcatttttataggaactnnnnnnngctattaaaattaagtaaaga 657  Q
    ||||||||||||||| | |||||||||| ||| ||| ||||||| |  |  ||| |  ||||| |||| |||        ||||||||||||| ||| ||    
T  7238599 gtttaaggataattaaacaaactttgttgtaacagggactaaaattcgaagtaatttttttttgtagggactaaaaaac-ctattaaaattaaataagga 7238501  T
Q  658 ttaaacttagaagtttcaaattttata 684  Q
    ||||||||||||||| |||||||||||    
T  7238500 ttaaacttagaagttgcaaattttata 7238474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 4e-31
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 38159124 - 38159267
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||  || |||| ||||||| ||||       ||||||||||||||||||    
T  38159124 atatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaaga 38159223  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    || |||||||||||| | |||||||||| ||||||| |||||||    
T  38159224 gtgtaaggataattaaacaaactttgttgtaatagggactaaaa 38159267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 6e-30
Query Start/End: Original strand, 458 - 591
Target Start/End: Complemental strand, 22378581 - 22378448
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||| |||||| ||| |||| ||||||| ||||       ||||||||||||||||||    
T  22378581 atatttaattcgtttcatgttaaaaaattctaaattttagtaaatgtacctttcgtagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaaga 22378482  T
Q  558 gtttaaggataattagagaaactttgttttaata 591  Q
    ||||||||||||||| | |||||||||| |||||    
T  22378481 gtttaaggataattaaacaaactttgttgtaata 22378448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 9e-29
Query Start/End: Original strand, 458 - 585
Target Start/End: Original strand, 4926547 - 4926674
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||  || |||| ||||||||||||       ||||||||||||||||||    
T  4926547 atatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttatctcaaaaaaatcgttcaaaaatttaaga 4926646  T
Q  558 gtttaaggataattagagaaactttgtt 585  Q
    |||||| |||||||| | ||||||||||    
T  4926647 gtttaaagataattaaacaaactttgtt 4926674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 9e-29
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 46044414 - 46044271
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| |||| |||||||||  || |||| ||||||| ||||       ||||||||||||||||||    
T  46044414 atatttaattcgtttcatgttaaaaaattctaaattttagtaattgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaaga 46044315  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||||||  ||| |||||||    
T  46044314 gtttaaggataattaaaaaaactttgttttagcagggactaaaa 46044271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 3e-28
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 44167917 - 44167787
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||||||| |||||||||||||||||||||| |||| |||||||||  || |||| ||||||| |||        ||||||||||||||||||    
T  44167917 atatttaattcatttcatgttaaaaaattctaaattttagtaattgaacctttcatagtgttataaacttgtctaaaaaaaatcgttcaaaaatttaaga 44167818  T
Q  558 gtttaaggataattagagaaactttgtttta 588  Q
    ||||||||||||||| | |||||||||||||    
T  44167817 gtttaaggataattaaacaaactttgtttta 44167787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-26
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 43083978 - 43083835
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||  ||| ||||||||||||||||||||||  ||| |||||||||  || |||| ||||||| ||||       ||||||||||||||||||    
T  43083978 atatttaatttttttcatgttaaaaaattctaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaaaattcgttcaaaaatttaaga 43083879  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | ||||||||||||| |||| |||||||    
T  43083878 gtttaaggataattaaacaaactttgttttagtagggactaaaa 43083835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-26
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 43597607 - 43597464
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||  || |||| ||||||| |||        ||||| ||||||||||||    
T  43597607 atatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctaaaataaatcgttaaaaaatttaaga 43597508  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||| ||||| | |||||||    
T  43597507 gtttaaggataattaaacaaactttgttgtaataaggactaaaa 43597464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-24
Query Start/End: Original strand, 456 - 584
Target Start/End: Original strand, 6588857 - 6588985
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaa 555  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||  || |||| ||||||| ||         ||||||||||||||||    
T  6588857 ttatatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcctagtgttataaacttgtcataaaaaaatcgttcaaaaatttaa 6588956  T
Q  556 gagtttaaggataattagagaaactttgt 584  Q
    ||||||||||||||||| | |||||||||    
T  6588957 gagtttaaggataattaaacaaactttgt 6588985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 5e-24
Query Start/End: Original strand, 458 - 589
Target Start/End: Original strand, 47792010 - 47792141
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||||| |||||||||||||| ||||||||||  || |||| ||||||| |||        | ||||||||||||||||    
T  47792010 atatttaattcgtttcatgttaaaaaaatctaaattttggtagatgaacctttcatagtgttctaaacttgtcttaaaaacattgttcaaaaatttaaga 47792109  T
Q  558 gtttaaggataattagagaaactttgttttaa 589  Q
    ||||||||||||||| | ||||||||||||||    
T  47792110 gtttaaggataattaaacaaactttgttttaa 47792141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 8e-20
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 18059178 - 18059318
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||  || |||| ||||||  | ||       ||||||||||||||||||    
T  18059178 atatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaact--tgtccaaaaaatcgttcaaaaatttaaga 18059275  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | ||| |||||| ||| ||| |||||||    
T  18059276 gtttaaggataattaaacaaa-tttgttgtaacagggactaaaa 18059318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 8e-20
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 35482180 - 35482039
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||||||| |||  ||||||||||||||||| |||||||||| |||  || |||| ||||||| ||||       |||||||||||||||| |    
T  35482180 atatttaattcatttaatg--aaaaaattctaaattttagtaaatgaacatttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaaca 35482083  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||| |||||||| | |||||||||| ||||||  |||||||    
T  35482082 gtttaaagataattaaacaaactttgttgtaatagagactaaaa 35482039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 3495815 - 3495958
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||||| | ||||||||  ||| |||| ||||  || ||||||||||||  |||       || |||||||||||||||    
T  3495815 atatttaattcgtttcatgttaaaaaaatttaaattttattaattgaatctttcatagtgttttaaacttgcctcaaaaaattcattcaaaaatttaaga 3495914  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | ||||||||||||| |||| |||||||    
T  3495915 gtttaaggataattaaacaaactttgttttagtagggactaaaa 3495958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 482 - 601
Target Start/End: Complemental strand, 4899963 - 4899844
Alignment:
Q  482 aaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaagagtttaaggataattagagaaactt 581  Q
    |||||||||||||| ||||||||||||||  || |||| |||| || ||||       || |||||||||||||||||||||||||||||| | ||||||    
T  4899963 aaattctaaattttagtaaatgaacctttcatagtgttataaatttgtctcaaaaaaatcattcaaaaatttaagagtttaaggataattaaataaactt 4899864  T
Q  582 tgttttaataggaactaaaa 601  Q
    |||||||| ||| |||||||    
T  4899863 tgttttaacaggtactaaaa 4899844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 458 - 585
Target Start/End: Complemental strand, 14990670 - 14990544
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||||||| ||||||||||||| |||||||| |||| |||||||||  || |||| ||||||| ||||       || |||||||| ||||||    
T  14990670 atatttaattcatttcatgttaaaaaattataaattttagtaa-tgaacctttcatagtgttctaaacttctctcaaaaaaatcattcaaaaacttaaga 14990572  T
Q  558 gtttaaggataattagagaaactttgtt 585  Q
    ||||||||||||||| | ||||||||||    
T  14990571 gtttaaggataattaaacaaactttgtt 14990544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 458 - 585
Target Start/End: Complemental strand, 15420281 - 15420155
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||||||| ||||||||||||| |||||||| |||| |||||||||  || |||| ||||||| ||||       || |||||||| ||||||    
T  15420281 atatttaattcatttcatgttaaaaaattataaattttagtaa-tgaacctttcatagtgttctaaacttctctcaaaaaaatcattcaaaaacttaaga 15420183  T
Q  558 gtttaaggataattagagaaactttgtt 585  Q
    ||||||||||||||| | ||||||||||    
T  15420182 gtttaaggataattaaacaaactttgtt 15420155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 38199221 - 38199363
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||||||||||||||||  | | |||||||||  || | || ||||||| ||||       ||||||||||||||||||    
T  38199221 atatttaattcgtttcatgttaaaaaattctaaattttattgattgaacctttcatagtattctaaacttgtctcaaaaaattcgttcaaaaatttaaga 38199320  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| |  |||||||||||| |||| |||||||    
T  38199321 gtttaaggataatta-aacaactttgttttagtagggactaaaa 38199363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 1e-18
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 10620643 - 10620513
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||||||| |||  || ||||  |||||| |||        ||||||||||||||||||    
T  10620643 atatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacttttcatagtgttcaaaacttgtcttaatgaaatcgttcaaaaatttaaga 10620544  T
Q  558 gtttaaggataattagagaaactttgtttta 588  Q
    ||||||| ||||||| | ||||||| |||||    
T  10620543 gtttaagaataattaaacaaactttatttta 10620513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 2e-17
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 8081817 - 8081896
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatct 184  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||  |||||||||| ||||||| ||||||||||||    
T  8081817 tttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatct 8081896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-16
Query Start/End: Original strand, 106 - 182
Target Start/End: Complemental strand, 1066688 - 1066611
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcat 182  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||  |||||||||| ||||||| ||||||||||    
T  1066688 tttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcat 1066611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-16
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 27727351 - 27727206
Alignment:
Q  458 atatttaattcattttatgttaaaaaa--ttctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaa 555  Q
    ||||||||||| ||||||| |||||||  ||||||||||  || |||||||||||  || | || ||||||| ||||       |||| |||||||||||    
T  27727351 atatttaattcgttttatggtaaaaaaaattctaaatttaagttaatgaacctttcttagtattctaaacttgtctcaaaaaaatcgtacaaaaatttaa 27727252  T
Q  556 gagtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||||| |||||||| | |||||||||| ||||||| |||||||    
T  27727251 gagtttaaagataattaaacaaactttgttgtaatagggactaaaa 27727206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 0.000000000000001
Query Start/End: Original strand, 458 - 526
Target Start/End: Original strand, 1065863 - 1065931
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaact 526  Q
    |||||||||| |||| |||||||||||||||||||||| ||||| |||||||| |||||||| ||||||    
T  1065863 atatttaatttatttcatgttaaaaaattctaaattttagtaaacgaacctttagtaatgttctaaact 1065931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 0.000000000000001
Query Start/End: Original strand, 458 - 591
Target Start/End: Original strand, 1962070 - 1962203
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    |||||| |||| ||| ||||||||||||||||||||||  |||||  ||||||  || |||| || |||| ||||       ||||||||||||||||||    
T  1962070 atatttcattcgtttcatgttaaaaaattctaaattttaataaattgacctttcatagtgttctatacttgtctcaaaaatatcgttcaaaaatttaaga 1962169  T
Q  558 gtttaaggataattagagaaactttgttttaata 591  Q
    ||||||||||||||| |  ||||||||| |||||    
T  1962170 gtttaaggataattaaacgaactttgttgtaata 1962203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 0.000000000000005
Query Start/End: Original strand, 456 - 527
Target Start/End: Original strand, 37107849 - 37107920
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||||| |||| ||||| |||||||||||||||| ||||| |||||||| |||||||| |||||||    
T  37107849 ttatatttaatttatttcatgttgaaaaattctaaattttagtaaacgaacctttagtaatgttctaaactt 37107920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 0.000000000000005
Query Start/End: Original strand, 458 - 529
Target Start/End: Complemental strand, 42974230 - 42974159
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttat 529  Q
    |||||||||| |||  |||||||| ||||||||||||| ||||| ||||||||||||||||| |||||||||    
T  42974230 atatttaatttattccatgttaaataattctaaattttagtaaacgaaccttttgtaatgttctaaacttat 42974159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 0.000000000000005
Query Start/End: Original strand, 458 - 593
Target Start/End: Complemental strand, 47139860 - 47139724
Alignment:
Q  458 atatttaattcattttatgttaaaaaatt-ctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaag 556  Q
    ||||||||||||||| || | |||||| | ||||||||| |||||||||||||   ||||||||||||||| ||||       || |||||||||||||     
T  47139860 atatttaattcatttcatataaaaaaaatactaaattttagtaaatgaaccttgcataatgttttaaacttgtctcaaaaaaatcattcaaaaatttaaa 47139761  T
Q  557 agtttaaggataattagagaaactttgttttaatagg 593  Q
     ||||||||||||||| | ||| ||||||||| ||||    
T  47139760 tgtttaaggataattaaacaaaatttgttttattagg 47139724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 588
Target Start/End: Original strand, 33624959 - 33625087
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| |||| |||||||||  || |||| ||||||| | |        ||  || |||||||||||    
T  33624959 atatttaattcgtttcatgttaaaaaattctaaattttagtaattgaacctttcatagtgttctaaacttgtataaaaaaaatc--tctaaaatttaaga 33625056  T
Q  558 gtttaaggataattagagaaactttgtttta 588  Q
    ||||||||||||||| | |||||||||||||    
T  33625057 gtttaaggataattaaacaaactttgtttta 33625087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 36783284 - 36783342
Alignment:
Q  370 ttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtgcc 428  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||  ||||||||||||    
T  36783284 ttatcttttcaatacaatatttattatttaattctattttaagattcttatcttgtgcc 36783342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 37108683 - 37108604
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatctgc 186  Q
    |||| |||||||||||||| ||||||||||||||||||||||  |||  |||||||||| ||||||| ||||||||||||||    
T  37108683 tttgcttaattatgcttaaacttttaagattttgaacaattt--tgcacaagtgttaagaacattacgaaaagttcatctgc 37108604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 38593284 - 38593358
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagtt 179  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||  |||||||||| ||||||| |||||||    
T  38593284 tttgtttaattatgcttaaacttttaagattttgaacaattttttgcaaaagtgttaagaacattacgaaaagtt 38593358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 462 - 519
Target Start/End: Original strand, 1260315 - 1260372
Alignment:
Q  462 ttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgtt 519  Q
    |||||||||||||| |||||||||||||||||||  |||||||| |||||||||||||    
T  1260315 ttaattcattttatattaaaaaattctaaattttaataaatgaatcttttgtaatgtt 1260372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 12621696 - 12621627
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||| |||| ||||||||||||| |||||||| ||||| |||||||| |||||||| |||||||    
T  12621696 atatttaatttatttcatgttaaaaaattttaaattttagtaaacgaacctttagtaatgttctaaactt 12621627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 542 - 601
Target Start/End: Complemental strand, 29156001 - 29155942
Alignment:
Q  542 gttcaaaaatttaagagtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||| ||||||||||||||||||||||||| | |||||||||| ||||||| |||||||    
T  29156001 gttcataaatttaagagtttaaggataattaaacaaactttgttctaatagggactaaaa 29155942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 42974393 - 42974314
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatct 184  Q
    ||||||||||||||||||| ||||||||||||| ||||||||  |||  |||||| ||| ||||||| ||||||||||||    
T  42974393 tttgtttaattatgcttaaacttttaagattttaaacaattttttgcacaagtgtcaagaacattacgaaaagttcatct 42974314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 456 - 588
Target Start/End: Original strand, 43574410 - 43574542
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaa 555  Q
    ||||||||||||| ||| | |||| |||||||||||||||  ||||||||| |||| || |||| ||||||| || |       ||||||||| |||| |    
T  43574410 ttatatttaattcgtttcaagttagaaaattctaaattttaataaatgaacattttatagtgttctaaacttgtcacaaaaaaatcgttcaaacatttta 43574509  T
Q  556 gagtttaaggataattagagaaactttgtttta 588  Q
    ||||||||| ||||||| | ||| |||||||||    
T  43574510 gagtttaagaataattaaacaaaatttgtttta 43574542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 9633292 - 9633162
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaa-tttaag 556  Q
    |||||||||| |||| | |||||||| || | |||||| ||||||||||||||| ||||||| ||||||| |||        || || ||||| ||||||    
T  9633292 atatttaatttatttcaagttaaaaa-ttatgaattttagtaaatgaaccttttataatgttataaacttgtctaaaaaatatcattaaaaaaatttaag 9633194  T
Q  557 agtttaaggataattagagaaactttgtttta 588  Q
    |||||||||||||||| | |||||||||||||    
T  9633193 agtttaaggataattaaacaaactttgtttta 9633162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 527
Target Start/End: Original strand, 8081977 - 8082046
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||| |||| ||| |||| ||||||||||||| ||||| |||| |||||||||||| |||||||    
T  8081977 atatttaatttatttcatgctaaataattctaaattttagtaaacgaacattttgtaatgttctaaactt 8082046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 527
Target Start/End: Original strand, 8832881 - 8832950
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||| |||| ||| |||| |  |||||||||| ||||||||||||||||||||||| |||||||    
T  8832881 atatttaatttatttcatgctaaataggtctaaattttagtaaatgaaccttttgtaatgttctaaactt 8832950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 540 - 601
Target Start/End: Complemental strand, 11396999 - 11396938
Alignment:
Q  540 tcgttcaaaaatttaagagtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||||||||||||||||||||| | ||||||| |||||  ||| |||||||    
T  11396999 tcgttcaaaaatttaagagtttaaggataattaaacaaactttattttagcagggactaaaa 11396938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 527
Target Start/End: Original strand, 38594685 - 38594754
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||| ||| |||| ||| |||| ||||||||||||| ||||| ||||||||||||||||| |||||||    
T  38594685 atatttgatttatttcatgctaaataattctaaattttagtaaacgaaccttttgtaatgttctaaactt 38594754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 556
Target Start/End: Original strand, 46330971 - 46331069
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaag 556  Q
    ||||||||||| ||  |||||||||||||||||||||| |||| |||||||||  || |||| ||||||| ||||       |||||||||||||||||    
T  46330971 atatttaattcgttacatgttaaaaaattctaaattttagtaattgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaag 46331069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.00000000007
Query Start/End: Original strand, 638 - 686
Target Start/End: Complemental strand, 1544420 - 1544372
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttataag 686  Q
    ||||||||||||||||| || |||||||||||||||| |||||||||||    
T  1544420 ctattaaaattaagtaaggactaaacttagaagtttctaattttataag 1544372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 637 - 684
Target Start/End: Original strand, 28924843 - 28924890
Alignment:
Q  637 gctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    |||||||||||||||||| ||||||||||||||||| | |||||||||    
T  28924843 gctattaaaattaagtaaggattaaacttagaagttcccaattttata 28924890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 479 - 582
Target Start/End: Complemental strand, 15652898 - 15652795
Alignment:
Q  479 aaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaagagtttaaggataattagagaaa 578  Q
    |||||| ||||||||||  ||||| |||||||  || |||| ||||| ||||||       ||||| ||||||||||||||||||||||||||| | |||    
T  15652898 aaaaaaatctaaattttaataaataaacctttcatattgttctaaacgtatctcaaaaaaatcgttaaaaaatttaagagtttaaggataattaaacaaa 15652799  T
Q  579 cttt 582  Q
    ||||    
T  15652798 cttt 15652795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 546 - 588
Target Start/End: Complemental strand, 16080814 - 16080772
Alignment:
Q  546 aaaaatttaagagtttaaggataattagagaaactttgtttta 588  Q
    ||||||||||||||||||||||||||| | |||||||||||||    
T  16080814 aaaaatttaagagtttaaggataattaaacaaactttgtttta 16080772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 23031791 - 23031849
Alignment:
Q  370 ttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtgcc 428  Q
    ||||||| | ||| ||||||||||| || ||||||||||||||||| ||||||||||||    
T  23031791 ttatctttttaatacaatatttattgttcaattctattttaagatcattatcttgtgcc 23031849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 32948332 - 32948382
Alignment:
Q  378 tcaatgcaatatttattatttaattctattttaagatctttatcttgtgcc 428  Q
    ||||||||||||||||| |||||||| | ||| ||||||||||||||||||    
T  32948332 tcaatgcaatatttattttttaattccacttttagatctttatcttgtgcc 32948382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 532
Target Start/End: Complemental strand, 36019885 - 36019811
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctc 532  Q
    |||| |||||| ||| |||||||||| ||||||||||| |||||||||| |||  ||||||| ||||||| ||||    
T  36019885 atatctaattcgtttcatgttaaaaagttctaaattttagtaaatgaacatttcataatgttataaacttgtctc 36019811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 430
Target Start/End: Original strand, 2457972 - 2458033
Alignment:
Q  369 cttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtgcctt 430  Q
    |||||||| ||||| ||||||| ||| |||||||||||||||||||| |||| || ||||||    
T  2457972 cttatcttttcaatacaatattgattgtttaattctattttaagatccttattttatgcctt 2458033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 12621858 - 12621817
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaattt 146  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  12621858 tttgtttaattatgcttaaacttttaagattttgaacaattt 12621817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 38595279 - 38595238
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaattt 146  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  38595279 tttgtttaattatgcttaaacttttaagattttgaacaattt 38595238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 40304476 - 40304435
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaattt 146  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  40304476 tttgtttaattatgcttaaacttttaagattttgaacaattt 40304435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 540 - 601
Target Start/End: Complemental strand, 45958767 - 45958706
Alignment:
Q  540 tcgttcaaaaatttaagagtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||||||||||||  ||||||| | |||||||||||||  || ||||||||    
T  45958767 tcgttcaaaaatttaagagtttaaaaataattaaacaaactttgttttagcagaaactaaaa 45958706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 540 - 588
Target Start/End: Complemental strand, 1544516 - 1544468
Alignment:
Q  540 tcgttcaaaaatttaagagtttaaggataattagagaaactttgtttta 588  Q
    |||||||||||||||| |||||||||||||||| | ||| |||||||||    
T  1544516 tcgttcaaaaatttaaaagtttaaggataattaaacaaaatttgtttta 1544468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 8832718 - 8832798
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcac-attactaaaagttcatct 184  Q
    ||||||||||||||||||| ||||||||||||| ||||||||  |||  |||||| ||| || ||||| ||||||||||||    
T  8832718 tttgtttaattatgcttaaacttttaagatttttaacaattttttgcacaagtgtcaagaactattacgaaaagttcatct 8832798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 495
Target Start/End: Original strand, 2510738 - 2510777
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaatttt 495  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  2510738 ttatatttaattcattacatgttaaaaaattctaaatttt 2510777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 495
Target Start/End: Original strand, 28642551 - 28642590
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaatttt 495  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  28642551 ttatatttaattcattatatgttaaaaaattctaattttt 28642590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000007
Query Start/End: Original strand, 637 - 684
Target Start/End: Original strand, 44081297 - 44081344
Alignment:
Q  637 gctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    |||||||||||||| |||| |||||||||||||||| | |||||||||    
T  44081297 gctattaaaattaaataaaaattaaacttagaagttcccaattttata 44081344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 684
Target Start/End: Complemental strand, 10620464 - 10620418
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||||||||||||||| || |||||||||||||||  |||||||||    
T  10620464 ctattaaaattaagtaaggactaaacttagaagttttcaattttata 10620418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 684
Target Start/End: Original strand, 18059353 - 18059399
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||||||||||||||  || |||||||||||||||| |||||||||    
T  18059353 ctattaaaattaagtatggactaaacttagaagtttccaattttata 18059399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 684
Target Start/End: Complemental strand, 27727169 - 27727123
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||||||||||||||| || |||||||||||||| | |||||||||    
T  27727169 ctattaaaattaagtaaggagtaaacttagaagttcccaattttata 27727123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 684
Target Start/End: Original strand, 47792197 - 47792243
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||||||||||||||| || |||||||||||||| | |||||||||    
T  47792197 ctattaaaattaagtaaggactaaacttagaagttcccaattttata 47792243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 1e-49; HSPs: 86)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 1e-49
Query Start/End: Original strand, 456 - 684
Target Start/End: Original strand, 48410314 - 48410541
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaa 555  Q
    ||||||||||| ||||| |||||||||||||||||||||| || |  |||||||||||||| |||||||||| ||||         ||||||||||||||    
T  48410314 ttatatttaatccatttcatgttaaaaaattctaaattttagtgaccgaaccttttgtaattttttaaacttgtctcaaaaagactgttcaaaaatttaa 48410413  T
Q  556 gagtttaaggataattagagaaactttgttttaataggaactaaaacttcatataaatcatttttataggaactnnnnnnngctattaaaattaagtaaa 655  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||| ||| ||||| ||||||||||| |||       ||||||||||||||||||     
T  48410414 gagtttaaggataattagagaaactttgttttaataatgactaaaactacatgtaaattatttttatagggact-aaaaaagctattaaaattaagtaag 48410512  T
Q  656 gattaaacttagaagtttcaaattttata 684  Q
    || |||||||| |||||||||||||||||    
T  48410513 gactaaacttaaaagtttcaaattttata 48410541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 4e-31
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 30719652 - 30719795
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    |||||||||||  || |||||||||||||||||||||| ||||||||||||||  || |||| ||||||| ||||       ||||||||||||||||||    
T  30719652 atatttaattcgattcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaaga 30719751  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||| ||||||| |||||||    
T  30719752 gtttaaggataattaaacaaactttgttgtaatagggactaaaa 30719795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-26
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 2059517 - 2059659
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||  ||| ||||||| |||||||||||||| ||||||||||||||| ||||||| |||||||||||        |||||||||||||||| |    
T  2059517 atatttaatttgtttcatgttaacaaattctaaattttagtaaatgaaccttttataatgttctaaacttatct-aaaaaaatcgttcaaaaatttaaaa 2059615  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | ||| |||||||||| |||| ||||||    
T  2059616 gtttaaggataattaaacaaattttgttttaacaggatctaaaa 2059659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-26
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 12368366 - 12368223
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||| | ||| ||||||||||||||||||||||  ||| |||||||||  || |||| ||||||| ||||       ||||||||||||||||||    
T  12368366 atatttaatacgtttcatgttaaaaaattctaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaaaattcgttcaaaaatttaaga 12368267  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | ||||||||||||| |||| |||||||    
T  12368266 gtttaaggataattaaacaaactttgttttagtagggactaaaa 12368223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-26
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 33709068 - 33708925
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| || ||||||||||||||||||| |||| |||||||||  || |||| ||||||| ||||       ||||||||||||||||||    
