View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3459_low_1 (Length: 802)

Name: NF3459_low_1
Description: NF3459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3459_low_1
NF3459_low_1
[»] chr4 (80 HSPs)
chr4 (18-795)||(37188686-37189468)
chr4 (692-795)||(37180386-37180489)
chr4 (18-181)||(10389846-10390012)
chr4 (18-168)||(34024529-34024680)
chr4 (18-181)||(43444223-43444390)
chr4 (18-181)||(867987-868159)
chr4 (18-173)||(38706802-38706959)
chr4 (18-181)||(1531736-1531905)
chr4 (18-152)||(51317846-51317982)
chr4 (18-124)||(10359639-10359746)
chr4 (18-181)||(9645641-9645808)
chr4 (18-124)||(50766601-50766709)
chr4 (18-124)||(56194488-56194598)
chr4 (18-181)||(25273705-25273880)
chr4 (18-124)||(9528969-9529078)
chr4 (18-124)||(31381764-31381871)
chr4 (18-91)||(8009453-8009526)
chr4 (18-165)||(21090000-21090149)
chr4 (18-122)||(53616742-53616849)
chr4 (18-123)||(47416774-47416881)
chr4 (18-163)||(35965067-35965214)
chr4 (30-124)||(20569141-20569235)
chr4 (30-124)||(43154127-43154220)
chr4 (18-124)||(2115679-2115788)
chr4 (30-124)||(9283800-9283894)
chr4 (18-181)||(2624327-2624495)
chr4 (18-177)||(4643690-4643855)
chr4 (49-123)||(5333584-5333658)
chr4 (692-790)||(37181259-37181355)
chr4 (18-91)||(32952840-32952913)
chr4 (18-124)||(6972698-6972807)
chr4 (19-169)||(35261032-35261187)
chr4 (30-123)||(1008185-1008278)
chr4 (31-123)||(12265345-12265438)
chr4 (38-123)||(27593952-27594036)
chr4 (49-124)||(5333656-5333730)
chr4 (566-630)||(38704602-38704666)
chr4 (18-123)||(18139005-18139112)
chr4 (18-123)||(49126218-49126325)
chr4 (77-127)||(41255532-41255582)
chr4 (18-106)||(21554901-21554990)
chr4 (18-82)||(29965565-29965632)
chr4 (378-435)||(35308961-35309018)
chr4 (96-165)||(44947251-44947320)
chr4 (30-91)||(49680459-49680520)
chr4 (18-87)||(14183729-14183800)
chr4 (363-431)||(44516203-44516271)
chr4 (25-73)||(52978747-52978795)
chr4 (374-481)||(2396344-2396450)
chr4 (77-124)||(3338816-3338863)
chr4 (74-168)||(1931853-1931947)
chr4 (19-72)||(3336250-3336304)
chr4 (27-89)||(23329094-23329156)
chr4 (374-432)||(35331956-35332014)
chr4 (26-71)||(9713832-9713877)
chr4 (392-433)||(29857109-29857150)
chr4 (363-423)||(32139926-32139986)
chr4 (30-123)||(46991236-46991329)
chr4 (86-165)||(50179619-50179698)
chr4 (393-460)||(53096599-53096666)
chr4 (26-129)||(54021725-54021831)
chr4 (377-435)||(822355-822413)
chr4 (377-423)||(11253954-11254000)
chr4 (18-103)||(21365187-21365275)
chr4 (374-432)||(45833942-45833999)
chr4 (43-89)||(49072876-49072922)
chr4 (22-63)||(3821881-3821922)
chr4 (26-71)||(5119264-5119309)
chr4 (374-431)||(10180586-10180643)
chr4 (26-71)||(13634040-13634085)
chr4 (26-71)||(22038940-22038985)
chr4 (26-71)||(22558603-22558648)
chr4 (26-71)||(26633810-26633855)
chr4 (18-71)||(27651872-27651925)
chr4 (26-71)||(29961064-29961109)
chr4 (26-63)||(33920984-33921021)
chr4 (378-435)||(39055252-39055309)
chr4 (374-435)||(42426863-42426924)
chr4 (30-71)||(43095555-43095596)
chr4 (26-71)||(47158152-47158197)
[»] chr6 (39 HSPs)
chr6 (18-187)||(17237377-17237549)
chr6 (18-181)||(23947410-23947576)
chr6 (18-181)||(33109652-33109818)
chr6 (18-181)||(25064053-25064221)
chr6 (30-177)||(12652762-12652911)
chr6 (30-165)||(8496801-8496936)
chr6 (40-165)||(4984694-4984818)
chr6 (18-124)||(33740670-33740778)
chr6 (18-123)||(4468437-4468543)
chr6 (30-124)||(7876151-7876245)
chr6 (18-124)||(8196499-8196607)
chr6 (18-124)||(10228556-10228664)
chr6 (30-124)||(4088336-4088431)
chr6 (23-165)||(12165677-12165820)
chr6 (18-124)||(16419035-16419143)
chr6 (18-168)||(33543712-33543864)
chr6 (30-124)||(7881209-7881303)
chr6 (37-124)||(17334652-17334739)
chr6 (18-123)||(8028210-8028317)
chr6 (26-71)||(1933837-1933882)
chr6 (374-435)||(7693895-7693956)
chr6 (374-460)||(3543265-3543351)
chr6 (363-433)||(3705681-3705751)
chr6 (345-431)||(24072489-24072575)
chr6 (31-116)||(25398451-25398536)
chr6 (37-84)||(9508829-9508876)
chr6 (18-116)||(34489133-34489235)
chr6 (384-449)||(1946957-1947022)
chr6 (37-91)||(5582765-5582819)
chr6 (49-91)||(8266545-8266587)
chr6 (37-83)||(13436705-13436751)
chr6 (18-85)||(35001506-35001575)
chr6 (377-414)||(1624193-1624230)
chr6 (26-71)||(3913713-3913758)
chr6 (30-106)||(4352106-4352183)
chr6 (26-71)||(11321608-11321653)
chr6 (30-71)||(14801112-14801153)
chr6 (18-72)||(25337499-25337555)
chr6 (26-71)||(34018466-34018511)
[»] chr1 (66 HSPs)
chr1 (18-181)||(14545342-14545508)
chr1 (18-181)||(30818438-30818603)
chr1 (18-124)||(28035020-28035128)
chr1 (18-165)||(51871705-51871852)
chr1 (31-181)||(18569417-18569567)
chr1 (18-124)||(20266183-20266291)
chr1 (18-124)||(50272232-50272340)
chr1 (18-124)||(51868737-51868845)
chr1 (18-123)||(25406376-25406483)
chr1 (18-181)||(40646510-40646678)
chr1 (30-124)||(25728065-25728159)
chr1 (20-124)||(27872620-27872725)
chr1 (30-123)||(35584727-35584820)
chr1 (30-179)||(50148196-50148347)
chr1 (30-182)||(5701078-5701232)
chr1 (18-177)||(33291510-33291674)
chr1 (23-124)||(9172369-9172472)
chr1 (23-124)||(9180351-9180454)
chr1 (18-124)||(38520626-38520733)
chr1 (18-123)||(5324650-5324756)
chr1 (30-124)||(19716003-19716096)
chr1 (30-124)||(40881119-40881213)
chr1 (37-124)||(30878956-30879043)
chr1 (30-124)||(7997668-7997762)
chr1 (18-124)||(3871289-3871397)
chr1 (37-168)||(45426175-45426307)
chr1 (18-182)||(7342543-7342711)
chr1 (18-168)||(19723171-19723322)
chr1 (18-168)||(39987222-39987378)
chr1 (37-124)||(45805922-45806009)
chr1 (18-124)||(50166191-50166299)
chr1 (18-91)||(9919303-9919378)
chr1 (18-118)||(11453822-11453924)
chr1 (18-84)||(34519054-34519121)
chr1 (18-124)||(44637303-44637410)
chr1 (18-124)||(7312191-7312298)
chr1 (18-124)||(19052426-19052532)
chr1 (19-104)||(18649977-18650062)
chr1 (26-109)||(15492160-15492243)
chr1 (30-119)||(41081809-41081899)
chr1 (26-71)||(1742188-1742233)
chr1 (377-458)||(14775141-14775222)
chr1 (26-71)||(23291782-23291827)
chr1 (26-101)||(31918864-31918942)
chr1 (334-435)||(35988308-35988411)
chr1 (60-124)||(48365887-48365951)
chr1 (26-69)||(12635076-12635119)
chr1 (387-422)||(12981132-12981167)
chr1 (43-102)||(15397306-15397365)
chr1 (376-435)||(27544462-27544521)
chr1 (392-435)||(46487067-46487110)
chr1 (363-409)||(10472389-10472435)
chr1 (378-428)||(25813833-25813883)
chr1 (374-432)||(32451731-32451789)
chr1 (374-428)||(44850032-44850086)
chr1 (26-71)||(21947757-21947802)
chr1 (391-432)||(23333853-23333894)
chr1 (26-71)||(29738775-29738820)
chr1 (374-411)||(35839858-35839895)
chr1 (363-408)||(37073782-37073827)
chr1 (26-67)||(39888104-39888145)
chr1 (391-428)||(43383959-43383996)
chr1 (18-71)||(48750096-48750149)
chr1 (374-423)||(50011436-50011485)
chr1 (374-431)||(51504505-51504562)
chr1 (374-435)||(52353761-52353822)
[»] chr2 (72 HSPs)
chr2 (18-199)||(4192643-4192827)
chr2 (18-177)||(21570499-21570663)
chr2 (18-176)||(27476982-27477143)
chr2 (18-163)||(32913084-32913230)
chr2 (18-124)||(2808564-2808670)
chr2 (18-124)||(45128085-45128193)
chr2 (18-168)||(3270321-3270472)
chr2 (18-124)||(8971719-8971828)
chr2 (18-124)||(6173513-6173621)
chr2 (18-124)||(27249243-27249351)
chr2 (18-182)||(40660024-40660188)
chr2 (18-177)||(40626120-40626282)
chr2 (30-124)||(36233886-36233980)
chr2 (18-124)||(34598868-34598976)
chr2 (18-124)||(3725062-3725169)
chr2 (18-182)||(9986434-9986607)
chr2 (18-124)||(30420558-30420667)
chr2 (18-124)||(32680673-32680782)
chr2 (18-124)||(7015803-7015910)
chr2 (18-182)||(41712857-41713025)
chr2 (18-124)||(4228013-4228122)
chr2 (18-156)||(459366-459506)
chr2 (18-94)||(26025502-26025579)
chr2 (18-182)||(25086857-25087026)
chr2 (18-168)||(17319163-17319311)
chr2 (18-132)||(39641950-39642067)
chr2 (18-91)||(31581812-31581886)
chr2 (18-104)||(41430929-41431017)
chr2 (30-114)||(42949605-42949690)
chr2 (18-124)||(20047174-20047281)
chr2 (348-435)||(34375138-34375225)
chr2 (18-91)||(8805781-8805855)
chr2 (18-82)||(22421659-22421724)
chr2 (30-123)||(27949306-27949398)
chr2 (331-435)||(37347766-37347870)
chr2 (18-116)||(32197887-32197986)
chr2 (26-117)||(14955389-14955482)
chr2 (43-124)||(30923593-30923672)
chr2 (374-431)||(21848170-21848227)
chr2 (43-101)||(18694951-18695010)
chr2 (57-124)||(24587595-24587662)
chr2 (26-71)||(4904285-4904330)
chr2 (49-118)||(13141352-13141421)
chr2 (374-431)||(26312565-26312622)
chr2 (374-431)||(39446411-39446468)
chr2 (26-71)||(43397260-43397305)
chr2 (368-420)||(8513797-8513848)
chr2 (18-123)||(10237345-10237452)
chr2 (379-431)||(12863529-12863581)
chr2 (27-83)||(23933762-23933818)
chr2 (31-123)||(3308799-3308893)
chr2 (18-124)||(8308054-8308161)
chr2 (18-155)||(9374648-9374780)
chr2 (350-449)||(9733726-9733825)
chr2 (380-430)||(4062552-4062602)
chr2 (18-124)||(9418303-9418408)
chr2 (374-432)||(9583235-9583293)
chr2 (380-430)||(11916028-11916078)
chr2 (377-435)||(15269287-15269345)
chr2 (18-103)||(23903294-23903382)
chr2 (389-447)||(37648276-37648334)
chr2 (30-123)||(39285402-39285496)
chr2 (26-71)||(5428007-5428051)
chr2 (374-431)||(11922038-11922095)
chr2 (26-71)||(11985370-11985415)
chr2 (26-71)||(12648064-12648109)
chr2 (378-431)||(14772902-14772955)
chr2 (374-431)||(16117884-16117941)
chr2 (26-71)||(29279710-29279755)
chr2 (26-71)||(31128919-31128964)
chr2 (387-432)||(34149752-34149797)
chr2 (374-415)||(44677666-44677707)
[»] chr3 (50 HSPs)
chr3 (18-181)||(29503277-29503444)
chr3 (18-132)||(39917489-39917604)
chr3 (18-124)||(4172441-4172549)
chr3 (18-124)||(4178439-4178547)
chr3 (18-182)||(50611509-50611677)
chr3 (18-124)||(25631618-25631727)
chr3 (18-124)||(44907490-44907599)
chr3 (18-124)||(14464382-14464492)
chr3 (18-124)||(36905996-36906104)
chr3 (18-165)||(46934476-46934624)
chr3 (18-124)||(38440670-38440777)
chr3 (18-124)||(49552316-49552423)
chr3 (30-124)||(3850561-3850655)
chr3 (18-165)||(25162270-25162418)
chr3 (18-124)||(2342367-2342474)
chr3 (18-118)||(17237683-17237787)
chr3 (18-124)||(32607343-32607451)
chr3 (30-124)||(12115968-12116062)
chr3 (18-181)||(38855128-38855295)
chr3 (18-124)||(46178451-46178559)
chr3 (49-161)||(36735277-36735389)
chr3 (59-123)||(51202384-51202448)
chr3 (30-124)||(35499307-35499402)
chr3 (49-123)||(22802897-22802971)
chr3 (37-165)||(21487944-21488073)
chr3 (26-71)||(33579772-33579817)
chr3 (30-113)||(42719406-42719489)
chr3 (374-433)||(52744692-52744751)
chr3 (37-182)||(25849636-25849782)
chr3 (374-435)||(13755125-13755186)
chr3 (374-435)||(13768526-13768587)
chr3 (370-481)||(36277729-36277840)
chr3 (18-123)||(37169106-37169213)
chr3 (26-71)||(36461570-36461615)
chr3 (374-431)||(40242157-40242214)
chr3 (26-71)||(45568583-45568628)
chr3 (26-71)||(47896056-47896101)
chr3 (27-109)||(53508085-53508169)
chr3 (80-124)||(6823553-6823597)
chr3 (380-431)||(1294619-1294670)
chr3 (374-460)||(45603407-45603493)
chr3 (374-431)||(1559531-1559588)
chr3 (26-71)||(20987938-20987983)
chr3 (26-71)||(29921957-29922002)
chr3 (26-71)||(29971110-29971155)
chr3 (26-71)||(47042191-47042236)
chr3 (26-71)||(50194423-50194468)
chr3 (26-63)||(52116150-52116187)
chr3 (26-71)||(54148893-54148938)
chr3 (391-432)||(55272863-55272904)
[»] chr7 (56 HSPs)
chr7 (18-176)||(23425464-23425625)
chr7 (18-177)||(48207726-48207886)
chr7 (18-165)||(45199124-45199272)
chr7 (18-181)||(46821832-46822000)
chr7 (18-174)||(42067153-42067311)
chr7 (18-177)||(20116405-20116567)
chr7 (18-181)||(26583532-26583699)
chr7 (18-177)||(1485349-1485509)
chr7 (18-182)||(21266209-21266375)
chr7 (18-182)||(26492182-26492350)
chr7 (18-165)||(42311116-42311265)
chr7 (18-177)||(35667324-35667485)
chr7 (18-181)||(1448922-1449088)
chr7 (18-124)||(2843321-2843427)
chr7 (18-124)||(35496267-35496375)
chr7 (18-124)||(46338930-46339039)
chr7 (18-124)||(433784-433892)
chr7 (18-124)||(22927962-22928070)
chr7 (18-124)||(42408239-42408347)
chr7 (26-165)||(32684521-32684660)
chr7 (18-141)||(36143726-36143850)
chr7 (19-124)||(23085397-23085505)
chr7 (31-123)||(31235898-31235991)
chr7 (18-122)||(1100859-1100963)
chr7 (49-123)||(6001899-6001973)
chr7 (18-124)||(35261174-35261284)
chr7 (18-124)||(3860829-3860935)
chr7 (18-82)||(7740559-7740624)
chr7 (18-109)||(32522019-32522116)
chr7 (18-91)||(14627971-14628046)
chr7 (18-102)||(1575168-1575254)
chr7 (40-91)||(20083241-20083292)
chr7 (377-432)||(43302094-43302149)
chr7 (374-435)||(5513818-5513880)
chr7 (74-168)||(17499796-17499890)
chr7 (74-168)||(17553324-17553418)
chr7 (377-435)||(47841397-47841455)
chr7 (43-83)||(5546277-5546317)
chr7 (363-407)||(8352947-8352991)
chr7 (96-181)||(12539127-12539214)
chr7 (379-435)||(46748010-46748066)
chr7 (26-73)||(12141446-12141493)
chr7 (20-70)||(23786508-23786559)
chr7 (30-92)||(1097709-1097771)
chr7 (18-123)||(1749275-1749380)
chr7 (33-71)||(9450283-9450321)
chr7 (391-433)||(41015395-41015437)
chr7 (29-71)||(48930686-48930728)
chr7 (31-123)||(5078539-5078632)
chr7 (18-62)||(17223091-17223136)
chr7 (377-426)||(19987259-19987308)
chr7 (379-460)||(31330460-31330541)
chr7 (377-422)||(33719480-33719525)
chr7 (389-422)||(34809527-34809560)
chr7 (26-71)||(47590218-47590263)
chr7 (26-71)||(48061330-48061375)
[»] chr8 (50 HSPs)
chr8 (18-181)||(19876042-19876203)
chr8 (19-181)||(44100026-44100191)
chr8 (18-181)||(11196717-11196881)
chr8 (18-182)||(11725506-11725673)
chr8 (18-124)||(2655753-2655862)
chr8 (18-181)||(33342264-33342429)
chr8 (18-136)||(34611676-34611796)
chr8 (36-123)||(14907036-14907123)
chr8 (30-124)||(9619464-9619558)
chr8 (18-177)||(44577867-44578028)
chr8 (18-177)||(42448119-42448283)
chr8 (18-124)||(4808848-4808956)
chr8 (18-124)||(9072601-9072710)
chr8 (18-124)||(35580342-35580449)
chr8 (30-177)||(9498708-9498856)
chr8 (18-123)||(17949132-17949239)
chr8 (18-182)||(33895906-33896074)
chr8 (18-182)||(43890216-43890385)
chr8 (18-116)||(16794185-16794284)
chr8 (31-168)||(28239672-28239811)
chr8 (18-168)||(27747205-27747356)
chr8 (18-168)||(15597259-15597411)
chr8 (56-129)||(29777108-29777181)
chr8 (18-124)||(11464056-11464163)
chr8 (30-124)||(32724595-32724689)
chr8 (18-123)||(37565971-37566079)
chr8 (18-124)||(12173386-12173491)
chr8 (18-124)||(12417814-12417919)
chr8 (363-432)||(29811519-29811588)
chr8 (18-71)||(31013700-31013753)
chr8 (27-75)||(16644491-16644539)
chr8 (18-168)||(33298693-33298847)
chr8 (363-449)||(38937869-38937955)
chr8 (30-71)||(26469338-26469379)
chr8 (18-82)||(43192438-43192503)
chr8 (389-440)||(2603060-2603111)
chr8 (28-86)||(12184209-12184265)
chr8 (28-86)||(12428637-12428693)
chr8 (30-101)||(36532805-36532876)
chr8 (374-432)||(5535766-5535824)
chr8 (380-430)||(14728896-14728946)
chr8 (374-408)||(18806541-18806575)
chr8 (380-430)||(30905537-30905587)
chr8 (31-69)||(40619215-40619253)
chr8 (26-71)||(3240283-3240328)
chr8 (379-408)||(5217893-5217922)
chr8 (26-71)||(20559883-20559928)
chr8 (26-71)||(20571445-20571490)
chr8 (377-430)||(31226445-31226498)
chr8 (378-427)||(37673733-37673782)
[»] chr5 (56 HSPs)
chr5 (18-155)||(781239-781376)
chr5 (21-165)||(21060377-21060522)
chr5 (18-181)||(7887030-7887196)
chr5 (30-168)||(20257800-20257938)
chr5 (18-159)||(35475429-35475571)
chr5 (18-177)||(27266951-27267115)
chr5 (19-168)||(36344583-36344733)
chr5 (30-177)||(34881535-34881683)
chr5 (18-181)||(7241603-7241770)
chr5 (18-181)||(7246779-7246946)
chr5 (30-123)||(10649334-10649427)
chr5 (19-123)||(43261912-43262016)
chr5 (18-124)||(18677557-18677666)
chr5 (18-124)||(19281037-19281144)
chr5 (18-177)||(30371549-30371713)
chr5 (30-124)||(26578129-26578223)
chr5 (18-121)||(16981173-16981277)
chr5 (18-124)||(28235465-28235572)
chr5 (18-181)||(27751735-27751913)
chr5 (18-113)||(2057930-2058027)
chr5 (18-124)||(7150427-7150535)
chr5 (18-124)||(43148610-43148718)
chr5 (49-124)||(11767687-11767762)
chr5 (37-181)||(19259925-19260067)
chr5 (30-181)||(42579698-42579854)
chr5 (18-122)||(15570791-15570897)
chr5 (18-82)||(30298130-30298195)
chr5 (24-181)||(41184549-41184703)
chr5 (18-91)||(27576442-27576516)
chr5 (30-123)||(3271514-3271606)
chr5 (16-124)||(6445816-6445925)
chr5 (18-123)||(14211082-14211187)
chr5 (27-102)||(35631792-35631869)
chr5 (43-104)||(8514796-8514857)
chr5 (43-124)||(28097033-28097113)
chr5 (374-435)||(41520834-41520895)
chr5 (374-435)||(42551052-42551113)
chr5 (382-435)||(42951699-42951752)
chr5 (31-123)||(2979457-2979551)
chr5 (378-425)||(11200495-11200542)
chr5 (46-124)||(11192247-11192324)
chr5 (18-91)||(1582215-1582288)
chr5 (18-91)||(1602527-1602600)
chr5 (26-71)||(8096637-8096682)
chr5 (26-71)||(11977076-11977121)
chr5 (18-124)||(7036076-7036186)
chr5 (17-83)||(42432821-42432888)
chr5 (27-124)||(7613159-7613265)
chr5 (363-433)||(35463188-35463258)
chr5 (43-104)||(3166259-3166320)
chr5 (26-71)||(6216803-6216848)
chr5 (26-71)||(15571390-15571435)
chr5 (378-431)||(18396495-18396548)
chr5 (26-71)||(24229924-24229969)
chr5 (26-71)||(26878218-26878263)
chr5 (30-67)||(41749230-41749267)
[»] scaffold0311 (1 HSPs)
scaffold0311 (18-181)||(8540-8704)
[»] scaffold0495 (1 HSPs)
scaffold0495 (18-124)||(5275-5383)
[»] scaffold0146 (1 HSPs)
scaffold0146 (18-118)||(16412-16516)
[»] scaffold0003 (1 HSPs)
scaffold0003 (18-181)||(361891-362053)
[»] scaffold0014 (1 HSPs)
scaffold0014 (18-87)||(201464-201534)
[»] scaffold0426 (1 HSPs)
scaffold0426 (44-182)||(6156-6295)
[»] scaffold0264 (1 HSPs)
scaffold0264 (47-158)||(20517-20626)
[»] scaffold0002 (1 HSPs)
scaffold0002 (18-83)||(453851-453917)
[»] scaffold0113 (1 HSPs)
scaffold0113 (27-103)||(36788-36864)
[»] scaffold0608 (1 HSPs)
scaffold0608 (86-165)||(78-157)
[»] scaffold0372 (1 HSPs)
scaffold0372 (18-103)||(9711-9799)
[»] scaffold0888 (1 HSPs)
scaffold0888 (18-71)||(1806-1859)
[»] scaffold0009 (1 HSPs)
scaffold0009 (26-71)||(58219-58264)


Alignment Details
Target: chr4 (Bit Score: 611; Significance: 0; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 611; E-Value: 0
Query Start/End: Original strand, 18 - 795
Target Start/End: Original strand, 37188686 - 37189468
Alignment:
Q  18 gaaatcacaaagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgac 117  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||    
T  37188686 gaaatcacaaagaaaaaactagatatatgtgaaaatcacttatttagattgaaatatagagaaaaagatgaagatgagtgatttcaggtcaataattgac 37188785  T
Q  118 ccaaaacaactcctcgatggaaaatctagaagagaaaacttagagaga--aaactagggccggcttaactttttatgatatgatgtgcttttcaattatt 215  Q
    ||||||| ||||||||||| ||||||||||||||||||| ||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  37188786 ccaaaaccactcctcgatgaaaaatctagaagagaaaacctagagagagaaaactagggccggcttaactttctatgatatgatgtgcttttcaattatt 37188885  T
Q  216 tatcttttattatctnnnnnnn-tgcttgacctctgagttgatttattttaaaaaataagcttcgagagatgcaaatacattaggaagtcacttgttatt 314  Q
    |||||||||||||||        ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37188886 tatcttttattatctaaaaaaaatgcttaacctctgagttgatttattttaaaaaataagcttcgacagatgcaaatacattaggaagtcacttgttatt 37188985  T