T  33709068 atatttaattcttttcatattaaaaaattctaaattttagtaattgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaaga 33708969  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||||||  ||| |||||||    
T  33708968 gtttaaggataattaaacaaactttgttttagaagggactaaaa 33708925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-26
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 37986867 - 37986724
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||| |||||||||||||  ||| |||||||||  || |||| ||||||| ||||       ||||||||||||||||||    
T  37986867 atatttaattcgtttcatgttaaacaattctaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaaaattcgttcaaaaatttaaga 37986768  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | ||||||||||||| |||| |||||||    
T  37986767 gtttaaggataattaaacaaactttgttttagtagggactaaaa 37986724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 8e-26
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 5430687 - 5430557
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||| ||||||| |||         ||||||||||||||  |    
T  5430687 atatttaattcattttatgttaaaaaattctaaatttcagtaaatgaatcttttgtaatgttataaacttgtcttagaaaaaccgttcaaaaatttacaa 5430588  T
Q  558 gtttaaggataattagagaaactttgtttta 588  Q
    ||||||||||||||| | ||| |||||||||    
T  5430587 gtttaaggataattaaacaaaatttgtttta 5430557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 3e-25
Query Start/End: Original strand, 458 - 571
Target Start/End: Complemental strand, 51561470 - 51561357
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||  || |||| ||||||| ||||       ||||||||||||||||||    
T  51561470 atatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaaga 51561371  T
Q  558 gtttaaggataatt 571  Q
    ||||||||||||||    
T  51561370 gtttaaggataatt 51561357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 5e-24
Query Start/End: Original strand, 460 - 599
Target Start/End: Original strand, 21794508 - 21794647
Alignment:
Q  460 atttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaagagt 559  Q
    ||||||||| ||||||| |||||||||||||||||| || |||||||||||  |||| || ||||||| ||||       |||| |||||||||||||||    
T  21794508 atttaattcgttttatggtaaaaaattctaaattttagttaatgaacctttcttaatattctaaacttgtctcaaaaaattcgtacaaaaatttaagagt 21794607  T
Q  560 ttaaggataattagagaaactttgttttaataggaactaa 599  Q
    |||||||||||||   |||||||||| ||||||| |||||    
T  21794608 ttaaggataattaagcaaactttgttgtaatagggactaa 21794647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 5e-24
Query Start/End: Original strand, 458 - 585
Target Start/End: Complemental strand, 26020522 - 26020395
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||||  || |||| ||||||| || |       ||||||||||||| ||||    
T  26020522 atatttaattcatttaatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttataaacttgtcacaaaaaaatcgttcaaaaattcaaga 26020423  T
Q  558 gtttaaggataattagagaaactttgtt 585  Q
    |||||| |||||||| | ||||||||||    
T  26020422 gtttaatgataattaaacaaactttgtt 26020395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 5e-24
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 36248496 - 36248639
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||  ||| ||||||||||||| ||||||||  ||| |||||||||  || |||||||||||| ||||       || |||||||||||||||    
T  36248496 atatttaatttgtttcatgttaaaaaattttaaattttattaattgaacctttcatagtgttttaaacttgtctcaaaaaattcattcaaaaatttaaga 36248595  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | ||||||||||||| |||| |||||||    
T  36248596 gtttaaggataattaaacaaactttgttttagtagggactaaaa 36248639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-21
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 11999890 - 12000033
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| |||| ||||| |||  || |||| ||||| | ||||       ||||||||||||||||||    
T  11999890 atatttaattcgtttcatgttaaaaaattctaaattttagtaattgaacatttcatagtgttctaaacatgtctcaaaataatcgttcaaaaatttaaga 11999989  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
     |||||||||||||| | |||||||||||||  ||| |||||||    
T  11999990 ctttaaggataattaaacaaactttgttttagcagggactaaaa 12000033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-21
Query Start/End: Original strand, 458 - 588
Target Start/End: Original strand, 52493700 - 52493831
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatct-cnnnnnnntcgttcaaaaatttaag 556  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||  || |||| ||| ||| |||         |||||||||||||||||    
T  52493700 atatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaccttgtctaaaaaaaaatcgttcaaaaatttaag 52493799  T
Q  557 agtttaaggataattagagaaactttgtttta 588  Q
    |||||||||||||||| | |||||||||||||    
T  52493800 agtttaaggataattaaacaaactttgtttta 52493831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 5e-21
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 30982505 - 30982375
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    |||||||||||  || |||||||||||||||||||||| |||| |||||||||  || |||| ||||||| ||||       ||||||||||||||||||    
T  30982505 atatttaattcgcttcatgttaaaaaattctaaattttagtaattgaacctttcatattgttctaaacttgtctcgaaaaaatcgttcaaaaatttaaga 30982406  T
Q  558 gtttaaggataattagagaaactttgtttta 588  Q
     |||||||||| ||| | |||||||||||||    
T  30982405 ttttaaggatatttaaacaaactttgtttta 30982375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 458 - 572
Target Start/End: Original strand, 13501378 - 13501490
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||   | |||| ||||||| ||||       | ||||||||||||||||    
T  13501378 atatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaaccttt--cagtgttctaaacttgtctcaaaaaaattgttcaaaaatttaaga 13501475  T
Q  558 gtttaaggataatta 572  Q
    |||||||||||||||    
T  13501476 gtttaaggataatta 13501490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 36368013 - 36367870
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| |||| | |||||||  || |||| ||||||| ||||       ||||||||||||||| ||    
T  36368013 atatttaattcgtttcatgttaaaaaattctaaattttagtaattaaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttatga 36367914  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||  ||||||| | |||||||||||||  ||| |||||||    
T  36367913 gtttaaaaataattaaacaaactttgttttagcagggactaaaa 36367870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 458 - 585
Target Start/End: Complemental strand, 46517295 - 46517168
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||||| |||||||||| ||||||||||||||  || |||| ||||||| || |       ||| |||||| |||||||    
T  46517295 atatttaattcgtttcatgttaaaaaagtctaaattttagtaaatgaacctttcatagtgttctaaacttgtcccaaaaaaatcgatcaaaattttaaga 46517196  T
Q  558 gtttaaggataattagagaaactttgtt 585  Q
    ||||||||||||||| | ||||||||||    
T  46517195 gtttaaggataattaaacaaactttgtt 46517168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-18
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 7565302 - 7565172
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||| ||||||||| |||||||||||||||||||||| ||||||| |||||| |||||||| ||||||| ||||       ||||| ||||| ||||||    
T  7565302 atattaaattcatttcatgttaaaaaattctaaattttagtaaatgtacctttcgtaatgttctaaacttgtctcataaaaatcgttaaaaaagttaaga 7565203  T
Q  558 gtttaaggataattagagaaactttgtttta 588  Q
    |||| | |||||||  | ||| |||||||||    
T  7565202 gtttgaagataattgtacaaaatttgtttta 7565172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-18
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 12251653 - 12251572
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatctgc 186  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||  |||||||||| ||||||| ||||||||||||||    
T  12251653 tttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatctgc 12251572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-18
Query Start/End: Original strand, 369 - 430
Target Start/End: Complemental strand, 35652539 - 35652478
Alignment:
Q  369 cttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtgcctt 430  Q
    |||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  35652539 cttatcttttcaatgcaatatttattatttaatttaattttaagatctttatcttgtgcctt 35652478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-18
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 52882431 - 52882362
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||| |||| |||||||||||||||||||||| ||||| ||||||||||||||||| |||||||    
T  52882431 atatttaattaatttcatgttaaaaaattctaaattttagtaaacgaaccttttgtaatgttctaaactt 52882362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-17
Query Start/End: Original strand, 458 - 593
Target Start/End: Complemental strand, 26805615 - 26805479
Alignment:
Q  458 atatttaattcattttatgttaaaaaat-tctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaag 556  Q
    ||||||||||| ||| |||||||||||  | ||||||||||||||||||| |||  || |||| ||||||| |||        | |||||||||||||||    
T  26805615 atatttaattcgtttcatgttaaaaaaaatataaattttggtaaatgaacatttcttagtgttctaaacttgtcttaaaaaaatagttcaaaaatttaag 26805516  T
Q  557 agtttaaggataattagagaaactttgttttaatagg 593  Q
    |||||||||||||||| | |||||||||| |||||||    
T  26805515 agtttaaggataattaaacaaactttgttgtaatagg 26805479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-17
Query Start/End: Original strand, 456 - 684
Target Start/End: Complemental strand, 33707495 - 33707267
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaa-aaattta 554  Q
    ||||||||||| ||||| || |||||||| | |||||||| ||||||||| ||||||||||||||||||||| ||||        | |||||    |||     
T  33707495 ttatatttaatacatttcatattaaaaaaatttaaattttagtaaatgaaacttttgtaatgttttaaacttgtctcagaaaatactttcaatttttttt 33707396  T
Q  555 agagtttaaggataattagagaaactttgttttaataggaactaaaacttcatataaatcatttttataggaactnnnnnnngctattaaaattaagtaa 654  Q
    |||||||||||||||||| | |||||||||||||| | | ||||||| | ||| |||||  ||||| || | |||        |||||||||||||||||    
T  33707395 agagtttaaggataattaaacaaactttgttttaacatggactaaaattacatgtaaatattttttctaaggactgaaaaaa-ctattaaaattaagtaa 33707297  T
Q  655 agattaaacttagaagtttcaaattttata 684  Q
     ||||||||||| ||||||  |||||||||    
T  33707296 ggattaaacttaaaagttttcaattttata 33707267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 458 - 585
Target Start/End: Original strand, 43504939 - 43505066
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||| ||||||| ||||||||||||||  || |||| ||||||| |||          ||||||||||||||||    
T  43504939 atatttaattcgtttcatgttaaaaaattccaaattttagtaaatgaacctttcatagtgttctaaacttgtctaaaaaaaacagttcaaaaatttaaga 43505038  T
Q  558 gtttaaggataattagagaaactttgtt 585  Q
    ||||||||||||||| | ||| ||||||    
T  43505039 gtttaaggataattaaacaaattttgtt 43505066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-16
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 12897214 - 12897145
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||| |||| |||||||||||||||||||||  ||||| ||||||||||||||||| |||||||    
T  12897214 atatttaatttatttcatgttaaaaaattctaaatttcagtaaacgaaccttttgtaatgttctaaactt 12897145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-16
Query Start/End: Original strand, 458 - 527
Target Start/End: Original strand, 25352126 - 25352195
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||| |||| ||| |||| ||||||||||||| ||||| |||||||||||||||||||||||||    
T  25352126 atatttaatttatttcatgctaaataattctaaattttagtaaacgaaccttttgtaatgttttaaactt 25352195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-16
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 27550803 - 27550884
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatctgc 186  Q
    ||||||||||||| ||||| ||||||||||||||||||||||  |||  |||||||||| ||||||| ||||||||||||||    
T  27550803 tttgtttaattatacttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatctgc 27550884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 3e-16
Query Start/End: Original strand, 456 - 601
Target Start/End: Original strand, 35530956 - 35531101
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaat-tctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaattta 554  Q
    ||||||||||||| |||  ||||||||||  ||||||||||||||||||||| |||  || |||| |||| || |||        |||||||||||||||    
T  35530956 ttatatttaattcgtttcttgttaaaaaaaatctaaattttggtaaatgaacatttcatagtgttctaaatttgtct-taaaaaatcgttcaaaaattta 35531054  T
Q  555 agagtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||||||||||||||| | |||||||||| ||| ||| |||||||    
T  35531055 agagtttaaggataattaaacaaactttgttgtaacagggactaaaa 35531101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 3e-16
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 46596899 - 46596769
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||||||||||||||| ||||||||||  ||| |||||||||   | |||| ||||||| |||         |||||||||||||||||    
T  46596899 atatttaattcgttttatgttaaaaaaatctaaattttaataattgaacctttcacagtgttctaaacttgtctaaaaaaaaccgttcaaaaatttaaga 46596800  T
Q  558 gtttaaggataattagagaaactttgtttta 588  Q
    ||||||| ||||||| | |||||||||||||    
T  46596799 gtttaagaataattaaacaaactttgtttta 46596769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 3e-16
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 48218135 - 48218054
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatctgc 186  Q
    ||||||||||||||||||| |||| |||||||||||||||||  |||  |||||||||| ||||||| ||||||||||||||    
T  48218135 tttgtttaattatgcttaaactttaaagattttgaacaattttttgcacaagtgttaagaacattacaaaaagttcatctgc 48218054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 0.000000000000005
Query Start/End: Original strand, 369 - 428
Target Start/End: Complemental strand, 10987255 - 10987196
Alignment:
Q  369 cttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtgcc 428  Q
    |||||||| ||||||||||||||||||||  | |||||||||||||||||||||||||||    
T  10987255 cttatcttttcaatgcaatatttattattggaatctattttaagatctttatcttgtgcc 10987196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 0.000000000000005
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 11397042 - 11397121
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatct 184  Q
    ||||||||||||||||||| | ||||||||||||||||||||  |||  |||||||||| ||||||| ||||||||||||    
T  11397042 tttgtttaattatgcttaaacatttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatct 11397121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 0.000000000000005
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 25351966 - 25352045
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatct 184  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||  |||||||||  ||||||| ||||||||||||    
T  25351966 tttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtgttaaaaacattacgaaaagttcatct 25352045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 456 - 582
Target Start/End: Complemental strand, 10041365 - 10041239
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaa 555  Q
    ||||||||||||| | | ||||||||||| | |||||||||||||||||||||||  |  |||| ||||||| |||        ||||| ||||||||||    
T  10041365 ttatatttaattcgtataatgttaaaaaaatttaaattttggtaaatgaacctttcatggtgttctaaacttttcttaaaaaaatcgttaaaaaatttaa 10041266  T
Q  556 gagtttaaggataattagagaaacttt 582  Q
    |||||||| |||||||| | |||||||    
T  10041265 gagtttaaagataattaaacaaacttt 10041239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 12251491 - 12251422
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||| |||| || ||||||||||||||||||| ||||| |||||||| |||||||| |||||||    
T  12251491 atatttaatttatttcatattaaaaaattctaaattttagtaaacgaacctttagtaatgttataaactt 12251422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 584
Target Start/End: Original strand, 19791411 - 19791536
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||||||| |||  || |||| |||||||  |         ||||||||||||||||||    
T  19791411 atatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacatttcatagtgttataaactt-gcataaaaaaatcgttcaaaaatttaaga 19791509  T
Q  558 gtttaaggataattagagaaactttgt 584  Q
    |||||| |||||||| | |||||||||    
T  19791510 gtttaaagataattaaacaaactttgt 19791536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 27551632 - 27551563
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||| |||| |||| ||||||||||||||||| ||||| |||||||| |||||||| |||||||    
T  27551632 atatttaatttatttcatgtaaaaaaattctaaattttagtaaacgaacctttagtaatgttctaaactt 27551563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 48410130 - 48410202
Alignment:
Q  106 tttgtttaattatgcttaac--ttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaa 176  Q
    |||||||||||||||||||   |||||||||||||||||||||  ||| ||||||||||| ||||||||||||    
T  48410130 tttgtttaattatgcttaaactttttaagattttgaacaattttttgcagaagtgttaagaacattactaaaa 48410202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 49767858 - 49767919
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgtt 519  Q
    |||||||||| |||| |||||||||||||||||||||| ||||| |||||||| ||||||||    
T  49767858 atatttaatttatttcatgttaaaaaattctaaattttagtaaacgaacctttagtaatgtt 49767919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 527
Target Start/End: Original strand, 52881760 - 52881829
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||| |||| |||||||||||||||||||||| ||||| |||  |||||||||||| |||||||    
T  52881760 atatttaatttatttcatgttaaaaaattctaaattttagtaaacgaatattttgtaatgttctaaactt 52881829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.0000000000003
Query Start/End: Original strand, 456 - 572
Target Start/End: Complemental strand, 6216503 - 6216384
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaattttggta---aatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatt 552  Q
    |||||||||| |||||||||||||||| |||||||||||| |||   | | |||||||||||||||  |||| || |||        |||||||||||||    
T  6216503 ttatatttaactcattttatgttaaaatattctaaattttagtagttactaaaccttttgtaatgtactaaatttttctttaaaaaatcgttcaaaaatt 6216404  T
Q  553 taagagtttaaggataatta 572  Q
    ||| ||||||||||||||||    
T  6216403 taatagtttaaggataatta 6216384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.0000000000003
Query Start/End: Original strand, 479 - 588
Target Start/End: Original strand, 39681988 - 39682097
Alignment:
Q  479 aaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaagagtttaaggataattagagaaa 578  Q
    ||||||||||||||||| ||||||||||||||  || |||||||||||| |||        | ||||| ||| ||||||||||||||||||||| | |||    
T  39681988 aaaaaattctaaattttagtaaatgaacctttcatagtgttttaaacttgtcttaaaaaaattgttcataaacttaagagtttaaggataattaaacaaa 39682087  T
Q  579 ctttgtttta 588  Q
     |||||||||    
T  39682088 ttttgtttta 39682097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 424
Target Start/End: Complemental strand, 47950042 - 47949991
Alignment:
Q  373 tcttgtcaatgcaatatttattatttaattctattttaagatctttatcttg 424  Q
    |||| ||||||||||||||||| |||||||||||||||||||| ||||||||    
T  47950042 tcttttcaatgcaatatttattttttaattctattttaagatccttatcttg 47949991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 458 - 508
Target Start/End: Original strand, 28701127 - 28701177
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaacct 508  Q
    ||||||||||| |||||||||||||| ||||||||||| ||||||||||||    
T  28701127 atatttaattcgttttatgttaaaaagttctaaattttagtaaatgaacct 28701177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 547 - 601
Target Start/End: Original strand, 29231368 - 29231422
Alignment:
Q  547 aaaatttaagagtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||||||||||||||||||||||| | ||||||||||||| |||| |||||||    
T  29231368 aaaatttaagagtttaaggataattaaacaaactttgttttagtagggactaaaa 29231422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 378 - 423
Target Start/End: Original strand, 23452981 - 23453026
Alignment:
Q  378 tcaatgcaatatttattatttaattctattttaagatctttatctt 423  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  23452981 tcaatacaatatttattattttattctattttaagatctttatctt 23453026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 49767696 - 49767777
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatctgc 186  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||  |||| ||||| |||| || ||||||| ||||||    
T  49767696 tttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtattaagaacatcacgaaaagtttatctgc 49767777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000007
Query Start/End: Original strand, 370 - 414
Target Start/End: Original strand, 21008245 - 21008289
Alignment:
Q  370 ttatcttgtcaatgcaatatttattatttaattctattttaagat 414  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||    
T  21008245 ttatcttttcaatacaatatttattatttaattctattttaagat 21008289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 26761230 - 26761314
Alignment:
Q  18 ttaatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacattt 102  Q
    |||||||||| ||||||||| ||  |||||||| |||  ||||||||||||||||||| ||||||||  ||| |||||| |||||    
T  26761230 ttaatgtgttgaatacacaaattttaagataaaattttcattttaaacctcttatcaaatgccctaaaggcatttgttagcattt 26761314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 44698074 - 44698002
Alignment:
Q  24 tgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgtta 96  Q
    |||| ||||||||| ||||||||||||  ||| | ||||||| | ||||||||||||||||| ||||||||||    
T  44698074 tgttgaatacacaacttccaagataaaacttccactttaaacttattatcaagtgccctaagggcacttgtta 44698002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 49806030 - 49806114
Alignment:
Q  18 ttaatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacattt 102  Q
    |||||||||| ||| ||||| || ||||| ||| ||| ||||||||||||||||||||||| ||||||  ||||| |||| ||||    
T  49806030 ttaatgtgttgaatgcacaaatttcaagacaaaatttttattttaaacctcttatcaagtgtcctaaggacacttattaatattt 49806114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.00000000007
Query Start/End: Original strand, 638 - 686
Target Start/End: Original strand, 52493880 - 52493928
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttataag 686  Q
    ||||||||||||||||| ||| ||||||||||||||| |||||||||||    
T  52493880 ctattaaaattaagtaaggatcaaacttagaagtttccaattttataag 52493928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 7444962 - 7444887
Alignment:
Q  20 aatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgtt 95  Q
    |||||||| ||||||||| |  |||||||||||||||  ||| ||  ||||||||||||||||||| |||||||||    
T  7444962 aatgtgttgaatacacaaatctcaagataaagtttcttctttgaatttcttatcaagtgccctaagggcacttgtt 7444887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 638 - 685
Target Start/End: Complemental strand, 26020344 - 26020297
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttataa 685  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||    
T  26020344 ctattaaaattaagtaaggactaaacttagaagtttccaattttataa 26020297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 27262805 - 27262897
Alignment:
Q  18 ttaatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaa----gagcacttgttaacattttcct 106  Q
    |||||||||| ||||||||| ||| |||| ||| |||| ||||||||| ||||||| ||| |||||     ||||||||||||||||||||||    
T  27262805 ttaatgtgttgaatacacaaattctaagacaaaatttccattttaaacttcttatcgagtaccctagttatgagcacttgttaacattttcct 27262897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 369 - 428
Target Start/End: Original strand, 36438433 - 36438492
Alignment:
Q  369 cttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtgcc 428  Q
    ||||| || ||||||||||||||||| || ||||||||||||||||| |||| |||||||    
T  36438433 cttatattttcaatgcaatatttatttttaaattctattttaagatccttattttgtgcc 36438492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 370 - 417
Target Start/End: Original strand, 47446024 - 47446071
Alignment:
Q  370 ttatcttgtcaatgcaatatttattatttaattctattttaagatctt 417  Q
    ||||||| ||||| |||||||||||||||||||||||||| |||||||    
T  47446024 ttatcttttcaatacaatatttattatttaattctatttttagatctt 47446071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 371 - 426
Target Start/End: Original strand, 47449226 - 47449281
Alignment:
Q  371 tatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtg 426  Q
    |||||| ||||| |||||||||||| ||||||||||||||||||  ||||||||||    
T  47449226 tatcttttcaatacaatatttattagttaattctattttaagattcttatcttgtg 47449281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 672
Target Start/End: Original strand, 2059697 - 2059731
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtt 672  Q
    |||||||||||||||||||||||||||||||||||    
T  2059697 ctattaaaattaagtaaagattaaacttagaagtt 2059731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 369 - 427
Target Start/End: Original strand, 11908588 - 11908646
Alignment:
Q  369 cttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtgc 427  Q
    |||||||| ||||||||| ||||||| ||||||||||| || |||||||||| ||||||    
T  11908588 cttatcttttcaatgcaacatttattttttaattctatatttagatctttatattgtgc 11908646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 51339883 - 51339817
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattac 171  Q
    ||||||||||||||||||| |||||||||||||||||||| |  |||  |||||||||| |||||||    
T  51339883 tttgtttaattatgcttaaacttttaagattttgaacaatcttttgcacaagtgttaagaacattac 51339817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 51841288 - 51841222
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattac 171  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||  ||| |||||| |||||||    
T  51841288 tttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagagttaagaacattac 51841222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 524
Target Start/End: Original strand, 52010035 - 52010101
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaa 524  Q
    |||||||||| |||| ||| |||| | ||||||||||| |||||||||||||||| |||||| ||||    
T  52010035 atatttaatttatttcatgctaaatatttctaaattttagtaaatgaaccttttgcaatgttctaaa 52010101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 378 - 423
Target Start/End: Complemental strand, 7789491 - 7789446
Alignment:
Q  378 tcaatgcaatatttattatttaattctattttaagatctttatctt 423  Q
    ||||||||||||||||| |||||||| ||||||||||| |||||||    
T  7789491 tcaatgcaatatttattttttaattccattttaagatcattatctt 7789446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 414
Target Start/End: Complemental strand, 10101291 - 10101246
Alignment:
Q  369 cttatcttgtcaatgcaatatttattatttaattctattttaagat 414  Q
    |||||||| | ||| |||||||||||||||||||||||||||||||    
T  10101291 cttatctttttaatacaatatttattatttaattctattttaagat 10101246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 519
Target Start/End: Original strand, 11397204 - 11397265
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgtt 519  Q
    |||||||||| |||| ||| |||| ||||||||| ||| ||||| |||||||||||||||||    
T  11397204 atatttaatttatttcatgctaaataattctaaaatttagtaaacgaaccttttgtaatgtt 11397265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 25352731 - 25352690
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaattt 146  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  25352731 tttgtttaattatgcttaaacttttaagattttgaacaattt 25352690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 410
Target Start/End: Original strand, 30322017 - 30322058
Alignment:
Q  369 cttatcttgtcaatgcaatatttattatttaattctatttta 410  Q
    |||||||| |||||||||||||||||||| ||||||||||||    
T  30322017 cttatcttttcaatgcaatatttattattcaattctatttta 30322058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 47008769 - 47008701
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    ||||||||||| |||||||||||||| ||||||||||| |||||| |||||||  || |||| |||||||    
T  47008769 atatttaattcgttttatgttaaaaa-ttctaaattttagtaaataaacctttcatagtgttctaaactt 47008701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 47019070 - 47019119
Alignment:
Q  59 tttaaacctcttatcaagtgccctaagagcacttgttaacattttccttt 108  Q
    ||||||| |||||||||||||| ||||| ||||||||| |||||||||||    
T  47019070 tttaaacttcttatcaagtgccttaagatcacttgttagcattttccttt 47019119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 370 - 423
Target Start/End: Original strand, 50075635 - 50075688
Alignment:
Q  370 ttatcttgtcaatgcaatatttattatttaattctattttaagatctttatctt 423  Q
    ||||||| |||| |||||||||||| |||| ||||||||||| |||||||||||    
T  50075635 ttatcttttcaacgcaatatttattgtttatttctattttaaaatctttatctt 50075688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 12570146 - 12570102
Alignment:
Q  384 caatatttattatttaattctattttaagatctttatcttgtgcc 428  Q
    ||||||||||| |||  ||||||||||||||||||||||||||||    
T  12570146 caatatttattgtttgtttctattttaagatctttatcttgtgcc 12570102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 495
Target Start/End: Original strand, 7603784 - 7603823
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaatttt 495  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  7603784 ttatatttaattcattatatgttaaaaaattctaattttt 7603823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 12897375 - 12897296
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatct 184  Q
    |||||||||||| |||||| |||||||||||||||| ||| |  |||  |||||||||| |||||||  |||||||||||    
T  12897375 tttgtttaattaagcttaaacttttaagattttgaataatcttttgcacaagtgttaagaacattacgtaaagttcatct 12897296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.00000007
Query Start/End: Original strand, 474 - 525
Target Start/End: Original strand, 20357123 - 20357174
Alignment:
Q  474 atgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaac 525  Q
    ||||||||||||||||||||||  ||||| |||||||| ||||||| |||||    
T  20357123 atgttaaaaaattctaaattttattaaataaaccttttataatgttctaaac 20357174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.00000007
Query Start/End: Original strand, 474 - 525
Target Start/End: Complemental strand, 20562832 - 20562781
Alignment:
Q  474 atgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaac 525  Q
    ||||||||||||||||||||||  ||||| |||||||| ||||||| |||||    
T  20562832 atgttaaaaaattctaaattttattaaataaaccttttataatgttctaaac 20562781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 495
Target Start/End: Complemental strand, 25136981 - 25136942
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaatttt 495  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  25136981 ttatatttaattcattatatgttaaaaaattctaattttt 25136942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 27551780 - 27551701
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatct 184  Q
    |||||| |||||||||||| ||||||||||||||||||||||  |||  |||| ||||| |||| || ||||||| ||||    
T  27551780 tttgttaaattatgcttaaacttttaagattttgaacaattttttgcacaagtattaagaacatcacgaaaagtttatct 27551701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 1607394 - 1607444
Alignment:
Q  378 tcaatgcaatatttattatttaattctattttaagatctttatcttgtgcc 428  Q
    ||||| ||||||||||||||||||||||||||||   ||| ||||||||||    
T  1607394 tcaatacaatatttattatttaattctattttaaatccttcatcttgtgcc 1607444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 2571053 - 2571135
Alignment:
Q  20 aatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacattt 102  Q
    |||||||| ||||||  | | |||||||||| ||||  |||||||| ||||| |||||| || |||| |||||||||||||||    
T  2571053 aatgtgttgaatacatcattcccaagataaaatttcctttttaaacttcttaacaagtgtcccaagaacacttgttaacattt 2571135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 684
Target Start/End: Complemental strand, 26805435 - 26805389
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||||||||||||||| || |||||||||||||| | |||||||||    
T  26805435 ctattaaaattaagtaaggactaaacttagaagttcccaattttata 26805389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 78
Target Start/End: Original strand, 31963055 - 31963113
Alignment:
Q  20 aatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtg 78  Q
    |||||||| ||||||||| |||||| | ||| |||| ||||||||| ||||||||||||    
T  31963055 aatgtgttgaatacacaaattccaaaacaaaatttccattttaaacttcttatcaagtg 31963113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 672
Target Start/End: Complemental strand, 46517115 - 46517081
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtt 672  Q
    ||||||||||||||||| |||||||||||||||||    
T  46517115 ctattaaaattaagtaaggattaaacttagaagtt 46517081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 684
Target Start/End: Complemental strand, 47008620 - 47008574
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||||||||||||||| |||| |||||||||||| | |||||||||    
T  47008620 ctattaaaattaagtaaggattgaacttagaagttcccaattttata 47008574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 378 - 427
Target Start/End: Original strand, 47176789 - 47176839
Alignment:
Q  378 tcaatgcaatatttattatttaa-ttctattttaagatctttatcttgtgc 427  Q
    ||||||||||||||||| ||||| ||||||||| ||||| |||||||||||    
T  47176789 tcaatgcaatatttattttttaaattctatttttagatccttatcttgtgc 47176839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 52698480 - 52698418
Alignment:
Q  20 aatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccct 82  Q
    |||||||| ||||||||| | |||||| ||| |||||| |||| || ||||||||||||||||    
T  52698480 aatgtgttgaatacacaattcccaagaaaaaatttctactttagacttcttatcaagtgccct 52698418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 2e-48; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 2e-48
Query Start/End: Original strand, 458 - 684
Target Start/End: Original strand, 3375462 - 3375687
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    |||||||||||||||||||||||||||||| ||||||| ||| | || | |||||||||||| ||||||| ||||       ||||||||||||||||||    
T  3375462 atatttaattcattttatgttaaaaaattccaaattttagtatacgagcattttgtaatgttctaaacttgtctcaaaaaaatcgttcaaaaatttaaga 3375561  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaacttcatataaatcatttttataggaactnnnnnnngctattaaaattaagtaaaga 657  Q
    ||||||||||||||||||||||||||||| | |||| ||||||||| ||| ||||  |||||| ||||||||       |||||||||||||| ||| ||    
T  3375562 gtttaaggataattagagaaactttgtttcagtagggactaaaactacatgtaaagtatttttgtaggaact-aaaaaagctattaaaattaaataatga 3375660  T
Q  658 ttaaacttagaagtttcaaattttata 684  Q
     |||||||| |||||||||||||||||    
T  3375661 ctaaacttaaaagtttcaaattttata 3375687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 9e-35
Query Start/End: Original strand, 458 - 599
Target Start/End: Original strand, 1821151 - 1821292
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    |||||||| |||||| |||||||||||||||||||||| ||||||||||||||  ||||||| ||||||| ||||       ||||||||||||||||||    
T  1821151 atatttaactcatttaatgttaaaaaattctaaattttagtaaatgaacctttcataatgttataaacttgtctcaaaaaaatcgttcaaaaatttaaga 1821250  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaa 599  Q
    |||||| |||||||| | |||||||||| |||||||||||||    
T  1821251 gtttaaagataattaaacaaactttgttgtaataggaactaa 1821292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 9e-29
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 10915475 - 10915618
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||  || |||| ||||||| ||||       ||| ||||||||||||||    
T  10915475 atatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatcgatcaaaaatttaaga 10915574  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||| ||| ||| |||||||    
T  10915575 gtttaaggataattaaacaaactttgttgtaacagggactaaaa 10915618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 9e-29
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 26356703 - 26356846
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||||||| ||||||||||||| |||||||| ||||||||||||||  || |||| ||||||| ||||       ||||||||||||||||||    
T  26356703 atatttaattcatttcatgttaaaaaattttaaattttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaaga 26356802  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||| | ||| ||| |||||||    
T  26356803 gtttaaggataattaaacaaactttgctgtaacagggactaaaa 26356846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 9e-29
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 30660951 - 30661094
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||  || |||| ||||||| ||||       ||||||||||||||||||    
T  30660951 atatttaattcgttttatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaaga 30661050  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||| ||||||| | ||| |||||| ||| ||| |||||||    
T  30661051 gtttaagtataattaaacaaaatttgttgtaacagggactaaaa 30661094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-26
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 844279 - 844422
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||  ||| |||||||||||||||||||||| ||||||||||||||  || |||| ||||||| ||||       ||||||||||||||||||    
T  844279 atatttaatttgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaaga 844378  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||| ||||||| | |||||||||||||  ||| |||||||    
T  844379 gtttaagaataattaaacaaactttgttttagcagggactaaaa 844422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-26
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 29692034 - 29691891
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||  || ||||||||  || ||||       ||||||||||||||||||    
T  29692034 atatttaattcttttcatgttaataaattctaaattttagtaaatgaacctttcatagtgttttaagtttgtctcaaaaaaatcgttcaaaaatttaaga 29691935  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||| || |||| |||||||    
T  29691934 gtttaaggataattaaacaaactttgttgtagtagggactaaaa 29691891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 8e-26
Query Start/End: Original strand, 456 - 601
Target Start/End: Original strand, 12481924 - 12482070
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaa-ttctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaattta 554  Q
    |||||||||||| |||||||||||||||| ||||||||||| | ||||||||||||  || |||| ||||||| |||        |||||||||||||||    
T  12481924 ttatatttaatttattttatgttaaaaaaattctaaattttagcaaatgaacctttcatagtgttctaaacttgtctaaaaaaaatcgttcaaaaattta 12482023  T
Q  555 agagtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||||||||||||||| | ||| |||||| ||||||| |||||||    
T  12482024 agagtttaaggataattaaacaaattttgttgtaatagggactaaaa 12482070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 5e-24
Query Start/End: Original strand, 458 - 593
Target Start/End: Original strand, 17245752 - 17245887
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||| ||| ||| ||||||||||||||||||||||  ||| |||||||||  || |||| ||||||| ||||       ||||||||||||||||||    
T  17245752 atatttatttcgtttcatgttaaaaaattctaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaaaattcgttcaaaaatttaaga 17245851  T
Q  558 gtttaaggataattagagaaactttgttttaatagg 593  Q
    ||||||||||||||| | ||||||||||||| ||||    
T  17245852 gtttaaggataattaaacaaactttgttttagtagg 17245887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-21
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 8710007 - 8710150
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| || |||||||||||  || | || ||||||| |||        |||| |||||||||||||    
T  8710007 atatttaattcgtttcatgttaaaaaattctaaattttagttaatgaacctttcatagtattctaaacttgtcttaaaaaaatcgtacaaaaatttaaga 8710106  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||| ||| ||| |||||||    
T  8710107 gtttaaggataattaaacaaactttgttgtaacagggactaaaa 8710150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-20
Query Start/End: Original strand, 458 - 591
Target Start/End: Complemental strand, 17697509 - 17697376
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| || |||| |||||||||||||| ||||||||||||||  || |||| ||||||| |||        |||||||||| |||||||    
T  17697509 atatttaattcgtttcatcttaataaattctaaattttagtaaatgaacctttcatagtgttctaaacttttctaaaaaaaatcgttcaaaagtttaaga 17697410  T
Q  558 gtttaaggataattagagaaactttgttttaata 591  Q
    ||||||||||||||| | |||||||||| |||||    
T  17697409 gtttaaggataattaaacaaactttgttgtaata 17697376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 8e-20
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 34046558 - 34046702
Alignment:
Q  458 atatttaattcattttatgttaaaaaa-ttctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaag 556  Q
    ||||||||||  ||| ||||||||||| |||||||||||  ||| |||||||||  || |||| ||||||| ||||       |||||||||||||||||    
T  34046558 atatttaatttgtttcatgttaaaaaaattctaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaaaattcgttcaaaaatttaag 34046657  T
Q  557 agtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    | |||||||||||||| | ||||||||||||| |||| |||||||    
T  34046658 aatttaaggataattaaacaaactttgttttagtagggactaaaa 34046702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 5087313 - 5087170
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||  ||| |||||||||||||||||||||| |||||||||| |||  || |||| ||||||| |||         |||||||||| ||||||    
T  5087313 atatttaatttgtttcatgttaaaaaattctaaattttagtaaatgaacatttcatagtgttctaaacttgtctaaaaacaaccgttcaaaaagttaaga 5087214  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||| || |||| |||||||    
T  5087213 gtttaaggataattaaacaaactttgttgtagtagggactaaaa 5087170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 5974432 - 5974289
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||||||| |||||||| || |||||||||||  || | || ||||||| |||        |||| |||||||||||||    
T  5974432 atatttaattcgtttcatgttaaaaaattttaaattttagttaatgaacctttcatagtattctaaacttgtctgaaaaaaatcgtacaaaaatttaaga 5974333  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||| ||| ||| |||||||    
T  5974332 gtttaaggataattaaacaaactttgttgtaacagggactaaaa 5974289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 15721188 - 15721042
Alignment:
Q  458 atatttaattcattttatgttaaaaaa-ttctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnn--tcgttcaaaaattta 554  Q
    ||||||||||| ||| ||||||||||| ||||||| ||| ||||||||||||||  || |||| ||||||| ||||         |||||||||||||||    
T  15721188 atatttaattcgtttcatgttaaaaaaattctaaaatttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaaaatcgttcaaaaattta 15721089  T
Q  555 agagtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||||||||||||||| | |||||||||| ||||| | |||||||    
T  15721088 agagtttaaggataattaaacaaactttgttgtaataaggactaaaa 15721042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-18
Query Start/End: Original strand, 461 - 601
Target Start/End: Complemental strand, 20897933 - 20897791
Alignment:
Q  461 tttaattcattttatgttaaaaaa-ttctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnn-tcgttcaaaaatttaagag 558  Q
    |||||||| ||| ||||||||||| ||||||||||| ||||||||||||||  ||  || |||||||| |||         |||||||||||||||||||    
T  20897933 tttaattcgtttcatgttaaaaaaattctaaattttagtaaatgaacctttcatagcgtcttaaacttgtctaaaaaataatcgttcaaaaatttaagag 20897834  T
Q  559 tttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||||||||||| | ||||||||||||| |||| |||||||    
T  20897833 tttaaggataattaaacaaactttgttttagtagggactaaaa 20897791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 5e-18
Query Start/End: Original strand, 456 - 581
Target Start/End: Original strand, 30492879 - 30493004
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaa 555  Q
    |||||||||| || ||| ||||||||||||| |||||||| ||||||||||| ||  || |||| ||||||| |||        ||||||||||||||||    
T  30492879 ttatatttaactcgtttcatgttaaaaaattataaattttagtaaatgaacccttcatagtgttctaaacttgtctaaaaaaaatcgttcaaaaatttaa 30492978  T
Q  556 gagtttaaggataattagagaaactt 581  Q
    ||||||||||||||||| | ||||||    
T  30492979 gagtttaaggataattaaacaaactt 30493004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 861481 - 861338
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||  ||| |||||||||||||||||||||| ||||||||||||||  || ||||  |||||| ||||       ||||||||||||||||||    
T  861481 atatttaatttgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttcaaaacttttctcaaaaaaatcgttcaaaaatttaaga 861382  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||  ||||||| | ||  |||||||||  ||| |||||||    
T  861381 gtttaaaaataattaaacaagttttgttttagcagggactaaaa 861338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 18503115 - 18502972
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    |||| |||||| ||| | ||||||||| | ||||||||  ||| |||||||||  || |||| ||||||| ||||       || |||||||||||||||    
T  18503115 atatgtaattcgtttcaggttaaaaaaatttaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaaaattcattcaaaaatttaaga 18503016  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | ||||||||||||| |||| |||||||    
T  18503015 gtttaaggataattaaacaaactttgttttagtagggactaaaa 18502972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 0.000000000000005
Query Start/End: Original strand, 458 - 586
Target Start/End: Original strand, 939016 - 939144
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||||||| ||||||||||| | |||||||| ||||||||||||||   | |||| ||||| | ||||       |||||| |||||||| ||    
T  939016 atatttaattcatttcatgttaaaaaaatttaaattttagtaaatgaacctttcaaagtgttctaaacatgtctcaaaaaaatcgttcgaaaatttagga 939115  T
Q  558 gtttaaggataattagagaaactttgttt 586  Q
    |||| |||||||||| | |||||||||||    
T  939116 gtttgaggataattaaacaaactttgttt 939144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 0.000000000000005
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 21108352 - 21108273
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatct 184  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||  |||||||||| ||||||| |||| |||||||    
T  21108352 tttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaatttcatct 21108273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 0.000000000000005
Query Start/End: Original strand, 456 - 601
Target Start/End: Complemental strand, 28476316 - 28476167
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaa----at 551  Q
    ||||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||  || ||||||||  || ||||       ||||||||||    ||    
T  28476316 ttatatttaattcttttcatgttaataaattctaaattttagtaaatgaacctttcatagtgttttaagtttgtctcaaaaaaatcgttcaaaaatttat 28476217  T
Q  552 ttaagagtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||| |||||| ||||||| | |||||||||| || |||| |||||||    
T  28476216 ttaagaatttaagaataattaaacaaactttgttgtagtagggactaaaa 28476167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 24396836 - 24396918
Alignment:
Q  20 aatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacattt 102  Q
    ||||| || ||||||| | ||| |||||||| |||||||||| ||| | ||||||||||||||||| ||||||||||||||||    
T  24396836 aatgttttgaatacacgaattctaagataaaatttctattttcaactttttatcaagtgccctaagggcacttgttaacattt 24396918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 289008 - 289089
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatctgc 186  Q
    ||||||||||||||||||| | ||||||||||||||||||||  |||  |||||||||| ||||||| |||| |||||||||    
T  289008 tttgtttaattatgcttaaacatttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaacttcatctgc 289089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 3914545 - 3914476
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||| ||||| |||| |||||||||||||||||||||| ||||| |||| |||||||||||| |||||||    
T  3914545 atatctaatttatttcatgttaaaaaattctaaattttagtaaacgaactttttgtaatgttctaaactt 3914476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 30353250 - 30353106
Alignment:
Q  458 atatttaattcattttatgttaaaaaat--tctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaa 555  Q
    ||||||||||| ||| |||||||||||   |||||||||| |||| |||||||||  ||||||| ||||||| |||        ||||||||||||||||    
T  30353250 atatttaattcgtttcatgttaaaaaaaactctaaattttagtaagtgaacctttcataatgttctaaacttgtct-aaaaaaatcgttcaaaaatttaa 30353152  T
Q  556 gagtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    | |||||| |||||||| | |||||||| | ||||||| |||||||    
T  30353151 gtgtttaaagataattaaataaactttgatgtaatagggactaaaa 30353106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 572
Target Start/End: Complemental strand, 33744785 - 33744671
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    |||||||||| |||| ||||||||||||| || ||||| ||||||||||||||  || |||| ||||||| | |        ||||| ||||||||||||    
T  33744785 atatttaatttatttcatgttaaaaaattatagattttagtaaatgaacctttcatagtgttctaaacttgtataaaaaaaatcgttaaaaaatttaaga 33744686  T
Q  558 gtttaaggataatta 572  Q
    |||||||||||||||    
T  33744685 gtttaaggataatta 33744671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 456 - 514
Target Start/End: Complemental strand, 30916826 - 30916768
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgta 514  Q
    ||||||||||||||| |||||||| |||||| ||||||||  |||||||||||||||||    
T  30916826 ttatatttaattcatcttatgttataaaattttaaattttaataaatgaaccttttgta 30916768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 289644 - 289563
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatctgc 186  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||  |||||||||| |||| |  ||||||| ||||||    
T  289644 tttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacatcatgaaaagtttatctgc 289563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 85
Target Start/End: Complemental strand, 9050034 - 9049969
Alignment:
Q  20 aatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaag 85  Q
    |||||||| ||||||||| || ||| ||||| |||||||||||||| | |||||||||||||||||    
T  9050034 aatgtgttgaatacacaactttcaaaataaactttctattttaaactttttatcaagtgccctaag 9049969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 21108190 - 21108121
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||| |||| ||| |||| |||| |||||||| ||||| ||||||||||||||||| |||||||    
T  21108190 atatttaatttatttcatgctaaataattataaattttagtaaacgaaccttttgtaatgttctaaactt 21108121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000007
Query Start/End: Original strand, 458 - 510
Target Start/End: Complemental strand, 14256273 - 14256221
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttt 510  Q
    ||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||    
T  14256273 atatttaattcttttcatgttaataaattctaaattttagtaaatgaaccttt 14256221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000007
Query Start/End: Original strand, 460 - 601
Target Start/End: Original strand, 20977537 - 20977678
Alignment:
Q  460 atttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaagagt 559  Q
    ||||||||| ||| ||||||||   || ||||| || ||||||||||||||  || |||| ||||||| |||        ||||||||||||||||||||    
T  20977537 atttaattcttttcatgttaaatttttttaaatattagtaaatgaacctttcatagtgttctaaacttgtctaaaaaatatcgttcaaaaatttaagagt 20977636  T
Q  560 ttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||| ||| | |||||||| ||||  ||| |||||||    
T  20977637 ttaaggatagttaaacaaactttgctttagcagggactaaaa 20977678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 5079630 - 5079486
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnn-tcgttcaaaaatttaag 556  Q
    ||||||||||  ||| |||||||||||   |||||||| |||| |||||||||  || |||| ||||||| ||||        ||||| |||||||||||    
T  5079630 atatttaatttgtttcatgttaaaaaaaattaaattttagtaattgaacctttcatagtgttctaaacttgtctcaaaaaaaatcgtttaaaaatttaag 5079531  T
Q  557 agtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    | |||||||||||||  | |||||||||||||  |||||||||||    
T  5079530 actttaaggataatttaacaaactttgttttagcaggaactaaaa 5079486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 542 - 589
Target Start/End: Complemental strand, 16736691 - 16736644
Alignment:
Q  542 gttcaaaaatttaagagtttaaggataattagagaaactttgttttaa 589  Q
    ||||||||||||||||||||||||||||||| | ||| ||||||||||    
T  16736691 gttcaaaaatttaagagtttaaggataattaaacaaattttgttttaa 16736644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 684
Target Start/End: Complemental strand, 5087136 - 5087090
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||||||||||||||| || |||||||||||||||| |||||||||    
T  5087136 ctattaaaattaagtaaggactaaacttagaagtttccaattttata 5087090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 684
Target Start/End: Original strand, 10915657 - 10915703
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||||||||||||||| ||||||||||||||||| | |||||||||    
T  10915657 ctattaaaattaagtaaggattaaacttagaagttgccaattttata 10915703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 684
Target Start/End: Complemental strand, 20897755 - 20897709
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||||||||||||||| || |||||||||||||||| |||||||||    
T  20897755 ctattaaaattaagtaaggactaaacttagaagtttccaattttata 20897709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 2817286 - 2817225
Alignment:
Q  18 ttaatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgc 79  Q
    |||| ||||| |||| |||| ||||| || ||| ||||||||||||||||||||||||||||    
T  2817286 ttaacgtgttgaataaacaaattccaggaaaaaatttctattttaaacctcttatcaagtgc 2817225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 3914706 - 3914626
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatctgc 186  Q
    |||||||||||||| |||| |||||||||||||||| |||||  |||  |||||||||| ||||||| ||| ||||||||||    
T  3914706 tttgtttaattatgtttaaacttttaagattttgaataattt-ttgcacaagtgttaagaacattacaaaatgttcatctgc 3914626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 540 - 601
Target Start/End: Original strand, 20977251 - 20977312
Alignment:
Q  540 tcgttcaaaaatttaagagtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||||||||||||||||| ||| | |||||||| ||||  ||| |||||||    
T  20977251 tcgttcaaaaatttaagagtttaaggatagttaaacaaactttgctttagcagggactaaaa 20977312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 425
Target Start/End: Complemental strand, 1288210 - 1288154
Alignment:
Q  369 cttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgt 425  Q
    ||||| || ||||| |||||||||| ||||||||||||||||| |||||||| ||||    
T  1288210 cttatattttcaatacaatatttataatttaattctattttaaaatctttattttgt 1288154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 510
Target Start/End: Original strand, 2087609 - 2087661
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttt 510  Q
    |||||||||||   | |||||||||||||||||||||| ||||||||||||||    
T  2087609 atatttaattcggctcatgttaaaaaattctaaattttagtaaatgaaccttt 2087661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 510
Target Start/End: Original strand, 20510651 - 20510703
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttt 510  Q
    |||||||||||  || |||||||||||||||||||||| || |||||||||||    
T  20510651 atatttaattcgattcatgttaaaaaattctaaattttagttaatgaaccttt 20510703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000007
Query Start/End: Original strand, 39 - 102
Target Start/End: Original strand, 6420311 - 6420374
Alignment:
Q  39 ttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacattt 102  Q
    |||||| |||||||| ||| |||||   ||||||||||||||||||| |||||||||| |||||    
T  6420311 ttccaaaataaagttactactttaagtttcttatcaagtgccctaagggcacttgttagcattt 6420374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 684
Target Start/End: Original strand, 30493060 - 30493106
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    |||||||||||||||||||| |||||||| ||||| | |||||||||    
T  30493060 ctattaaaattaagtaaagaataaacttaaaagttcccaattttata 30493106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 31597584 - 31597650
Alignment:
Q  18 ttaatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaa 84  Q
    |||||||||| ||| ||||| || ||||| ||| |||| |||||||| |||||||||||| ||||||    
T  31597584 ttaatgtgttgaatgcacaaatttcaagacaaaatttccattttaaaactcttatcaagtaccctaa 31597650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 378 - 428
Target Start/End: Original strand, 32604569 - 32604619
Alignment:
Q  378 tcaatgcaatatttattatttaattctattttaagatctttatcttgtgcc 428  Q
    ||||| ||||||||||| |||| ||||||||||||||| | ||||||||||    
T  32604569 tcaatacaatatttattgtttatttctattttaagatcgtaatcttgtgcc 32604619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 532
Target Start/End: Complemental strand, 33518479 - 33518406
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctc 532  Q
    ||||||||||||||||| ||| |||||||||||||||| || ||| |||||||  || |||| ||||||| ||||    
T  33518479 atatttaattcattttaggtt-aaaaattctaaattttagttaataaacctttcatagtgttctaaacttgtctc 33518406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 33518641 - 33518559
Alignment:
Q  106 tttgtttaat-tatgctta-acttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatctgc 186  Q
    |||||||||| |||||||| ||| || || |||||||||||||  ||| || |||||||  ||||||||||||||||||||||    
T  33518641 tttgtttaatgtatgcttatactcttgagtttttgaacaattttttgcagacgtgttaaaaacattactaaaagttcatctgc 33518559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 98; Significance: 3e-47; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 98; E-Value: 3e-47
Query Start/End: Original strand, 456 - 684
Target Start/End: Complemental strand, 47976 - 47749
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaa 555  Q
    ||||||||||||||||| |||||||||||||||||||||| | ||| |||||| |||||||||| ||||||| ||||       | ||||||||||||||    
T  47976 ttatatttaattcatttcatgttaaaaaattctaaattttagaaaacgaacctcttgtaatgttctaaacttgtctcaagaaaattgttcaaaaatttaa 47877  T
Q  556 gagtttaaggataattagagaaactttgttttaataggaactaaaacttcatataaatcatttttataggaactnnnnnnngctattaaaattaagtaaa 655  Q
    ||||||||||||||||||| ||| ||||||||  |||| ||||||||| ||| ||||| ||||||||||| |||       ||||||||||||||||||     
T  47876 gagtttaaggataattagaaaaagtttgttttcgtagggactaaaactacatgtaaattatttttatagggact-aaaaaagctattaaaattaagtaag 47778  T
Q  656 gattaaacttagaagtttcaaattttata 684  Q
    || |||||||| |||||||||| ||||||    
T  47777 gactaaacttataagtttcaaaatttata 47749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 53; E-Value: 2e-20
Query Start/End: Original strand, 542 - 684
Target Start/End: Complemental strand, 33002 - 32861
Alignment:
Q  542 gttcaaaaatttaagagtttaaggataattagagaaactttgttttaataggaactaaaacttcatataaatcatttttataggaactnnnnnnngctat 641  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||| |||| |||||||   ||| ||||   |||||||||| |||       | |||    
T  33002 gttcaaaaatttaagagttcaaggataattagaaaaactttgttttagtagggactaaaatcacatgtaaactgtttttatagggact-aaaaaagttat 32904  T
Q  642 taaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||||||| |||||| ||||||||||||||||||| ||||||    
T  32903 taaaattaaataaagactaaacttagaagtttcaaaatttata 32861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 93; Significance: 3e-44; HSPs: 79)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 93; E-Value: 3e-44
Query Start/End: Original strand, 458 - 684