Q  315 tgagtgtataagaatatctacaatggaaaaatttatttttggatacccaaatagattttacgtgtacacataacttatttataattttttaataataata 414  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37188986 tgagtgtataagaatatctacaatggagaaatctatttttggatacctaaatagattttacatgtacacataacttatttataattttttaataataata 37189085  T
Q  415 cataataagtactcaatccctgcaattcaacatctaacataaatttgcttaaaacaaacccactaattagattaccaactcttagatattactttctgct 514  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||    
T  37189086 cataataattactcaatccatgcaattcaacatctaacataaatttgcttaaaacacacctactaattagattaccaactcttagatattacattctgct 37189185  T
Q  515 tgtaactacatannnnnnnctcagtcaccaaattcatacaaaaaatatttaaaaacacttgtcattttatcctcttttgctctttgaa--atatataaaa 612  Q
    ||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||    
T  37189186 tgtaactacatatttttttctcagtcaccaaattcatacaaaaaatatttaaaaacacttgtcattttttcctcttttgctctttgaaatatatataaaa 37189285  T
Q  613 tagaaagagttggccatcatacattcgagcgtttagagtagccaaccagtctaaccaaaaaatcattttgtcaaagagaaagttgaactaactaaaaatt 712  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  37189286 tagaaagagttggccatcatacatttgagcgtttagagtagccaaccagtctaaccaaaaaaccattttgtcaaatagaaagttgaactaactaaaaatt 37189385  T
Q  713 gcaaaagctcttgatggttcttccgaactaccctccttcaaatctctctcaatctatataagaccacccactatccctatgct 795  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  37189386 gcaaaagctcttgatggttcatccgaactaccctccttcaaatctctctcaatctatataagatcacccactatccctatgct 37189468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 692 - 795
Target Start/End: Complemental strand, 37180489 - 37180386
Alignment:
Q  692 aagttgaactaactaaaaattgcaaaagctcttgatggttcttccgaactaccctccttcaaatctctctcaatctatataagaccacccactatcccta 791  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37180489 aagttgaactaactaaaaattgcaaaagctcttgatggttcttccgaactaccctccttcaaatctatctcaatctatataagaccacccactatcccta 37180390  T
Q  792 tgct 795  Q
    ||||    
T  37180389 tgct 37180386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 10389846 - 10390012
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||| || |||||||| ||||| ||||||||| | ||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||||    
T  10389846 gaaatcaaaaggaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagatgagtgatttcaggtcaagaattga 10389945  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaacttag--agagaaaactagggccggctt 181  Q
    |||||||| || |||| ||| | || ||| |||||||||| |||  |||||||||||||||||||||    
T  10389946 cccaaaaccacccctcaatgaagaaactataagagaaaacctagaaagagaaaactagggccggctt 10390012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 18 - 168
Target Start/End: Original strand, 34024529 - 34024680
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||    
T  34024529 gaaatcaaaaagaaaaaacctagatctatgtgaaaataacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtcaagaattga 34024628  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaacttagagagaaaa 168  Q
     ||||||| || |||| ||| | || ||| |||| ||||  |||||||||||    
T  34024629 tccaaaaccacccctcaatgaagaaactaaaagaaaaaatctagagagaaaa 34024680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 43444390 - 43444223
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||| |||| |||||    
T  43444390 gaaattacaaagaaaaaaacctagatatatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatgggtgatttcagatcaaaaattg 43444291  T
Q  116 acccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggctt 181  Q
    ||||||||| || |||| ||| |  |  |  |||||||||| |  |||||||||||||||||||||||    
T  43444290 acccaaaactacccctcaatgaaggaattgtaagagaaaacctagagagagaaaactagggccggctt 43444223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 868159 - 867987
Alignment:
Q  18 gaaatcacaaagaaaaaactagatatatgtgaaaataacttatttagattgaaatat-------agagaaaaagatgaagatggatgatttcaggtcaag 110  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |       ||||||||||||||||| || |||||||| ||||||    
T  868159 gaaatcacaaagaaaaatctagatctatgtgaaaataacttatttagattgaaatttgaaatagagagaaaaagatgaagaggggtgatttcatgtcaag 868060  T
Q  111 aattgacccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggctt 181  Q
    ||| |||| ||||| || |||| ||| | || || ||||||||||| |  |||||||||||||||||||||||    
T  868059 aatcgacctaaaaccacccctcaatgaagaaactggaagagaaaacctagagagagaaaactagggccggctt 867987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 18 - 173
Target Start/End: Original strand, 38706802 - 38706959
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||||  ||| || ||||||||||| ||||||||||||||||||| ||||||||||||||||| || |||||| || ||||||||||    
T  38706802 gaaatcacaaagaaaaaaacctaaatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagaagggtgattttagatcaagaattg 38706901  T
Q  116 acccaaaacaactcctcgatggaaaatctagaagagaaaacttagagagaaaactagg 173  Q
    ||||||||| || |||| ||| | || |   |||| ||||| ||||||||||||||||    
T  38706902 acccaaaaccacccctcaatgaagaaacagtaagaaaaaacctagagagaaaactagg 38706959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 1531905 - 1531736
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagaga-aaaagatgaagatggatgatttcaggtcaagaat 113  Q
    ||||||||||||||||||   |||||| ||||||||||| ||||||||||||||||||| ||||| ||||||| |||| || ||||||||||||||||||    
T  1531905 gaaatcacaaagaaaaaaaatctagatctatgtgaaaatcacttatttagattgaaatagagagagaaaagataaagaggggtgatttcaggtcaagaat 1531806  T
Q  114 tgacccaaaacaactcctcgatggaaaatctagaagagaaaacttag--agagaaaactagggccggctt 181  Q
    |||||||| || || |||| ||| | || ||  |||||||||| |||  ||||||||||||| |||||||    
T  1531805 tgacccaataccacccctcaatgaagaaactgtaagagaaaacctagaaagagaaaactaggaccggctt 1531736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 51317982 - 51317846
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtc-aagaattg 115  Q
    ||||||| ||||||||||| ||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||  |||||||||||| ||||||||    
T  51317982 gaaatcaaaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagatgagtgatttcaggtcaaagaattg 51317883  T
Q  116 acccaaaacaactcctcgatggaaaatctagaagaga 152  Q
    ||||||||  || |||| ||| | || ||||||||||    
T  51317882 acccaaaatcacccctcaatgaagaaactagaagaga 51317846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 10359639 - 10359746
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    |||||||| |||||||||| ||||||||||| ||||| |||||||||||| |||||| |||||||||||||||| ||| |||||||||||||| ||||||    
T  10359639 gaaatcacgaagaaaaaacctagatatatgttaaaatcacttatttagatcgaaatagagagaaaaagatgaagttgggtgatttcaggtcaaaaattga 10359738  T
Q  117 cccaaaac 124  Q
    ||||||||    
T  10359739 cccaaaac 10359746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 9645641 - 9645808
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    |||||| |||||||||||  |||||| ||||||||| | ||||||||||||||||||| ||| ||||||||||||| || |||| |||||||||||||||    
T  9645641 gaaatcgcaaagaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagacaaaaagatgaagaggggtgatatcaggtcaagaattg 9645740  T
Q  116 acccaaaacaactcctcgatggaaaatctagaagagaaaacttagag--agaaaactagggccggctt 181  Q
    ||||||||| || |||| ||| | || ||  |||| ||| | |||||  |||||||||||||||||||    
T  9645741 acccaaaacgacccctcaatgaagaaactgtaagataaagcctagagaaagaaaactagggccggctt 9645808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 50766601 - 50766709
Alignment:
Q  18 gaaatcacaaagaaaaaac--tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||| ||||||||||||   ||||| ||||||||||| | ||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||    
T  50766601 gaaattacaaagaaaaaaacttagatctatgtgaaaatcatttatttagattgaaataaagagaaaaagatgaagagggatgatttcagatcaagaattg 50766700  T
Q  116 acccaaaac 124  Q
    |||||||||    
T  50766701 acccaaaac 50766709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 56194598 - 56194488
Alignment:
Q  18 gaaatcacaaagaaaaaa----ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaat 113  Q
    ||||||||||||||||||    |||||| ||||||||| | ||||||||||||||||||| ||||||||||||||||| |  ||||||||||||||||||    
T  56194598 gaaatcacaaagaaaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggtttgatttcaggtcaagaat 56194499  T
Q  114 tgacccaaaac 124  Q
    |||||||||||    
T  56194498 tgacccaaaac 56194488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 25273880 - 25273705
Alignment:
Q  18 gaaatcacaaagaaaaaa-----ctagatatatgtgaaaataacttatttagattgaaatatagagaaa-----aagatgaagatggatgatttcaggtc 107  Q
    ||||||||||||||||||     |||||| ||||||||||| ||||||||||||||||||| |||||||     |||||||||| || ||||||||||||    
T  25273880 gaaatcacaaagaaaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaagatgaagatgaagaggggtgatttcaggtc 25273781  T
Q  108 aagaattgacccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggctt 181  Q
    ||||||||| ||||||| || |||| ||||| || ||  |||||||||  |  |||||||||||||||||||||||    
T  25273780 aagaattgatccaaaaccacccctcaatggagaaactgtaagagaaaatctagagagagaaaactagggccggctt 25273705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 9528969 - 9529078
Alignment:
Q  18 gaaatcacaaagaaaaaac---tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||||||||||||||||    || || ||||||||||| ||||||||||||||||||| |||||||||||| |||| || |||||||||||||||||||    
T  9528969 gaaatcacaaagaaaaaaaacataaatctatgtgaaaatcacttatttagattgaaataaagagaaaaagataaagaggggtgatttcaggtcaagaatt 9529068  T
Q  115 gacccaaaac 124  Q
    ||||||||||    
T  9529069 gacccaaaac 9529078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 31381764 - 31381871
Alignment:
Q  18 gaaatcacaaagaaaaaact-agatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    |||||||||||||||||||| |||| ||||||||||| ||||||||| ||||||| | ||||||||||||||  | || |||||||||||||||||||||    
T  31381764 gaaatcacaaagaaaaaacttagatctatgtgaaaatcacttatttaaattgaaaaagagagaaaaagatgagaaggggtgatttcaggtcaagaattga 31381863  T
Q  117 cccaaaac 124  Q
    ||||||||    
T  31381864 cccaaaac 31381871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 8009453 - 8009526
Alignment:
Q  18 gaaatcacaaagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaaga 91  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  8009453 gaaatcacaaagaaaaaactagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaaga 8009526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 165
Target Start/End: Complemental strand, 21090149 - 21090000
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    |||||||| |||||||||| || || ||||||||||| ||||||||| ||||||||| |||||||||||||||||||  ||||||||| ||||  |||||    
T  21090149 gaaatcacgaagaaaaaacctaaatctatgtgaaaatcacttatttatattgaaatagagagaaaaagatgaagatgagtgatttcagatcaaagattga 21090050  T
Q  117 cccaaaa-caactcctcgatggaaaatctagaagagaaaacttagagaga 165  Q
    ||||||| || | |||| ||| | || |||||||||||||| ||||||||    
T  21090049 cccaaaaccaccccctcaatgaagaaactagaagagaaaacctagagaga 21090000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 122
Target Start/End: Original strand, 53616742 - 53616849
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||| ||||||||||||   |||||| ||||||||||| ||||||||||||||||||| |||||||| ||||||||  | |||||||||||||||||||    
T  53616742 gaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaacgatgaagagtggtgatttcaggtcaagaatt 53616841  T
Q  115 gacccaaa 122  Q
    ||||||||    
T  53616842 gacccaaa 53616849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 47416881 - 47416774
Alignment:
Q  18 gaaatcacaaagaaaaaac--tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||| ||||||||||||   ||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||| || |||||||| ||||| |||||    
T  47416881 gaaattacaaagaaaaaaacttagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaagtcaataattg 47416782  T
Q  116 acccaaaa 123  Q
    ||||||||    
T  47416781 acccaaaa 47416774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 18 - 163
Target Start/End: Original strand, 35965067 - 35965214
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaa-taacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    |||||||| || ||||||| ||||| |||||||||| | ||||||| ||||||||||| |||||||||||||||||  | ||||||||||| || |||||    
T  35965067 gaaatcacgaaaaaaaaacctagatctatgtgaaaaatcacttattcagattgaaatagagagaaaaagatgaagagaggtgatttcaggtaaaaaattg 35965166  T
Q  116 acccaaaacaactcctcgatggaaaatctagaagagaaaacttagaga 163  Q
    ||||||||| || |||| ||| | ||||| ||||||||||| ||||||    
T  35965167 acccaaaaccacccctcaatgaagaatctggaagagaaaacctagaga 35965214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 20569235 - 20569141
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaac 124  Q
    ||||| |||||| ||||||||||| | ||||||||||||||||| ||||||||| ||||||| || ||||||||||| |||||||||||||||||    
T  20569235 aaaaacctagatctatgtgaaaatcatttatttagattgaaataaagagaaaaaaatgaagaggggtgatttcaggttaagaattgacccaaaac 20569141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 43154127 - 43154220
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaac 124  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||| |||| |||||||||||| || |||||||| ||||||||||||||||||||    
T  43154127 aaaaacctagatctatgtgaaaatcacttatttagattgaaatagagag-aaaagatgaagaggggtgatttcaagtcaagaattgacccaaaac 43154220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 2115679 - 2115788
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||| ||||||||||||   ||| || ||||||||||| ||||||||||||||||||| |||||||||||||||||    |||||||||||||| ||||    
T  2115679 gaaattacaaagaaaaaaaacctaaatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaaaagtgatttcaggtcaataatt 2115778  T
Q  115 gacccaaaac 124  Q
    ||||||||||    
T  2115779 gacccaaaac 2115788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 9283894 - 9283800
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaac 124  Q
    ||||| |||||| ||||| ||||| ||||||||||||||||||| |||||||| |||||||| || ||||||||||| ||| |||||||||||||    
T  9283894 aaaaacctagatctatgtaaaaatcacttatttagattgaaataaagagaaaacgatgaagaggggtgatttcaggttaagtattgacccaaaac 9283800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 2624495 - 2624327
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatata-gagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    |||||||| |||||||||  |||||| ||||||||||| ||||||||||||||||||| |  | |||||||||| ||||  | |||||||||||| |||     
T  2624495 gaaatcacgaagaaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagactataaaaagatgatgatgagttatttcaggtcaaaaatc 2624396  T
Q  115 gacccaaaacaactcctcgatggaaaatctagaagagaaaacttagagag--aaaactagggccggctt 181  Q
     ||||||||  || |||| ||  | || |||||||||||||| |||||||  |||||||||||||||||    
T  2624395 aacccaaaatcacccctcaataaagaaactagaagagaaaacctagagagaaaaaactagggccggctt 2624327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 4643855 - 4643690
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaaga--tggatgatttcaggtcaagaa 112  Q
    ||||||||||||||||||   |||||| ||||||||| | ||||||||||||||||||| |||||||||||||||||   || |||||||||||||| ||    
T  4643855 gaaatcacaaagaaaaaaaatctagatctatgtgaaa-tcacttatttagattgaaatagagagaaaaagatgaagaggggggtgatttcaggtcaaaaa 4643757  T
Q  113 ttgacccaaaacaactcctcgatggaaaatctagaagagaaaacttag--agagaaaactagggccg 177  Q
    || ||| ||||| || |||| ||| | |  ||  |||||||||| |||  |||||||||||||||||    
T  4643756 ttcacctaaaaccacccctcaatgaagagactgtaagagaaaacctagaaagagaaaactagggccg 4643690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 49 - 123
Target Start/End: Original strand, 5333584 - 5333658
Alignment:
Q  49 aaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaa 123  Q
    ||||| ||||||||| ||||||||| |||||||||||||||||||  |||||||||||||| |||||||||||||    
T  5333584 aaaatcacttatttatattgaaatagagagaaaaagatgaagatgtgtgatttcaggtcaaaaattgacccaaaa 5333658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 692 - 790
Target Start/End: Original strand, 37181259 - 37181355
Alignment:
Q  692 aagttgaactaactaaaaattgcaaaagctcttgatggttcttccgaactaccctccttcaaatctctctcaatctatataagaccacccactatccct 790  Q
    |||||||||||||| |||||||||||||||||| || ||||| || ||| || ||||||||||||||||||| |||||||||||||| |||||| ||||    
T  37181259 aagttgaactaacttaaaattgcaaaagctctt-atagttct-ccaaacaactctccttcaaatctctctcactctatataagaccatccactacccct 37181355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 32952840 - 32952913
Alignment:
Q  18 gaaatcacaaagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaaga 91  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||  |||||||| |||||||||||||||||    
T  32952840 gaaatcacaaagaaaaaactagatctatgtgaaaaacacttatttaatttgaaatagagagaaaaagatgaaga 32952913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 6972807 - 6972698
Alignment:
Q  18 gaaatcacaaagaaaaaac---tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||||||||||||||||    | ||| ||||| ||| | ||||||||||||||||||| ||| |||||||||||||  | ||||||||| |||||||||    
T  6972807 gaaatcacaaagaaaaaaaacatggatctatgtaaaagtcacttatttagattgaaatacagataaaaagatgaagagaggtgatttcagatcaagaatt 6972708  T
Q  115 gacccaaaac 124  Q
    ||||||||||    
T  6972707 gacccaaaac 6972698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 19 - 169
Target Start/End: Complemental strand, 35261187 - 35261032
Alignment:
Q  19 aaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatataga-gaaaaagatgaagatg----gatgatttcaggtcaagaa 112  Q
    ||||||| |||||||||| || || ||||||||||| |||||||||||||| |||| ||| |||||||||||||| |    ||| |||||||||||| ||    
T  35261187 aaatcacgaagaaaaaacctaaatctatgtgaaaatcacttatttagattgcaataaagaggaaaaagatgaagaggggatgattatttcaggtcaaaaa 35261088  T
Q  113 ttgacccaaaacaactcctcgatggaaaatctagaagagaaaacttagagagaaaac 169  Q
    |||||||||||  || |||| ||| | || | |||||||||||| ||||||||||||    
T  35261087 ttgacccaaaatcac-cctcaatgaagaaacgagaagagaaaacctagagagaaaac 35261032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 1008278 - 1008185
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaa 123  Q
    ||||||||| || ||||||||||| ||||||||||||| ||||| ||||||||||||| |||||  |||||||| |||||  ||||| ||||||    
T  1008278 aaaaaactaaatttatgtgaaaatcacttatttagattaaaatagagagaaaaagatgcagatgagtgatttcaagtcaaatattgatccaaaa 1008185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 12265438 - 12265345
Alignment:
Q  31 aaaaactagatatatgtgaaaa-taacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaa 123  Q
    |||| |||||| |||||||||| | |||||||||||||||||||  || ||||||||||||| || |||||||||||||| |||||||| ||||    
T  12265438 aaaacctagatctatgtgaaaaatcacttatttagattgaaatagggataaaaagatgaagaggggtgatttcaggtcaaaaattgaccaaaaa 12265345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 38 - 123
Target Start/End: Original strand, 27593952 - 27594036
Alignment:
Q  38 agatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaa 123  Q
    |||| ||||||||| |  |||||||||||||||||||||||||||||||||||| || |||||||| ||||| |||||||| ||||    