Target Start/End: Original strand, 10674813 - 10675038
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||  |||| ||||||| ||||       ||||| ||| |||||| |    
T  10674813 atatttaattcattttatgttaataaattctaaattttagtaaacgaaccttttgtggtgttctaaacttgtctcaaaaaaatcgtttaaagatttaaaa 10674912  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaacttcatataaatcatttttataggaactnnnnnnngctattaaaattaagtaaaga 657  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||| |||  |||| ||||||||||| | |       ||||||||||||||||||  |    
T  10674913 gtttaaggataattagagaaactttgttttagtagggactaaaactacatgcaaattatttttataggga-ttaaaaaagctattaaaattaagtaagaa 10675011  T
Q  658 ttaaacttagaagtttcaaattttata 684  Q
     |||| |||||||||||||||||||||    
T  10675012 ctaaatttagaagtttcaaattttata 10675038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-32
Query Start/End: Original strand, 467 - 684
Target Start/End: Original strand, 32510329 - 32510546
Alignment:
Q  467 tcattttatgttaaaaaat-tctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaagagtttaagg 565  Q
    |||||| |||||||||||  |||||||||| |||||  |||||||||||||||| || ||||| |||       || ||||||||||||||||||||||     
T  32510329 tcatttcatgttaaaaaaaatctaaattttcgtaaacaaaccttttgtaatgttctagacttacctcataaaaatcattcaaaaatttaagagtttaaga 32510428  T
Q  566 ataattagagaaactttgttttaataggaactaaaacttcatataaatcatttttataggaactnnnnnnngctattaaaattaagtaaagattaaactt 665  Q
     |||||||||||||||||||||| |||||||| ||||| ||| ||||  ||||||||| | |||        ||||||||||||||||| |||||||| |    
T  32510429 ttaattagagaaactttgttttattaggaactcaaactacatgtaaactatttttataaggactaaaaaaa-ctattaaaattaagtaaggattaaacat 32510527  T
Q  666 agaagtttcaaattttata 684  Q
    ||||||| |||||||||||    
T  32510528 agaagttccaaattttata 32510546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 4e-31
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 10463909 - 10464052
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||  || |||| ||||||| ||||       ||||||||||||||||||    
T  10463909 atatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaaga 10464008  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | ||||||| || ||||||| |||||||    
T  10464009 gtttaaggataattaaacaaactttattgtaatagggactaaaa 10464052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 4e-31
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 27335802 - 27335945
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||||| | |||||||||||||||||||||||  ||||||||||||||| |||        | ||||||||||||||||    
T  27335802 atatttaattcgtttcatgttaaaaaaatataaattttggtaaatgaacctttcataatgttttaaacttgtcttaaaaaaattgttcaaaaatttaaga 27335901  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||| ||| |||||||||||    
T  27335902 gtttaaggataattaaataaactttgttgtaacaggaactaaaa 27335945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 9e-29
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 4426194 - 4426337
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||||||  |||  || |||| ||||||||||||       ||||||||||||||||||    
T  4426194 atatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaatatttcatagtgttctaaacttatctcaaaaaaatcgttcaaaaatttaaga 4426293  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||| ||||| | |||||||    
T  4426294 gtttaaggataattaaacaaactttgttgtaataaggactaaaa 4426337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 3e-28
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 8337015 - 8337157
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||  || |||| ||||||| ||||       || |||||||||||||||    
T  8337015 atatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctc-aaaaaatcattcaaaaatttaaga 8337113  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||| ||||||| |||||||    
T  8337114 gtttaaggataattaaacaaactttgttgtaatagggactaaaa 8337157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 3e-28
Query Start/End: Original strand, 458 - 684
Target Start/End: Complemental strand, 9687654 - 9687429
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||| ||||||||| || |||| ||||||||| ||       ||| | ||||||||||||    
T  9687654 atatttaattcgtttcatgttaaaaaattctaaattttagtaaacgaaccttttatagtgttctaaacttatatcaaaaaaatcgattaaaaatttaaga 9687555  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaacttcata-taaatcatttttataggaactnnnnnnngctattaaaattaagtaaag 656  Q
    ||||||||||||||| | |||||||||| ||| ||| ||||||| |||| | ||| |  ||||| |||| |||        ||||||||||||||||| |    
T  9687554 gtttaaggataattaaacaaactttgttgtaacagggactaaaa-ttcaaagtaatttttttttgtagggactaaaaaac-ctattaaaattaagtaagg 9687457  T
Q  657 attaaacttagaagtttcaaattttata 684  Q
    |||||||||||||||| | |||||||||    
T  9687456 attaaacttagaagttgccaattttata 9687429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 5e-27
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 8404518 - 8404374
Alignment:
Q  458 atatttaattcattttatgttaaaaaat-tctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaag 556  Q
    ||||||||||| ||| |||||||||||  |||||||||||||||||||||||||| || |||| ||||||| |||        |||||||||||||||||    
T  8404518 atatttaattcgtttcatgttaaaaaaaatctaaattttggtaaatgaaccttttttagtgttctaaacttgtcttaaaaaaatcgttcaaaaatttaag 8404419  T
Q  557 agtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||||||||||||| | |||||||||| ||| ||| |||||||    
T  8404418 agtttaaggataattaaacaaactttgttgtaacagggactaaaa 8404374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-26
Query Start/End: Original strand, 458 - 585
Target Start/End: Original strand, 17742498 - 17742625
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||||| ||||| |||||||||||||||||||  || |||| |||||||||||        ||||||||||||||||||    
T  17742498 atatttaattcgtttcatgttaaaaaaatctaagttttggtaaatgaacctttcatagtgttctaaacttatcttaaaaaaatcgttcaaaaatttaaga 17742597  T
Q  558 gtttaaggataattagagaaactttgtt 585  Q
    ||||||||||||||| | ||||||||||    
T  17742598 gtttaaggataattaaacaaactttgtt 17742625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 8e-26
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 8218134 - 8218004
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| |||| |||||||||  || |||| ||||||||||||       ||||||||||||||||||    
T  8218134 atatttaattcgtttcatgttaaaaaattctaaattttagtaattgaacctttcatagtgttctaaacttatctcaaaaaaatcgttcaaaaatttaaga 8218035  T
Q  558 gtttaaggataattagagaaactttgtttta 588  Q
     |||||||||||||| | ||||||| |||||    
T  8218034 ctttaaggataattaaacaaactttatttta 8218004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 8e-26
Query Start/End: Original strand, 477 - 684
Target Start/End: Complemental strand, 22023201 - 22022995
Alignment:
Q  477 ttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaagagtttaaggataattagaga 576  Q
    ||||||||||||||||||| ||||||||||||||  |  |||||||||||| ||||       ||||||||||||||||||||||||||||||||| | |    
T  22023201 ttaaaaaattctaaattttagtaaatgaacctttcatggtgttttaaacttgtctcaaaaaaatcgttcaaaaatttaagagtttaaggataattaaaca 22023102  T
Q  577 aactttgttttaataggaactaaaacttcatataaatcatttttataggaactnnnnnnngctattaaaattaagtaaagattaaacttagaagtttcaa 676  Q
    ||||||||| ||| ||| ||||||| |  | |||| |  ||||| |||  |||        ||||||||||||||||| || |||||||||||||||| |    
T  22023101 aactttgttgtaacagggactaaaattagaaataatttttttttgtagtgactaaaaagc-ctattaaaattaagtaaggactaaacttagaagtttcca 22023003  T
Q  677 attttata 684  Q
    ||||||||    
T  22023002 attttata 22022995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 8e-26
Query Start/End: Original strand, 458 - 665
Target Start/End: Original strand, 27307991 - 27308197
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||  ||| |||||||||||||||||||| ||||||||||| ||||  || | || ||||||| ||||       ||||||||||||||||||    
T  27307991 atatttaatttgtttcatgttaaaaaattctaaattgtggtaaatgaatctttcatagttttctaaacttgtctcaaaaaaatcgttcaaaaatttaaga 27308090  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaacttcatataaatcatttttataggaactnnnnnnngctattaaaattaagtaaaga 657  Q
    ||||||||||||||| | |||||||||| ||||| | ||||||| |  |  ||| || ||||||||||||||        ||||||||||||||||| ||    
T  27308091 gtttaaggataattaaacaaactttgttgtaataaggactaaaattagaagtaattcttttttataggaactaaaaaat-ctattaaaattaagtaagga 27308189  T
Q  658 ttaaactt 665  Q
    ||||||||    
T  27308190 ttaaactt 27308197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 5e-24
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 1683288 - 1683145
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||||||| |||  || |||| ||||||| |||        ||||||||||||||||||    
T  1683288 atatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacttttcatagtgttctaaacttgtcttaaagaaatcgttcaaaaatttaaga 1683189  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||| ||| | ||||||| ||||| |||| |||||||    
T  1683188 gtttaaggatagttaaacaaactttattttagtagggactaaaa 1683145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-23
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 38693589 - 38693459
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||||||| |||||||| |||| |||||||||  || | || ||||||| ||||       ||||||||||||||||||    
T  38693589 atatttaattcgtttcatgttaaaaaattataaattttagtaattgaacctttcatagtattctaaacttgtctcaaaaaaatcgttcaaaaatttaaga 38693490  T
Q  558 gtttaaggataattagagaaactttgtttta 588  Q
    ||||||||||||||| | |||||||||||||    
T  38693489 gtttaaggataattaaacaaactttgtttta 38693459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 8e-23
Query Start/End: Original strand, 456 - 601
Target Start/End: Complemental strand, 34785375 - 34785230
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaa 555  Q
    ||||||||||||| ||||||||||||||| | |||||||| ||||||||||||||  || |||| ||||||| |||        ||||| ||||||||||    
T  34785375 ttatatttaattcgttttatgttaaaaaaatttaaattttagtaaatgaacctttcatagtgttataaacttgtctaaaaaaaatcgttaaaaaatttaa 34785276  T
Q  556 gagtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    || |||||||||||||| | |||||||||| ||| ||| |||||||    
T  34785275 gaatttaaggataattaaacaaactttgttgtaacagggactaaaa 34785230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 8e-23
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 40323907 - 40323823
Alignment:
Q  18 ttaatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacattt 102  Q
    |||||||||| |||||||||||| |||||||||||||| ||||||||||| |||||||||||| |||| ||| ||||||||||||    
T  40323907 ttaatgtgttcaatacacaagtttcaagataaagtttccattttaaacctattatcaagtgccataagggcatttgttaacattt 40323823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-21
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 621749 - 621606
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||||||| |||||| | ||||||||||||||| || |||| ||||  | ||||       |||||| |||||||||||    
T  621749 atatttaattcgtttcatgttaaaaaattgtaaattctagtaaatgaaccttttatagtgttctaaatctgtctcataaaaatcgttctaaaatttaaga 621650  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||| ||||||  |||||||    
T  621649 gtttaaggataattaaacaaactttgttgtaatagagactaaaa 621606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-21
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 8313381 - 8313523
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||| |||| |||||| ||||||||||||||  || |||| |||||||  |||       ||||||||||||||||||    
T  8313381 atatttaattcgtttcatgttaaaaa-ttctgaattttagtaaatgaacctttcatagtgttctaaacttgcctcaaaaaaatcgttcaaaaatttaaga 8313479  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | ||||||| || ||||||| |||||||    
T  8313480 gtttaaggataattaaacaaactttcttataatagggactaaaa 8313523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 1e-21
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 24637062 - 24636931
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnn-tcgttcaaaaatttaag 556  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||  || |||| ||| ||| |||         |||||||||||||||||    
T  24637062 atatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaccttgtctaaaaaaaaatcgttcaaaaatttaag 24636963  T
Q  557 agtttaaggataattagagaaactttgtttta 588  Q
    |||||||||||||||| | |||||||||||||    
T  24636962 agtttaaggataattaaacaaactttgtttta 24636931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-21
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 34010094 - 34010237
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||  ||||||| |||||||||||||||||| || |||||||||||  || | || ||||||| ||||       | || |||||||||||||    
T  34010094 atatttaatttgttttatggtaaaaaattctaaattttagttaatgaacctttcttagtattctaaacttgtctcaaaaaaatagtacaaaaatttaaga 34010193  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||| ||||||| |||||||    
T  34010194 gtttaaggataattaaacaaactttgttgtaatagggactaaaa 34010237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 5e-21
Query Start/End: Original strand, 458 - 588
Target Start/End: Original strand, 13920235 - 13920365
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    |||||||||| |||| ||||||||||||||||||||||  ||| ||||| |||  || |||| ||||||| ||||       ||||||||||||| ||||    
T  13920235 atatttaattaatttcatgttaaaaaattctaaattttaataattgaacatttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaattgaaga 13920334  T
Q  558 gtttaaggataattagagaaactttgtttta 588  Q
    ||||||||||||||| | |||||||||||||    
T  13920335 gtttaaggataattaaacaaactttgtttta 13920365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 5e-21
Query Start/End: Original strand, 458 - 588
Target Start/End: Original strand, 21837111 - 21837241
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||| ||||||||||||||| ||||||||||||||| || |||| ||||||| | ||       || ||||||||||||| |    
T  21837111 atatttaattcgtttcatgttagaaaattctaaattttagtaaatgaaccttttatagtgttctaaacttgtatcgaaaaaatcattcaaaaatttaaaa 21837210  T
Q  558 gtttaaggataattagagaaactttgtttta 588  Q
    ||||||||||||||| | ||| |||||||||    
T  21837211 gtttaaggataattaaacaaaatttgtttta 21837241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 5e-21
Query Start/End: Original strand, 461 - 684
Target Start/End: Original strand, 37103207 - 37103428
Alignment:
Q  461 tttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaagagtt 560  Q
    |||||||| ||| |||||| ||||||||||||||| ||||||||||||||  || |||| ||||||| |||        |||||||||||||||||||||    
T  37103207 tttaattcgtttcatgttagaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctaaaaaaaatcgttcaaaaatttaagagtt 37103306  T
Q  561 taaggataattagagaaactttgttttaataggaactaaaacttcatataaatcatttttataggaactnnnnnnngctattaaaattaagtaaagatta 660  Q
    |||||||||||| | |||||||||| ||| | | ||||||| |  |  ||  |  ||||| |||| |||        ||||||||||||||||| |||||    
T  37103307 taaggataattaaataaactttgttgtaacaaggactaaaattagaagtagttt-tttttgtagggactaaaaaac-ctattaaaattaagtaaggatta 37103404  T
Q  661 aacttagaagtttcaaattttata 684  Q
    |||||||||||||| |||||||||    
T  37103405 aacttagaagtttccaattttata 37103428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 2e-20
Query Start/End: Original strand, 456 - 601
Target Start/End: Complemental strand, 14049880 - 14049735
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaa 555  Q
    ||||||||||||||||| ||||||||||||| ||||| || |||||||||| ||| |||||||| ||||| | | |        ||||||||||||||||    
T  14049880 ttatatttaattcatttgatgttaaaaaattttaaatattagtaaatgaacttttcgtaatgttctaaacgtgtattaagaaaatcgttcaaaaatttaa 14049781  T
Q  556 gagtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||||||||| |||| | ||||||| |||||  ||| |||||||    
T  14049780 gagtttaaggatgattaaacaaactttattttagcagggactaaaa 14049735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 8e-20
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 34527189 - 34527333
Alignment:
Q  458 atatttaattcattttatgttaaaaaa-ttctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaag 556  Q
    ||||||||||  ||| ||||||||||| |||||||||||  ||| |||||||||  || |||| ||||||| ||||       |||||||||||||||||    
T  34527189 atatttaatttgtttcatgttaaaaaaattctaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaaaattcgttcaaaaatttaag 34527288  T
Q  557 agtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    | |||||||||||||| | ||||||||||||| |||| |||||||    
T  34527289 aatttaaggataattaaacaaactttgttttagtagggactaaaa 34527333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 4462085 - 4461942
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttg-taatgttttaaacttatctcnnnnnnntcgttcaaaaatttaag 556  Q
    ||||||||||| ||| |||||| ||| ||||||||||| |||||||||||||||  || ||| |||||||| ||||       |||||||||||||||||    
T  4462085 atatttaattcgtttcatgttagaaagttctaaattttagtaaatgaacctttttatagtgtattaaacttgtctcaaaaaa-tcgttcaaaaatttaag 4461987  T
Q  557 agtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||||||||||||| | |||||| ||||||  ||| |||||||    
T  4461986 agtttaaggataattaaacaaacttcgttttagcagggactaaaa 4461942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 457 - 684
Target Start/End: Original strand, 27280327 - 27280550
Alignment:
Q  457 tatatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaag 556  Q
    |||||||||||||||| |||| |||||||||  |||||| ||||||||||||||  ||||||| ||||||| |||           || |||||||||||    
T  27280327 tatatttaattcatttcatgtcaaaaaattccgaattttagtaaatgaacctttaataatgttctaaacttgtctaaaaaaaa---tttaaaaatttaag 27280423  T
Q  557 agtttaaggataattagagaaactttgttttaataggaactaaaacttcatataaatcatttttataggaactnnnnnnngctattaaaattaagtaaag 656  Q
    |||||||||||||||| | ||| |||||||||  ||| ||||||| | ||| | |||  ||||| |||| |||       |||||||||||||| ||| |    
T  27280424 agtttaaggataattaaacaaaatttgttttagcaggtactaaaattacatgtcaatattttttgtagggact-aaaaatgctattaaaattaaataagg 27280522  T
Q  657 attaaacttagaagtttcaaattttata 684  Q
    | |||||||||||||||| |||||||||    
T  27280523 actaaacttagaagtttccaattttata 27280550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 50; E-Value: 1e-18
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 43440996 - 43440866
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||| ||||| ||| ||||||||||||| |||||||| |||| |||||||||  || |||| ||||||||||||       || |||||||||||||||    
T  43440996 atattgaattcgtttcatgttaaaaaattataaattttagtaattgaacctttcatagtgttctaaacttatctcaaaaaaatcattcaaaaatttaaga 43440897  T
Q  558 gtttaaggataattagagaaactttgtttta 588  Q
     |||||||||||| | | |||||||||||||    
T  43440896 atttaaggataatcaaacaaactttgtttta 43440866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 2e-17
Query Start/End: Original strand, 369 - 428
Target Start/End: Original strand, 35563122 - 35563181
Alignment:
Q  369 cttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtgcc 428  Q
    ||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  35563122 cttatattttcaatgtaatatttattatttaattctattttaagatctttatcttgtgcc 35563181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 2e-17
Query Start/End: Original strand, 458 - 582
Target Start/End: Original strand, 40158437 - 40158560
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||  | | ||| ||||||| ||         ||||||||||||||||||    
T  40158437 atatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcat-aggttataaacttgtcataaaaaaatcgttcaaaaatttaaga 40158535  T
Q  558 gtttaaggataattagagaaacttt 582  Q
    ||||||||||||||| | |||||||    
T  40158536 gtttaaggataattaaacaaacttt 40158560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 2e-17
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 40272467 - 40272546
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatct 184  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||  |||||||||| ||||||| ||||||||||||    
T  40272467 tttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatct 40272546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 458 - 572
Target Start/End: Original strand, 41139197 - 41139312
Alignment:
Q  458 atatttaattcattttatgttaaaaaa-ttctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaag 556  Q
    ||||||||||||||| ||| ||||||| ||||||||||| |||| |||||||||   |||||| ||||||| ||||       ||||||||||||||||     
T  41139197 atatttaattcatttcatgataaaaaaattctaaattttagtaattgaacctttcacaatgttctaaacttgtctcaaaaaaatcgttcaaaaatttaaa 41139296  T
Q  557 agtttaaggataatta 572  Q
    ||||||||||||||||    
T  41139297 agtttaaggataatta 41139312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 3e-16
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 2263078 - 2262997
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatctgc 186  Q
    ||||||||||||||||||| ||||||| ||||||||||||||  |||  |||||||||| ||||||| ||||||||||||||    
T  2263078 tttgtttaattatgcttaaacttttaaaattttgaacaattttttgcacaagtgttaagaacattacaaaaagttcatctgc 2262997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 3e-16
Query Start/End: Original strand, 540 - 601
Target Start/End: Original strand, 31211443 - 31211504
Alignment:
Q  540 tcgttcaaaaatttaagagtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||||||||||||||||||||| | |||||||||||||| ||| |||||||    
T  31211443 tcgttcaaaaatttaagagtttaaggataattaaacaaactttgttttaagagggactaaaa 31211504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 3e-16
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 43210749 - 43210680
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||| |||| ||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||    
T  43210749 atatttaatttatttcatgttaaaaaattttaaattttagtaaacgaaccttttgtaatgttctaaactt 43210680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 44; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 9784448 - 9784519
Alignment:
Q  18 ttaatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagca 89  Q
    ||||||||| |||| ||||| || ||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  9784448 ttaatgtgtaaaatgcacaaatttcaagacaaaatttctattttaaacctcttatcaagtgccttaagagca 9784519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 585
Target Start/End: Original strand, 4462928 - 4463055
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||| |||||||||||||| || |||||| ||||  || |  | ||||||| ||||       |||| |||||||||||||    
T  4462928 atatttaattcgtttcatgttaacaaattctaaattttagtcaatgaatctttcatagtactctaaacttgtctcgaaaaaatcgtacaaaaatttaaga 4463027  T
Q  558 gtttaaggataattagagaaactttgtt 585  Q
    ||||||||||||||| | ||||||||||    
T  4463028 gtttaaggataattaaacaaactttgtt 4463055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 26865829 - 26865686
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||||| | ||||||||  ||| || ||||||  || |||| ||||||| |||        || |||||||||||||||    
T  26865829 atatttaattcgtttcatgttaaaaaaatttaaattttattaattggacctttcatagtgttctaaacttgtctaaaaaaattcattcaaaaatttaaga 26865730  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    | ||||||||||||| | ||||||||||||| |||| |||||||    
T  26865729 gcttaaggataattaaacaaactttgttttagtagggactaaaa 26865686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 41174367 - 41174449
Alignment:
Q  20 aatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacattt 102  Q
    |||||||||||| ||||| ||||||||||||  ||| | ||||| | ||||||||||||| || |||||||||||||||||||    
T  41174367 aatgtgttaaatgcacaacttccaagataaaacttccactttaagcttcttatcaagtgctcttagagcacttgttaacattt 41174449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 456 - 684
Target Start/End: Original strand, 36876024 - 36876250
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaa 555  Q
    |||||||||||| |||| ||||||||||||||| |||||| |||||| |||||||  |||||||  |||||| |||        || || ||||||||||    
T  36876024 ttatatttaatttatttcatgttaaaaaattctgaattttagtaaataaacctttaataatgttccaaacttgtct-aaaaaaatcattaaaaaatttaa 36876122  T
Q  556 gagtttaaggataattagagaaactttgttttaataggaactaaaacttcatataaatcatttttataggaactnnnnnnngctattaaaattaagtaaa 655  Q
    |||||| |||||||| | | ||| || || |||  ||| ||||||| | ||| |||||  ||||| |||| |||       ||||||||||||||||||     
T  36876123 gagtttgaggataataacacaaatttggtcttagcagggactaaaattacatgtaaatattttttgtagggact-caaaatgctattaaaattaagtaag 36876221  T
Q  656 gattaaacttagaagtttcaaattttata 684  Q
     | |||||||||||||||| |||||||||    
T  36876222 aactaaacttagaagtttccaattttata 36876250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 41193099 - 41193030
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||  || |||| |||||||    
T  41193099 atattcaattcgttttatgttaaaaaattctaaatttttgtaaatgaacctttgatagtgttctaaactt 41193030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 41; E-Value: 0.0000000000003
Query Start/End: Original strand, 559 - 685
Target Start/End: Original strand, 11154716 - 11154840
Alignment:
Q  559 tttaaggataattagagaaactttgttttaataggaactaaaacttcatataaatcatttttataggaactnnnnnnngctattaaaattaagtaaagat 658  Q
    |||| ||||||||| | |||||||||||||||||| | | ||| | |||||||||  ||||||||||| ||       ||||||||||||||||||||||    
T  11154716 tttacggataattaaacaaactttgttttaatagggattgaaattacatataaatattttttatagga-ctaaaaat-gctattaaaattaagtaaagat 11154813  T
Q  659 taaacttagaagtttcaaattttataa 685  Q
    |||||  ||||||||| ||||||||||    
T  11154814 taaacaaagaagtttccaattttataa 11154840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 460 - 527
Target Start/End: Complemental strand, 9168672 - 9168605
Alignment:
Q  460 atttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||| |||| |||||||||||||||||||||| ||||| || || ||||||||||| |||||||    
T  9168672 atttaatttatttcatgttaaaaaattctaaattttagtaaacgagccgtttgtaatgttctaaactt 9168605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 19332471 - 19332550
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatct 184  Q
    ||||||||||||||||||| |||||||||||||||| |||||  ||   |||||||||| ||||||| ||||||||||||    
T  19332471 tttgtttaattatgcttaaacttttaagattttgaataattttttgtacaagtgttaagaacattacgaaaagttcatct 19332550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 37812681 - 37812752
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaa 176  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||  |||||||||| ||||||| ||||    
T  37812681 tttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaa 37812752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 10674651 - 10674728
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcat 182  Q
    ||||| ||||||||||||| ||||||||||||||||||||||  | |  |||||||||  ||||||||||||||||||    
T  10674651 tttgtataattatgcttaaacttttaagattttgaacaattttttacaaaagtgttaaaaacattactaaaagttcat 10674728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 527
Target Start/End: Original strand, 19332633 - 19332702
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||| |||| ||| |||| |||||||| |||| ||||| ||||||||||||||||| |||||||    
T  19332633 atatttaatttatttcatgctaaataattctaacttttagtaaacgaaccttttgtaatgttctaaactt 19332702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 180
Target Start/End: Original strand, 43209905 - 43209978
Alignment:
Q  108 tgtttaattatgctt-aacttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttc 180  Q
    ||||||||||||||| ||||||||||||||||||||||||  |||  |||| ||||| ||||||| ||||||||    
T  43209905 tgtttaattatgcttgaacttttaagattttgaacaattttttgcacaagtattaagaacattaccaaaagttc 43209978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.00000000007
Query Start/End: Original strand, 540 - 588
Target Start/End: Complemental strand, 18950910 - 18950862
Alignment:
Q  540 tcgttcaaaaatttaagagtttaaggataattagagaaactttgtttta 588  Q
    ||||||| ||||||||||||||||||||||||| | |||||||||||||    
T  18950910 tcgttcagaaatttaagagtttaaggataattaaacaaactttgtttta 18950862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.00000000007
Query Start/End: Original strand, 638 - 686
Target Start/End: Complemental strand, 24636883 - 24636835
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttataag 686  Q
    ||||||||||||||||| ||| ||||||||||||||| |||||||||||    
T  24636883 ctattaaaattaagtaaggatcaaacttagaagtttccaattttataag 24636835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 456 - 527
Target Start/End: Complemental strand, 2262918 - 2262847
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||||| |||| || ||||||||||||||||||| ||||| |||  |||| ||||||| |||||||    
T  2262918 ttatatttaatttatttcatattaaaaaattctaaattttagtaaacgaagtttttataatgttctaaactt 2262847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 19608823 - 19608741
Alignment:
Q  20 aatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacatttt 103  Q
    |||||||| |||| |||| |||||||||||||||||  |||| ||| |||||| ||||||| | | ||||||||||||||||||    
T  19608823 aatgtgttgaatagacaaattccaagataaagtttcctttttgaacttcttattaagtgccttga-agcacttgttaacatttt 19608741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 180
Target Start/End: Complemental strand, 43210911 - 43210836
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttc 180  Q
    ||||||||||||||||||| ||||||||||||||||||||||  ||   |||||||||| ||||||  ||||||||    
T  43210911 tttgtttaattatgcttaaacttttaagattttgaacaattttttgtacaagtgttaagaacattaagaaaagttc 43210836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 639 - 681
Target Start/End: Original strand, 314766 - 314808
Alignment:
Q  639 tattaaaattaagtaaagattaaacttagaagtttcaaatttt 681  Q
    ||||||||||||||||||| |||||||||||||| ||||||||    
T  314766 tattaaaattaagtaaagactaaacttagaagttccaaatttt 314808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 684
Target Start/End: Original strand, 9924584 - 9924630
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||||||||||||||| ||||||||||||||||| | |||||||||    
T  9924584 ctattaaaattaagtaaggattaaacttagaagttcctaattttata 9924630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 684
Target Start/End: Original strand, 17742678 - 17742724
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    |||||||||||||||||||| |||||||||||||| | |||||||||    
T  17742678 ctattaaaattaagtaaagactaaacttagaagttcccaattttata 17742724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 17904373 - 17904315
Alignment:
Q  370 ttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtgcc 428  Q
    ||||||| ||||| |||| |||||| |||||||||||||||||||| ||||||| ||||    
T  17904373 ttatcttttcaatacaatttttattgtttaattctattttaagatccttatcttatgcc 17904315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 585
Target Start/End: Original strand, 28456680 - 28456807
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||  ||| |||||||||||   |||||||| || ||||||| |||  || | || ||||||| ||||       |||| |||||||||||||    
T  28456680 atatttaattagtttcatgttaaaaaaaagtaaattttagttaatgaacttttcatagtattctaaacttgtctcacaaaaatcgtacaaaaatttaaga 28456779  T
Q  558 gtttaaggataattagagaaactttgtt 585  Q
    ||||||||||||||| | ||||||||||    
T  28456780 gtttaaggataattaaacaaactttgtt 28456807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 543 - 601
Target Start/End: Original strand, 37446657 - 37446715
Alignment:
Q  543 ttcaaaaatttaagagtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||| |||||||||||| ||||||||||| | |||||||| ||||||||| |||||||    
T  37446657 ttcaacaatttaagagttcaaggataattaaacaaactttgctttaatagggactaaaa 37446715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 543 - 601
Target Start/End: Complemental strand, 42877650 - 42877592
Alignment:
Q  543 ttcaaaaatttaagagtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||||||||||||||||||| ||||||| | |||||||||| ||| ||| |||||||    
T  42877650 ttcaaaaatttaagagtttaagaataattaaacaaactttgttgtaacagggactaaaa 42877592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 4613116 - 4613063
Alignment:
Q  39 ttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcactt 92  Q
    |||||||| ||||||||| ||||| || ||||||||||||||||||| ||||||    
T  4613116 ttccaagacaaagtttctcttttagacttcttatcaagtgccctaagggcactt 4613063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 527
Target Start/End: Original strand, 9924413 - 9924482
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    ||||||||||  ||| || ||||||||||||||||||| ||||||||||||||  || |||| |||||||    
T  9924413 atatttaatttgtttcattttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaactt 9924482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 466 - 527
Target Start/End: Complemental strand, 18261293 - 18261232
Alignment:
Q  466 ttcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    ||||||| |||||||||||||||||||||| ||||||| ||||||  || |||| |||||||    
T  18261293 ttcatttcatgttaaaaaattctaaattttagtaaatggacctttcatagtgttataaactt 18261232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 639 - 684
Target Start/End: Complemental strand, 30698624 - 30698579
Alignment:
Q  639 tattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    |||||||||||||||| || |||||||||||||||| |||||||||    
T  30698624 tattaaaattaagtaaggactaaacttagaagtttccaattttata 30698579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 639 - 684
Target Start/End: Complemental strand, 30733899 - 30733854
Alignment:
Q  639 tattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    |||||||||||||||| || |||||||||||||||| |||||||||    
T  30733899 tattaaaattaagtaacgactaaacttagaagtttccaattttata 30733854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 32537684 - 32537607
Alignment:
Q  106 tttgtttaattatgctt-aacttttaagattttgaacaatttcctgcggaagtgtt-aagcacattactaaaagttca 181  Q
    ||||||||||||||||| ||||||| |||||||||||||| |  |||  ||||||| ||| |||||||||||||||||    
T  32537684 tttgtttaattatgcttaaacttttgagattttgaacaatgttttgcaaaagtgttaaagaacattactaaaagttca 32537607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 37813039 - 37812998
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaattt 146  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  37813039 tttgtttaattatgcttaaacttttaagattttgaacaattt 37812998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 42645178 - 42645137
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaattt 146  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  42645178 tttgtttaattatgcttaaacttttaagattttgaacaattt 42645137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 510
Target Start/End: Original strand, 2005196 - 2005248
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttt 510  Q
    |||||||||| |||| ||||||||||||| || ||||| ||||||||||||||    
T  2005196 atatttaatttatttcatgttaaaaaattatagattttagtaaatgaaccttt 2005248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 9687788 - 9687708
Alignment:
Q  106 tttgtttaatt-atgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatct 184  Q
    ||||||||||| |||||||| || ||||| |||||||||||||  ||| || |||||||| ||||||||||||| ||||||    
T  9687788 tttgtttaatttatgcttaaactcttaagtttttgaacaattttttgcagacgtgttaagaacattactaaaagatcatct 9687708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 417
Target Start/End: Original strand, 41174192 - 41174240
Alignment:
Q  369 cttatcttgtcaatgcaatatttattatttaattctattttaagatctt 417  Q
    ||||| || ||||| |||||||||||||||||||||||||||| |||||    
T  41174192 cttattttttcaatacaatatttattatttaattctattttaaaatctt 41174240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 686
Target Start/End: Original strand, 42645235 - 42645283
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttataag 686  Q
    ||||||||||||||||| ||||||||||| ||| | |||||||||||||    
T  42645235 ctattaaaattaagtaaggattaaacttaaaagatccaaattttataag 42645283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 32; E-Value: 0.00000007
Query Start/End: Original strand, 458 - 525
Target Start/End: Complemental strand, 30734047 - 30733980
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaac 525  Q
    ||||||||||| | | ||||||||||||||||  |||| |||||||||| |||| ||||||| |||||    
T  30734047 atatttaattcttgtcatgttaaaaaattctattttttagtaaatgaacattttataatgttctaaac 30733980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 1863151 - 1863069
Alignment:
Q  20 aatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacattt 102  Q
    |||||||| ||||||  | |||||||||||| ||| | |||||||| ||||| ||||||| | |||  |||||||||||||||    
T  1863151 aatgtgttgaatacatcatttccaagataaaatttattttttaaacttcttaacaagtgcgccaaggacacttgttaacattt 1863069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 2003962 - 2004044
Alignment:
Q  106 tttgtttaatt-atgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatctgc 186  Q
    ||||||||||| |||||||| || || || |||||||||| ||  |||| | |||||||| ||||||||||||||||||||||    
T  2003962 tttgtttaatttatgcttaaactcttgagtttttgaacaactttttgcgtacgtgttaagaacattactaaaagttcatctgc 2004044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 684
Target Start/End: Original strand, 4463110 - 4463156
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||||||||||||||| || |||||||||||||| | |||||||||    
T  4463110 ctattaaaattaagtaaggactaaacttagaagttcccaattttata 4463156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 378 - 424
Target Start/End: Original strand, 11936053 - 11936099
Alignment:
Q  378 tcaatgcaatatttattatttaattctattttaagatctttatcttg 424  Q
    ||||| ||||| ||||||||||||| ||||||||||| |||||||||    
T  11936053 tcaatacaatagttattatttaattttattttaagatttttatcttg 11936099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 524
Target Start/End: Complemental strand, 22166997 - 22166931
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaa 524  Q
    ||||| || ||||||  |||||||||||||||||||||  ||||||||||||| ||| |||| ||||    
T  22166997 atattaaactcatttcttgttaaaaaattctaaattttactaaatgaacctttcgtagtgttctaaa 22166931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 541 - 587
Target Start/End: Complemental strand, 28616065 - 28616019
Alignment:
Q  541 cgttcaaaaatttaagagtttaaggataattagagaaactttgtttt 587  Q
    |||||||| ||||||||||||||||||||| | | ||||||||||||    
T  28616065 cgttcaaagatttaagagtttaaggataataaaacaaactttgtttt 28616019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 6e-36; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 6e-36
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 53323947 - 53324090
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||||  || |||| ||||||| ||||       ||||||||||||||||||    
T  53323947 atatttaattcatttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaaga 53324046  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||| ||||||| |||||||    
T  53324047 gtttaaggataattaaacaaactttgttgtaatagggactaaaa 53324090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-35
Query Start/End: Original strand, 458 - 684
Target Start/End: Original strand, 38499459 - 38499685
Alignment:
Q  458 atatttaattcattttatgttaaaaaat-tctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaag 556  Q
    ||||||||||||||| |||||||||||  | |||||||| ||||| |||||||||||||| || ||||||| | |        |||||  || ||||||     
T  38499459 atatttaattcatttcatgttaaaaaaaatttaaattttagtaaacgaaccttttgtaatattataaacttgtttaaaaaaaatcgttttaagatttaat 38499558  T
Q  557 agtttaaggataattagagaaactttgttttaataggaactaaaacttcatataaatcatttttataggaactnnnnnnngctattaaaattaagtaaag 656  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||  ||| ||||| ||||||||||| |||        ||||||||||||||||| |    
T  38499559 agtttaaggataattagagaaactttgttttaatagggactaaaacaacatgtaaattatttttatagggactaaaaaaa-ctattaaaattaagtaagg 38499657  T
Q  657 attaaacttagaagtttcaaattttata 684  Q
    | |||||||||||||| |||||||||||    
T  38499658 actaaacttagaagttccaaattttata 38499685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 4e-31
Query Start/End: Original strand, 462 - 601
Target Start/End: Complemental strand, 7617537 - 7617398
Alignment:
Q  462 ttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaagagttt 561  Q
    ||||||| ||| |||||||||||||||||||||| ||||||||||||||  ||||||||||||||| |||        ||||||||||||||||||||||    
T  7617537 ttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcataatgttttaaacttgtcttaaaaaaatcgttcaaaaatttaagagttt 7617438  T
Q  562 aaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||| | |||||||||| ||||| | |||||||    
T  7617437 aaggataattaaacaaactttgttgtaataaggactaaaa 7617398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 9e-29
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 11670278 - 11670421
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||||||||||||||||  ||| ||||||||| ||| |||| ||||||| ||||       |||||||||| |||||||    
T  11670278 atatttaattcgtttcatgttaaaaaattctaaattttattaattgaacctttcgtagtgttctaaacttgtctcaaaaaattcgttcaaaattttaaga 11670377  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | ||||||||||||| |||| |||||||    
T  11670378 gtttaaggataattaaacaaactttgttttagtagggactaaaa 11670421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 9e-29
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 22068269 - 22068412
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||||| |||||||||| | ||||||||||||  || |||| ||||| ||||||       ||||||||||||||||||    
T  22068269 atatttaattcgtttcatgttaaaaaaatctaaattttagaaaatgaacctttcatagtgttctaaacatatctcaaaaaaatcgttcaaaaatttaaga 22068368  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||||||| ||| |||||||    
T  22068369 gtttaaggataattaaacaaactttgttttaaaagggactaaaa 22068412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 9e-29
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 25422238 - 25422381
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| |||||||||||||||||||||||||| |||| |||||||||  || |||| ||||||| ||||       ||||| ||||||||||||    
T  25422238 atatttaattcgttttatgttaaaaaattctaaattttagtaattgaacctttgatagtgttctaaacttgtctcaaaaaaatcgtttaaaaatttaaga 25422337  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||||||  ||| |||||||    
T  25422338 gtttaaggataattaaacaaactttgttttagcagggactaaaa 25422381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 9e-29
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 33177544 - 33177401
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||||||| |||  || | || ||||||| ||||       ||||||||||||||||||    
T  33177544 atatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacttttcatagtattctaaacttgtctcaaaaaaatcgttcaaaaatttaaga 33177445  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||| ||||||| |||||||    
T  33177444 gtttaaggataattaaacaaactttgttgtaatagggactaaaa 33177401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-27
Query Start/End: Original strand, 458 - 599
Target Start/End: Complemental strand, 30331401 - 30331260
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||  || |||| ||||||| | ||       ||||||||||||||||||    
T  30331401 atatttaattcgttttatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtttcaaaaaaatcgttcaaaaatttaaga 30331302  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaa 599  Q
    ||||||| ||||||| | |||||||||| ||| ||| |||||    
T  30331301 gtttaagaataattaaacaaactttgttgtaacagggactaa 30331260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-27
Query Start/End: Original strand, 456 - 601
Target Start/End: Complemental strand, 53571667 - 53571522
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaa 555  Q
    ||||||||||||| ||| ||||||||||||||||||||||  ||| |||||||||  || |||| ||||||| ||||       ||||||||||||||||    
T  53571667 ttatatttaattcgtttcatgttaaaaaattctaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaaaattcgttcaaaaatttaa 53571568  T
Q  556 gagtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||||||||| |||| | ||||||||||||| |||| |||||||    
T  53571567 gagtttaaggatgattaaacaaactttgttttagtagggactaaaa 53571522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 3e-25
Query Start/End: Original strand, 460 - 601
Target Start/End: Original strand, 55938242 - 55938382
Alignment:
Q  460 atttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaagagt 559  Q
    ||||||||| |||||||||||||||||||||||| | ||||| || ||||| ||| |||| ||||||||| ||       ||||| ||||||||||||||    
T  55938242 atttaattcgttttatgttaaaaaattctaaattctagtaaacga-cctttcgtagtgttctaaacttatttcaaaaaaatcgtttaaaaatttaagagt 55938340  T
Q  560 ttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||| | |||||||||| ||||||| |||||||    
T  55938341 ttaaggataattaaacaaactttgttgtaatagggactaaaa 55938382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 5e-24
Query Start/End: Original strand, 458 - 585
Target Start/End: Original strand, 47309606 - 47309733
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||   | |||| ||||||| ||||       ||||| ||||||||||||    
T  47309606 atatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcacagtgttctaaacttgtctcaaaaaaatcgtttaaaaatttaaga 47309705  T
Q  558 gtttaaggataattagagaaactttgtt 585  Q
    ||||||||||||||| | ||||||||||    
T  47309706 gtttaaggataattaaacaaactttgtt 47309733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-21
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 1870278 - 1870420
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||| |||| || |||| ||||||| |||        |||||||||||||||| |    
T  1870278 atatttaattcgttttatgttaaaaaattctaaattttagtaaatgaacattttatagtgttctaaacttgtct-taaaaaatcgttcaaaaatttaata 1870376  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||| ||| | ||||||| |||||  ||| |||||||    
T  1870377 gtttaaggatagttaaacaaactttattttagcagggactaaaa 1870420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-21
Query Start/End: Original strand, 458 - 585
Target Start/End: Complemental strand, 3873275 - 3873148
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||  ||| |||||||||||||||||||||| ||||||||||||||  || |||| ||||||| ||||       |||||||||||| |||||    
T  3873275 atatttaatttgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatgtaaga 3873176  T
Q  558 gtttaaggataattagagaaactttgtt 585  Q
    ||||||||||||||| | ||| ||||||    
T  3873175 gtttaaggataattaaacaaattttgtt 3873148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-21
Query Start/End: Original strand, 474 - 601
Target Start/End: Complemental strand, 28448498 - 28448371
Alignment:
Q  474 atgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaagagtttaaggataattag 573  Q
    ||||||||||||| |||||||| ||||||||||||||  || |||| ||||||| ||||       || ||||||||||||||||||||||||||||||     
T  28448498 atgttaaaaaattgtaaattttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatcattcaaaaatttaagagtttaaggataattaa 28448399  T
Q  574 agaaactttgttttaataggaactaaaa 601  Q
    | |||||||||| ||| ||| |||||||    
T  28448398 acaaactttgttgtaagagggactaaaa 28448371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-20
Query Start/End: Original strand, 458 - 587
Target Start/End: Complemental strand, 44209618 - 44209489
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| |||  |||||||| |||||||||||| |||| |||| ||||  || |||| ||||||| ||||       ||||||||||||||||||    
T  44209618 atatttaattcttttcgtgttaaaagattctaaattttagtaattgaatctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaaga 44209519  T
Q  558 gtttaaggataattagagaaactttgtttt 587  Q
    ||||||||||||||| | ||||||||||||    
T  44209518 gtttaaggataattaaacaaactttgtttt 44209489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 458 - 588
Target Start/End: Original strand, 31316712 - 31316843
Alignment:
Q  458 atatttaattcattttatgttaaaaaa-ttctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaag 556  Q
    ||||||||||  ||| ||||||||||| ||||||||||| |||| |||||||||  || |||| ||||||| ||||       ||||||| |||||||||    
T  31316712 atatttaatttgtttcatgttaaaaaaattctaaattttagtaattgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcagaaatttaag 31316811  T
Q  557 agtttaaggataattagagaaactttgtttta 588  Q
    |||||||||||||||| | |||||||||||||    
T  31316812 agtttaaggataattaaacaaactttgtttta 31316843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-18
Query Start/End: Original strand, 458 - 572
Target Start/End: Original strand, 19522884 - 19522998
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||  ||| |||||||||||||||||||||| ||||||||||||||  || |||| ||||||| |||        ||||||||||||||||||    
T  19522884 atatttaatttgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctaaaaaaaatcgttcaaaaatttaaga 19522983  T
Q  558 gtttaaggataatta 572  Q
    ||||||| |||||||    
T  19522984 gtttaagaataatta 19522998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-18
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 33689416 - 33689286
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| |||| |||||||||  || || | ||||||| ||||       ||||| ||||||||||||    
T  33689416 atatttaattcgtttcatgttaaaaaattctaaattttagtaattgaacctttcatagtgctctaaacttgtctcaaaaaaatcgtttaaaaatttaaga 33689317  T
Q  558 gtttaaggataattagagaaactttgtttta 588  Q
     |||||| ||||||| | |||||||||||||    
T  33689316 atttaagaataattaaacaaactttgtttta 33689286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 5e-18
Query Start/End: Original strand, 370 - 426
Target Start/End: Complemental strand, 27574643 - 27574587
Alignment:
Q  370 ttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtg 426  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27574643 ttatcttttcaattcaatatttattatttaattctattttaagatctttatcttgtg 27574587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-17
Query Start/End: Original strand, 458 - 684
Target Start/End: Complemental strand, 20650627 - 20650402
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||| |||| || |||||  |||||| || |       ||| | |||  |||||||    
T  20650627 atatttaattcatttcatgttaaaaaattctaaattttagtaaatgaatctttcgtgatgttccaaacttgtcccaagaaaatcgctaaaacttttaaga 20650528  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaacttcatataaatcatttttataggaactnnnnnnngctattaaaattaagtaaaga 657  Q
     ||||| |||||||| | ||||||||||||| |||| ||||||| | ||| ||| |  ||||| |||| |||       ||||||||||| |||| | ||    
T  20650527 ttttaaagataattaaacaaactttgttttagtagggactaaaattacatgtaatttgtttttgtagggact-aaaaaagctattaaaataaagtgagga 20650429  T
Q  658 ttaaacttagaagtttcaaattttata 684  Q
     |||||||| ||||| |||||||||||    
T  20650428 ctaaacttaaaagttccaaattttata 20650402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 369 - 427
Target Start/End: Complemental strand, 17354545 - 17354487
Alignment:
Q  369 cttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtgc 427  Q
    |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  17354545 cttatcttttcaatacaatatttattatttgattctattttaagatctttatcttgtgc 17354487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 23473600 - 23473458
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||  ||| ||||||||||||| |||||||| |||| |||||||||   | |||| ||||||||||||       ||||||||||||||||||    
T  23473600 atatttaatttgtttcatgttaaaaaattttaaattttagtaa-tgaacctttcacagtgttctaaacttatctcaaaaaaatcgttcaaaaatttaaga 23473502  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||  |||||||| | |||||||||||||  ||| |||||||    
T  23473501 gtttaccgataattaaacaaactttgttttagcagggactaaaa 23473458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 370 - 428
Target Start/End: Complemental strand, 40293632 - 40293574
Alignment:
Q  370 ttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtgcc 428  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  40293632 ttatcttttcaacgcaatatttattatttaattctattttaagatctttatcttatgcc 40293574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 458 - 572
Target Start/End: Original strand, 43938174 - 43938289
Alignment:
Q  458 atatttaattcattttatgttaaaa-aattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaag 556  Q
    ||||||||||| ||| ||||||||| ||||||||||||| ||||||||||||||  || |||| ||| ||| ||||       |||||||||||||||||    
T  43938174 atatttaattcgtttcatgttaaaaaaattctaaattttagtaaatgaacctttcatagtgttctaagcttgtctcaaaaaaatcgttcaaaaatttaag 43938273  T
Q  557 agtttaaggataatta 572  Q
    |||| |||||||||||    
T  43938274 agttaaaggataatta 43938289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-16
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 8753072 - 8753161
Alignment:
Q  18 ttaatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacattttcctt 107  Q
    |||||||||| ||||||||| ||  ||||||||||||||| ||| ||  ||||||||| ||| |||| ||||||||||||||||||||||    
T  8753072 ttaatgtgttgaatacacaaattttaagataaagtttctagttttaatttcttatcaaatgctctaatagcacttgttaacattttcctt 8753161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 3e-16
Query Start/End: Original strand, 29 - 106
Target Start/End: Original strand, 26009752 - 26009829
Alignment:
Q  29 aatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacattttcct 106  Q
    ||||||||| |||||||||||||||| || ||||||  |||||||||||| | |||| ||||||||||||||||||||    
T  26009752 aatacacaaattccaagataaagtttttactttaaatttcttatcaagtgtcttaagggcacttgttaacattttcct 26009829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-16
Query Start/End: Original strand, 458 - 527
Target Start/End: Original strand, 44452257 - 44452326
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||| |||| |||||||||||||||||||||| ||||| |||||||| |||||||| |||||||    
T  44452257 atatttaatttatttcatgttaaaaaattctaaattttagtaaacgaacctttagtaatgttctaaactt 44452326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 0.000000000000005
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 7490864 - 7491008
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaattt-aag 556  Q
    ||||||||||| ||| || |||||||| |||||| ||| |||| |||||||||| || |||| ||||||| |||        | |||||||||||| |||    
T  7490864 atatttaattcgtttcatcttaaaaaaatctaaactttagtaattgaaccttttatagtgttctaaacttgtctaaaaaaagttgttcaaaaattttaag 7490963  T
Q  557 agtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||||||||||||| | |||||||||| ||| ||| |||||||    
T  7490964 agtttaaggataattaaacaaactttgttgtaacagggactaaaa 7491008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 0.000000000000005
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 34513302 - 34513223
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatct 184  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||  |||||| ||| ||||||| ||||||||||||    
T  34513302 tttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtgtcaagaacattacgaaaagttcatct 34513223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 369 - 427
Target Start/End: Original strand, 6942266 - 6942324
Alignment:
Q  369 cttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtgc 427  Q
    |||||||| ||||| ||||||||||| ||||||| ||||||||||||||||||||||||    
T  6942266 cttatcttttcaatacaatatttattgtttaattttattttaagatctttatcttgtgc 6942324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 572
Target Start/End: Original strand, 44289850 - 44289964
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    |||||||||| |||| ||||||||||||| || ||||| ||||||||||||||  || |||| ||||||| | |        ||||| ||||||||||||    
T  44289850 atatttaatttatttcatgttaaaaaattatagattttagtaaatgaacctttcatagtgttctaaacttgtataaaaagaatcgttaaaaaatttaaga 44289949  T
Q  558 gtttaaggataatta 572  Q
    |||||||||||||||    
T  44289950 gtttaaggataatta 44289964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 540 - 601
Target Start/End: Complemental strand, 51395653 - 51395592
Alignment:
Q  540 tcgttcaaaaatttaagagtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| ||| ||| |||||||    
T  51395653 tcgttcaaaaatttaagagtttaaggataattaaacaaactttgttgtaacagggactaaaa 51395592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.0000000000003
Query Start/End: Original strand, 541 - 601
Target Start/End: Complemental strand, 38114277 - 38114217
Alignment:
Q  541 cgttcaaaaatttaagagtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||||||||||||||||||||||||||||| | |||||||||| ||| ||| |||||||    
T  38114277 cgttcaaaaatttaagagtttaaggataattaaacaaactttgttgtaacagggactaaaa 38114217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.0000000000003
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 53423688 - 53423556
Alignment:
Q  458 atatttaattcattttatgttaaaaaa--ttctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaa 555  Q
    |||||||||| |||| |||||||||||  ||||||||||| ||||||||||||||  || |||| ||||||| |||        | ||| ||||||||||    
T  53423688 atatttaatttatttcatgttaaaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtcttaaaagaattgttaaaaaatttaa 53423589  T
Q  556 gagtttaaggataattagagaaactttgtttta 588  Q
    ||||||||||||| ||| | ||||||| |||||    
T  53423588 gagtttaaggatagttaaacaaactttatttta 53423556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 10321867 - 10322010
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||| ||||| |||||||||||| |||| |||||||||   | |||| ||||||| | ||       | ||||||||||||||||    
T  10321867 atatttaattcttttcatgataaaatattctaaattttagtaattgaacctttcacagtgttctaaacttgtgtcaaaaaaattgttcaaaaatttaaga 10321966  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||| |||||||| | ||||||| |||||  ||| |||||||    
T  10321967 gtttaaagataattaaacaaacttttttttagcagggactaaaa 10322010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 458 - 588
Target Start/End: Original strand, 13603954 - 13604084
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaa-atttaag 556  Q
    |||||||||| |||| | |||||||| || | |||||| ||||||||||||||| ||||||| ||||||| |||        || || |||| |||||||    
T  13603954 atatttaatttatttcaagttaaaaa-ttatgaattttagtaaatgaaccttttataatgttataaacttgtctaaaaaatatcattaaaaaaatttaag 13604052  T
Q  557 agtttaaggataattagagaaactttgtttta 588  Q
    |||||||||||||||| | |||||||||||||    
T  13604053 agtttaaggataattaaacaaactttgtttta 13604084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 464 - 601
Target Start/End: Complemental strand, 3862606 - 3862468
Alignment:
Q  464 aattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctc-nnnnnnntcgttcaaaaatttaagagttta 562  Q
    ||||| ||| |||||||||||||||||||||| ||||||||||||||  |    || ||||||| ||||        ||||| |||||||||||||||||    
T  3862606 aattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatcgcattctaaacttgtctcaaaaaaaatcgttaaaaaatttaagagttta 3862507  T
Q  563 aggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||||||| | ||| |||||| ||| ||| |||||||    
T  3862506 aggataattaaacaaattttgttgtaacagggactaaaa 3862468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 464 - 601
Target Start/End: Complemental strand, 3871363 - 3871225
Alignment:
Q  464 aattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctc-nnnnnnntcgttcaaaaatttaagagttta 562  Q
    ||||| ||| |||||||||||||||||||||| ||||||||||||||  |    || ||||||| ||||        ||||| |||||||||||||||||    
T  3871363 aattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatcgcattctaaacttgtctcaaaaaaaatcgttaaaaaatttaagagttta 3871264  T
Q  563 aggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||||||| | ||| |||||| ||| ||| |||||||    