T  27593952 agatctatgtgaaactcgcttatttagattgaaatatagagaaaaagatgaaga-gggtgatttcatgtcaaaaattgacctaaaa 27594036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 5333656 - 5333730
Alignment:
Q  49 aaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaac 124  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||| || |||||||| ||||| ||||||||||||||    
T  5333656 aaaatcacttatttatattgaaatagagagaaaaagatgaaga-gggtgatttcatgtcaaaaattgacccaaaac 5333730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 566 - 630
Target Start/End: Complemental strand, 38704666 - 38704602
Alignment:
Q  566 aaaacacttgtcattttatcctcttttgctctttgaaatatataaaatagaaagagttggccatc 630  Q
    ||||||||||| |||||||||| ||| ||||||| ||| |||||||| |||||||||||||||||    
T  38704666 aaaacacttgtgattttatcctatttagctctttaaaacatataaaacagaaagagttggccatc 38704602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 18139005 - 18139112
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaa-taacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    |||||||  |||||||||| ||||| |||||||||| | ||||||||||||||||||| |||||||| |||||||| |  ||||| |||||||| ||||     
T  18139005 gaaatcattaagaaaaaacctagatgtatgtgaaaaatcacttatttagattgaaatagagagaaaatgatgaagaggtgtgattccaggtcaaaaattt 18139104  T
Q  116 acccaaaa 123  Q
    ||| ||||    
T  18139105 acctaaaa 18139112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 49126218 - 49126325
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaa-taacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    |||||||  |||||||||| ||||| |||||||||| | ||||||||||||||||||| |||||||| |||||||| |  ||||| |||||||| ||||     
T  49126218 gaaatcattaagaaaaaacctagatgtatgtgaaaaatcacttatttagattgaaatagagagaaaatgatgaagaggtgtgattccaggtcaaaaattt 49126317  T
Q  116 acccaaaa 123  Q
    ||| ||||    
T  49126318 acctaaaa 49126325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 41255532 - 41255582
Alignment:
Q  77 agaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaacaac 127  Q
    |||||||||||||||| |||||||| ||||||| |||||||||||||||||    
T  41255532 agaaaaagatgaagattgatgattttaggtcaaaaattgacccaaaacaac 41255582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 21554901 - 21554990
Alignment:
Q  18 gaaatcacaaagaaaaaa-ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggt 106  Q
    |||||||||||||||| | |||||| ||||||||||| |||||||| || ||||||| | | |||||||| ||||||  |||||||||||    
T  21554901 gaaatcacaaagaaaatatctagatttatgtgaaaatcacttatttcgaatgaaataaatataaaaagattaagatgcgtgatttcaggt 21554990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 29965632 - 29965565
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagagaaaa 82  Q
    ||||| ||||||||||||   |||||| ||||||||||| ||||||||||||||||||| ||||||||    
T  29965632 gaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaa 29965565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 378 - 435
Target Start/End: Original strand, 35308961 - 35309018
Alignment:
Q  378 gtacacataacttatttataattttttaataataatacataataagtactcaatccct 435  Q
    |||||| | |||||||||||||||||||||| |||||  |||||||||||||||||||    
T  35308961 gtacacgtcacttatttataattttttaatagtaatatctaataagtactcaatccct 35309018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 165
Target Start/End: Complemental strand, 44947320 - 44947251
Alignment:
Q  96 tgatttcaggtcaagaattgacccaaaacaactcctcgatggaaaatctagaagagaaaacttagagaga 165  Q
    ||||||||||||||||||||||||||||| || |||| ||| | || ||  |||||||||||||||||||    
T  44947320 tgatttcaggtcaagaattgacccaaaaccacccctcaatgaagaaactgtaagagaaaacttagagaga 44947251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 49680520 - 49680459
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaaga 91  Q
    ||||| ||||||  |||||||||| |||||||| |||||||||| |||||||||||||||||    
T  49680520 aaaaacctagatccatgtgaaaatcacttatttggattgaaataaagagaaaaagatgaaga 49680459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 87
Target Start/End: Complemental strand, 14183800 - 14183729
Alignment:
Q  18 gaaatcacaaagaaaaaac--tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatg 87  Q
    ||||||||||||||||||   |||||   ||||||||| ||||||||||||||||||| |||||||||||||    
T  14183800 gaaatcacaaagaaaaaaacttagatccttgtgaaaatcacttatttagattgaaatagagagaaaaagatg 14183729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 44516203 - 44516271
Alignment:
Q  363 aaatagattttacgtgtacacataacttatttataattttttaataataatacataataagtactcaat 431  Q
    |||||||||| || ||||||||| | ||||||||||||||||||||| |||| ||| |||| |||||||    
T  44516203 aaatagatttcacatgtacacatcatttatttataattttttaataaaaatatatattaagaactcaat 44516271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 52978795 - 52978747
Alignment:
Q  25 caaagaaaaaactagatatatgtgaaaataacttatttagattgaaata 73  Q
    ||||| ||||||| ||||||||||||||| |||||||||||||||||||    
T  52978795 caaaggaaaaacttgatatatgtgaaaatcacttatttagattgaaata 52978747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 374 - 481
Target Start/End: Complemental strand, 2396450 - 2396344
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataataatacataataagtactcaatccctgcaattcaacatctaacataaatttgcttaaaacaaac 473  Q
    |||||||||||| ||||||||||||||| |||||| || ||| ||||||| |||||||| ||  || ||| ||||| ||| |||||| ||||||   |||    
T  2396450 acgtgtacacatcacttatttataatttgttaatagtagtacctaataagaactcaatcgctcaaactcagcatctcacaaaaattt-cttaaatggaac 2396352  T
Q  474 ccactaat 481  Q
    ||||||||    
T  2396351 ccactaat 2396344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 124
Target Start/End: Original strand, 3338816 - 3338863
Alignment:
Q  77 agaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaac 124  Q
    |||||||||||||||| |||||||| ||||||| ||||||||||||||    
T  3338816 agaaaaagatgaagattgatgattttaggtcaaaaattgacccaaaac 3338863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 1931853 - 1931947
Alignment:
Q  74 tagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaacaactcctcgatggaaaatctagaagagaaaacttagagagaaaa 168  Q
    ||||||||||||||||||||  ||||||||||| ||  |||||||| |||| ||  ||| ||| | || |||||||||||||| || ||||||||    
T  1931853 tagagaaaaagatgaagatgagtgatttcaggttaaatattgacccgaaaccacctctcaatgaagaaactagaagagaaaacctaaagagaaaa 1931947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 3336250 - 3336304
Alignment:
Q  19 aaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaat 72  Q
    ||||||| |||||||||| |||||| ||||||||||||||| |||||||||||||    
T  3336250 aaatcacgaagaaaaaacctagatagatgtgaaaataacttgtttagattgaaat 3336304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 23329156 - 23329094
Alignment:
Q  27 aagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaa 89  Q
    ||||||||||||||  ||||||||||| | |||||||| |||||||| ||| |||||||||||    
T  23329156 aagaaaaaactagacgtatgtgaaaatcagttatttaggttgaaatagagataaaaagatgaa 23329094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 374 - 432
Target Start/End: Original strand, 35331956 - 35332014
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataataatacataataagtactcaatc 432  Q
    |||| ||||||| ||||||||||| |||||||||| || ||||||||||| ||||||||    
T  35331956 acgtatacacattacttatttatacttttttaatagtagtacataataagcactcaatc 35332014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 9713877 - 9713832
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||||| |||||||||| |||| |||||||||||||||||    
T  9713877 aaagaaaaaacttgatatatgtggaaatcacttatttagattgaaa 9713832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 392 - 433
Target Start/End: Original strand, 29857109 - 29857150
Alignment:
Q  392 tttataattttttaataataatacataataagtactcaatcc 433  Q
    |||||||||||||||||||||||||||||||  |||||||||    
T  29857109 tttataattttttaataataatacataataatcactcaatcc 29857150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 363 - 423
Target Start/End: Complemental strand, 32139986 - 32139926
Alignment:
Q  363 aaatagattttacgtgtacacataacttatttataattttttaataataatacataataag 423  Q
    |||| ||||| ||||||| |||| |||| |||||||||||||||||| |||||||| ||||    
T  32139986 aaatggatttcacgtgtatacatcacttgtttataattttttaataaaaatacatattaag 32139926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 46991236 - 46991329
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagaga---aaaagatgaagatggatgatttcaggtcaagaattgacccaaaa 123  Q
    ||||| |||||| ||||||||||| ||| ||||||||||||||| |||||   |||| |||||||||  ||||||   ||||| |||||||||||||    
T  46991236 aaaaatctagatctatgtgaaaatcactcatttagattgaaatagagagaaataaaatatgaagatgagtgattt---gtcaaaaattgacccaaaa 46991329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 165
Target Start/End: Complemental strand, 50179698 - 50179619
Alignment:
Q  86 tgaagatggatgatttcaggtcaagaattgacccaaaacaactcctcgatggaaaatctagaagagaaaacttagagaga 165  Q
    ||||||||  ||||||||||| ||||||||||||||||| || |||| ||||| || ||  |||||||||  ||||||||    
T  50179698 tgaagatgagtgatttcaggttaagaattgacccaaaaccacccctcaatggagaaactgtaagagaaaagctagagaga 50179619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 393 - 460
Target Start/End: Original strand, 53096599 - 53096666
Alignment:
Q  393 ttataattttttaataataatacataataagtactcaatccctgcaattcaacatctaacataaattt 460  Q
    |||||||||||||||| |||||| ||||||| |||||||||||  ||  |||||||| ||| ||||||    
T  53096599 ttataattttttaatagtaatacttaataagaactcaatccctttaacccaacatctcacacaaattt 53096666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 129
Target Start/End: Complemental strand, 54021831 - 54021725
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa-tatagag--aaaaagatgaagatggatgatttcaggtcaagaattgacccaaa 122  Q
    |||| ||||||| ||||||||||||||  |||||||||||||||||  | ||||  ||||||||| ||| ||||||||| | ||||| || ||||| |||    
T  54021831 aaaggaaaaactggatatatgtgaaaaccacttatttagattgaaagaaaagaggaaaaaagatgtagagggatgattttatgtcaaaaaatgacctaaa 54021732  T
Q  123 acaactc 129  Q
    || ||||    
T  54021731 accactc 54021725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 377 - 435
Target Start/End: Original strand, 822355 - 822413
Alignment:
Q  377 tgtacacataacttatttataattttttaataataatacataataagtactcaatccct 435  Q
    ||||||||| | ||||||||| |||||||||| || ||  |||||||||||||||||||    
T  822355 tgtacacatcatttatttatagttttttaatagtagtatctaataagtactcaatccct 822413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 377 - 423
Target Start/End: Complemental strand, 11254000 - 11253954
Alignment:
Q  377 tgtacacataacttatttataattttttaataataatacataataag 423  Q
    |||||| |||| ||||||||||||||||||||| |||| ||||||||    
T  11254000 tgtacaaataatttatttataattttttaataaaaatatataataag 11253954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 21365187 - 21365275
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttca 103  Q
    |||||||| |||||||||   |||||||||||| ||||  ||||||||| ||| ||||  |||||||||||| ||| ||||| ||||||    
T  21365187 gaaatcacgaagaaaaaaaatctagatatatgtcaaaaccacttatttatattaaaatggagagaaaaagataaaggtggataatttca 21365275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 374 - 432
Target Start/End: Complemental strand, 45833999 - 45833942
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataataatacataataagtactcaatc 432  Q
    |||||||||||| ||| |||||||||||||||||| |||||  ||||||| ||||||||    
T  45833999 acgtgtacacatcactcatttataattttttaatagtaata-ttaataagcactcaatc 45833942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 49072876 - 49072922
Alignment:
Q  43 tatgtgaaaataacttatttagattgaaatatagagaaaaagatgaa 89  Q
    ||||||||||| |||||| |||||||||||| ||||||||| |||||    
T  49072876 tatgtgaaaatcacttatatagattgaaataaagagaaaaatatgaa 49072922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 3821881 - 3821922
Alignment:
Q  22 tcacaaagaaaaaactagatatatgtgaaaataacttattta 63  Q
    |||| |||||||||||| |||||||||||||||| |||||||    
T  3821881 tcacgaagaaaaaactaaatatatgtgaaaataatttattta 3821922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 5119309 - 5119264
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||| ||||||| ||||||||||||||  |||||||||||||||||    
T  5119309 aaaggaaaaacttgatatatgtgaaaaccacttatttagattgaaa 5119264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 374 - 431
Target Start/End: Original strand, 10180586 - 10180643
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataataatacataataagtactcaat 431  Q
    ||||||||| || ||| |||||||||||||||||| || ||| ||||||| |||||||    
T  10180586 acgtgtacatatcactcatttataattttttaatagtagtacctaataagaactcaat 10180643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 13634085 - 13634040
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||||| |||| |||||||||  |||||||||||||||||    
T  13634085 aaagaaaaaacttgatagatgtgaaaaccacttatttagattgaaa 13634040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 22038940 - 22038985
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||||| |||| |||||||||| |||||||||||| ||||    
T  22038940 aaagaaaaaacttgatagatgtgaaaatcacttatttagatagaaa 22038985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 22558603 - 22558648
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||||| |||| |||||||||  |||||||||||||||||    
T  22558603 aaagaaaaaacttgatagatgtgaaaaccacttatttagattgaaa 22558648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 26633810 - 26633855
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||||| |||| |||||||||  |||||||||||||||||    
T  26633810 aaagaaaaaacttgatagatgtgaaaaccacttatttagattgaaa 26633855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 27651925 - 27651872
Alignment:
Q  18 gaaatcacaaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||| ||  ||||||| ||| ||||||||||| |||||||||||||||||    
T  27651925 gaaatcacgaaagaaaaacttgatgtatgtgaaaatcacttatttagattgaaa 27651872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 29961064 - 29961109
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||| ||||||| |||| |||||||||| |||||||||||||||||    
T  29961064 aaaggaaaaacttgatagatgtgaaaatcacttatttagattgaaa 29961109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 33921021 - 33920984
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttattta 63  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  33921021 aaagaaaaaacttgatatatgtgaaaatcacttattta 33920984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 378 - 435
Target Start/End: Complemental strand, 39055309 - 39055252
Alignment:
Q  378 gtacacataacttatttataattttttaataataatacataataagtactcaatccct 435  Q
    |||||||| ||| |||||||||||||||||| || ||| ||||||||| | |||||||    
T  39055309 gtacacatcactcatttataattttttaatattagtacctaataagtattaaatccct 39055252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 374 - 435
Target Start/End: Original strand, 42426863 - 42426924
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataataatacataataagtactcaatccct 435  Q
    |||||||||| | |||||||||||||||||||||| || ||  ||||||  |||||||||||    
T  42426863 acgtgtacacgttacttatttataattttttaatagtagtatctaataaaaactcaatccct 42426924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 43095596 - 43095555
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||| ||||||||||||||  |||||||||||||||||    
T  43095596 aaaaaactcgatatatgtgaaaaccacttatttagattgaaa 43095555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 47158197 - 47158152
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||||| |||||||||| |||| ||||||||| |||||||    
T  47158197 aaagaaaaaacttgatatatgtggaaatcacttatttaaattgaaa 47158152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 114; Significance: 2e-57; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 18 - 187
Target Start/End: Original strand, 17237377 - 17237549
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||    
T  17237377 gaaatcacaaagaaaaaacctagatctatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagaggggtgatttcatgtcaagaattga 17237476  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggcttaacttt 187  Q
    |||||||| || |||| ||||||||||||||| ||||||| |  ||||||||||||||||||| |||||||||    
T  17237477 cccaaaaccacccctcaatggaaaatctagaaaagaaaacatagagagagaaaactagggccgacttaacttt 17237549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 23947410 - 23947576
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||| ||||||||||| ||||| ||||||||||| ||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  23947410 gaaatcaaaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaacgatgaagatgggtgatttcaggtcaagaattga 23947509  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggctt 181  Q
    |||||||| || |||| ||| | || |||||||| ||||| |  |||||||||||||||| ||||||    
T  23947510 cccaaaaccacccctcaatgaagaaactagaagaaaaaacctagagagagaaaactagggtcggctt 23947576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 33109818 - 33109652
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||| ||||||    
T  33109818 gaaatcacaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatggacgattttaggtcaaaaattga 33109719  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggctt 181  Q
    |||||||| || | || ||| | || || ||||||||||| |  | |||||||||||||||||||||    
T  33109718 cccaaaaccacccgtcaatgaagaaactggaagagaaaacctaaaaagagaaaactagggccggctt 33109652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 25064221 - 25064053
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||| ||||||||||||   |||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||  | |||||||||||||||||||    
T  25064221 gaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcaggtcaagaatt 25064122  T
Q  115 gacccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggctt 181  Q
    |||||||||| || |||| ||| | ||  |  |||||||||| |  |||||||||||||||||||||||    
T  25064121 gacccaaaaccacccctcaatgaagaaattgtaagagaaaacctagagagagaaaactagggccggctt 25064053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 12652911 - 12652762
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaacaactc 129  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||| || |    
T  12652911 aaaaatctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaaaccaccc 12652812  T
Q  130 ctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccg 177  Q
    ||| ||| | || ||   ||||||||| |  |||||||||||||||||||    
T  12652811 ctcaatgaagaaactgtgagagaaaacctagagagagaaaactagggccg 12652762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 30 - 165
Target Start/End: Complemental strand, 8496936 - 8496801
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaacaactc 129  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||| |||||| || |    
T  8496936 aaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagaattgactcaaaaccaccc 8496837  T
Q  130 ctcgatggaaaatctagaagagaaaacttagagaga 165  Q
    ||| ||| | ||  |  |||||||||| ||||||||    
T  8496836 ctcaatgaagaaattgtaagagaaaacctagagaga 8496801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 40 - 165
Target Start/End: Original strand, 4984694 - 4984818