T  3871263 aggataattaaacaaattttgttgtaacagggactaaaa 3871225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 540 - 686
Target Start/End: Complemental strand, 13718035 - 13717890
Alignment:
Q  540 tcgttcaaaaatttaagagtttaaggataattagagaaactttgttttaataggaactaaaacttcatataaatcatttttataggaactnnnnnnngct 639  Q
    ||||||||||||||||||||||||||||||||| | ||||||| || ||| | | ||||||| |  |  |||||| ||||| |||| | |       | |    
T  13718035 tcgttcaaaaatttaagagtttaaggataattaaacaaacttttttgtaacatggactaaaattagaagtaaatcttttttgtagggattaaataacg-t 13717937  T
Q  640 attaaaattaagtaaagattaaacttagaagtttcaaattttataag 686  Q
    ||||||||||||||| ||||||| ||||||||| | |||||||||||    
T  13717936 attaaaattaagtaaggattaaatttagaagttcccaattttataag 13717890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 28163848 - 28163779
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    ||||| |||| |||| ||| |||| ||||||||||||| ||||| ||||||||||||||||| |||||||    
T  28163848 atattaaatttatttcatgctaaataattctaaattttagtaaacgaaccttttgtaatgttctaaactt 28163779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 34513141 - 34513072
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||| |||| ||| |||| ||||||||||||| ||||| |||||| |||||||||| |||||||    
T  34513141 atatttaatttatttcatgctaaataattctaaattttagtaaacgaacctcttgtaatgttctaaactt 34513072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 38499298 - 38499379
Alignment:
Q  106 tttgtttaattatgcttaactttt-aagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatctgc 186  Q
    |||||||||| ||| |||| |||| ||  |||||||||||||  ||| ||||||||||| ||||||||||||||||||||||    
T  38499298 tttgtttaatcatgtttaaatttttaacgttttgaacaattttttgcagaagtgttaagaacattactaaaagttcatctgc 38499379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 44452096 - 44452177
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatctgc 186  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||  |||| ||||| |||| || ||||||| ||||||    
T  44452096 tttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtattaagaacatcacgaaaagtttatctgc 44452177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 369 - 426
Target Start/End: Original strand, 48818500 - 48818557
Alignment:
Q  369 cttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtg 426  Q
    |||||||| |||||||| |||||||| |||||||||||||||||||| |||| |||||    
T  48818500 cttatcttttcaatgcattatttattgtttaattctattttaagatccttatgttgtg 48818557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 639 - 684
Target Start/End: Original strand, 55283460 - 55283505
Alignment:
Q  639 tattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||    
T  55283460 tattaaaattaagtaaagactaaacttagaagtttccaattttata 55283505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000007
Query Start/End: Original strand, 458 - 510
Target Start/End: Complemental strand, 47379299 - 47379247
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttt 510  Q
    ||||||||||||||| || || |||||||||||||||| ||||||||||||||    
T  47379299 atatttaattcatttcatttttaaaaattctaaattttagtaaatgaaccttt 47379247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 369 - 428
Target Start/End: Original strand, 6942496 - 6942555
Alignment:
Q  369 cttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtgcc 428  Q
    |||||||| ||||||| | ||||||| |||||||||||||| |||| |||||||||||||    
T  6942496 cttatcttttcaatgccacatttattttttaattctatttttagatttttatcttgtgcc 6942555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 107
Target Start/End: Original strand, 23568056 - 23568143
Alignment:
Q  20 aatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacattttcctt 107  Q
    ||||| || |||| |||| || |||||||||||||| |||| |||| |||||||||||||||  ||  ||||||||||||||| ||||    
T  23568056 aatgtattgaatatacaaatttcaagataaagtttccatttaaaacttcttatcaagtgcccctaggacacttgttaacatttccctt 23568143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 28164007 - 28163929
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatct 184  Q
    ||||||||||||||||||| ||||||| ||||||||||||||  |||   ||||||||| ||||||| ||||||||||||    
T  28164007 tttgtttaattatgcttaaacttttaaaattttgaacaattttttgc-acagtgttaagaacattacgaaaagttcatct 28163929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 378 - 425
Target Start/End: Original strand, 42600696 - 42600743
Alignment:
Q  378 tcaatgcaatatttattatttaattctattttaagatctttatcttgt 425  Q
    ||||||||||||||||| || |||| ||||||||||||||||||||||    
T  42600696 tcaatgcaatatttatttttaaattttattttaagatctttatcttgt 42600743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 370 - 420
Target Start/End: Complemental strand, 2075234 - 2075184
Alignment:
Q  370 ttatcttgtcaatgcaatatttattatttaattctattttaagatctttat 420  Q
    ||||||| | |||||||||||| |||||||||||||||||||||| |||||    
T  2075234 ttatctttttaatgcaatattttttatttaattctattttaagatttttat 2075184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 4850266 - 4850409
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||| ||||| ||| ||||| ||||||||||||| ||  |||||||| ||||  || |||| ||||  | ||||       ||||||||||||| ||||    
T  4850266 atattaaattcgtttcatgttgaaaaattctaaatattactaaatgaatctttcatattgttctaaatgtgtctcaataaaatcgttcaaaaattcaaga 4850365  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||| ||||||| | |||||||||||||  | |||||||||    
T  4850366 gtttaagaataattaaacaaactttgttttagcaagaactaaaa 4850409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 684
Target Start/End: Original strand, 22068449 - 22068495
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||||||||||||||| || |||||||||||||||| |||||||||    
T  22068449 ctattaaaattaagtaaggactaaacttagaagtttccaattttata 22068495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 33977817 - 33977875
Alignment:
Q  370 ttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtgcc 428  Q
    ||||||| ||||||||||||||||| ||||||| |||||||| ||| |||||| |||||    
T  33977817 ttatcttttcaatgcaatatttattttttaattatattttaatatccttatctcgtgcc 33977875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 369 - 426
Target Start/End: Original strand, 19594468 - 19594525
Alignment:
Q  369 cttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtg 426  Q
    |||||||| ||||| ||||||||||| | ||||||||||||||||||  |||||||||    
T  19594468 cttatcttttcaatacaatatttattgtataattctattttaagatccctatcttgtg 19594525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 28163241 - 28163282
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaattt 146  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  28163241 tttgtttaattatgcttaaacttttaagattttgaacaattt 28163282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 34512548 - 34512589
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaattt 146  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  34512548 tttgtttaattatgcttaaacttttaagattttgaacaattt 34512589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 540 - 585
Target Start/End: Complemental strand, 42972775 - 42972730
Alignment:
Q  540 tcgttcaaaaatttaagagtttaaggataattagagaaactttgtt 585  Q
    |||||||||||||||||||||||| |||||||| | ||||||||||    
T  42972775 tcgttcaaaaatttaagagtttaaagataattaaacaaactttgtt 42972730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 48738518 - 48738559
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaattt 146  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  48738518 tttgtttaattatgcttaaacttttaagattttgaacaattt 48738559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 638 - 686
Target Start/End: Original strand, 7499093 - 7499141
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttataag 686  Q
    |||||||||||||||||||| ||||||||||||||   |||||||||||    
T  7499093 ctattaaaattaagtaaagaataaacttagaagttctcaattttataag 7499141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 541 - 601
Target Start/End: Original strand, 10085739 - 10085799
Alignment:
Q  541 cgttcaaaaatttaagagtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||||||||||||||||||||||||||||| | |||  ||||||||  ||| |||||||    
T  10085739 cgttcaaaaatttaagagtttaaggataattaaaaaaaaattgttttagcagggactaaaa 10085799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 513
Target Start/End: Complemental strand, 35351788 - 35351732
Alignment:
Q  458 atatttaattcattttatgtta-aaaaattctaaattttggtaaatgaaccttttgt 513  Q
    ||||||||||||||  |||||| ||||||| |||||||| |||||||||||||||||    
T  35351788 atatttaattcattacatgttacaaaaattttaaattttagtaaatgaaccttttgt 35351732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 506
Target Start/End: Complemental strand, 38114335 - 38114287
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaac 506  Q
    ||||||||||| ||| ||||||||||||| |||||||| ||||||||||    
T  38114335 atatttaattcgtttcatgttaaaaaattttaaattttagtaaatgaac 38114287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000007
Query Start/End: Original strand, 378 - 421
Target Start/End: Original strand, 7162263 - 7162306
Alignment:
Q  378 tcaatgcaatatttattatttaattctattttaagatctttatc 421  Q
    |||||| |||||||||| |||||||||||||||||||| |||||    
T  7162263 tcaatgtaatatttattttttaattctattttaagatccttatc 7162306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000007
Query Start/End: Original strand, 458 - 505
Target Start/End: Complemental strand, 35060949 - 35060902
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaa 505  Q
    ||||||||||| ||| |||||||||||||||||||||| |||| ||||    
T  35060949 atatttaattcgtttcatgttaaaaaattctaaattttagtaattgaa 35060902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000007
Query Start/End: Original strand, 458 - 525
Target Start/End: Complemental strand, 48220010 - 48219943
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaac 525  Q
    |||||||||| ||||  |||||||||||||||||||||   ||||||||||||  ||||||| |||||    
T  48220010 atatttaattaatttcttgttaaaaaattctaaattttaacaaatgaacctttcataatgttctaaac 48219943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000007
Query Start/End: Original strand, 637 - 684
Target Start/End: Complemental strand, 52947707 - 52947660
Alignment:
Q  637 gctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    |||||||||||||||||| || |||||||||| ||||| |||||||||    
T  52947707 gctattaaaattaagtaaggactaaacttagatgtttccaattttata 52947660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000007
Query Start/End: Original strand, 458 - 524
Target Start/End: Complemental strand, 52947885 - 52947818
Alignment:
Q  458 atatttaattcattttatgttaaaaaa-ttctaaattttggtaaatgaaccttttgtaatgttttaaa 524  Q
    |||||||||| || | ||||||||||| ||||||||||| |||||||||| |||| ||||||| ||||    
T  52947885 atatttaatttatctcatgttaaaaaaattctaaattttagtaaatgaactttttataatgttctaaa 52947818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 378 - 424
Target Start/End: Complemental strand, 2720578 - 2720532
Alignment:
Q  378 tcaatgcaatatttattatttaattctattttaagatctttatcttg 424  Q
    ||||||||||||||| | |||||||||||||| ||||| ||||||||    
T  2720578 tcaatgcaatatttaatttttaattctatttttagatccttatcttg 2720532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 684
Target Start/End: Complemental strand, 28448334 - 28448288
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||||||||||||||| || |||||||||||||| | |||||||||    
T  28448334 ctattaaaattaagtaaggactaaacttagaagttcccaattttata 28448288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 497 - 527
Target Start/End: Complemental strand, 35351716 - 35351686
Alignment:
Q  497 gtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||||||||||||||||||||||||    
T  35351716 gtaaatgaaccttttgtaatgttttaaactt 35351686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 6e-33; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 6e-33
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 14201087 - 14200957
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||||| ||| ||| ||||       | ||||||||||||||||    
T  14201087 atatttaattcatttcatgttaaaaaattctaaattttattaaatgaaccttttgtaatgttctaagcttgtctcagaaaaattgttcaaaaatttaaga 14200988  T
Q  558 gtttaaggataattagagaaactttgtttta 588  Q
    ||||||||||||||| | |||||||||||||    
T  14200987 gtttaaggataattaaacaaactttgtttta 14200957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-26
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 20721352 - 20721209
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||||||||||||||||  ||| |||||||||  || |||| ||||||| ||||       ||||||||||||||||||    
T  20721352 atatttaattcgtttcatgttaaaaaattctaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaaaattcgttcaaaaatttaaga 20721253  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||| |||||||| | ||||||||||||| |||| |||||||    
T  20721252 gtttaacgataattaaacaaactttgttttagtagggactaaaa 20721209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-26
Query Start/End: Original strand, 458 - 589
Target Start/End: Original strand, 31771488 - 31771619
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||||||| ||||||||||||| |||||||| ||||||||| ||||  || |||| ||||||| | ||       ||||||||||||||||||    
T  31771488 atatttaattcatttcatgttaaaaaattttaaattttagtaaatgaaactttcatagtgttctaaacttgtgtcaaaaaaatcgttcaaaaatttaaga 31771587  T
Q  558 gtttaaggataattagagaaactttgttttaa 589  Q
    ||||||||||||||| | ||||||||||||||    
T  31771588 gtttaaggataattaaacaaactttgttttaa 31771619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 8e-26
Query Start/End: Original strand, 458 - 588
Target Start/End: Original strand, 18672363 - 18672493
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||||||| |||||||| |||| |||||||||  || |||| ||||||| ||||       ||||||||||||||||||    
T  18672363 atatttaattcgtttcatgttaaaaaattataaattttagtaattgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatttaaga 18672462  T
Q  558 gtttaaggataattagagaaactttgtttta 588  Q
    ||||||||||||||| | |||||||||||||    
T  18672463 gtttaaggataattaaacaaactttgtttta 18672493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 8e-26
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 43932857 - 43932727
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||||||||||||||||  ||| |||||||||  || |||| ||||||| ||||       ||||||||||||||||||    
T  43932857 atatttaattcgtttcatgttaaaaaattctaaattttaataattgaacctttcatattgttctaaacttctctcaaaaaaatcgttcaaaaatttaaga 43932758  T
Q  558 gtttaaggataattagagaaactttgtttta 588  Q
    ||||||||||||||| | |||||||||||||    
T  43932757 gtttaaggataattaaacaaactttgtttta 43932727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-25
Query Start/End: Original strand, 458 - 603
Target Start/End: Complemental strand, 42274424 - 42274279
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| || |||||||| |||||||||||||||||||||||||  ||||||| ||||||| |||        ||||||||||||||||||    
T  42274424 atatttaattcgtttcatattaaaaaaatctaaattttggtaaatgaacctttcataatgttctaaacttgtcttaaaaaaatcgttcaaaaatttaaga 42274325  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaact 603  Q
    ||||||||||||||| | ||| |||||| |||  || |||||||||    
T  42274324 gtttaaggataattaaacaaattttgttgtaactgggactaaaact 42274279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 5e-24
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 3043484 - 3043341
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||  ||||||||||||| ||||| |||||| ||||||||||||||  || |||| ||||||| ||||       ||||| ||||||||| ||    
T  3043484 atatttaattagttttatgttaaaatattctgaattttagtaaatgaacctttcatattgttctaaacttgtctcaaaaaattcgttaaaaaatttatga 3043385  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||| ||| |||||||||||    
T  3043384 gtttaaggataattaaacaaactttgttgtaacaggaactaaaa 3043341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-24
Query Start/End: Original strand, 458 - 593
Target Start/End: Original strand, 10357487 - 10357622
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| | |||||||||||||||||||| ||||||||||||||  || |||| ||||||| |||        ||||||||||||||||||    
T  10357487 atatttaattcgtttaaggttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctaaaaaaaatcgttcaaaaatttaaga 10357586  T
Q  558 gtttaaggataattagagaaactttgttttaatagg 593  Q
    |||||| |||||||| | |||||||||| |||||||    
T  10357587 gtttaaagataattaaacaaactttgttgtaatagg 10357622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-22
Query Start/End: Original strand, 458 - 582
Target Start/End: Complemental strand, 13372118 - 13371994
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||| ||||||||||| ||||||||||||||  || |||| ||||||| |||        ||||||||||||||||||    
T  13372118 atatttaattcgtttcatgttaaaaatttctaaattttagtaaatgaacctttcatagtgttctaaacttgtctaaaaaaaatcgttcaaaaatttaaga 13372019  T
Q  558 gtttaaggataattagagaaacttt 582  Q
    ||||||||||||||| | |||||||    
T  13372018 gtttaaggataattaaacaaacttt 13371994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-22
Query Start/End: Original strand, 462 - 582
Target Start/End: Original strand, 33031226 - 33031346
Alignment:
Q  462 ttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaagagttt 561  Q
    ||||||| ||| ||||||||||| |||||||||||||||||||||||||| || |||| ||||||| |||        |||||||||||||||||| |||    
T  33031226 ttaattcgtttcatgttaaaaaaatctaaattttggtaaatgaaccttttatagtgttctaaacttgtcttaaaaaaatcgttcaaaaatttaagaattt 33031325  T
Q  562 aaggataattagagaaacttt 582  Q
    ||||||||||| | |||||||    
T  33031326 aaggataattaaacaaacttt 33031346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-21
Query Start/End: Original strand, 458 - 585
Target Start/End: Original strand, 7439392 - 7439519
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||||||||||||||||  |||||||||||||  || |||| ||||||| ||||       ||||| ||||||||||||    
T  7439392 atatttaattcgtttcatgttaaaaaattctaaattttactaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatcgtttaaaaatttaaga 7439491  T
Q  558 gtttaaggataattagagaaactttgtt 585  Q
    ||||||| ||||||| | ||||||||||    
T  7439492 gtttaagaataattaaacaaactttgtt 7439519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-21
Query Start/End: Original strand, 458 - 584
Target Start/End: Original strand, 31436209 - 31436335
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||  || |||| ||||||| ||         |||||||||||||||||     
T  31436209 atatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttataaacttgtcataaaaaaatcgttcaaaaatttaagt 31436308  T
Q  558 gtttaaggataattagagaaactttgt 584  Q
    ||||||||||||||| | |||||||||    
T  31436309 gtttaaggataattaaacaaactttgt 31436335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 5e-21
Query Start/End: Original strand, 463 - 601
Target Start/End: Complemental strand, 44286802 - 44286664
Alignment:
Q  463 taattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaagagttta 562  Q
    |||||| ||| ||||||||||||| |||||||| ||||||||| ||||  || |||| |||| || ||||       |||||||||| ||||||||||||    
T  44286802 taattcgtttcatgttaaaaaattgtaaattttagtaaatgaatctttcatagtgttctaaatttgtctcaaaaaaatcgttcaaaagtttaagagttta 44286703  T
Q  563 aggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||||||| | |||||||||| ||||||| |||||||    
T  44286702 aggataattaaacaaactttgttgtaatagggactaaaa 44286664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-20
Query Start/End: Original strand, 456 - 601
Target Start/End: Complemental strand, 21439957 - 21439812
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaa 555  Q
    ||||||||||||| ||| | ||||||||| | ||||||||  ||| |||||||||  || |||| ||||||| ||||       || |||||||||||||    
T  21439957 ttatatttaattcgtttcaagttaaaaaaatttaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaaaattcattcaaaaatttaa 21439858  T
Q  556 gagtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||||| | ||||||||||||| |||| |||||||    
T  21439857 gagtttaaggataattaaacaaactttgttttagtagggactaaaa 21439812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-20
Query Start/End: Original strand, 458 - 587
Target Start/End: Original strand, 44493056 - 44493185
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||| ||| |||||||| |||| |||||||||  ||  ||| ||||||||||||       ||||||||||||||||||    
T  44493056 atatttaattcgtttgatgttaaaatattataaattttagtaattgaacctttcatagagttctaaacttatctcaataaaatcgttcaaaaatttaaga 44493155  T
Q  558 gtttaaggataattagagaaactttgtttt 587  Q
    ||||||||||||||| | ||||||| ||||    
T  44493156 gtttaaggataattaaacaaactttatttt 44493185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 8e-20
Query Start/End: Original strand, 459 - 603
Target Start/End: Original strand, 41120910 - 41121054
Alignment:
Q  459 tatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaagag 558  Q
    |||||||||| ||| ||||||||||| ||||||||||||||||||||| |||  || |||| ||||||| |||        |||||||||||||||||||    
T  41120910 tatttaattcgtttcatgttaaaaaagtctaaattttggtaaatgaacttttcatagtgttctaaacttgtcttaaaaaaatcgttcaaaaatttaagag 41121009  T
Q  559 tttaaggataattagagaaactttgttttaataggaactaaaact 603  Q
    ||||||| | || | |  ||||||||| ||||||| |||||||||    
T  41121010 tttaagggttatgaaaacaactttgttgtaatagggactaaaact 41121054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-18
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 40365007 - 40364877
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||||||||||   || |||| ||||||| |||        ||||||||||||||||||    
T  40365007 atatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaaccttcaatagtgttctaaacttgtcttaaaaaaatcgttcaaaaatttaaga 40364908  T
Q  558 gtttaaggataattagagaaactttgtttta 588  Q
    |||| |||||| ||| | ||||||| |||||    
T  40364907 gtttgaggatagttaaacaaactttatttta 40364877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000005
Query Start/End: Original strand, 369 - 428
Target Start/End: Original strand, 9707134 - 9707193
Alignment:
Q  369 cttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtgcc 428  Q
    |||||||| ||||||||| ||||||| |||||||||||||| ||||||||||||||||||    
T  9707134 cttatcttttcaatgcaacatttattttttaattctatttttagatctttatcttgtgcc 9707193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 0.000000000000005
Query Start/End: Original strand, 369 - 428
Target Start/End: Original strand, 43592743 - 43592802
Alignment:
Q  369 cttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtgcc 428  Q
    |||||||| ||||| ||||||||||| ||| |||||||||||||||||||||||||||||    
T  43592743 cttatcttttcaatacaatatttattgtttcattctattttaagatctttatcttgtgcc 43592802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 585
Target Start/End: Complemental strand, 8737934 - 8737807
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||||| | |||||||| ||||| ||||||||  || |||| ||||||| |||         |||||||||||||||||    
T  8737934 atatttaattcgtttcatgttaaaaaaatttaaattttagtaaacgaacctttcatagtgttctaaacttttctaaaaaaaaccgttcaaaaatttaaga 8737835  T
Q  558 gtttaaggataattagagaaactttgtt 585  Q
     |||||||||||||| | ||||||||||    
T  8737834 ttttaaggataattaaataaactttgtt 8737807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 32318226 - 32318308
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcct-gcggaagtgttaagcacattactaaaagttcatctgc 186  Q
    ||||||||||||||||||| ||||||||||||||||||||||  | ||  |||||||||| ||||||| ||||||||||||||    
T  32318226 tttgtttaattatgcttaaacttttaagattttgaacaatttttttgcacaagtgttaagaacattacgaaaagttcatctgc 32318308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 527
Target Start/End: Original strand, 3118146 - 3118214
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||| |||| |||||||||||||||||| ||| ||||| ||||||||||||||||| |||||||    
T  3118146 atatttaatttatttcatgttaaaaaattctaaa-tttagtaaacgaaccttttgtaatgttctaaactt 3118214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 511
Target Start/End: Complemental strand, 29809453 - 29809400
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaacctttt 511  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||||||||||||    
T  29809453 atatttaattcctttcatgttaaaaaattctaaattttagtaaatgaacctttt 29809400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 572
Target Start/End: Complemental strand, 33832246 - 33832133
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| || ||||||||||||||||||| ||||||||||||||  || |||| ||||||| ||         ||||| ||||||||||||    
T  33832246 atatttaattcgtttcat-ttaaaaaattctaaattttagtaaatgaacctttcatagtgttataaacttgtcataaaaaaatcgtttaaaaatttaaga 33832148  T
Q  558 gtttaaggataatta 572  Q
    |||||||||||||||    
T  33832147 gtttaaggataatta 33832133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 11074566 - 11074642
Alignment:
Q  20 aatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgtta 96  Q
    |||||||| ||||||||| | |||||| ||| |||||| ||||||| ||||||||||||| ||||| ||||||||||    
T  11074566 aatgtgttgaatacacaaatcccaagaaaaaatttctactttaaacttcttatcaagtgctctaagggcacttgtta 11074642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.0000000000003
Query Start/End: Original strand, 458 - 529
Target Start/End: Complemental strand, 32319067 - 32318995
Alignment:
Q  458 atatttaattcattttatgttaaaaaa-ttctaaattttggtaaatgaaccttttgtaatgttttaaacttat 529  Q
    |||||||||| |||| ||||||||||| ||||||| ||| |||||||||||||| |||||||| |||||||||    
T  32319067 atatttaatttatttcatgttaaaaaaattctaaaatttagtaaatgaacctttagtaatgttctaaacttat 32318995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 9111579 - 9111658
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatct 184  Q
    ||||||||||||||||||| |||||||||||| |||||| ||  |||  |||||||||| ||||||| ||||||||||||    
T  9111579 tttgtttaattatgcttaaacttttaagatttagaacaactttttgcacaagtgttaagaacattacgaaaagttcatct 9111658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 369 - 428
Target Start/End: Complemental strand, 9886898 - 9886839
Alignment:
Q  369 cttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtgcc 428  Q
    |||||||| ||||| ||||||| ||||||||||||||||||||||| | |||||||||||    
T  9886898 cttatcttttcaatacaatattaattatttaattctattttaagatatctatcttgtgcc 9886839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 11069700 - 11069759
Alignment:
Q  43 aagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacattt 102  Q
    ||||| ||||||| ||||||||| |||||||||||||||||| | |||||||||||||||    
T  11069700 aagatgaagtttccattttaaacttcttatcaagtgccctaaaaacacttgttaacattt 11069759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 42487792 - 42487648
Alignment:
Q  458 atatttaattcattttatgttaaaaaat-tctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaag 556  Q
    ||||| ||||||||| |||||||||||  | |||||||| |||| |||||||||  ||  ||||||||||| ||||       || ||||||||||||||    
T  42487792 atattgaattcatttcatgttaaaaaaaatttaaattttagtaattgaacctttcatagcgttttaaacttgtctcaaaaaaatcattcaaaaatttaag 42487693  T
Q  557 agtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||| |||||| | | |||||||||||||  ||| |||||||    
T  42487692 agtttaaagataatcaaacaaactttgttttagcagggactaaaa 42487648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 481 - 568
Target Start/End: Complemental strand, 3118732 - 3118645
Alignment:
Q  481 aaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaagagtttaaggata 568  Q
    ||||||||||||||| |||||| |||||||||||||||| ||||||| | ||       ||||| |||| ||||||||||||||||||    
T  3118732 aaaattctaaattttagtaaataaaccttttgtaatgttctaaacttgtatcaaaaaattcgttaaaaattttaagagtttaaggata 3118645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 458 - 585
Target Start/End: Complemental strand, 44879841 - 44879714
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||||| ||||||||||| ||||||||| |||  || |||| |||| || |||        ||||||||||||||||||    
T  44879841 atatttaattcgtttcatgttaaaaaaatctaaattttgttaaatgaacttttcatagtgttctaaatttgtcttaaaaaaatcgttcaaaaatttaaga 44879742  T
Q  558 gtttaaggataattagagaaactttgtt 585  Q
    |||||  |||| ||| | ||||||||||    
T  44879741 gtttagagatagttaaacaaactttgtt 44879714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 3117984 - 3118065
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatctgc 186  Q
    |||||||||||||| |||| ||||||||||||||||||| ||  |||  || ||||||| ||||||| ||||||||||||||    
T  3117984 tttgtttaattatgtttaaacttttaagattttgaacaaattattgcacaaatgttaagaacattacgaaaagttcatctgc 3118065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 540 - 585
Target Start/End: Original strand, 25100838 - 25100883
Alignment:
Q  540 tcgttcaaaaatttaagagtttaaggataattagagaaactttgtt 585  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||    
T  25100838 tcgttcaaaaatttaagagtttaaggataattaaacaaactttgtt 25100883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 32319229 - 32319148
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatctgc 186  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||  |||||||||| |||| |  ||||||| ||||||    
T  32319229 tttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacatcatgaaaagtttatctgc 32319148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 8741038 - 8741118
Alignment:
Q  18 ttaatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaac 98  Q
    ||||||| || ||||||||| |||||||||||| |||||||||||||| | |||| ||||| | |||  ||||||||||||    
T  8741038 ttaatgtattgaatacacaaattccaagataaaatttctattttaaacttgttataaagtgtcgtaaaggcacttgttaac 8741118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000007