Alignment:
Q  40 atatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaacaactcctcgatggaa 139  Q
    |||||||||||||| ||||||||||||||||||| |||||||| ||||||||||  ||||||||||||||||||||||||||||| || |||| |||||     
T  4984694 atatatgtgaaaatcacttatttagattgaaatagagagaaaa-gatgaagatgagtgatttcaggtcaagaattgacccaaaaccacccctcaatggag 4984792  T
Q  140 aatctagaagagaaaacttagagaga 165  Q
    || ||  |||||||||| || |||||    
T  4984793 aaactgtaagagaaaacctaaagaga 4984818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 33740670 - 33740778
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||||  ||| || ||||||||||| ||||||||||||||||||| ||||||||||||||||| || |||||| |||||||||||||    
T  33740670 gaaatcacaaagaaaaaaacctaaatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagaggggtgattttaggtcaagaattg 33740769  T
Q  116 acccaaaac 124  Q
    ||| |||||    
T  33740770 accaaaaac 33740778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 4468543 - 4468437
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||||||||||||||| ||||| ||| ||||||| ||||||||||||||||||| |||||| |||||||||| || ||| |||| ||||||||||||    
T  4468543 gaaatcacaaagaaaaaacctagatctatatgaaaatcacttatttagattgaaatagagagaacaagatgaagaggggtgacttcatgtcaagaattga 4468444  T
Q  117 cccaaaa 123  Q
    |||||||    
T  4468443 cccaaaa 4468437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 7876151 - 7876245
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaac 124  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||| ||||||| |||||| |||||||    
T  7876151 aaaaatctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatgggtgattttaggtcaataattgatccaaaac 7876245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 8196499 - 8196607
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||||  |||||| ||||||||||| ||||||||||||||||||| ||||||||||||||| | || |||||| |||||||||| ||    
T  8196499 gaaatcacaaagaaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaatacgggtgattttaggtcaagaactg 8196598  T
Q  116 acccaaaac 124  Q
    | |||||||    
T  8196599 atccaaaac 8196607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 10228664 - 10228556
Alignment:
Q  18 gaaatcacaaagaaaaaac--tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||||   ||||||||||| ||| | |||||||||||||||| || ||||| ||||||||||| || ||||||||||||||||||||    
T  10228664 gaaatcacaaagaaaaaaacatagatatatgtaaaagtcacttatttagattgaagtagagagagaaagatgaagaggggtgatttcaggtcaagaattg 10228565  T
Q  116 acccaaaac 124  Q
    |||||||||    
T  10228564 acccaaaac 10228556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 4088431 - 4088336
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaaga-tgaagatggatgatttcaggtcaagaattgacccaaaac 124  Q
    |||||||||||| ||||||||||| |||||||||||||| |||| ||| ||||| | ||||||||| |||||||||||||||||||||||||||||    
T  4088431 aaaaaactagatctatgtgaaaatcacttatttagattgtaatagagataaaaaaaatgaagatgggtgatttcaggtcaagaattgacccaaaac 4088336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 23 - 165
Target Start/End: Complemental strand, 12165820 - 12165677
Alignment:
Q  23 cacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaa 121  Q
    |||||||||||||| || || ||||||||||| |||||||||||||||||||   | ||||||||||||| |  |||||||||||||| |||||||||||    
T  12165820 cacaaagaaaaaacctaaatctatgtgaaaatcacttatttagattgaaataggcataaaaagatgaagaggagtgatttcaggtcaataattgacccaa 12165721  T
Q  122 aacaactcctcgatggaaaatctagaagagaaaacttagagaga 165  Q
    || |||||||| ||| | || || |||||||||||  |||||||    
T  12165720 aataactcctcaatgaagaaactggaagagaaaaccgagagaga 12165677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 16419143 - 16419035
Alignment:
Q  18 gaaatcacaaagaaaaaacta--gatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||||  |  ||| ||||||||| | ||||||||||||||||||| |||||||||||||||||||| |||||| |||| ||||||||    
T  16419143 gaaatcacaaagaaaaaaacaaagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagatgggtgattttaggttaagaattg 16419044  T
Q  116 acccaaaac 124  Q
    || ||||||    
T  16419043 actcaaaac 16419035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 18 - 168
Target Start/End: Original strand, 33543712 - 33543864
Alignment:
Q  18 gaaatcacaaagaaaaaactagatatatgtgaaaa-taacttatttagattgaaatatagagaaaaagatg-aagatggatgatttcaggtcaagaattg 115  Q
    |||||||| ||||||||  || || |||||||||| | ||||||||||||||||||||||||||||||||| ||||||  |||||||||||||| || ||    
T  33543712 gaaatcacgaagaaaaacttaaatctatgtgaaaaattacttatttagattgaaatatagagaaaaagatgaaagatgagtgatttcaggtcaaaaactg 33543811  T
Q  116 acccaaaacaactcctcgatggaaaatctagaagagaaaacttagagagaaaa 168  Q
    || |||||| || |||| | | | || ||||||||||||| ||| ||||||||    
T  33543812 actcaaaaccacccctcaacgaagaaactagaagagaaaatttaaagagaaaa 33543864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 7881209 - 7881303
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaac 124  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||  | |||||||| ||||| |||||| |||||||    
T  7881209 aaaaatctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaaaggtgatttcaagtcaataattgatccaaaac 7881303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 37 - 124
Target Start/End: Complemental strand, 17334739 - 17334652
Alignment:
Q  37 tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaac 124  Q
    ||||| ||||||||||| ||||||||||||||||||| | |||||||||||||||| | ||||||||| |||||||| || |||||||    
T  17334739 tagatctatgtgaaaatcacttatttagattgaaataaacagaaaaagatgaagattggtgatttcagatcaagaatcgatccaaaac 17334652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 8028210 - 8028317
Alignment:
Q  18 gaaatcacaaagaaaaaac--tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||| ||||||||||   ||||| ||||||||||| ||||||||||||||||| | ||||||||||||||||  || ||||| ||| |||| |||||    
T  8028210 gaaatcataaagaaaaaaacttagatctatgtgaaaatcacttatttagattgaaacagagagaaaaagatgaagtggggtgattccagatcaataattg 8028309  T
Q  116 acccaaaa 123  Q
    ||||||||    
T  8028310 acccaaaa 8028317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 1933837 - 1933882
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||    
T  1933837 aaagaaaaaacttgatatatgtgaaaataacttatttagatcgaaa 1933882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 374 - 435
Target Start/End: Original strand, 7693895 - 7693956
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataataatacataataagtactcaatccct 435  Q
    |||| ||||||| ||| ||||||||||||||| ||||| ||| |||||||||||||||||||    
T  7693895 acgtatacacatcactcatttataattttttagtaatagtacctaataagtactcaatccct 7693956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 374 - 460
Target Start/End: Complemental strand, 3543351 - 3543265
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataataatacataataagtactcaatccctgcaattcaacatctaacataaattt 460  Q
    |||||||||||| ||| |||||||| ||||||||| || ||  ||| ||||||| ||||||| ||||||| ||||| ||| ||||||    
T  3543351 acgtgtacacattactcatttataaatttttaatagtattatctaacaagtacttaatccctccaattcagcatctcacacaaattt 3543265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 363 - 433
Target Start/End: Original strand, 3705681 - 3705751
Alignment:
Q  363 aaatagattttacgtgtacacataacttatttataattttttaataataatacataataagtactcaatcc 433  Q
    |||||||||| ||| |||||||| ||||||||  |||||||||||| || ||| ||||||||| |||||||    
T  3705681 aaatagatttcacgcgtacacatcacttatttggaattttttaatagtagtacctaataagtattcaatcc 3705751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 345 - 431
Target Start/End: Original strand, 24072489 - 24072575
Alignment:
Q  345 atttatttttggatacccaaatagattttacgtgtacacataacttatttataattttttaataataatacataataagtactcaat 431  Q
    |||||||||||| |||  || | ||| ||| |||||||||| | || ||||||||||||||||| |||||| ||||||||| |||||    
T  24072489 atttatttttgggtacttaagtggatcttatgtgtacacatcatttctttataattttttaatattaatacctaataagtattcaat 24072575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 25398536 - 25398451
Alignment:
Q  31 aaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    |||| |||||| || || ||||| ||||||||||||||| | | ||| ||||||||||||||| | |||||| |||||| ||||||    
T  25398536 aaaacctagatctacgttaaaatcacttatttagattgagacaaagataaaaagatgaagatgaacgatttcgggtcaaaaattga 25398451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 37 - 84
Target Start/End: Original strand, 9508829 - 9508876
Alignment:
Q  37 tagatatatgtgaaaataacttatttagattgaaatatagagaaaaag 84  Q
    ||||||||||||||||| |||||||||||||||| || | ||||||||    
T  9508829 tagatatatgtgaaaatcacttatttagattgaattaaaaagaaaaag 9508876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 34489235 - 34489133
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaa-taacttatttagat--tgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaat 113  Q
    |||||||| |||||||||| ||||| |||||||||| | ||||||||| ||  |||| || ||||||||||||||||| || |||||| | ||||| |||    
T  34489235 gaaatcacgaagaaaaaacctagatctatgtgaaaaatcacttatttatatattgaattagagagaaaaagatgaagaggggtgattttaagtcaaaaat 34489136  T
Q  114 tga 116  Q
    |||    
T  34489135 tga 34489133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 384 - 449
Target Start/End: Original strand, 1946957 - 1947022
Alignment:
Q  384 ataacttatttataa-ttttttaataataatacataataagtactcaatccctgcaattcaacatct 449  Q
    ||||||||||||||| ||||||||||||||||| ||||||| ||||||| ||| ||| ||| |||||    
T  1946957 ataacttatttataatttttttaataataatac-taataagcactcaattccttcaactcatcatct 1947022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 5582765 - 5582819
Alignment:
Q  37 tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaaga 91  Q
    ||||| ||| ||||||| | ||||||||||| ||||||| |||||||||||||||    
T  5582765 tagatctatttgaaaatcatttatttagattaaaatataaagaaaaagatgaaga 5582819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 49 - 91
Target Start/End: Complemental strand, 8266587 - 8266545
Alignment:
Q  49 aaaataacttatttagattgaaatatagagaaaaagatgaaga 91  Q
    ||||| |||||||||||||||| || |||||||||||||||||    
T  8266587 aaaatcacttatttagattgaagtagagagaaaaagatgaaga 8266545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 83
Target Start/End: Complemental strand, 13436751 - 13436705
Alignment:
Q  37 tagatatatgtgaaaataacttatttagattgaaatatagagaaaaa 83  Q
    ||||| ||||||||||| ||||||||| ||||||||| |||||||||    
T  13436751 tagatttatgtgaaaatcacttatttaaattgaaatagagagaaaaa 13436705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 35001575 - 35001506
Alignment:
Q  18 gaaatcacaaagaaaaaac--tagatatatgtgaaaataacttatttagattgaaatatagagaaaaaga 85  Q
    ||||||||||||||||||   ||||| ||||| ||| | ||||||||||||| ||||| |||||||||||    
T  35001575 gaaatcacaaagaaaaaaacatagatctatgtaaaagtcacttatttagattaaaatagagagaaaaaga 35001506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 377 - 414
Target Start/End: Original strand, 1624193 - 1624230
Alignment:
Q  377 tgtacacataacttatttataattttttaataataata 414  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  1624193 tgtacacataatttaattataattttttaataataata 1624230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 3913713 - 3913758
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||||| |||| |||||||||  |||||||||||||||||    
T  3913713 aaagaaaaaacttgatagatgtgaaaaccacttatttagattgaaa 3913758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 4352106 - 4352183
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatag-agaaaaagatgaagatggatgatttcaggt 106  Q
    ||||||||| || ||| ||||||| |||||||| |||||||||  |  ||||||| |||||||||| |||||||||||    
T  4352106 aaaaaactaaatctatatgaaaatcacttatttggattgaaattgactagaaaaatatgaagatgggtgatttcaggt 4352183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 11321608 - 11321653
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    ||||||||||||  |||||||||||||  |||||||||||||||||    
T  11321608 aaagaaaaaacttaatatatgtgaaaaccacttatttagattgaaa 11321653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 14801153 - 14801112
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||| ||| ||||||||||| |||||||||||||||||    
T  14801153 aaaaaacttgatgtatgtgaaaattacttatttagattgaaa 14801112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 25337555 - 25337499
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaat 72  Q
    |||||||| |||||||||  |||||| ||||||||||| | ||||||||||||||||    
T  25337555 gaaatcacgaagaaaaaaacctagatttatgtgaaaatcatttatttagattgaaat 25337499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 34018511 - 34018466
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||||| ||||||||||||||  ||||||||| |||||||    
T  34018511 aaagaaaaaacttgatatatgtgaaaaccacttatttaaattgaaa 34018466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 3e-56; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 14545508 - 14545342
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  14545508 gaaatcacaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatatagagaaaaagatgaagatgagtgatttcaggtcaagaattga 14545409  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggctt 181  Q
    | |||||| ||  ||||||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  14545408 cacaaaaccaccgctcgatggaaaatctagaagagaaaacctagagagagaaaactagggccggctt 14545342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 30818438 - 30818603
Alignment:
Q  18 gaaatcacaaagaaaa-aactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||||||| |||| |||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||    
T  30818438 gaaatcacaaaaaaaaaaactagatttatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagatgggtgatttcaggtcaataattga 30818537  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaacttagagaga-aaactagggccggctt 181  Q
    |||||||| || |||| ||| | || ||  || |||||||||||||||| | ||||||||||||||    
T  30818538 cccaaaactacccctcaatgaagaaactgtaaaagaaaacttagagagagagactagggccggctt 30818603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 28035128 - 28035020
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||||  |||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||  |||||||||||||| |||||    
T  28035128 gaaatcacaaagaaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagatgagtgatttcaggtcaataattg 28035029  T
Q  116 acccaaaac 124  Q
    |||||||||    
T  28035028 acccaaaac 28035020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 18 - 165
Target Start/End: Complemental strand, 51871852 - 51871705
Alignment:
Q  18 gaaatcacaaagaaaaaa-ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    |||||||||||||||||| |||||| ||||||||| | ||||||||||||||||||| ||||||||||||||||| || |||||| ||||||||||||||    
T  51871852 gaaatcacaaagaaaaaagctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtgattttaggtcaagaattga 51871753  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaacttagagaga 165  Q
    |||||||| || || | ||| | || | |||||||||||| ||||||||    
T  51871752 cccaaaaccac-ccccaatgaagaaacgagaagagaaaacctagagaga 51871705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 31 - 181
Target Start/End: Original strand, 18569417 - 18569567
Alignment:
Q  31 aaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaacaactcc 130  Q
    |||| |||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||  | |||||||  ||||| |||||||||||||| || ||    
T  18569417 aaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagacaggtgatttcttgtcaaaaattgacccaaaaccacccc 18569516  T
Q  131 tcgatggaaaatctagaagagaaaacttagagagaaaactagggccggctt 181  Q
    || ||| | || || ||||||||||| ||||||||||| |||| |||||||    
T  18569517 tcaatgaagaaactggaagagaaaacctagagagaaaattaggaccggctt 18569567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 20266291 - 20266183
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||| ||||||||||||  |||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||| || ||||||||||    
T  20266291 gaaattacaaagaaaaaaagctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatgggtgattttagatcaagaattg 20266192  T
Q  116 acccaaaac 124  Q
    |||||||||    
T  20266191 acccaaaac 20266183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 50272232 - 50272340
Alignment:
Q  18 gaaatcacaaagaaaaaac--tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||||   ||||| ||||||||||| ||||||||||||||||||| ||||||||||||||| | || ||||||||||||||||||||    
T  50272232 gaaatcacaaagaaaaaaacttagatctatgtgaaaattacttatttagattgaaataaagagaaaaagatgaataggggtgatttcaggtcaagaattg 50272331  T
Q  116 acccaaaac 124  Q
    |||||||||    
T  50272332 acccaaaac 50272340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 51868737 - 51868845
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||||  |||||| ||||||||| | ||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||     
T  51868737 gaaatcacaaagaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtcaagaatta 51868836  T
Q  116 acccaaaac 124  Q
    |||||||||    
T  51868837 acccaaaac 51868845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 25406376 - 25406483
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||||  |||||| ||||||||| | ||||||||||||||||||| ||||||||||||||||| |  ||||||||||||||||||||    
T  25406376 gaaatcacaaagaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggtgtgatttcaggtcaagaattg 25406475  T
Q  116 acccaaaa 123  Q
    ||||||||    
T  25406476 acccaaaa 25406483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 40646678 - 40646510
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||| ||||||||||||   |||||| || |||||||| ||||||||||||||||||| | |||||||||||||||||  |||||| ||||||||||||    
T  40646678 gaaattacaaagaaaaaaaacctagatctacgtgaaaatcacttatttagattgaaataaatagaaaaagatgaagatgagtgattttaggtcaagaatt 40646579  T
Q  115 gacccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggctt 181  Q
    |||||||||| || |||| ||| | ||  |  |||||||||| |  |||||||||||||||||||||||    
T  40646578 gacccaaaaccacccctcaatgaagaaattgtaagagaaaacctagagagagaaaactagggccggctt 40646510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 25728065 - 25728159
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaac 124  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||||||||||||    
T  25728065 aaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggagtgatttcaggtcaagaattgacccaaaac 25728159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 20 - 124
Target Start/End: Complemental strand, 27872725 - 27872620
Alignment:
Q  20 aatcacaaagaaaaaact-agatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacc 118  Q
    |||||| ||||||||||| |||| ||||||||||| ||||||||||||||||||| || ||||||||||||||||| |||||||| ||||| ||||||||    
T  27872725 aatcacgaagaaaaaacttagatctatgtgaaaatcacttatttagattgaaatagagcgaaaaagatgaagatgggtgatttcatgtcaaaaattgacc 27872626  T
Q  119 caaaac 124  Q
    ||||||    
T  27872625 caaaac 27872620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 35584727 - 35584820