Query Start/End: Original strand, 456 - 572
Target Start/End: Complemental strand, 13027568 - 13027451
Alignment:
Q  456 ttatatttaattcattttatgttaaaaa-attctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaattta 554  Q
    ||||| ||||||||| | |||||||||| | | | |||||| ||||| ||||||||| ||||||| ||||| | ||||       | |||||||||||||    
T  13027568 ttatacttaattcatctcatgttaaaaagaatttcaattttagtaaacgaaccttttataatgttctaaacgtgtctccgaaaaattgttcaaaaattta 13027469  T
Q  555 agagtttaaggataatta 572  Q
    ||||||||||||||||||    
T  13027468 agagtttaaggataatta 13027451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000007
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 20720120 - 20720256
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||||||| |  ||||||||||||||||||| |||| |||||| |       ||| ||||||| ||||       ||||||||||||||||||    
T  20720120 atatttaattcatttcaaattaaaaaattctaaattttagtaattgaaccgt-------gttctaaacttgtctcaaaaaaatcgttcaaaaatttaaga 20720212  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||  ||||||| | |||||||||||||  ||| |||||||    
T  20720213 gtttaaaaataattaaacaaactttgttttagaagggactaaaa 20720256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000007
Query Start/End: Original strand, 458 - 506
Target Start/End: Original strand, 30784356 - 30784404
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaac 506  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||||||    
T  30784356 atatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaac 30784404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000007
Query Start/End: Original strand, 540 - 584
Target Start/End: Original strand, 35498806 - 35498850
Alignment:
Q  540 tcgttcaaaaatttaagagtttaaggataattagagaaactttgt 584  Q
    ||||||||||||||||||||||||||||||||| | |||||||||    
T  35498806 tcgttcaaaaatttaagagtttaaggataattaaacaaactttgt 35498850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 182
Target Start/End: Complemental strand, 44286935 - 44286887
Alignment:
Q  134 ttttgaacaatttcctgcggaagtgttaagcacattactaaaagttcat 182  Q
    |||||||||||||  |||||| |||||||||||||||||||||||||||    
T  44286935 ttttgaacaattttttgcggacgtgttaagcacattactaaaagttcat 44286887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 385 - 428
Target Start/End: Complemental strand, 35813829 - 35813786
Alignment:
Q  385 aatatttattatttaattctattttaagatctttatcttgtgcc 428  Q
    |||||||||| |||| ||||||||||||||||||||||||||||    
T  35813829 aatatttattgtttatttctattttaagatctttatcttgtgcc 35813786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 369 - 427
Target Start/End: Original strand, 7721628 - 7721686
Alignment:
Q  369 cttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtgc 427  Q
    |||||||| ||||||||| ||||||| |||||||||||||| ||||| |||| ||||||    
T  7721628 cttatcttttcaatgcaacatttattttttaattctatttttagatcattatattgtgc 7721686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 684
Target Start/End: Complemental strand, 8737771 - 8737725
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||||||||||||||| ||||||||||||||||| | |||||||||    
T  8737771 ctattaaaattaagtaaggattaaacttagaagttcccaattttata 8737725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 684
Target Start/End: Complemental strand, 13371939 - 13371893
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||||||||||||||| ||||||||||| ||||||| |||||||||    
T  13371939 ctattaaaattaagtaaggattaaacttaaaagtttccaattttata 13371893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 385 - 426
Target Start/End: Original strand, 4283491 - 4283532
Alignment:
Q  385 aatatttattatttaattctattttaagatctttatcttgtg 426  Q
    |||||||||||||||||||||||| ||||| |||||||||||    
T  4283491 aatatttattatttaattctatttcaagatatttatcttgtg 4283532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 540 - 585
Target Start/End: Complemental strand, 29809295 - 29809250
Alignment:
Q  540 tcgttcaaaaatttaagagtttaaggataattagagaaactttgtt 585  Q
    |||||| |||||||||||||||||||||||||| | ||||||||||    
T  29809295 tcgttccaaaatttaagagtttaaggataattaaacaaactttgtt 29809250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 527
Target Start/End: Original strand, 32318389 - 32318458
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||| |||| || |||||||||||||||||||  |||| || || ||||||||||| |||||||    
T  32318389 atatttaatttatttcatattaaaaaattctaaattttattaaacgagccgtttgtaatgttctaaactt 32318458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 429
Target Start/End: Original strand, 8335278 - 8335338
Alignment:
Q  369 cttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtgcct 429  Q
    ||||| || ||||||||| ||||||| |||||||||||||| ||||| || ||||||||||    
T  8335278 cttatattttcaatgcaacatttattttttaattctatttttagatccttctcttgtgcct 8335338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 386 - 426
Target Start/End: Original strand, 33441823 - 33441863
Alignment:
Q  386 atatttattatttaattctattttaagatctttatcttgtg 426  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  33441823 atatttattatttacttctattttaagatctttattttgtg 33441863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 506
Target Start/End: Complemental strand, 37593002 - 37592954
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaac 506  Q
    ||||||||| | ||| |||||||||||||||||||||| ||||||||||    
T  37593002 atatttaatccgtttcatgttaaaaaattctaaattttagtaaatgaac 37592954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 102
Target Start/End: Complemental strand, 38788754 - 38788710
Alignment:
Q  58 ttttaaacctcttatcaagtgccctaagagcacttgttaacattt 102  Q
    |||||||||| |||||||||||| |||| ||||||||||||||||    
T  38788754 ttttaaaccttttatcaagtgccttaagggcacttgttaacattt 38788710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 369 - 425
Target Start/End: Original strand, 43664850 - 43664906
Alignment:
Q  369 cttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgt 425  Q
    ||||| || |||||| |||||||||| |||||||||||||| ||||| |||||||||    
T  43664850 cttatattttcaatgtaatatttattttttaattctatttttagatcattatcttgt 43664906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 519
Target Start/End: Original strand, 23496734 - 23496793
Alignment:
Q  460 atttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgtt 519  Q
    ||||||||||| | ||||||||||||| || ||||| |||||||||| |||| |||||||    
T  23496734 atttaattcatctcatgttaaaaaattatatattttagtaaatgaacattttataatgtt 23496793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 392 - 426
Target Start/End: Original strand, 433649 - 433683
Alignment:
Q  392 attatttaattctattttaagatctttatcttgtg 426  Q
    ||||||||||| |||||||||||||||||||||||    
T  433649 attatttaattttattttaagatctttatcttgtg 433683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 456 - 494
Target Start/End: Original strand, 6751292 - 6751330
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaattt 494  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  6751292 ttatatttaatttattttttgttaaaaaattctaaattt 6751330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 684
Target Start/End: Original strand, 7439571 - 7439617
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||| ||||||||||| ||||||||||| ||||||| |||||||||    
T  7439571 ctatttaaattaagtaaggattaaacttataagtttccaattttata 7439617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 524
Target Start/End: Complemental strand, 8392448 - 8392382
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaa 524  Q
    |||||||||| |||| | |||||||||||||| |||||  |||||||||||||| || |||| ||||    
T  8392448 atatttaatttatttcacgttaaaaaattctagattttattaaatgaaccttttatattgttctaaa 8392382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 676
Target Start/End: Complemental strand, 10357267 - 10357229
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaa 676  Q
    ||||||||||||||||||||||||||||| |||| ||||    
T  10357267 ctattaaaattaagtaaagattaaacttaaaagtctcaa 10357229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 10357325 - 10357407
Alignment:
Q  106 tttgtttaatt-atgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatctgc 186  Q
    ||||||||||| |||||||| || || || |||||||||||||  ||| || |||||||| |||||||||||||||| |||||    
T  10357325 tttgtttaatttatgcttaaactcttgagtttttgaacaattttttgcagacgtgttaagaacattactaaaagttcctctgc 10357407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 684
Target Start/End: Original strand, 10357667 - 10357713
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    |||||||||| |||||| || |||||||||||||||| |||||||||    
T  10357667 ctattaaaatcaagtaaggactaaacttagaagtttccaattttata 10357713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 369 - 415
Target Start/End: Original strand, 28226222 - 28226268
Alignment:
Q  369 cttatcttgtcaatgcaatatttattatttaattctattttaagatc 415  Q
    |||||||| |||||  |||||||||| ||||||||||||||||||||    
T  28226222 cttatcttttcaatataatatttattgtttaattctattttaagatc 28226268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 30784195 - 30784277
Alignment:
Q  106 tttgtttaatt-atgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatctgc 186  Q
    ||||||||||| |||||||| || ||||| ||| |||||||||  ||| || |||||||| ||||||||||||| ||||||||    
T  30784195 tttgtttaatttatgcttaaactcttaagttttagaacaattttttgcagacgtgttaagaacattactaaaagctcatctgc 30784277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 684
Target Start/End: Original strand, 33031366 - 33031412
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||||||||||||||| || |||||||||||||| | |||||||||    
T  33031366 ctattaaaattaagtaatgactaaacttagaagttcctaattttata 33031412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 684
Target Start/End: Complemental strand, 33832068 - 33832022
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||||||||||||||| || |||||||||||||| | |||||||||    
T  33832068 ctattaaaattaagtaaggactaaacttagaagttcccaattttata 33832022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 41120748 - 41120830
Alignment:
Q  106 tttgtttaatt-atgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatctgc 186  Q
    ||||||||||| |||||||| ||||| || |||| ||||||||  ||| || |||||||| |||||||||||||||| |||||    
T  41120748 tttgtttaatttatgcttaaacttttgagtttttaaacaattttttgcagacgtgttaagaacattactaaaagttcctctgc 41120830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1160 (Bit Score: 71; Significance: 4e-31; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 71; E-Value: 4e-31
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 1332 - 1475
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||  || |||| |||||||  |||       ||||||||||||||||||    
T  1332 atatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgcctcaaaaaaatcgttcaaaaatttaaga 1431  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||| ||||||| |||||||    
T  1432 gtttaaggataattaaacaaactttgttgtaatagggactaaaa 1475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 9e-29; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 9e-29
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 45419908 - 45419765
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    |||||||| |||||| |||||||||||||||||||||| ||||||||||||||  ||||||| ||||||| |||        ||||||||||||||||||    
T  45419908 atatttaactcatttaatgttaaaaaattctaaattttagtaaatgaacctttcataatgttctaaacttgtctaaaaaaaatcgttcaaaaatttaaga 45419809  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||| |||||||| | |||||||||| ||| ||| |||||||    
T  45419808 gtttaaagataattaaacaaactttgttgtaacagggactaaaa 45419765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-26
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 32943158 - 32943301
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| || ||||||||||||||||||| |||| |||||||||  || ||||  |||||| ||||       ||||||||||||||||||    
T  32943158 atatttaattcttttaatattaaaaaattctaaattttagtaattgaacctttcatagtgttcaaaacttgtctcaaaaaaatcgttcaaaaatttaaga 32943257  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | ||||||||||||| |||| |||||||    
T  32943258 gtttaaggataattaaacaaactttgttttagtagggactaaaa 32943301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-26
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 50615207 - 50615064
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||||||||||||||||  ||| |||||||||  || |||| ||||||| ||||       ||||||||||||||||||    
T  50615207 atatttaattcgtttcatgttaaaaaattctaaatttttttaattgaacctttcatagtgttctaaacttgtctcaaaaaattcgttcaaaaatttaaga 50615108  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||| ||||| | ||||||||||||| |||| |||||||    
T  50615107 gtttaaggaaaattaaacaaactttgttttagtagggactaaaa 50615064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-24
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 44808963 - 44808819
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatct-cnnnnnnntcgttcaaaaatttaag 556  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||  || |||| ||||| | |||         |||||||||||||||||    
T  44808963 atatttaattcattttatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttataaacctgtctaaaaaaaaatcgttcaaaaatttaag 44808864  T
Q  557 agtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||||||||||||  | |||||||||| ||| | |||||||||    
T  44808863 agtttaaggataattgaacaaactttgttgtaacatgaactaaaa 44808819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 8e-23
Query Start/End: Original strand, 458 - 571
Target Start/End: Original strand, 25250186 - 25250299
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||  || |||| ||||||| ||||       || |||||||||||||||    
T  25250186 atatttaattcgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatcattcaaaaatttaaga 25250285  T
Q  558 gtttaaggataatt 571  Q
    ||||||||||||||    
T  25250286 gtttaaggataatt 25250299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 1e-21
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 11293966 - 11294109
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| || ||||||||||||||||||| |||||||||| |||  || |||| ||||||| | |        ||||||||||||||||||    
T  11293966 atatttaattcgtttcatcttaaaaaattctaaattttagtaaatgaacttttcatagtgttctaaacttgtgtaaaagaagtcgttcaaaaatttaaga 11294065  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||| || |||| |||||||    
T  11294066 gtttaaggataattaaacaaactttgttgtactagggactaaaa 11294109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 5e-21
Query Start/End: Original strand, 458 - 603
Target Start/End: Original strand, 37179113 - 37179259
Alignment:
Q  458 atatttaattcattttatgttaaaaaa-ttctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaag 556  Q
    ||||||||||| ||| ||||||||||| ||||||||||| |||| |||||||||  || |||| ||||||| ||||       |||||||||| ||||||    
T  37179113 atatttaattcgtttgatgttaaaaaaattctaaattttagtaattgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaattttaag 37179212  T
Q  557 agtttaaggataattagagaaactttgttttaataggaactaaaact 603  Q
    | |||||||||||||| | |||||||||||||  || ||||||||||    
T  37179213 aatttaaggataattaaacaaactttgttttagcagtaactaaaact 37179259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-21
Query Start/End: Original strand, 458 - 584
Target Start/End: Complemental strand, 53517907 - 53517781
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||| ||||||||||| ||||||||||||||  || |||| ||||||||||         |||||||||||||||| |    
T  53517907 atatttaattcgtttcatgttaaaaatttctaaattttagtaaatgaacctttcatagtgttataaacttatcataaaaaaatcgttcaaaaatttaaaa 53517808  T
Q  558 gtttaaggataattagagaaactttgt 584  Q
    ||||||||||||||| | |||||||||    
T  53517807 gtttaaggataattaaacaaactttgt 53517781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 8e-20
Query Start/End: Original strand, 461 - 601
Target Start/End: Complemental strand, 117567 - 117427
Alignment:
Q  461 tttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaagagtt 560  Q
    |||||||| ||| ||||||||||| | ||||||||  ||| |||||||||  || |||| ||||||| ||||       || ||||||||||||||||||    
T  117567 tttaattcgtttcatgttaaaaaaatttaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaaaattcattcaaaaatttaagagtt 117468  T
Q  561 taaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||||||||| | ||||||||||||| |||| |||||||    
T  117467 taaggataattaaacaaactttgttttagtagggactaaaa 117427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 11045576 - 11045718
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||||||| |||||||||||||||||| ||||||||||||||   | | || ||||||| ||||       |||| |||||||||||||    
T  11045576 atatttaattcgttttatggtaaaaaattctaaattttagtaaatgaacctttctcactattctaaacttgtctcaaaaaaatcgtacaaaaatttaaga 11045675  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | ||||||  || ||||||| |||||||    
T  11045676 gtttaaggataatta-acaaacttgattgtaatagggactaaaa 11045718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 29348445 - 29348587
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||| ||| |||||||||||||||||||||||||| ||||||||||||||  || |||| |||| || |||        ||||||||||||||||||    
T  29348445 atatttagttcgttttatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttataaatttgtct-aaaaaaatcgttcaaaaatttaaga 29348543  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||  ||||||| | |||||||||| ||| ||| |||||||    
T  29348544 gtttaaatataattaaacaaactttgttgtaacagggactaaaa 29348587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-18
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 8576024 - 8575955
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    ||||||||||||||| |||||||||||||||||||||| ||||| |||||| |||||||||| |||||||    
T  8576024 atatttaattcatttcatgttaaaaaattctaaattttagtaaacgaacctcttgtaatgttctaaactt 8575955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-18
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 12402381 - 12402284
Alignment:
Q  18 ttaatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacattttcctttgtttaat 115  Q
    ||||| ||||||||||||||| | ||||| ||| ||||||||| |||| | |||||||||| |||| |||||||||||||||||| ||||| ||||||    
T  12402381 ttaatatgttaaatacacaaggttcaagaaaaaatttctatttaaaacttattatcaagtgtcctatgagcacttgttaacatttccctttttttaat 12402284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-18
Query Start/End: Original strand, 458 - 588
Target Start/End: Original strand, 27492486 - 27492616
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||| |||||||||||||||  ||||||||| |||  || |||| ||||||| ||||       ||||||||||||||  ||    
T  27492486 atatttaattcgtttcatgttagaaaattctaaattttaataaatgaacatttcatagtgttctaaacttgtctcaaaaatatcgttcaaaaatttggga 27492585  T
Q  558 gtttaaggataattagagaaactttgtttta 588  Q
    ||||||||||||||| | |||||||||||||    
T  27492586 gtttaaggataattaaacaaactttgtttta 27492616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-18
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 44555927 - 44556008
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatctgc 186  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||  |||||||||| ||||||| ||||||||||||||    
T  44555927 tttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatctgc 44556008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-18
Query Start/End: Original strand, 458 - 572
Target Start/End: Original strand, 45406835 - 45406949
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    |||||||||||  || |||||| ||||||||||||||| ||||||||||||||  || |||| ||||||| |||        ||||||||||||||||||    
T  45406835 atatttaattcgattcatgttagaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttttcttataaaaatcgttcaaaaatttaaga 45406934  T
Q  558 gtttaaggataatta 572  Q
    |||||||||||||||    
T  45406935 gtttaaggataatta 45406949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 5e-18
Query Start/End: Original strand, 458 - 583
Target Start/End: Complemental strand, 23921196 - 23921073
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| | |||||| |||||  || |||| |||||||||||        ||||||||||||||||||    
T  23921196 atatttaattc-tttcatgttaaaaaattctaaattttagaaaatgagcctttcatagtgttataaacttatct-aaaaaaatcgttcaaaaatttaaga 23921099  T
Q  558 gtttaaggataattagagaaactttg 583  Q
    ||||||||||||||| | ||||||||    
T  23921098 gtttaaggataattaaacaaactttg 23921073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-17
Query Start/End: Original strand, 458 - 594
Target Start/End: Complemental strand, 23883513 - 23883377
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||||||| ||||| || ||||||||||||||| || |||| ||||||| |||        | |||| |||||||||||    
T  23883513 atatttaattcgtttcatgttaaaaaattgtaaatattagtaaatgaaccttttatagtgttctaaacttgtctaaaaaaaattgttctaaaatttaaga 23883414  T
Q  558 gtttaaggataattagagaaactttgttttaatagga 594  Q
    ||||||| ||||||| | |||||||||| ||| ||||    
T  23883413 gtttaagaataattaaacaaactttgttataacagga 23883377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-17
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 33475479 - 33475558
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatct 184  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||  |||||||||| ||||||| ||||||||||||    
T  33475479 tttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatct 33475558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-17
Query Start/End: Original strand, 456 - 527
Target Start/End: Complemental strand, 33476314 - 33476243
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||||| |||| |||||||||||||||||||||| ||||| |||||||| |||||||| |||||||    
T  33476314 ttatatttaatttatttcatgttaaaaaattctaaattttagtaaacgaacctttagtaatgttctaaactt 33476243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 458 - 524
Target Start/End: Original strand, 34995702 - 34995768
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaa 524  Q
    ||||||||||||| | |||||||||||||||||||||| ||||||||||||||| ||||||| ||||    
T  34995702 atatttaattcatctcatgttaaaaaattctaaattttagtaaatgaaccttttataatgttctaaa 34995768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 38174074 - 38174217
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||||| | |||||||| ||| ||||||||||  || |||| ||||||| | ||       |||||||| |||||||||    
T  38174074 atatttaattcgtttcatgttaaaaaaatttaaattttagtatatgaacctttcatagtgttctaaacttgtttcaaaaaaatcgttcaataatttaaga 38174173  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||| |||||||| | |||||||||| ||| ||| |||||||    
T  38174174 gtttaaagataattaaataaactttgttataacagggactaaaa 38174217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 458 - 585
Target Start/End: Complemental strand, 40762723 - 40762596
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||||||| |||||||||||||||| ||||| |||| |||| ||||  || |||| ||||||| | |        |||||||||| |||||||    
T  40762723 atatttaattcatttcatgttaaaaaattctagattttagtaattgaatctttcatagtgttctaaacttgtttaaaaaaaatcgttcaaaattttaaga 40762624  T
Q  558 gtttaaggataattagagaaactttgtt 585  Q
    ||||||||||||||| | ||||||||||    
T  40762623 gtttaaggataattaaacaaactttgtt 40762596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 458 - 593
Target Start/End: Complemental strand, 44557702 - 44557567
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||   ||||||||  ||| |||||||||  || |||| ||||||| ||||       ||||||||||||||||||    
T  44557702 atatttaattcgtttcatgttaaaaaaaattaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaaaattcgttcaaaaatttaaga 44557603  T
Q  558 gtttaaggataattagagaaactttgttttaatagg 593  Q
    | ||||||||||||| | ||||||||||||| ||||    
T  44557602 gattaaggataattaaacaaactttgttttagtagg 44557567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-16
Query Start/End: Original strand, 458 - 527
Target Start/End: Original strand, 41927430 - 41927499
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||| |||| |||||||||||||||||||||  ||||| ||||||||||||||||| |||||||    
T  41927430 atatttaatttatttcatgttaaaaaattctaaatttcagtaaacgaaccttttgtaatgttctaaactt 41927499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-16
Query Start/End: Original strand, 458 - 527
Target Start/End: Complemental strand, 44556758 - 44556689
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||| |||| |||||||||||||||||||||| ||||| |||||||| |||||||| |||||||    
T  44556758 atatttaatttatttcatgttaaaaaattctaaattttagtaaacgaacctttagtaatgttctaaactt 44556689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 3e-16
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 45235467 - 45235337
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||| |||||||||||| |||| |||||||||   | |||| ||||||| ||||        |||| ||||||||||||    
T  45235467 atatttaattcgtttcatgttaaaatattctaaattttagtaattgaacctttcaaagtgttctaaacttgtctcaataaaaccgttaaaaaatttaaga 45235368  T
Q  558 gtttaaggataattagagaaactttgtttta 588  Q
    ||||| ||||||||| | |||||||||||||    
T  45235367 gtttatggataattaaacaaactttgtttta 45235337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 3e-16
Query Start/End: Original strand, 456 - 684
Target Start/End: Complemental strand, 54268970 - 54268752
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaa 555  Q
    |||||||||||| |||| |||||||||||||||||||||| | |||||| | ||||| |||||| ||||| ||           ||||||||||||||||    
T  54268970 ttatatttaatttatttcatgttaaaaaattctaaattttaggaaatgatc-ttttgaaatgttctaaacata--------aaatcgttcaaaaatttaa 54268880  T
Q  556 gagtttaaggataattagagaaactttgttttaataggaactaaaacttcatataaatcatttttataggaactnnnnnnngctattaaaattaagtaaa 655  Q
     |||||||||||||||| | |||||||||||||  ||| ||||||| | ||| |||||  ||||| |||| | |       |||||||||||||||||||    
T  54268879 aagtttaaggataattaaacaaactttgttttagcagggactaaaattacatgtaaatattttttgtaggga-ttaaaaaagctattaaaattaagtaaa 54268781  T
Q  656 gattaaacttagaagtttcaaattttata 684  Q
     | |||||||| || |||  |||||||||    
T  54268780 aactaaacttataaattttcaattttata 54268752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 0.000000000000001
Query Start/End: Original strand, 459 - 527
Target Start/End: Original strand, 31991240 - 31991308
Alignment:
Q  459 tatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    ||||||||| |||| |||||||||||||||||||||| |||||  |||||||||||||||| |||||||    
T  31991240 tatttaatttatttcatgttaaaaaattctaaattttagtaaacaaaccttttgtaatgttctaaactt 31991308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 43767339 - 43767255
Alignment:
Q  18 ttaatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacattt 102  Q
    |||||||||| ||| ||||| || ||||| ||| |||  ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  43767339 ttaatgtgttgaatgcacaaatttcaagacaaaattttcattttaaacctcttatcaattgccctaagggcacttgttaacattt 43767255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 15496204 - 15496287
Alignment:
Q  24 tgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacattttcctt 107  Q
    |||| ||||||||| | ||||||||||||| ||| ||||||  |||||||||| ||| |||| |||||||||||||||||||||    
T  15496204 tgttgaatacacaaatcccaagataaagttcctactttaaatttcttatcaagggccataagggcacttgttaacattttcctt 15496287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 0.000000000000005
Query Start/End: Original strand, 106 - 184
Target Start/End: Original strand, 52701171 - 52701250
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatct 184  Q
    ||||||||||||||||||| ||||||||||||||||||||||  | |  |||||||||| ||||||| ||||||||||||    
T  52701171 tttgtttaattatgcttaaacttttaagattttgaacaattttttacacaagtgttaagaacattacgaaaagttcatct 52701250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 568
Target Start/End: Original strand, 8575373 - 8575460
Alignment:
Q  481 aaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaagagtttaaggata 568  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||||| | ||       ||||| |||||||||||||||||||||||    
T  8575373 aaaattctaaattttagtaaacgaaccttttgtaatgttctaaacttgtatcaaaaaattcgttaaaaaatttaagagtttaaggata 8575460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 458 - 561
Target Start/End: Original strand, 32147168 - 32147271
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| |||| ||||| |||  || |||| ||||||| ||||       ||||||||||||||||||    
T  32147168 atatttaattcgtttcatgttaaaaaattctaaattttagtaattgaacatttcatagtgttctaaacttgtctccaaaaaatcgttcaaaaatttaaga 32147267  T
Q  558 gttt 561  Q
    ||||    
T  32147268 gttt 32147271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 572
Target Start/End: Original strand, 46295225 - 46295339
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    |||||||||| |||| ||||||||||||| || ||||| ||||||||||||||  || |||| ||||||| | |        ||||| ||||||||||||    
T  46295225 atatttaatttatttaatgttaaaaaattatagattttagtaaatgaacctttcatagtgttctaaacttgtataaaaagaatcgttaaaaaatttaaga 46295324  T
Q  558 gtttaaggataatta 572  Q
    |||||||||||||||    
T  46295325 gtttaaggataatta 46295339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 527
Target Start/End: Original strand, 52701333 - 52701402
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||| |||| ||| |||| ||||||||||||| ||||| ||||||||||||||||| |||||||    
T  52701333 atatttaatttatttcatgctaaataattctaaattttagtaaacgaaccttttgtaatgttctaaactt 52701402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 458 - 509
Target Start/End: Complemental strand, 44287890 - 44287839