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaa 123  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||  ||||||||||| ||||||||||||||||    
T  35584727 aaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatgagtgatttcaggttaagaattgacccaaaa 35584820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 30 - 179
Target Start/End: Complemental strand, 50148347 - 50148196
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaacaactc 129  Q
    ||||| |||||| ||||||||||| ||||||||||||| ||||| |||||||| ||||||||||||||||||||| || |||||||||||||||| || |    
T  50148347 aaaaacctagatctatgtgaaaatcacttatttagattaaaataaagagaaaaggatgaagatggatgatttcagatctagaattgacccaaaaccaccc 50148248  T
Q  130 ctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggc 179  Q
    ||| ||| | ||  || |||||||||  |  |||||||||||||||| ||||    
T  50148247 ctcaatgaagaaattataagagaaaatctagagagagaaaactagggtcggc 50148196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 30 - 182
Target Start/End: Complemental strand, 5701232 - 5701078
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaacaactc 129  Q
    ||||| |||||| ||||||||||| ||||||||| ||||||||| ||||||||||||||||| || ||||||||||||||| |||||||||||   || |    
T  5701232 aaaaacctagatctatgtgaaaatcacttatttaaattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagtattgacccaaagtcaccc 5701133  T
Q  130 ctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggctta 182  Q
    ||| ||  | ||  |  ||||||||||||  ||||||||||||||||||||||||    
T  5701132 ctcaataaagaaattgtaagagaaaacttagagagagaaaactagggccggctta 5701078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 33291510 - 33291674
Alignment:
Q  18 gaaatcacaaagaaaaaac--tagatatatgtgaaaataacttatttagattgaaatatagagaaaaaga-tgaagatggatgatttcaggtcaagaatt 114  Q
    ||||||||||||||||||   ||||| ||||||||||| ||||||||| ||||||||| | ||||||| | |||||| || |||||||||||||||||||    
T  33291510 gaaatcacaaagaaaaaaacatagatttatgtgaaaatcacttatttatattgaaatagaaagaaaaaaaatgaagaggggtgatttcaggtcaagaatt 33291609  T
Q  115 gacccaaaacaactcctcgatggaaaatctagaagagaaaacttagag--agaaaactagggccg 177  Q
    |||||||||| || |||| ||| |||| ||| |||| ||||  |||||  |||||||||||||||    
T  33291610 gacccaaaaccacccctcaatgaaaaaactataagaaaaaatctagagaaagaaaactagggccg 33291674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 9172472 - 9172369
Alignment:
Q  23 cacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgaccca 120  Q
    |||||||||||||  |||||| ||||||||| | ||||||||||||||||||| ||| ||||| ||||||| || |||||||||||||||||||||||||    
T  9172472 cacaaagaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagaaaaaaatatgaagaggggtgatttcaggtcaagaattgaccca 9172373  T
Q  121 aaac 124  Q
    ||||    
T  9172372 aaac 9172369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 9180454 - 9180351
Alignment:
Q  23 cacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgaccca 120  Q
    |||||||||||||  |||||| ||||||||| | ||||||||||||||||||| ||| ||||| ||||||| || |||||||||||||||||||||||||    
T  9180454 cacaaagaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagaaaaaaatatgaagaggggtgatttcaggtcaagaattgaccca 9180355  T
Q  121 aaac 124  Q
    ||||    
T  9180354 aaac 9180351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 38520626 - 38520733
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    |||||||| |||||||||| ||||| ||||||||||| |||||||||||| |||||| |||||||||||||||||||  ||||||||||| || ||||||    
T  38520626 gaaatcacgaagaaaaaacatagatctatgtgaaaatcacttatttagatcgaaatagagagaaaaagatgaagatgagtgatttcaggtaaaaaattga 38520725  T
Q  117 cccaaaac 124  Q
     |||||||    
T  38520726 tccaaaac 38520733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 5324650 - 5324756
Alignment:
Q  18 gaaatcacaaagaaaaaact-agatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    |||||||||||| ||||||| | || || |||||||| ||||||||||||||||||| |||||||||||||||||  | ||||| |||||||||||||||    
T  5324650 gaaatcacaaaggaaaaacttaaatttacgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagagaggtgattccaggtcaagaattga 5324749  T
Q  117 cccaaaa 123  Q
    |||||||    
T  5324750 cccaaaa 5324756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 19716003 - 19716096
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaac 124  Q
    ||||| ||| || ||||||||||| ||||||||||||||||||| ||||||||||||||||| || ||||||||| |||||||||||||||||||    
T  19716003 aaaaacctaaatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaaga-gggtgatttcagatcaagaattgacccaaaac 19716096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 40881119 - 40881213
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaac 124  Q
    ||||| |||||| || |||||||| ||| ||||||||||||||| |||||||||||||||||||  |||||| ||||||||||||||||||||||    
T  40881119 aaaaacctagatctaagtgaaaatcactcatttagattgaaatagagagaaaaagatgaagatgagtgattttaggtcaagaattgacccaaaac 40881213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 37 - 124
Target Start/End: Complemental strand, 30879043 - 30878956
Alignment:
Q  37 tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaac 124  Q
    ||||| ||||||||||| ||||||||||||| ||||| |||||||||||||||||  |||||| ||||||||| ||||||||||||||    
T  30879043 tagatctatgtgaaaatcacttatttagattaaaataaagagaaaaagatgaagagagatgatctcaggtcaaaaattgacccaaaac 30878956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 7997762 - 7997668
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaac 124  Q
    ||||| |||||| ||||||||||| ||||||||| ||||||||| ||||||||||||||||| || ||||||||| |||| |||| |||||||||    
T  7997762 aaaaacctagatctatgtgaaaatcacttatttatattgaaataaagagaaaaagatgaagaagggtgatttcagatcaaaaattaacccaaaac 7997668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 3871397 - 3871289
Alignment:
Q  18 gaaatcacaaagaaaaaact-agatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaaga-tggatgatttcaggtcaagaattg 115  Q
    |||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||  ||||| ||||||||| |  || ||||||||| |||||||||     
T  3871397 gaaatcacaaagaaaaaacttagatctatgtgaaaatcacttatttagattgaaattgagagagaaagatgaaaagggggtgatttcagatcaagaatta 3871298  T
Q  116 acccaaaac 124  Q
    |||||||||    
T  3871297 acccaaaac 3871289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 37 - 168
Target Start/End: Original strand, 45426175 - 45426307
Alignment:
Q  37 tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaa-caactcctcgat 135  Q
    ||||| ||||||||||| ||||||||||||| ||||| ||||||||||||||| || | ||||||||  |||||||||||||||||| || | |||| ||    
T  45426175 tagatctatgtgaaaatcacttatttagatttaaatagagagaaaaagatgaaaataggtgatttcaaatcaagaattgacccaaaaccaccccctcaat 45426274  T
Q  136 ggaaaatctagaagagaaaacttagagagaaaa 168  Q
    | | || || ||| ||||||| |||||||||||    
T  45426275 gaagaaactggaaaagaaaacctagagagaaaa 45426307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 7342711 - 7342543
Alignment:
Q  18 gaaatcacaaagaaaaaac--tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||||   ||||| || || ||| | ||||||||||||||||||| | | ||||| ||||||| || |||||||||||||| |||||    
T  7342711 gaaatcacaaagaaaaaaacatagatctacgtaaaagtcacttatttagattgaaatagataaaaaaatatgaagaggggtgatttcaggtcaaaaattg 7342612  T
Q  116 acccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggctta 182  Q
    ||||||||| || || | ||| | || |  ||||||||||| |  |||||||||| |||||||||||||    
T  7342611 acccaaaaccaccccccaatgaagaaacgggaagagaaaacctagagagagaaaattagggccggctta 7342543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 18 - 168
Target Start/End: Complemental strand, 19723322 - 19723171
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagag-aaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||||||||||||||||  |||||| ||||||||||| |||||||||||||| |||| |||| ||||| |||||||  | |||||||| ||||| ||||    
T  19723322 gaaatcacaaagaaaaaaacctagatctatgtgaaaatcacttatttagattg-aatagagagaaaaaatatgaagagaggtgatttcaagtcaataatt 19723224  T
Q  115 gacccaaaacaactcctcgatggaaaatctagaagagaaaacttagagagaaaa 168  Q
    |||||||||| || |||| ||| | || ||| |||||||||| |||||| ||||    
T  19723223 gacccaaaaccac-cctcaatgaagaaactataagagaaaacctagagaaaaaa 19723171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 18 - 168
Target Start/End: Complemental strand, 39987378 - 39987222
Alignment:
Q  18 gaaatcacaaagaaaaaactagatatatgtgaaaa-taacttatttagattgaaatatagagaaaaagatgaagatggatga------tttcaggtcaag 110  Q
    |||||||| ||||||||||||||| ||| |||||| | ||||||||||||||||  | |||||||||||||||||  | |||      ||||| |||||     
T  39987378 gaaatcacgaagaaaaaactagatctatatgaaaaatcacttatttagattgaatcagagagaaaaagatgaagagaggtgatttcattttcatgtcaaa 39987279  T
Q  111 aattgacccaaaacaactcctcgatggaaaatctagaagagaaaacttagagagaaaa 168  Q
    |||||||||||||| |||| || || ||||| ||| ||||||||||||||||||||||    
T  39987278 aattgacccaaaaccactcttcaat-gaaaaactaaaagagaaaacttagagagaaaa 39987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 37 - 124
Target Start/End: Original strand, 45805922 - 45806009
Alignment:
Q  37 tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaac 124  Q
    ||||| ||||||||| | ||||||||||||||||||| ||||||||||| |||||  | ||||||||| |||| ||||||||||||||    
T  45805922 tagatttatgtgaaagtcacttatttagattgaaatagagagaaaaagaggaagaaaggtgatttcagatcaaaaattgacccaaaac 45806009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 50166191 - 50166299
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||| ||||||||  ||| || ||||||||| | ||||||||||||||||||| | |||||||||| |||| ||   |||||||||||| |||||    
T  50166191 gaaatcacatagaaaaaaacctaaatctatgtgaaattcacttatttagattgaaatagatagaaaaagataaagaggggcaatttcaggtcaataattg 50166290  T
Q  116 acccaaaac 124  Q
    |||||||||    
T  50166291 acccaaaac 50166299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 9919378 - 9919303
Alignment:
Q  18 gaaatcacaaagaaaaaac--tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaaga 91  Q
    ||||||||||||||||||   ||||| ||||| ||||| ||||||||||||||||||| |||||||||||||||||    
T  9919378 gaaatcacaaagaaaaaaacatagatctatgtaaaaatcacttatttagattgaaatagagagaaaaagatgaaga 9919303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 11453924 - 11453822
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaat--atagagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||||||||||||||||| ||||| ||||||||||  ||||||||||||||||||  | ||||||||||||||||| |  |||||||| ||||| ||||    
T  11453924 gaaatcacaaagaaaaaacctagatctatgtgaaaaccacttatttagattgaaatagagagagaaaaagatgaaga-gagtgatttcaagtcaaaaatt 11453826  T
Q  115 gacc 118  Q
    ||||    
T  11453825 gacc 11453822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 34519121 - 34519054
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaag 84  Q
    ||||||| ||||||||||| ||||| ||||||||||| ||||||||||||||||||| ||||||||||    
T  34519121 gaaatcaaaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaag 34519054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 44637410 - 44637303
Alignment:
Q  18 gaaatcacaaagaaaaaact-agatatatgtgaaaataacttatttagattgaaatataga-gaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    |||||||||||||| ||||| |||| || |||||||| ||||||||||||||||||| |||  |||||||||||||  | |||||| | ||||| |||||    
T  44637410 gaaatcacaaagaagaaacttagatctacgtgaaaatcacttatttagattgaaataaagataaaaaagatgaagagaggtgattttatgtcaa-aattg 44637312  T
Q  116 acccaaaac 124  Q
    |||||||||    
T  44637311 acccaaaac 44637303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 7312191 - 7312298
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    |||||||| |||||||||| ||||| || |||||||| | |||||||  |||||||| |||||||||||||||||    | |||| ||||||| ||||||    
T  7312191 gaaatcacgaagaaaaaacctagatctacgtgaaaatcatttatttaatttgaaatagagagaaaaagatgaagagaagtaattttaggtcaaaaattga 7312290  T
Q  117 cccaaaac 124  Q
    ||||||||    
T  7312291 cccaaaac 7312298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 19052426 - 19052532
Alignment:
Q  18 gaaatcacaaagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgac 117  Q
    ||||||||| |||||||||||||| | | | || || ||||||||||| ||||| | |||  |||| |||||||| ||||||||| |||||| |||| ||    
T  19052426 gaaatcacacagaaaaaactagatctttttaaatatcacttatttagactgaaagagagaacaaaatatgaagattgatgatttcgggtcaaaaatttac 19052525  T
Q  118 ccaaaac 124  Q
    |||||||    
T  19052526 ccaaaac 19052532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 18649977 - 18650062
Alignment:
Q  19 aaatcacaaagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcag 104  Q
    ||||||| || ||||| ||| || ||||||||||| |||||||||||| |||||| |||| ||||||| ||| || ||||||||||    
T  18649977 aaatcacgaaaaaaaacctatatttatgtgaaaattacttatttagatcgaaatagagaggaaaagataaagctgcatgatttcag 18650062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 15492243 - 15492160
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaa 109  Q
    |||||||||||| ||||||||||||||| | ||||||||||||||| | |  |||||||||| | |  |||||||| |||||||    
T  15492243 aaagaaaaaacttgatatatgtgaaaatcatttatttagattgaaagaaatggaaaaagatgcaaaatgatgattttaggtcaa 15492160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 119
Target Start/End: Original strand, 41081809 - 41081899
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatag-agaaaaagatgaagatggatgatttcaggtcaagaattgaccc 119  Q
    ||||| |||||| |||| | |||| |||||| |||||||||||  |  |||||||||||||||||  |||||||||||||| |||||||||    
T  41081809 aaaaacctagatctatgcgcaaatcacttatatagattgaaatggactagaaaaagatgaagatgagtgatttcaggtcaaaaattgaccc 41081899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 1742233 - 1742188
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||    
T  1742233 aaagaaaaaacttgatatatgtgaaaaccacttatttagattgaaa 1742188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 377 - 458
Target Start/End: Original strand, 14775141 - 14775222
Alignment:
Q  377 tgtacacataacttatttataattttttaataataatacataataagtactcaatccctgcaattcaacatctaacataaat 458  Q
    |||||| ||||||||||||||||||| ||||| || ||  |||||| ||||||||||||  ||||||| |||| ||| ||||    
T  14775141 tgtacatataacttatttataattttctaatagtagtaactaataaatactcaatccctcaaattcaatatcttacacaaat 14775222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 23291782 - 23291827
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||    
T  23291782 aaagaaaaaacttgatatatgtgaaaaccacttatttagattgaaa 23291827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 101
Target Start/End: Complemental strand, 31918942 - 31918864
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattga---aatatagagaaaaagatgaagatggatgattt 101  Q
    |||||||||||| ||||||||||||||  |||||||||||||||   || | ||  ||||||||| |||||||||||||    
T  31918942 aaagaaaaaacttgatatatgtgaaaaccacttatttagattgatagaaaagaggaaaaaagatgcagatggatgattt 31918864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 334 - 435
Target Start/End: Complemental strand, 35988411 - 35988308
Alignment:
Q  334 acaatggaaaaatttatttttggatacccaaatagattttacgtgtacacataac--ttatttataattttttaataataatacataataagtactcaat 431  Q
    ||||| ||||||| |||||||||||||  |||||||||||   |||| ||| | |  ||||||||||||||||||||||| ||| |||| |  |||||||    
T  35988411 acaattgaaaaatatatttttggatacttaaatagattttttttgtatacaaatcaattatttataattttttaataatattacctaattaacactcaat 35988312  T
Q  432 ccct 435  Q
    ||||    
T  35988311 ccct 35988308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 48365887 - 48365951
Alignment:
Q  60 tttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaac 124  Q
    ||||| |||||| | |||||||||||||||||| | ||||||||  |||| ||||||||||||||    
T  48365887 tttagtttgaaacagagagaaaaagatgaagataggtgatttcatttcaaaaattgacccaaaac 48365951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 12635119 - 12635076
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattga 69  Q
    |||||||| ||| ||||||||||||||| |||||||||||||||    
T  12635119 aaagaaaacacttgatatatgtgaaaatcacttatttagattga 12635076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 387 - 422
Target Start/End: Complemental strand, 12981167 - 12981132
Alignment:
Q  387 acttatttataattttttaataataatacataataa 422  Q
    |||| |||||||||||||||||||||||||||||||    
T  12981167 acttgtttataattttttaataataatacataataa 12981132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 15397365 - 15397306
Alignment:
Q  43 tatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttc 102  Q
    ||||||||||| ||||||||| ||| |||||||||||| || | ||| ||||||||||||    
T  15397365 tatgtgaaaatcacttatttatattaaaatatagagaacaaaacgaaaatggatgatttc 15397306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 376 - 435
Target Start/End: Complemental strand, 27544521 - 27544462
Alignment:
Q  376 gtgtacacataacttatttataattttttaataataatacataataagtactcaatccct 435  Q
    |||||||||| ||| |||||||||||||||||||||  |  ||||||| |||||||||||    
T  27544521 gtgtacacatcactcatttataattttttaataatagcatctaataagcactcaatccct 27544462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 392 - 435
Target Start/End: Complemental strand, 46487110 - 46487067
Alignment:
Q  392 tttataattttttaataataatacataataagtactcaatccct 435  Q
    |||||||||||||||||||||||| ||||||  |||||||||||    
T  46487110 tttataattttttaataataatacctaataaacactcaatccct 46487067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 363 - 409
Target Start/End: Original strand, 10472389 - 10472435
Alignment:
Q  363 aaatagattttacgtgtacacataacttatttataattttttaataa 409  Q
    |||||||||| ||||||||| || | |||||||||||||||||||||    
T  10472389 aaatagatttcacgtgtacatatcatttatttataattttttaataa 10472435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 378 - 428
Target Start/End: Complemental strand, 25813883 - 25813833
Alignment:
Q  378 gtacacataacttatttataattttttaataataatacataataagtactc 428  Q
    |||||||| ||| ||||||||||||||||||  | ||||||||||||||||    
T  25813883 gtacacatcactcatttataattttttaatagaagtacataataagtactc 25813833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 374 - 432
Target Start/End: Original strand, 32451731 - 32451789
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataataatacataataagtactcaatc 432  Q
    |||| ||||||| ||| |||||||||||||||||| |||||| ||||||| | ||||||    
T  32451731 acgtttacacatcactaatttataattttttaatagtaatacctaataagcattcaatc 32451789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 374 - 428
Target Start/End: Complemental strand, 44850086 - 44850032
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataataatacataataagtactc 428  Q
    |||||||||||| || | |||||||||||||||||| ||||| ||||||| ||||    
T  44850086 acgtgtacacatcacatttttataattttttaataacaatacctaataagcactc 44850032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 21947757 - 21947802
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||||| |||| |||||||||  |||||||||||||||||    
T  21947757 aaagaaaaaacttgatagatgtgaaaaccacttatttagattgaaa 21947802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 391 - 432
Target Start/End: Complemental strand, 23333894 - 23333853
Alignment:
Q  391 atttataattttttaataataatacataataagtactcaatc 432  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||    
T  23333894 atttataattttttaataatagtacttaataagcactcaatc 23333853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 29738775 - 29738820
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||||| |||| |||||||||  |||||||||||||||||    
T  29738775 aaagaaaaaacttgatagatgtgaaaaccacttatttagattgaaa 29738820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 374 - 411
Target Start/End: Original strand, 35839858 - 35839895
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataata 411  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  35839858 acgtgtacatataactaatttataattttttaataata 35839895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 363 - 408
Target Start/End: Complemental strand, 37073827 - 37073782
Alignment:
Q  363 aaatagattttacgtgtacacataacttatttataattttttaata 408  Q
    ||||| |||||||||||| |||| | ||||||||||||||||||||    
T  37073827 aaataaattttacgtgtatacatcatttatttataattttttaata 37073782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 39888145 - 39888104
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagatt 67  Q
    |||||||||||||||||||||||||||  ||||||| |||||    
T  39888145 aaagaaaaaactagatatatgtgaaaaccacttattaagatt 39888104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 391 - 428
Target Start/End: Original strand, 43383959 - 43383996
Alignment:
Q  391 atttataattttttaataataatacataataagtactc 428  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  43383959 atttataattttttactaaaaatacataataagtactc 43383996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 48750149 - 48750096
Alignment:
Q  18 gaaatcacaaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||| ||  ||||||| ||| ||||||||||| |||||||||||||||||    
T  48750149 gaaatcacgaaagaaaaacttgatgtatgtgaaaatcacttatttagattgaaa 48750096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 374 - 423
Target Start/End: Original strand, 50011436 - 50011485
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataataatacataataag 423  Q
    ||||||||| || ||||||||||||||||||||||| |||| ||| ||||    
T  50011436 acgtgtacatatcacttatttataattttttaataaaaatatatattaag 50011485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 374 - 431
Target Start/End: Original strand, 51504505 - 51504562
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataataatacataataagtactcaat 431  Q
    ||||||| |||| ||| |||||||||||||||||| || ||| || ||||||||||||    
T  51504505 acgtgtatacatcactcatttataattttttaatagtagtacgtattaagtactcaat 51504562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 374 - 435
Target Start/End: Original strand, 52353761 - 52353822
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataataatacataataagtactcaatccct 435  Q
    |||||||||||| ||| ||||||||||||||||||  | ||| ||||||| |||| ||||||    
T  52353761 acgtgtacacatcactaatttataattttttaatagcagtacctaataagcactcgatccct 52353822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 5e-55; HSPs: 72)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 18 - 199
Target Start/End: Complemental strand, 4192827 - 4192643
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||| ||||||||| ||||||    
T  4192827 gaaatcacaaagaaaaaacctaaatatatgtgaaaatcacttatttagattgaaatatagagaaaaagatgaagaggggtgatctcaggtcaaaaattga 4192728  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggcttaactttttatgatatgat 199  Q
     ||||||| || ||||||||||||||||||||| |||||| |  ||||||||||||| || |||||||||||| |||||||||||    
T  4192727 tccaaaaccacacctcgatggaaaatctagaagggaaaacctagagagagaaaactacggtcggcttaactttctatgatatgat 4192643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 21570499 - 21570663
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||||||||| ||||||   |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  21570499 gaaatcacaaaaaaaaaaaatctagatctatgtgaaaatcacttatttagattgaaatatagagaaaaagatgaagaggggtgatttcaggtcaagaatt 21570598  T
Q  115 gacccaaaacaactcctcgatggaaaatctagaagagaaaacttagag--agaaaactagggccg 177  Q
    |||||||||| ||  ||| ||| ||||||| ||||||||||| |||||  |||||||||||||||    
T  21570599 gacccaaaaccaccactcaatgaaaaatctggaagagaaaacctagagacagaaaactagggccg 21570663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 18 - 176
Target Start/End: Complemental strand, 27477143 - 27476982
Alignment:
Q  18 gaaatcacaaagaaaaaa-ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    |||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||| ||||| ||||||    
T  27477143 gaaatcacaaagaaaaaatctagatctatgtgaaaattacttatttagattgaaatatagagaaaaagatgaagaggggtgatttcatgtcaataattga 27477044  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaacttagag--agaaaactagggcc 176  Q
    |||||||| |  |||| || ||||||| |||||| ||||| |||||  ||||||||||||||    
T  27477043 cccaaaaccatccctcaatagaaaatcaagaagaaaaaacctagagacagaaaactagggcc 27476982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 18 - 163
Target Start/End: Complemental strand, 32913230 - 32913084
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||||| |||||||||||||||||| ||| |||| || |||||||||||||||||||||    
T  32913230 gaaatcacaaagaaaaaacctagatctatgtgaaaatcacttatttaaattgaaatatagagaaaaggatcaagaggggtgatttcaggtcaagaattga 32913131  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaacttagaga 163  Q
     ||||||| || |||||||  ||||||||||||||||||| ||||||    
T  32913130 tccaaaaccacccctcgatttaaaatctagaagagaaaacctagaga 32913084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 2808564 - 2808670
Alignment:
Q  18 gaaatcacaaagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgac 117  Q
    ||||||||||||||||| |||||| ||||||||||| ||||||||||| ||||||| ||||||| ||||||||| || ||||||||||||||||||||||    
T  2808564 gaaatcacaaagaaaaacctagatctatgtgaaaatcacttatttagactgaaatagagagaaatagatgaagaggggtgatttcaggtcaagaattgac 2808663  T
Q  118 ccaaaac 124  Q
    |||||||    
T  2808664 ccaaaac 2808670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 45128193 - 45128085
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||||  |||||| ||||||||| | ||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||    
T  45128193 gaaatcacaaagaaaaaaacctagatctatgtgaaagtcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagaattg 45128094  T
Q  116 acccaaaac 124  Q
    |||||||||    
T  45128093 acccaaaac 45128085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 18 - 168
Target Start/End: Original strand, 3270321 - 3270472
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||||||| ||||||| ||||| ||||||||||| ||||||||||||||||||| | ||||||||||||| |||  |||||||||||||||||||||    
T  3270321 gaaatcacaaaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaaaagaaaaagatgaaaatgagtgatttcaggtcaagaattga 3270420  T
Q  117 cccaaaacaactcctcgatgga-aaatctagaagagaaaacttagagagaaaa 168  Q
    |||||||| || |||| ||| | |||||   ||||||||||||||||||||||    
T  3270421 cccaaaaccacccctcaatgaagaaatc-gtaagagaaaacttagagagaaaa 3270472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 8971719 - 8971828
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagag--aaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||||||||| ||||| ||||  ||||||||||||| ||||||||||||||||||||||    
T  8971719 gaaatcacaaagaaaaaacctagatctatgtgaaaatcacttatttagattaaaataaagagagaaaaagatgaagagggatgatttcaggtcaagaatt 8971818  T
Q  115 gacccaaaac 124  Q
    ||||||||||    
T  8971819 gacccaaaac 8971828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 6173621 - 6173513
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||||  |||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||| |    
T  6173621 gaaatcacaaagaaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtcaagaatag 6173522  T
Q  116 acccaaaac 124  Q
    ||| |||||    
T  6173521 accgaaaac 6173513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 27249243 - 27249351
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||| ||||||||||||  |||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||| || ||||||||||||||| ||||    
T  27249243 gaaattacaaagaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagtattg 27249342  T
Q  116 acccaaaac 124  Q
    |||||||||    
T  27249343 acccaaaac 27249351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 40660024 - 40660188
Alignment:
Q  18 gaaatcacaaagaaaaaa-ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    |||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||  |||||||||||||||||||||    
T  40660024 gaaatcacaaagaaaaaatctagatctatgtgaaaatcacttatttagattgaaata--gagaaaaagatgaagatgtgtgatttcaggtcaagaattga 40660121  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggctta 182  Q
    | |||||| || |||| ||| | || ||  |||||||||  |  | ||||||||||||||||||||||    
T  40660122 ctcaaaaccac-cctcaatgaagaaactctaagagaaaatctaaaaagagaaaactagggccggctta 40660188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 40626120 - 40626282
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||||||||||||||| ||||| |||||||||||  |||||||||||||||||| ||||||||||| ||||| || |||||||||||||||||| ||    
T  40626120 gaaatcacaaagaaaaaacgtagatctatgtgaaaatcccttatttagattgaaatagagagaaaaagacgaagaggggtgatttcaggtcaagaataga 40626219  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccg 177  Q
    |||||||  || |||| ||  | ||  | ||||||||||| |  |||||||||||||||||||    
T  40626220 cccaaaatcacccctcaattaagaaaatggaagagaaaacctaaagagagaaaactagggccg 40626282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 36233980 - 36233886
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaac 124  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||| || ||||||||||||| |||||||||||||||    
T  36233980 aaaaatctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcatgaattgacccaaaac 36233886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 34598976 - 34598868
Alignment:
Q  18 gaaatcacaaagaaaaaa-ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatg-gatgatttcaggtcaagaattg 115  Q
    ||||||||||| |||||| |||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||| | |||||| |||||||||||||    
T  34598976 gaaatcacaaaaaaaaaaactagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagatgagttgatttgaggtcaagaattg 34598877  T
Q  116 acccaaaac 124  Q
    | |||||||    
T  34598876 atccaaaac 34598868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 3725169 - 3725062
Alignment:
Q  18 gaaatcacaaagaaaaaa-ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    |||||||||||||||||| | |||| ||||||||||| ||||||||| ||||||||| ||||||||||||||||| | ||||||| ||||||| ||||||    
T  3725169 gaaatcacaaagaaaaaatcaagatctatgtgaaaatcacttatttatattgaaatagagagaaaaagatgaagaggaatgattttaggtcaaaaattga 3725070  T
Q  117 cccaaaac 124  Q
    ||||||||    
T  3725069 cccaaaac 3725062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 9986434 - 9986607
Alignment:
Q  18 gaaatcacaaagaaaaaa-----ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaaga--tgaagatggatgatttcaggtcaag 110  Q
    ||||||||||||||||||     |||||| ||||||||||| |||||||||||||||| || ||| ||||| |  |||||| ||||||||||||||||||    
T  9986434 gaaatcacaaagaaaaaataaacctagatctatgtgaaaatcacttatttagattgaattagagataaaaaaaattgaagagggatgatttcaggtcaag 9986533  T
Q  111 aattgacccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggctta 182  Q
    |||||||||||||| || |||| ||| | || ||  |||||||||| |  |||||||||||||||| |||||||    
T  9986534 aattgacccaaaaccacccctcaatgaagaaactgtaagagaaaacctagagagagaaaactagggtcggctta 9986607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 30420667 - 30420558
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||| ||||||||||||   |||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||| || |||||||||||||| ||||    
T  30420667 gaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaaaaatt 30420568  T
Q  115 gacccaaaac 124  Q
    || |||||||    
T  30420567 gatccaaaac 30420558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 32680673 - 32680782
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||||||||||||||||   |||||| ||||||||| | ||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||     
T  32680673 gaaatcacaaagaaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagatgagtgatttcaggtcaagaatc 32680772  T
Q  115 gacccaaaac 124  Q
    |||| |||||    
T  32680773 gaccgaaaac 32680782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 7015803 - 7015910
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    |||||||||| |||||||| || || ||||||||||| | ||||||||||||||||| |||||||||||| | || || |||||||||||||||||||||    
T  7015803 gaaatcacaaggaaaaaacctaaatctatgtgaaaatcaattatttagattgaaataaagagaaaaagattaggaggggtgatttcaggtcaagaattga 7015902  T
Q  117 cccaaaac 124  Q
    ||||||||    
T  7015903 cccaaaac 7015910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 41712857 - 41713025
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||| ||||||||  ||| || ||||||||||| ||||||||||||| ||||| |||||||| |||||| |||| |||||||| ||||||||||     
T  41712857 gaaatcacagagaaaaaaacctaaatctatgtgaaaatcacttatttagattaaaatagagagaaaatgatgaaaatgggtgatttcacgtcaagaatta 41712956  T
Q  116 acccaaaacaactcctcgatggaaaatctagaagagaaaacttag--agagaaaactagggccggctta 182  Q
    ||||||||| || |||| ||| | ||  |  |||||||||| |||  |||||||||||||| |||||||    
T  41712957 acccaaaaccacccctcaatgaagaaattgtaagagaaaacctagatagagaaaactagggtcggctta 41713025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 4228122 - 4228013
Alignment:
Q  18 gaaatcacaaagaaaaaac---tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||||||||||||||||    ||||| |||||| |||| ||||||||| ||||||||| ||| ||||| |||||||||  |||||||||||||||||||    
T  4228122 gaaatcacaaagaaaaaaaacatagatctatgtgtaaatcacttatttatattgaaataaagataaaaatatgaagatgtgtgatttcaggtcaagaatt 4228023  T
Q  115 gacccaaaac 124  Q
    ||||||||||    
T  4228022 gacccaaaac 4228013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 18 - 156
Target Start/End: Original strand, 459366 - 459506
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    |||||||| |||||||||  ||| || |||||||||||  |||||||| | ||||||| |||||||| |||||||| || |||||||||||||| |||||    
T  459366 gaaatcacgaagaaaaaaacctatatctatgtgaaaatcgcttatttaaaatgaaatagagagaaaaggatgaagaggggtgatttcaggtcaaaaattg 459465  T
Q  116 acccaaaacaactcctcgatggaaaatctagaagagaaaac 156  Q
    ||||||||| || |||| ||| | || || |||||||||||    
T  459466 acccaaaaccacccctcaatgaagaaactggaagagaaaac 459506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 26025502 - 26025579
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatgg 94  Q
    ||||||||||||||||||| ||||| ||||||||||  ||||||||||||||||||| ||||||||||||||||||||    
T  26025502 gaaatcacaaagaaaaaacctagatctatgtgaaaaccacttatttagattgaaatagagagaaaaagatgaagatgg 26025579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 25087026 - 25086857
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataact----tatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaa 112  Q
    ||||||| ||| ||||||| ||||| ||||||||||| |||    ||| |||||| ||||| |  |||||||||||||| || |||||||||||||| ||    
T  25087026 gaaatcaaaaataaaaaacctagatctatgtgaaaatcactcacttatatagattcaaatagatggaaaaagatgaagaggggtgatttcaggtcaataa 25086927  T
Q  113 ttgacccaaaacaactcctcgatggaaaatctagaagagaaaacttagagagaaaactagggccggctta 182  Q
    |||||||||||| || |||  ||| | || |  ||||||||||| ||||||||||||||| |||||||||    
T  25086926 ttgacccaaaaccacccctaaatgaagaaaccggaagagaaaacctagagagaaaactagagccggctta 25086857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 18 - 168
Target Start/End: Complemental strand, 17319311 - 17319163
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    |||||||  |||||||||| ||||| ||||||||||||  ||||||||||||||||| | ||||||| |||| || ||||||||||||||||| ||||||    
T  17319311 gaaatcatgaagaaaaaacctagatctatgtgaaaatag-ttatttagattgaaatagatagaaaaa-atgaggagggatgatttcaggtcaaaaattga 17319214  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaacttagagagaaaa 168  Q
    |||||| | | |||||  || |||| || ||||||||||| |||||||||||    
T  17319213 cccaaatcca-tcctcattgaaaaaactcgaagagaaaacctagagagaaaa 17319163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 39641950 - 39642067
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    |||||||| |||||||||   |||||| ||||||||||| | ||||||| ||||||||| ||||||||||||||||||   |||||||||||||| ||||    
T  39641950 gaaatcacgaagaaaaaaaacctagatctatgtgaaaatcatttatttaaattgaaatagagagaaaaagatgaagataagtgatttcaggtcaaaaatt 39642049  T
Q  115 gacccaaaacaactcctc 132  Q
    || ||||| | |||||||    
T  39642050 gatccaaagccactcctc 39642067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 31581812 - 31581886
Alignment:
Q  18 gaaatcacaaagaaaa-aactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaaga 91  Q
    ||||||| |||||||| |||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  31581812 gaaatcaaaaagaaaaaaactagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaaga 31581886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 41431017 - 41430929
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcag 104  Q
    |||||||||||||||||   |||||| ||||| ||| | ||||||||||||||||||||||||||||||||||||| || |||||||||    
T  41431017 gaaatcacaaagaaaaacacctagatctatgtaaaagtgacttatttagattgaaatatagagaaaaagatgaagaggggtgatttcag 41430929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 42949690 - 42949605
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagag-aaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||| || |||||||| ||||||||||    
T  42949690 aaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaaagatgaagaggggtgatttcaagtcaagaatt 42949605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 20047174 - 20047281
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    |||||||||| |||||||  ||| || ||||| ||| | ||||||||||||||||| | ||||||||||||||| | || ||||||||||||||||||||    
T  20047174 gaaatcacaatgaaaaaaacctaaatctatgtaaaagtcacttatttagattgaaaaagagagaaaaagatgaata-gggtgatttcaggtcaagaattg 20047272  T
Q  116 acccaaaac 124  Q
    | |||||||    
T  20047273 atccaaaac 20047281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 348 - 435
Target Start/End: Complemental strand, 34375225 - 34375138
Alignment:
Q  348 tatttttggatacccaaatagattttacgtgtacacataacttatttataattttttaataataatacataataagtactcaatccct 435  Q
    |||||||||||||  |||||||| | || ||||||||| |||||||||||||||||||||| || ||| ||||||| | |||||||||    
T  34375225 tatttttggatacttaaatagatctcacatgtacacatcacttatttataattttttaatagtagtacctaataagaattcaatccct 34375138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 8805855 - 8805781
Alignment:
Q  18 gaaatcacaaagaaaaaa-ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaaga 91  Q
    |||||||||||||||||| ||||||  |||||||||| ||||||||| ||||||||| ||||||||| |||||||    
T  8805855 gaaatcacaaagaaaaaacctagatccatgtgaaaatcacttatttaaattgaaataaagagaaaaatatgaaga 8805781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 22421724 - 22421659