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaacctt 509  Q
    ||||||||||||||| |||||||||||||||||||||| | |||||||||||    
T  44287890 atatttaattcatttcatgttaaaaaattctaaattttagcaaatgaacctt 44287839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 458 - 527
Target Start/End: Original strand, 25232828 - 25232898
Alignment:
Q  458 atatttaattcattttatgttaaaaaatt-ctaaattttggtaaatgaaccttttgtaatgttttaaactt 527  Q
    |||||||||| |||| ||||||||||||| ||||||||| ||||| ||||||||| ||||||| |||||||    
T  25232828 atatttaatttatttcatgttaaaaaatttctaaattttagtaaacgaaccttttctaatgttctaaactt 25232898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.000000000004
Query Start/End: Original strand, 106 - 182
Target Start/End: Complemental strand, 41928123 - 41928045
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgtt-aagcacattactaaaagttcat 182  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||  ||||||| ||| ||||||| ||||||||||    
T  41928123 tttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtgttaaagaacattacgaaaagttcat 41928045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 540 - 601
Target Start/End: Original strand, 23917574 - 23917635
Alignment:
Q  540 tcgttcaaaaatttaagagtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||| |||||||||||||||||||||||||||| | |||||||||| ||| ||| |||||||    
T  23917574 tcgtacaaaaatttaagagtttaaggataattaaacaaactttgttgtaacagggactaaaa 23917635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 572
Target Start/End: Complemental strand, 39562672 - 39562558
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    |||||||||| |||| ||||||||||||| || ||||| ||||||||||||||  || |||| ||||||| | |        | ||| ||||||||||||    
T  39562672 atatttaatttatttcatgttaaaaaattatagattttagtaaatgaacctttcatagtgttctaaacttgtataaaaagaattgttaaaaaatttaaga 39562573  T
Q  558 gtttaaggataatta 572  Q
    |||||||||||||||    
T  39562572 gtttaaggataatta 39562558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000007
Query Start/End: Original strand, 458 - 510
Target Start/End: Original strand, 9018192 - 9018244
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttt 510  Q
    ||||| |||| |||| |||||||||||||||||||||| ||||||||||||||    
T  9018192 atattgaatttatttcatgttaaaaaattctaaatttttgtaaatgaaccttt 9018244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000007
Query Start/End: Original strand, 370 - 426
Target Start/End: Original strand, 12790113 - 12790169
Alignment:
Q  370 ttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtg 426  Q
    ||||||| ||||| |||||||||||||||||| |||||||||||| ||||| |||||    
T  12790113 ttatcttttcaatacaatatttattatttaatcctattttaagatatttatattgtg 12790169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000007
Query Start/End: Original strand, 384 - 428
Target Start/End: Complemental strand, 52247467 - 52247423
Alignment:
Q  384 caatatttattatttaattctattttaagatctttatcttgtgcc 428  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||    
T  52247467 caatatttattgtttaattctattttaaaatctttatcttgtgcc 52247423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 9596329 - 9596270
Alignment:
Q  43 aagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacattt 102  Q
    |||||||| ||||| |||||| | ||||| |||||||||||||||||||||||| |||||    
T  9596329 aagataaactttcttttttaagcttcttaacaagtgccctaagagcacttgttagcattt 9596270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 672
Target Start/End: Original strand, 11294143 - 11294177
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtt 672  Q
    |||||||||||||||||||||||||||||||||||    
T  11294143 ctattaaaattaagtaaagattaaacttagaagtt 11294177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 179
Target Start/End: Original strand, 31991077 - 31991151
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagtt 179  Q
    |||||||||||||| |||| ||||||||||||||||||||||  |||  |||||||||  ||||||| |||||||    
T  31991077 tttgtttaattatgtttaaacttttaagattttgaacaattttttgcacaagtgttaaaaacattacgaaaagtt 31991151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 102
Target Start/End: Complemental strand, 54457522 - 54457440
Alignment:
Q  20 aatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacattt 102  Q
    |||||||| |||||| || ||  |||||||| ||| |||||||| | |||||| |||||| |||||||||||||||| |||||    
T  54457522 aatgtgttgaatacataaattttaagataaattttttattttaatcttcttattaagtgctctaagagcacttgttagcattt 54457440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 461 - 510
Target Start/End: Original strand, 21749741 - 21749790
Alignment:
Q  461 tttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttt 510  Q
    |||||||| ||| || ||||||||||||||||||| ||||||||||||||    
T  21749741 tttaattcgtttcatattaaaaaattctaaattttagtaaatgaaccttt 21749790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 33476474 - 33476433
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaattt 146  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  33476474 tttgtttaattatgcttaaacttttaagattttgaacaattt 33476433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 370 - 431
Target Start/End: Complemental strand, 34819792 - 34819731
Alignment:
Q  370 ttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtgccttt 431  Q
    ||||||| ||||| |||| |||||| |||||||||||||||||||  |||||||||| ||||    
T  34819792 ttatcttttcaatacaatttttattgtttaattctattttaagattcttatcttgtgtcttt 34819731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 8576188 - 8576124
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacatt 169  Q
    |||||||||||||| |||| ||||||||||||||||||||||  |||  |||||||||| |||||    
T  8576188 tttgtttaattatgtttaaacttttaagattttgaacaattttttgcacaagtgttaagaacatt 8576124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 510
Target Start/End: Original strand, 19601721 - 19601773
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttt 510  Q
    |||||||||| ||||  ||||||||||||||||||||| | ||||||||||||    
T  19601721 atatttaattaatttcgtgttaaaaaattctaaattttagcaaatgaaccttt 19601773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 458 - 510
Target Start/End: Original strand, 53377438 - 53377490
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttt 510  Q
    ||||||||||| ||  |||||| ||||||||||||||| ||||||||||||||    
T  53377438 atatttaattcgttccatgttagaaaattctaaattttagtaaatgaaccttt 53377490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 184
Target Start/End: Complemental strand, 53518069 - 53517989
Alignment:
Q  106 tttgtttaatt-atgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatct 184  Q
    ||||||||||| |||||||| ||||| || |||||||||||||   || || |||||||| ||||||||||||||||||||    
T  53518069 tttgtttaatttatgcttaaacttttgagtttttgaacaatttttcgcagacgtgttaagaacattactaaaagttcatct 53517989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000007
Query Start/End: Original strand, 637 - 684
Target Start/End: Original strand, 19601901 - 19601948
Alignment:
Q  637 gctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||||||| |||||| |||||||||||||||| |||| |||||||||    
T  19601901 gctattaaatttaagtgaagattaaacttagaaatttccaattttata 19601948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000007
Query Start/End: Original strand, 106 - 144
Target Start/End: Complemental strand, 31991964 - 31991925
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaat 144  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  31991964 tttgtttaattatgcttaaacttttaagattttgaacaat 31991925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000007
Query Start/End: Original strand, 385 - 432
Target Start/End: Complemental strand, 47068812 - 47068765
Alignment:
Q  385 aatatttattatttaattctattttaagatctttatcttgtgccttta 432  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||| ||||    
T  47068812 aatatttattatttatttctattctaagatccttatcttgtgcgttta 47068765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 637 - 683
Target Start/End: Complemental strand, 15771848 - 15771802
Alignment:
Q  637 gctattaaaattaagtaaagattaaacttagaagtttcaaattttat 683  Q
    |||||||||||||||||| || |||||||| ||||||| ||||||||    
T  15771848 gctattaaaattaagtaaggactaaacttaaaagtttccaattttat 15771802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 384 - 443
Target Start/End: Complemental strand, 21758310 - 21758250
Alignment:
Q  384 caatatttattatttaattctattttaagatctttatcttgtgccttt--aagttaacattt 443  Q
    |||||||||||||| ||||||||||||||||  |||||||||||| ||  ||||||||||||    
T  21758310 caatatttattatt-aattctattttaagattcttatcttgtgcccttacaagttaacattt 21758250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 25232687 - 25232745
Alignment:
Q  126 ttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatct 184  Q
    |||||||||||||||||||||  |||  |||||||||| ||||||| |||| |||||||    
T  25232687 ttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaatttcatct 25232745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 370 - 432
Target Start/End: Original strand, 28958627 - 28958689
Alignment:
Q  370 ttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtgccttta 432  Q
    ||||||| ||||| ||||| ||||| |||| |||| |||||||||| ||||||||||| ||||    
T  28958627 ttatcttttcaatacaataattattgtttacttctgttttaagatccttatcttgtgctttta 28958689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 102
Target Start/End: Original strand, 29577343 - 29577417
Alignment:
Q  28 aaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacattt 102  Q
    |||||||||| || |||||||||||||||| ||| ||  ||||| | |||| | | |||||||||||||||||||    
T  29577343 aaatacacaattttcaagataaagtttctacttttaatttcttaactagtgtcttgagagcacttgttaacattt 29577417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 369 - 415
Target Start/End: Original strand, 33641001 - 33641047
Alignment:
Q  369 cttatcttgtcaatgcaatatttattatttaattctattttaagatc 415  Q
    ||||| || ||||| ||||||||||| ||||||||||||||||||||    
T  33641001 cttatattttcaatacaatatttattgtttaattctattttaagatc 33641047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 384 - 430
Target Start/End: Complemental strand, 33967981 - 33967935
Alignment:
Q  384 caatatttattatttaattctattttaagatctttatcttgtgcctt 430  Q
    ||||||||||| |||| ||||||| ||||||| ||||||||||||||    
T  33967981 caatatttattgtttatttctattataagatccttatcttgtgcctt 33967935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 524
Target Start/End: Complemental strand, 41927962 - 41927896
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaa 524  Q
    |||||||||| |||| || ||||||| ||||||||||| ||||| || || ||||||||||| ||||    
T  41927962 atatttaatttatttcatattaaaaagttctaaattttagtaaacgagccatttgtaatgttctaaa 41927896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 684
Target Start/End: Original strand, 53377617 - 53377663
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||||||||||||||| || |||||||||||||| | |||||||||    
T  53377617 ctattaaaattaagtaaggactaaacttagaagttcctaattttata 53377663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 532
Target Start/End: Original strand, 53439483 - 53439556
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctc 532  Q
    ||||||||||| ||| |||||||||||||||||| ||| |||| |||||||||  || |||| ||||||| ||||    
T  53439483 atatttaattcgtttcatgttaaaaaattctaaa-tttagtaattgaacctttcatagtgttctaaacttttctc 53439556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 64; Significance: 5e-27; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 64; E-Value: 5e-27
Query Start/End: Original strand, 460 - 588
Target Start/End: Complemental strand, 21871 - 21743
Alignment:
Q  460 atttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaagagt 559  Q
    ||||||||| ||| |||||| ||||||||||||||| ||||||||||||||| || |||| ||||||| ||||       |||||||||||||||| |||    
T  21871 atttaattcgtttcatgttagaaaattctaaattttagtaaatgaaccttttatagtgttctaaacttgtctcgaaaaaatcgttcaaaaatttaaaagt 21772  T
Q  560 ttaaggataattagagaaactttgtttta 588  Q
    ||||||||||||| | |||||||||||||    
T  21771 ttaaggataattaaacaaactttgtttta 21743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 63; Significance: 2e-26; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 63; E-Value: 2e-26
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 6040 - 5897
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||||||||||  || ||||  |||||| ||||       ||||||||||| | ||||    
T  6040 atatttaattcgtttgatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttccaaacttgtctcaaaaaaatcgttcaaaaaatcaaga 5941  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | |||||||||| ||||||| |||||||    
T  5940 gtttaaggataattaaacaaactttgttgtaatagggactaaaa 5897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 63; Significance: 2e-26; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 63; E-Value: 2e-26
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 25180 - 25037
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||||||||||||||||  ||| |||||||||  || |||| ||||||| ||||       ||||||||||||||||||    
T  25180 atatttaattcgtttcatgttaaaaaattctaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaaaattcgttcaaaaatttaaga 25081  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||| |||||||| | ||||||||||||| |||| |||||||    
T  25080 gtttaacgataattaaacaaactttgttttagtagggactaaaa 25037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 37; E-Value: 0.00000000007
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 23958 - 24094
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||||||| |  ||||||||||||||||||| |||| |||||| |       ||| ||||||| ||||       ||||||||||||||||||    
T  23958 atatttaattcatttcaaattaaaaaattctaaattttagtaattgaaccgt-------gttctaaacttgtctcaaaaaaatcgttcaaaaatttaaga 24050  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||  ||||||| | |||||||||||||  ||| |||||||    
T  24051 gtttaaaaataattaaacaaactttgttttagaagggactaaaa 24094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 59; Significance: 5e-24; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 59; E-Value: 5e-24
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 240135 - 239992
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||||||||||||||||||||||  ||| |||||||||  || |||| ||||||| ||||       |||||||||||||||| |    
T  240135 atatttaattcgtttcatgttaaaaaattctaaattttattaattgaacctttcatagtgttctaaacttgtctcaaaaaagtcgttcaaaaatttaaca 240036  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||| ||||||||||| | ||||||||||||| |||| |||||||    
T  240035 gttgaaggataattaaacaaactttgttttagtagggactaaaa 239992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1190 (Bit Score: 58; Significance: 2e-23; HSPs: 2)
Name: scaffold1190
Description:

Target: scaffold1190; HSP #1
Raw Score: 58; E-Value: 2e-23
Query Start/End: Original strand, 456 - 585
Target Start/End: Complemental strand, 328 - 198
Alignment:
Q  456 ttatatttaattcatttt-atgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaattta 554  Q
    ||||||||||||  |||| || ||||||||||||||||||| |||||||||||||| ||| |||| | ||||| ||||       |||||||||||||||    
T  328 ttatatttaattttttttcattttaaaaaattctaaattttagtaaatgaacctttcgtagtgttctgaacttgtctcgaaaaaatcgttcaaaaattta 229  T
Q  555 agagtttaaggataattagagaaactttgtt 585  Q
    |||||||||||||||||| | ||||||||||    
T  228 agagtttaaggataattaaacaaactttgtt 198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1190; HSP #2
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 684
Target Start/End: Complemental strand, 146 - 100
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||||||||||||||| || |||||||||||||| | |||||||||    
T  146 ctattaaaattaagtaaggactaaacttagaagttcccaattttata 100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 57; Significance: 8e-23; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 57; E-Value: 8e-23
Query Start/End: Original strand, 456 - 601
Target Start/End: Original strand, 35443 - 35588
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaa 555  Q
    ||||||||||||| ||| |||||||||||||||||||||| |||| |||||||||  ||||  | ||||||| | ||       ||||||||||||||||    
T  35443 ttatatttaattcgtttcatgttaaaaaattctaaattttagtaattgaacctttcataataatctaaacttgtttcaaaaaaatcgttcaaaaatttaa 35542  T
Q  556 gagtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    || |||||||||||||| | |||||||||||||  ||| |||||||    
T  35543 gactttaaggataattaaacaaactttgttttagcagggactaaaa 35588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 55; Significance: 1e-21; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 55; E-Value: 1e-21
Query Start/End: Original strand, 458 - 585
Target Start/End: Complemental strand, 4094 - 3967
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||  ||| |||||||||||||||||||||| ||||||||||||||  || |||| ||||||| ||||       |||||||||||| |||||    
T  4094 atatttaatttgtttcatgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcaaaaatgtaaga 3995  T
Q  558 gtttaaggataattagagaaactttgtt 585  Q
    ||||||||||||||| | ||| ||||||    
T  3994 gtttaaggataattaaacaaattttgtt 3967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1191 (Bit Score: 52; Significance: 8e-20; HSPs: 1)
Name: scaffold1191
Description:

Target: scaffold1191; HSP #1
Raw Score: 52; E-Value: 8e-20
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 840 - 984
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatct-cnnnnnnntcgttcaaaaatttaag 556  Q
    ||||||||||| ||| || ||||||||||||||||||| ||||||||||||||| || |||| |||||||||||         |||||||||||||||||    
T  840 atatttaattcgtttcatcttaaaaaattctaaattttagtaaatgaaccttttatagtgttctaaacttatctaaaaaaaaatcgttcaaaaatttaag 939  T
Q  557 agtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    |||||||| ||||| | | ||||||| || ||| ||| |||||||    
T  940 agtttaagaataatcaaacaaacttttttgtaagagggactaaaa 984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0651 (Bit Score: 51; Significance: 3e-19; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 458 - 588
Target Start/End: Complemental strand, 6986 - 6855
Alignment:
Q  458 atatttaattcattttatgttaaaaaa-ttctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaag 556  Q
    ||||||||||  ||| ||||||||||| ||||||||||| |||| |||||||||  || |||| ||||||| ||||       ||||||| |||||||||    
T  6986 atatttaatttgtttcatgttaaaaaaattctaaattttagtaattgaacctttcatagtgttctaaacttgtctcaaaaaaatcgttcagaaatttaag 6887  T
Q  557 agtttaaggataattagagaaactttgtttta 588  Q
    |||||||||||||||| | |||||||||||||    
T  6886 agtttaaggataattaaacaaactttgtttta 6855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 51; Significance: 3e-19; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 51; E-Value: 3e-19
Query Start/End: Original strand, 458 - 588
Target Start/End: Original strand, 52521 - 52652
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatc-tcnnnnnnntcgttcaaaaatttaag 556  Q
    ||||||||||||||| | ||||||||| |||||||||| ||||||||||||||| ||||||| |||||||||| |         ||||| |||||||| |    
T  52521 atatttaattcatttcaagttaaaaaaatctaaattttagtaaatgaaccttttataatgttctaaacttatcttagaaaaaaccgttccaaaatttacg 52620  T
Q  557 agtttaaggataattagagaaactttgtttta 588  Q
    ||| |||||||||||| | |||||||||||||    
T  52621 agtctaaggataattaaacaaactttgtttta 52652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 50; Significance: 1e-18; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 50; E-Value: 1e-18
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 282943 - 283024
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatctgc 186  Q
    ||||||||||||||||||| ||||||||||||||||||||||  |||  |||||||||| ||||||| ||||||||||||||    
T  282943 tttgtttaattatgcttaaacttttaagattttgaacaattttttgcacaagtgttaagaacattacgaaaagttcatctgc 283024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 40; E-Value: 0.000000000001
Query Start/End: Original strand, 458 - 517
Target Start/End: Complemental strand, 283360 - 283301
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatg 517  Q
    |||||||||| |||| |||||||||||||||||||||| ||||| |||||||| ||||||    
T  283360 atatttaatttatttcatgttaaaaaattctaaattttagtaaacgaacctttagtaatg 283301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 34; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 283522 - 283481
Alignment:
Q  106 tttgtttaattatgcttaa-cttttaagattttgaacaattt 146  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  283522 tttgtttaattatgcttaaacttttaagattttgaacaattt 283481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 50; Significance: 1e-18; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 50; E-Value: 1e-18
Query Start/End: Original strand, 458 - 585
Target Start/End: Complemental strand, 158150 - 158024
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| ||| |||||||||||||||||| ||||||||||||||  || |||| ||||||| ||||       ||||||||||||| ||||    
T  158150 atatttaattcgtttcatggtaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgtctc-aaaaaatcgttcaaaaattgaaga 158052  T
Q  558 gtttaaggataattagagaaactttgtt 585  Q
    ||||||||| ||||| | ||||||||||    
T  158051 gtttaaggagaattaaacaaactttgtt 158024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571 (Bit Score: 48; Significance: 2e-17; HSPs: 2)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 48; E-Value: 2e-17
Query Start/End: Original strand, 458 - 601
Target Start/End: Original strand, 8624 - 8768
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaacctttt-gtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaag 556  Q
    ||||||||||| ||| || ||||||||||||||||||| |||||||||||||||  || |||| ||| |||||||        |||||||||||||||||    
T  8624 atatttaattcgtttcatcttaaaaaattctaaattttagtaaatgaaccttttcatagtgttctaaccttatctaaaaaaaatcgttcaaaaatttaag 8723  T
Q  557 agtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    | |||||| ||||| | | |||||||||| ||| ||| |||||||    
T  8724 aatttaagaataatcaaacaaactttgttgtaagagggactaaaa 8768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571; HSP #2
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 684
Target Start/End: Original strand, 8802 - 8848
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||||||||||||||| ||||||||||| ||||||  |||||||||    
T  8802 ctattaaaattaagtaaggattaaacttaaaagttttcaattttata 8848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 47; Significance: 7e-17; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 47; E-Value: 7e-17
Query Start/End: Original strand, 458 - 601
Target Start/End: Complemental strand, 17499 - 17357
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||| ||| |||||||||| ||||||||||| ||||||||| || |  |  |||| ||||||| ||||       || |||||||||||||||    
T  17499 atatttaattcgtttcatgttaaaaa-ttctaaattttagtaaatgaatctatcatggtgttctaaacttgtctcaaaaaaatctttcaaaaatttaaga 17401  T
Q  558 gtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||| | ||||||| ||||| |||| |||||||    
T  17400 gtttaaggataattaaacaaactttattttagtagggactaaaa 17357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 43; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 43; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 29756 - 29838
Alignment:
Q  20 aatgtgttaaatacacaagttccaagataaagtttctattttaaacctcttatcaagtgccctaagagcacttgttaacattt 102  Q
    |||||||| ||||||| | |||||||||||| |||||| ||| ||| | ||||||||||||||||| |||||| |||||||||    
T  29756 aatgtgttgaatacacgaattccaagataaaatttctactttcaactttttatcaagtgccctaagggcacttattaacattt 29838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0640 (Bit Score: 42; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 572
Target Start/End: Complemental strand, 4015 - 3901
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    |||||||||| |||| ||||||||||||| || ||||| ||||||||||||||  || |||| ||||||| | |        ||||| ||||||||||||    
T  4015 atatttaatttatttcatgttaaaaaattatagattttagtaaatgaacctttcatagtgttctaaacttgtataaaaagaatcgttaaaaaatttaaga 3916  T
Q  558 gtttaaggataatta 572  Q
    |||||||||||||||    
T  3915 gtttaaggataatta 3901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 42; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 42; E-Value: 0.00000000000007
Query Start/End: Original strand, 458 - 588
Target Start/End: Original strand, 7104 - 7234
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaaga 557  Q
    ||||||||||  |||  ||||| ||||||||||||||| |||||||||| |||  || |||| ||||||| ||||       || || ||||||||||||    
T  7104 atatttaatttgtttcgtgttagaaaattctaaattttagtaaatgaacttttcatattgttctaaacttgtctcaaaaaaatcattaaaaaatttaaga 7203  T
Q  558 gtttaaggataattagagaaactttgtttta 588  Q
    |||||| |||||||| | |||||||||||||    
T  7204 gtttaatgataattaaacaaactttgtttta 7234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514 (Bit Score: 36; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 474 - 558
Target Start/End: Complemental strand, 6281 - 6197
Alignment:
Q  474 atgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaagag 558  Q
    |||||||||||||||||||||| ||||||||||||||  || |||| |||||||  |||       |||||||||||||||||||    
T  6281 atgttaaaaaattctaaattttagtaaatgaacctttcatagtgttctaaacttgcctcgaaaaaatcgttcaaaaatttaagag 6197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0514; HSP #2
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 638 - 684
Target Start/End: Complemental strand, 6125 - 6079
Alignment:
Q  638 ctattaaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    ||||||||||||||||| || |||||||||||||| | |||||||||    
T  6125 ctattaaaattaagtaaggactaaacttagaagttcccaattttata 6079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 36; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 546 - 601
Target Start/End: Complemental strand, 9995 - 9940
Alignment:
Q  546 aaaaatttaagagtttaaggataattagagaaactttgttttaataggaactaaaa 601  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| |||| |||||||    
T  9995 aaaaatttaagagtttaagaataattaaacaaactttgttttagtagggactaaaa 9940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 36; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 369 - 428
Target Start/End: Original strand, 37460 - 37519
Alignment:
Q  369 cttatcttgtcaatgcaatatttattatttaattctattttaagatctttatcttgtgcc 428  Q
    ||||| || ||||||||||||||||| |||||||||||||||| ||  ||||||||||||    
T  37460 cttatattttcaatgcaatatttattttttaattctattttaatattcttatcttgtgcc 37519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 36; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 36; E-Value: 0.0000000003
Query Start/End: Original strand, 456 - 568
Target Start/End: Complemental strand, 123310 - 123198
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctcnnnnnnntcgttcaaaaatttaa 555  Q
    ||||||||||||||| | | ||||||||||| |||||||| ||||||| | ||||| || |||||||||  | ||||       ||||| |||| |||||    
T  123310 ttatatttaattcatctcaagttaaaaaattttaaattttagtaaatgcagcttttatattgttttaaatgtgtctcggaaaaatcgttaaaaattttaa 123211  T
Q  556 gagtttaaggata 568  Q
    |||||||||||||    
T  123210 gagtttaaggata 123198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.00000007; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.00000007
Query Start/End: Original strand, 456 - 495
Target Start/End: Complemental strand, 235527 - 235488
Alignment:
Q  456 ttatatttaattcattttatgttaaaaaattctaaatttt 495  Q
    |||||||||||||||| |||||||||||||||||| ||||    
T  235527 ttatatttaattcattatatgttaaaaaattctaattttt 235488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 31; Significance: 0.0000003; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 642 - 684
Target Start/End: Complemental strand, 697 - 655
Alignment:
Q  642 taaaattaagtaaagattaaacttagaagtttcaaattttata 684  Q
    |||||||||||||||| |||||||||||||||  |||||||||    
T  697 taaaattaagtaaagactaaacttagaagtttacaattttata 655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707 (Bit Score: 31; Significance: 0.0000003; HSPs: 2)
Name: scaffold0707
Description:

Target: scaffold0707; HSP #1
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 532
Target Start/End: Complemental strand, 7023 - 6950
Alignment:
Q  458 atatttaattcattttatgttaaaaaattctaaattttggtaaatgaaccttttgtaatgttttaaacttatctc 532  Q
    ||||||||||||||||| ||| |||||||||||||||| || ||| |||||||  || |||| ||||||| ||||    
T  7023 atatttaattcattttaggtt-aaaaattctaaattttagttaataaacctttcatagtgttctaaacttgtctc 6950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0707; HSP #2
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 7185 - 7103
Alignment:
Q  106 tttgtttaat-tatgctta-acttttaagattttgaacaatttcctgcggaagtgttaagcacattactaaaagttcatctgc 186  Q
    |||||||||| |||||||| ||| || || |||||||||||||  ||| || |||||||  ||||||||||||||||||||||    
T  7185 tttgtttaatgtatgcttatactcttgagtttttgaacaattttttgcagacgtgttaaaaacattactaaaagttcatctgc 7103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 31; Significance: 0.0000003; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 31; E-Value: 0.0000003
Query Start/End: Original strand, 385 - 423
Target Start/End: Complemental strand, 26111 - 26073
Alignment:
Q  385 aatatttattatttaattctattttaagatctttatctt 423  Q
    ||||||||| ||||||||||||||||| |||||||||||    
T  26111 aatatttatcatttaattctattttaatatctttatctt 26073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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