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaa 82  Q
    ||||||||||||||||||| ||||| ||||||||| | ||||||||||||||||||| ||||||||    
T  22421724 gaaatcacaaagaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaa 22421659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 27949398 - 27949306
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaa 123  Q
    ||||| |||||| ||||||||||| ||||||||||||||||| | || ||||| |||||| | |  |||||||||||||||||||| |||||||    
T  27949398 aaaaacctagatctatgtgaaaatcacttatttagattgaaacagagcgaaaaggatgaata-gtgtgatttcaggtcaagaattgtcccaaaa 27949306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 331 - 435
Target Start/End: Original strand, 37347766 - 37347870
Alignment:
Q  331 tctacaatggaaaaatttatttttggatacccaaatagattttacgtgtacacataacttatttataattttttaataataatacataataagtactcaa 430  Q
    ||||||||||||| || ||||||||| | |  |||| ||| | |||||||||||| | |||||||||||||||||||| |||||  ||||||| | ||||    
T  37347766 tctacaatggaaatatctatttttgggttcttaaatggatctcacgtgtacacatcatttatttataattttttaatagtaatatctaataagaattcaa 37347865  T
Q  431 tccct 435  Q
    |||||    
T  37347866 tccct 37347870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 32197887 - 32197986
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||||||||||||||| || || ||||  ||||| | ||||||| ||||||||| |||||||||||||||||||  ||||||  |||||| ||||||    
T  32197887 gaaatcacaaagaaaaaacctaaatttatgcaaaaatcatttatttatattgaaataaagagaaaaagatgaagatgagtgatttttggtcaaaaattga 32197986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 14955482 - 14955389
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagag--aaaaagatgaagatggatgatttcaggtcaagaattgac 117  Q
    |||||||||||| ||| |||||| |||| ||||||||||||||||| | ||||  ||||||||| ||| ||||||||  ||||||| |||||||    
T  14955482 aaagaaaaaacttgatgtatgtggaaatcacttatttagattgaaagaaagaggaaaaaagatgcagagggatgattctaggtcaaaaattgac 14955389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 124
Target Start/End: Original strand, 30923593 - 30923672
Alignment:
Q  43 tatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaac 124  Q
    ||||| ||||| | |||||||||||||||||  ||| ||||||||||||||| ||||||| |||||| |||||||| |||||    
T  30923593 tatgtaaaaatcatttatttagattgaaata--gagtaaaagatgaagatgggtgatttcgggtcaaaaattgacctaaaac 30923672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 374 - 431
Target Start/End: Original strand, 21848170 - 21848227
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataataatacataataagtactcaat 431  Q
    |||||||||||| ||||||||||||||||||||||| ||||| || |||| |||||||    
T  21848170 acgtgtacacatcacttatttataattttttaataaaaatacttattaaggactcaat 21848227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 43 - 101
Target Start/End: Complemental strand, 18695010 - 18694951
Alignment:
Q  43 tatgtgaaaataacttatttagattgaaatatagag-aaaaagatgaagatggatgattt 101  Q
    ||||| ||||| ||||||||||||||||||| |||| ||||||||||||||| |||||||    
T  18695010 tatgtaaaaatcacttatttagattgaaatagagagaaaaaagatgaagatgaatgattt 18694951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 124
Target Start/End: Complemental strand, 24587662 - 24587595
Alignment:
Q  57 ttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaac 124  Q
    ||||||| ||||||||||||| |||||||||||||  | ||||||  |||||| ||||||||||||||    
T  24587662 ttatttaaattgaaatatagataaaaagatgaagagaggtgattttgggtcaaaaattgacccaaaac 24587595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 4904285 - 4904330
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||    
T  4904285 aaagaaaaaacttgatatatgtgaaaaccacttatttagattgaaa 4904330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 13141421 - 13141352
Alignment:
Q  49 aaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacc 118  Q
    |||| |||||||||||||||||||  | | |||||||||| ||||||||||||  |||||| ||||||||    
T  13141421 aaaaaaacttatttagattgaaatgaaaataaaaagatgatgatggatgattttgggtcaaaaattgacc 13141352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 374 - 431
Target Start/End: Complemental strand, 26312622 - 26312565
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataataatacataataagtactcaat 431  Q
    |||||||||||| ||| |||||||||||||||||| || ||| ||||||| |||||||    
T  26312622 acgtgtacacatcactcatttataattttttaatagtagtacctaataagcactcaat 26312565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 374 - 431
Target Start/End: Complemental strand, 39446468 - 39446411
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataataatacataataagtactcaat 431  Q
    |||||||||||| ||||||||||||||||||||| | ||||| || |||| |||||||    
T  39446468 acgtgtacacatcacttatttataattttttaatgaaaatacttattaaggactcaat 39446411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 43397260 - 43397305
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||    
T  43397260 aaagaaaaaacttgatatatgtgaaaaccacttatttagattgaaa 43397305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 368 - 420
Target Start/End: Complemental strand, 8513848 - 8513797
Alignment:
Q  368 gattttacgtgtacacataacttatttataattttttaataataatacataat 420  Q
    ||||| ||||||||| |||||||||||||||| |||||||| |||||||||||    
T  8513848 gatttcacgtgtacatataacttatttataat-ttttaatagtaatacataat 8513797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 10237345 - 10237452
Alignment:
Q  18 gaaatcacaaagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagag--aaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    |||||||| ||  ||||||| ||| ||||||||||| ||||||||||||||||| | || |  ||||||||| ||| || |||||  ||||||| |||||    
T  10237345 gaaatcacgaaagaaaaacttgatgtatgtgaaaatcacttatttagattgaaagaaaggggaaaaaagatgtagaggggtgattctaggtcaaaaattg 10237444  T
Q  116 acccaaaa 123  Q
    ||| ||||    
T  10237445 acctaaaa 10237452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 379 - 431
Target Start/End: Original strand, 12863529 - 12863581
Alignment:
Q  379 tacacataacttatttataattttttaataataatacataataagtactcaat 431  Q
    ||||||| ||||||||||||| ||||||||| |||||||| |||| |||||||    
T  12863529 tacacatcacttatttataatattttaataaaaatacatattaaggactcaat 12863581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 23933762 - 23933818
Alignment:
Q  27 aagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaa 83  Q
    ||||||||| | ||||||||||||| | ||||||||||||||||||| || ||||||    
T  23933762 aagaaaaaaattgatatatgtgaaagtcacttatttagattgaaataaagggaaaaa 23933818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 3308893 - 3308799
Alignment:
Q  31 aaaaactagatatatgtgaaaataacttatttagattgaaatatagag--aaaaagatgaagatggatgatttcaggtcaagaattgacccaaaa 123  Q
    ||||||| ||| ||||||||||| ||||||||||||||||||| || |  ||||||||| | | || |||||  ||||||| |||||||| ||||    
T  3308893 aaaaacttgatgtatgtgaaaatcacttatttagattgaaataaaggggaaaaaagatgcaaaggggtgattctaggtcaaaaattgacctaaaa 3308799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 8308161 - 8308054
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaa--gatgaagatggatgatttcaggtcaagaatt 114  Q
    |||||||| |||||||||| ||||| ||||||||||| ||  |||||||||||| || ||| |||||  |||||||| |||| |||||| ||||| | ||    
T  8308161 gaaatcacgaagaaaaaacctagatctatgtgaaaatcac--atttagattgaattagagaaaaaaaaagatgaagaaggattatttcaagtcaaaagtt 8308064  T
Q  115 gacccaaaac 124  Q
    || |||||||    
T  8308063 gatccaaaac 8308054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 9374648 - 9374780
Alignment:
Q  18 gaaatcacaaagaaaaaact-agatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    |||||||| |||||||| || |||| |||||||||||  |||||||| || ||||      ||||||||||||||  | |||||||| ||||| ||||||    
T  9374648 gaaatcacgaagaaaaatcttagatttatgtgaaaatcccttatttaaatagaaa------gaaaaagatgaagaatgttgatttcatgtcaaaaattga 9374741  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaa 155  Q
    |||||||| |  |||| ||| | || |||||||||||||    
T  9374742 cccaaaaccatccctcaatgaagaaactagaagagaaaa 9374780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 350 - 449
Target Start/End: Complemental strand, 9733825 - 9733726
Alignment:
Q  350 tttttggatacccaaatagattttacgtgtacacataacttatttataattttttaataataatacataataagtactcaatccctgcaattcaacatct 449  Q
    |||||||||||  |||| |||   |||||||||||| |||||||||||| | |||||||||| ||  ||||||| ||||||| ||| ||| ||| |||||    
T  9733825 tttttggatacttaaatggatcacacgtgtacacatcacttatttataactctttaataatagtatctaataagaactcaattcctccaactcagcatct 9733726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 380 - 430
Target Start/End: Original strand, 4062552 - 4062602
Alignment:
Q  380 acacataacttatttataattttttaataataatacataataagtactcaa 430  Q
    |||||| |||| |||||||||||||||||||| || |||||| ||||||||    
T  4062552 acacatcacttttttataattttttaataatagtatataataggtactcaa 4062602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 9418408 - 9418303
Alignment:
Q  18 gaaatcacaaagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgac 117  Q
    ||||||||||  |||||||||||| ||||||||||| ||||| ||| ||||||||| ||| ||||  || ||||||  |||||| | |||||  |||||     
T  9418408 gaaatcacaacaaaaaaactagatctatgtgaaaatcactta-ttaaattgaaatagagataaaacaattaagatgagtgattttatgtcaaacattgat 9418310  T
Q  118 ccaaaac 124  Q
    |||||||    
T  9418309 ccaaaac 9418303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 374 - 432
Target Start/End: Complemental strand, 9583293 - 9583235
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataataatacataataagtactcaatc 432  Q
    |||||||| ||| |||||||||||||||||||||| || ||  ||||||| ||||||||    
T  9583293 acgtgtacgcatcacttatttataattttttaatagtagtatctaataagcactcaatc 9583235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 380 - 430
Target Start/End: Complemental strand, 11916078 - 11916028
Alignment:
Q  380 acacataacttatttataattttttaataataatacataataagtactcaa 430  Q
    |||||| |||| |||||||||||||||||||| ||| ||||| ||||||||    
T  11916078 acacattacttttttataattttttaataatagtacctaataggtactcaa 11916028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 377 - 435
Target Start/End: Complemental strand, 15269345 - 15269287
Alignment:
Q  377 tgtacacataacttatttataattttttaataataatacataataagtactcaatccct 435  Q
    ||||||||| ||| |||||||||||||||||| || | | ||||||||| |||||||||    
T  15269345 tgtacacattactcatttataattttttaatagtagtgcctaataagtattcaatccct 15269287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 103
Target Start/End: Complemental strand, 23903382 - 23903294
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttca 103  Q
    |||||||| |||||||||   |||||||||||| ||||  ||||||||| ||| ||||  |||||||||||| ||| ||||| ||||||    
T  23903382 gaaatcacgaagaaaaaaaatctagatatatgtcaaaaccacttatttatattaaaatggagagaaaaagataaaggtggataatttca 23903294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 389 - 447
Target Start/End: Original strand, 37648276 - 37648334
Alignment:
Q  389 ttatttataattttttaataataatacataataagtactcaatccctgcaattcaacat 447  Q
    |||||| |||||||||| ||||| ||| ||||||| ||||||||||| |||| ||||||    
T  37648276 ttatttgtaattttttagtaatagtacctaataagcactcaatccctccaatccaacat 37648334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 39285402 - 39285496
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatataga-gaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaa 123  Q
    |||||||||||| ||||||||||  ||||||||| | ||||||  ||| ||||||||| ||||| | ||||||||  ||||  ||||||||||||    
T  39285402 aaaaaactagatttatgtgaaaaccacttatttaaaatgaaatggagaggaaaaagataaagataggtgatttcaactcaaatattgacccaaaa 39285496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 5428007 - 5428051
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||||| |||| ||||||||| ||||||||||||||||||    
T  5428007 aaagaaaaaacttgatagatgtgaaaa-aacttatttagattgaaa 5428051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 374 - 431
Target Start/End: Complemental strand, 11922095 - 11922038
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataataatacataataagtactcaat 431  Q
    |||||||||||| ||| |||||||||||||||||| || ||| ||| ||| |||||||    
T  11922095 acgtgtacacattactcatttataattttttaatagtagtacctaaaaagcactcaat 11922038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 11985370 - 11985415
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||||| ||||||||||||||  ||||||||| |||||||    
T  11985370 aaagaaaaaacttgatatatgtgaaaaccacttatttaaattgaaa 11985415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 12648064 - 12648109
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||| ||| |||||||||| |||| |||||||||||||||||    
T  12648064 aaagaaaacacttgatatatgtggaaatcacttatttagattgaaa 12648109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 378 - 431
Target Start/End: Original strand, 14772902 - 14772955
Alignment:
Q  378 gtacacataacttatttataattttttaataataatacataataagtactcaat 431  Q
    |||||||| | | |||||||||||||||| |||| ||| |||||||||||||||    
T  14772902 gtacacatcattcatttataattttttaacaatagtacctaataagtactcaat 14772955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 374 - 431
Target Start/End: Original strand, 16117884 - 16117941
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataataatacataataagtactcaat 431  Q
    ||||||||| || ||| ||||||||||||||||||  ||||| ||||||| |||||||    
T  16117884 acgtgtacatatcactcatttataattttttaatatcaatacctaataagcactcaat 16117941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 29279710 - 29279755
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||| ||||||| ||||||||||||||  |||||||||||||||||    
T  29279710 aaaggaaaaacttgatatatgtgaaaaccacttatttagattgaaa 29279755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 31128919 - 31128964
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||| ||||||| ||||||||||||||  |||||||||||||||||    
T  31128919 aaaggaaaaacttgatatatgtgaaaaccacttatttagattgaaa 31128964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 387 - 432
Target Start/End: Complemental strand, 34149797 - 34149752
Alignment:
Q  387 acttatttataattttttaataataatacataataagtactcaatc 432  Q
    ||||||||||| ||||||||||||||||  ||||||||| ||||||    
T  34149797 acttatttatatttttttaataataatatctaataagtattcaatc 34149752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 374 - 415
Target Start/End: Complemental strand, 44677707 - 44677666
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataataatac 415  Q
    ||||||||||||  ||||||||||||||||||||| ||||||    
T  44677707 acgtgtacacatctcttatttataattttttaatagtaatac 44677666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 2e-54; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 29503444 - 29503277
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||||||||||||||| ||||| ||||||||||| | ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||    
T  29503444 gaaatcacaaagaaaaaacctagatctatgtgaaaatcaattatttagattgaaatatagagaaaaatatgaagatgggtgatttcaggtcaagaattga 29503345  T
Q  117 cccaaaa-caactcctcgatggaaaatctagaagagaaaacttag--agagaaaactagggccggctt 181  Q
    ||||||| || | |||||||| |||||||||||||||||||||||  |||||||||||||||||||||    
T  29503344 cccaaaatcaccccctcgatgaaaaatctagaagagaaaacttagaaagagaaaactagggccggctt 29503277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 39917489 - 39917604
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    |||||||||| |||||||| ||||| ||||||||||| |||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||    
T  39917489 gaaatcacaaggaaaaaacctagatctatgtgaaaatcacttatttagattgaattagagagaaaaatatgaagatggatgatttcaggtcaagaattga 39917588  T
Q  117 cccaaaacaactcctc 132  Q
    |||||||| |||||||    
T  39917589 cccaaaaccactcctc 39917604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 4172549 - 4172441
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||||  |||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| | || ||||||||    
T  4172549 gaaatcacaaagaaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagatggatgattttatgttaagaattg 4172450  T
Q  116 acccaaaac 124  Q
    |||||||||    
T  4172449 acccaaaac 4172441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 4178547 - 4178439
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||||  |||||| ||| ||||||| ||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||||    
T  4178547 gaaatcacaaagaaaaaaagctagatttatctgaaaatcacttatttagattgaaatagagagaaaaagatgaagatgggtgattttaggtcaagaattg 4178448  T
Q  116 acccaaaac 124  Q
    |||||||||    
T  4178447 acccaaaac 4178439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 50611509 - 50611677
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||||  |||||| ||| ||||||| ||||||||||||||||||||||||||||||||||||| || |||||| ||||||| |||||    
T  50611509 gaaatcacaaagaaaaaaacctagatctatatgaaaatcacttatttagattgaaatatagagaaaaagatgaagaggggtgattttaggtcaataattg 50611608  T
Q  116 acccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggctta 182  Q
    ||||||||| |   ||| ||| | || | | ||||||||||||  ||||| |||||||| |||||||||    
T  50611609 acccaaaaccatctctcaatgaagaaacaataagagaaaacttaaagagaaaaaactagagccggctta 50611677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 25631618 - 25631727
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||||||||||||||||   |||||| ||||||||||| ||||||||||||||||||| ||||||||||||| ||| ||||||||| ||||||| ||||    
T  25631618 gaaatcacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagatggagagggatgattttaggtcaaaaatt 25631717  T
Q  115 gacccaaaac 124  Q
    ||||||||||    
T  25631718 gacccaaaac 25631727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 44907490 - 44907599
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||| ||||||||||||   |||||| ||||||||||| |||| |||||||||||||| ||||||||||||||||| || |||||||||||||||||||    
T  44907490 gaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttgtttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagaatt 44907589  T
Q  115 gacccaaaac 124  Q
    ||||||||||    
T  44907590 gacccaaaac 44907599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 14464492 - 14464382
Alignment:
Q  18 gaaatcacaaagaaaaaac----tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaat 113  Q
    ||||||||||||||||||     ||||| ||||||||||| ||||||||||||||||||| ||||||||||||||| | || ||||||||||||||||||    
T  14464492 gaaatcacaaagaaaaaaaaacttagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaataggggtgatttcaggtcaagaat 14464393  T
Q  114 tgacccaaaac 124  Q
    |||||||||||    
T  14464392 tgacccaaaac 14464382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 36906104 - 36905996
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||| ||||||||||||  ||| || ||||||||||| ||||||||| ||||||||| ||||||||||||||||| || ||||||||||||||||||||    
T  36906104 gaaattacaaagaaaaaaacctaaatctatgtgaaaatcacttatttatattgaaataaagagaaaaagatgaagaagggtgatttcaggtcaagaattg 36906005  T
Q  116 acccaaaac 124  Q
    |||||||||    
T  36906004 acccaaaac 36905996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 18 - 165
Target Start/End: Complemental strand, 46934624 - 46934476
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    |||||||  |||||||||| | ||| ||||||||||| ||||||||||||||||||| ||||| ||||||||||| || |||||||||||||| ||||||    
T  46934624 gaaatcaacaagaaaaaacctggatctatgtgaaaatcacttatttagattgaaatagagagagaaagatgaagaggggtgatttcaggtcaaaaattga 46934525  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaacttagagaga 165  Q
    || ||||| || |||| ||| | ||  ||||||||||||| ||||||||    
T  46934524 ccaaaaaccacccctcaatgaagaaagtagaagagaaaacctagagaga 46934476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 38440670 - 38440777
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||| ||||||||||| ||||| ||||||||||| ||||||||||||||||||| |||||||||||| |||| |  |||||||||||||||||||||    
T  38440670 gaaatcaaaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagataaagaggagtgatttcaggtcaagaattga 38440769  T
Q  117 cccaaaac 124  Q
    | ||||||    
T  38440770 ctcaaaac 38440777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 49552316 - 49552423
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||||||||||||||| |||||  |||||||| | ||||||||||||||||||| ||| |||| |||||||| || |||||||||||||||||||||    
T  49552316 gaaatcacaaagaaaaaacctagattaatgtgaaattcacttatttagattgaaatagagaaaaaatgatgaagaggggtgatttcaggtcaagaattga 49552415  T
Q  117 cccaaaac 124  Q
    ||||||||    
T  49552416 cccaaaac 49552423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 3850561 - 3850655
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaac 124  Q
    ||||| |||||| ||||||||| | ||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||| |||||||    
T  3850561 aaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtcaagaattgatccaaaac 3850655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 18 - 165
Target Start/End: Complemental strand, 25162418 - 25162270
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||||  |||||| ||||||||| | ||||||||||||||||||| |||||||||||||||||||| ||||||||  ||||||||||    
T  25162418 gaaatcacaaagaaaaaaacctagatctatgtgaaa-tcacttatttagattgaaatagagagaaaaagatgaagatgggtgatttcaaatcaagaattg 25162320  T
Q  116 acccaaaacaactcctcgatggaaaatctagaagagaaaacttagagaga 165  Q
    || |||||| || ||||  || | || ||  |||||||||| ||||||||    
T  25162319 acacaaaaccacccctcagtgaagaaactgtaagagaaaacctagagaga 25162270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 2342474 - 2342367
Alignment:
Q  18 gaaatcacaaagaaaaaacta--gatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    |||||||||||||||||| ||  ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| || ||| |||||||  |||||||    
T  2342474 gaaatcacaaagaaaaaaatatagatatatgtgaaaatcacttatttagattgaaatagagagaaaaagatgaagagggttga-ttcaggtttagaattg 2342376  T
Q  116 acccaaaac 124  Q
    |||||||||    
T  2342375 acccaaaac 2342367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 17237787 - 17237683
Alignment:
Q  18 gaaatcacaaagaaaaaa----ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaat 113  Q
    ||||||||||||||||||    ||| || ||||||||||| ||||||||||||||||||| ||||||| ||||||||||| ||||||| |||||||||||    
T  17237787 gaaatcacaaagaaaaaaaaacctaaatctatgtgaaaatcacttatttagattgaaatagagagaaacagatgaagatgaatgattttaggtcaagaat 17237688  T
Q  114 tgacc 118  Q
    |||||    
T  17237687 tgacc 17237683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 32607451 - 32607343
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||| ||||||||||||   |||||| ||||||||||| ||||||||||||||||||| |||||||| |||||||| || | |||||||||||||||||    
T  32607451 gaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaatgatgaagaggggt-atttcaggtcaagaatt 32607353  T
Q  115 gacccaaaac 124  Q
    ||||||||||    
T  32607352 gacccaaaac 32607343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 12116062 - 12115968
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaac 124  Q
    ||||| |||||| | ||||||||| ||||||||||||||||||| |||| ||||||||||||  |||||||||||||||||||||||| ||||||    
T  12116062 aaaaacctagatctttgtgaaaatcacttatttagattgaaataaagaggaaaagatgaagagagatgatttcaggtcaagaattgactcaaaac 12115968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 38855128 - 38855295
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||||||||||||||||   |||||| ||||||||||| ||||||||||||||| ||| ||||||||||||||||| || ||||||  ||||||||| |    
T  38855128 gaaatcacaaagaaaaaaaatctagatctatgtgaaaatcacttatttagattgatatagagagaaaaagatgaagaggggtgattttcggtcaagaa-t 38855226  T
Q  115 gacccaaaacaactcctcgatggaaaatctag-aagagaaaactt--agagagaaaactagggccggctt 181  Q
    |||||||||| || |||| || ||| |  ||| |||||||||| |  |||||||||||||||| ||||||    
T  38855227 gacccaaaaccacccctcaat-gaagaaatagtaagagaaaacctagagagagaaaactagggtcggctt 38855295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 46178559 - 46178451
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaata-acttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    |||||||| |||||||||| ||||| ||||||||||   |||||||||||||||| || ||||||||||||||||| ||||||||||||||||  |||||    
T  46178559 gaaatcacgaagaaaaaacctagatctatgtgaaaaagcacttatttagattgaattagagagaaaaagatgaagagggatgatttcaggtcataaattg 46178460  T
Q  116 acccaaaac 124  Q
    |||||||||    
T  46178459 acccaaaac 46178451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 49 - 161
Target Start/End: Original strand, 36735277 - 36735389
Alignment:
Q  49 aaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaacaactcctcgatggaaaatctagaa 148  Q
    ||||| ||||||||| ||||||||||||||| ||| ||||||| |||||||||||||| || |||||||| ||||| ||  ||| ||| | || ||||||    
T  36735277 aaaatcacttatttaaattgaaatatagagagaaaaatgaagagggatgatttcaggtaaaaaattgaccaaaaaccacctctcaatgaagaaactagaa 36735376  T
Q  149 gagaaaacttaga 161  Q
    |||||||||||||    
T  36735377 gagaaaacttaga 36735389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 59 - 123
Target Start/End: Original strand, 51202384 - 51202448
Alignment:
Q  59 atttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaa 123  Q
    ||||||||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  51202384 atttagattgaaatagagagaaaaatatgaagatgggtgatttcaggtcaagaattgacccaaaa 51202448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 35499307 - 35499402
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaaga-tggatgatttcaggtcaagaattgacccaaaac 124  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||  || ||||||||||| || |||||||| |||||    
T  35499307 aaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagggggtgatttcaggtaaaaaattgaccaaaaac 35499402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 22802971 - 22802897
Alignment:
Q  49 aaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaa 123  Q
    ||||| ||||||||||||||||||| ||||||||||||||||| |  |||||||| ||||| |||||||||||||    
T  22802971 aaaatcacttatttagattgaaatagagagaaaaagatgaagaggagtgatttcatgtcaaaaattgacccaaaa 22802897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 37 - 165
Target Start/End: Complemental strand, 21488073 - 21487944
Alignment:
Q  37 tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaac-aactcctcgat 135  Q
    ||||| || |||||| | ||||||||||||||||||  |||||||||||||||||| | |||||||||||||| |||||||  |||||   |||||| ||    
T  21488073 tagatctacgtgaaagtcacttatttagattgaaatggagagaaaaagatgaagattggtgatttcaggtcaaaaattgacagaaaacttcctcctcaat 21487974  T
Q  136 ggaaaatctagaagagaaaacttagagaga 165  Q
      | ||| | ||||||||||||||||||||    
T  21487973 aaagaatatggaagagaaaacttagagaga 21487944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 33579817 - 33579772
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  33579817 aaagaaaaaactagatatatgtgaaaatcacttatttagattgaaa 33579772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 42719489 - 42719406
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaat 113  Q
    ||||| |||||| ||  ||||||| ||||||||| ||||||||| ||||||||| | |||||||  ||||||||||||||||||    
T  42719489 aaaaacctagatctacatgaaaatcacttatttaaattgaaatagagagaaaaatacgaagatgagtgatttcaggtcaagaat 42719406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 374 - 433
Target Start/End: Original strand, 52744692 - 52744751
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataataatacataataagtactcaatcc 433  Q
    |||||||||||| |||||||||||||||||||||| ||| || ||| |||||||||||||    
T  52744692 acgtgtacacattacttatttataattttttaatagtaacacctaacaagtactcaatcc 52744751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 182
Target Start/End: Complemental strand, 25849782 - 25849636
Alignment:
Q  37 tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaacaactcctcgatg 136  Q
    ||||| |||||||| || |||||| |  ||||||||| | ||||||||| ||| | || |||||||| ||||| ||||||| |||||| || |||| ||     
T  25849782 tagatctatgtgaacatcacttatctgaattgaaatagaaagaaaaagacgaataagggtgatttcaagtcaaaaattgactcaaaaccacccctcaatt 25849683  T
Q  137 gaaaatctagaagagaaaacttagagag-aaaactagggccggctta 182  Q
     | || || ||||| ||||| ||||||| ||||||||||||||||||    
T  25849682 aagaagctggaagaaaaaacctagagagaaaaactagggccggctta 25849636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 374 - 435
Target Start/End: Original strand, 13755125 - 13755186
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataataatacataataagtactcaatccct 435  Q
    |||||||||||| ||| |||||||||||||||||| || ||| ||||||| |||||||||||    
T  13755125 acgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccct 13755186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 374 - 435
Target Start/End: Original strand, 13768526 - 13768587
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataataatacataataagtactcaatccct 435  Q
    |||||||||||| ||| |||||||||||||||||| || ||| ||||||| |||||||||||    
T  13768526 acgtgtacacatcactcatttataattttttaatagtagtacttaataagaactcaatccct 13768587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 370 - 481
Target Start/End: Original strand, 36277729 - 36277840
Alignment:
Q  370 ttttacgtgtacacataacttatttataattttttaataataatacataataagtactcaatccctgcaattcaacatctaacataaatttgcttaaaac 469  Q
    ||||| || ||||||  ||| |||||||||||||||||| |||||  ||||||||| ||||| ||| ||| ||| ||||| ||| ||||||  |||||      
T  36277729 ttttatgtatacacagcactaatttataattttttaatagtaatatctaataagtattcaattcctccaactcagcatctcacacaaatttttttaaatt 36277828  T
Q  470 aaacccactaat 481  Q
    ||||||||||||    
T  36277829 aaacccactaat 36277840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 37169213 - 37169106
Alignment:
Q  18 gaaatcacaaagaaaaaa-ctagatatatgtgaaaa-taacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    |||||||  ||||||||| |||||| |||||||||| | ||||||||| |||||| || |||||||||| ||||||  | ||||||||||| || |||||    
T  37169213 gaaatcaagaagaaaaaatctagatctatgtgaaaaatcacttatttatattgaattagagagaaaaaggtgaagagaggtgatttcaggtaaaaaattg 37169114  T
Q  116 acccaaaa 123  Q
    | ||||||    
T  37169113 atccaaaa 37169106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 36461570 - 36461615
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||||| |||| |||||||||| |||||||||||||||||    
T  36461570 aaagaaaaaacttgatagatgtgaaaatcacttatttagattgaaa 36461615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 374 - 431
Target Start/End: Original strand, 40242157 - 40242214
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataataatacataataagtactcaat 431  Q
    ||||||| | || |||||||||||||||||||||| |||||| ||||||| |||||||    
T  40242157 acgtgtatatatcacttatttataattttttaatagtaatacctaataagcactcaat 40242214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 45568583 - 45568628
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||||| |||| ||||||||| ||||||||||||||||||    
T  45568583 aaagaaaaaacttgatagatgtgaaaacaacttatttagattgaaa 45568628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 47896101 - 47896056
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||    
T  47896101 aaagaaaaaacttgatatatgtgaaaaccacttatttagattgaaa 47896056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 109
Target Start/End: Complemental strand, 53508169 - 53508085
Alignment:
Q  27 aagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagag--aaaaagatgaagatggatgatttcaggtcaa 109  Q
    ||||||||||| ||||||||||||||| ||||||||| ||||||| | | ||  ||||||| | |||||| |||||| |||||||    
T  53508169 aagaaaaaacttgatatatgtgaaaatcacttatttatattgaaagaaaaaggaaaaaagacgcagatgggtgattttaggtcaa 53508085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 124
Target Start/End: Original strand, 6823553 - 6823597
Alignment:
Q  80 aaaagatgaagatggatgatttcaggtcaagaattgacccaaaac 124  Q
    |||||||||||| || ||||||||| |||||||||||||||||||    
T  6823553 aaaagatgaagaggggtgatttcagatcaagaattgacccaaaac 6823597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 380 - 431
Target Start/End: Complemental strand, 1294670 - 1294619
Alignment:
Q  380 acacataacttatttataattttttaataataatacataataagtactcaat 431  Q
    |||||| ||||||||||||||||||||||| | |||||| |||| |||||||    
T  1294670 acacatcacttatttataattttttaataaaagtacatattaaggactcaat 1294619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 374 - 460
Target Start/End: Original strand, 45603407 - 45603493
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataataatacataataagtactcaatccctgcaattcaacatctaacataaattt 460  Q
    |||| ||||||| | | |||||||||||| |||||||| ||| ||||||  |||||||||||  ||| |||||||| ||| ||||||    
T  45603407 acgtatacacatcattcatttataattttataataatagtacttaataaacactcaatcccttaaatccaacatctcacacaaattt 45603493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 374 - 431
Target Start/End: Original strand, 1559531 - 1559588
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataataatacataataagtactcaat 431  Q
    |||||||||||| |||||||||||||| |||||||| ||||  || |||| |||||||    
T  1559531 acgtgtacacatcacttatttataattgtttaataaaaatatctattaagaactcaat 1559588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 20987938 - 20987983
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||||| ||||||| ||||||| ||||||||| |||||||    
T  20987938 aaagaaaaaactcgatatatttgaaaatcacttatttaaattgaaa 20987983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 29922002 - 29921957
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||| ||| |||||||||| |||| |||||||||||||||||    
T  29922002 aaagaaaacacttgatatatgtggaaatcacttatttagattgaaa 29921957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 29971155 - 29971110
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||| ||| |||||||||| |||| |||||||||||||||||    
T  29971155 aaagaaaacacttgatatatgtggaaatcacttatttagattgaaa 29971110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 47042191 - 47042236
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||||  ||||||||||||||| ||||||||| |||||||    
T  47042191 aaagaaaaaacatgatatatgtgaaaatcacttatttaaattgaaa 47042236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 50194423 - 50194468
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||| ||| |||||||||| |||| |||||||||||||||||    
T  50194423 aaagaaaacacttgatatatgtggaaatcacttatttagattgaaa 50194468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 52116150 - 52116187
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttattta 63  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  52116150 aaagaaaaaacttgatatatgtgaaaatcacttattta 52116187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 54148938 - 54148893
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||||| |||| |||||||||  |||||||||||||||||    
T  54148938 aaagaaaaaacttgatagatgtgaaaaccacttatttagattgaaa 54148893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 391 - 432
Target Start/End: Complemental strand, 55272904 - 55272863
Alignment:
Q  391 atttataattttttaataataatacataataagtactcaatc 432  Q
    ||||||||||||||||||||| ||||||||||  ||||||||    
T  55272904 atttataattttttaataatagtacataataaacactcaatc 55272863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 99; Significance: 2e-48; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 18 - 176
Target Start/End: Original strand, 23425464 - 23425625
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  23425464 gaaatcacaaagaaaaaacctagatctatgtaaaaatcacttatttagattgaaatatagagaaaaagatgaagaggggtgatttcaggtcaagaattga 23425563  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggcc 176  Q
    |||||||| || |||| ||||||||||||||| || ||| ||  ||||||||||||||||||    
T  23425564 cccaaaaccacccctccatggaaaatctagaataggaaatttaaagagagaaaactagggcc 23425625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 48207886 - 48207726
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||| |||||||||||||||| || ||||||||||||||||| |||    
T  48207886 gaaatcacaaagaaaaaacatagatctatgtgaaaatcacttatttagattgaaatattgagaaaaagatgaagaggggtgatttcaggtcaagaa-tga 48207788  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccg 177  Q
    |||||||| || |||||||| ||||||||||||||||||| |  ||||||||||||| |||||    
T  48207787 cccaaaaccac-cctcgatgaaaaatctagaagagaaaacctaaagagagaaaactatggccg 48207726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 18 - 165
Target Start/End: Original strand, 45199124 - 45199272
Alignment:
Q  18 gaaatcacaaagaaaaaact-agatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    |||||||||||||||||||| |||| ||| ||||||| ||||||||| ||| |||||||||||||||||||||||||| |||||||||||||| | ||||    
T  45199124 gaaatcacaaagaaaaaacttagatctatatgaaaatcacttatttaaattaaaatatagagaaaaagatgaagatgggtgatttcaggtcaatagttga 45199223  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaacttagagaga 165  Q
     ||||||| || |||  ||||||||||||||||||||||||||||||||    
T  45199224 tccaaaaccacccctgaatggaaaatctagaagagaaaacttagagaga 45199272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 46822000 - 46821832
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||| ||||||||||||   |||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||    
T  46822000 gaaattacaaagaaaaaaaatctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagaatt 46821901  T
Q  115 gacccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggctt 181  Q
    |||||||||| || |||| ||| ||||  || |||||||||| |  |||||||||||||||||||||||    
T  46821900 gacccaaaaccacccctcaatgaaaaaattataagagaaaacctagagagagaaaactagggccggctt 46821832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 18 - 174
Target Start/End: Original strand, 42067153 - 42067311
Alignment:
Q  18 gaaatcacaaagaaaaaa-ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||| |||||||||| ||| || ||||||||||| ||||||||||||||||||||||| || ||||||||||  | |||||||||||||||||||||    
T  42067153 gaaatcagaaagaaaaaatctatatctatgtgaaaatcacttatttagattgaaatatagataacaagatgaagagaggtgatttcaggtcaagaattga 42067252  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaactt-agagagaaaactaggg 174  Q
    |||||||  || | || ||||||||||||||||||||||||| | ||||||||||||||    
T  42067253 cccaaaatcacccttcaatggaaaatctagaagagaaaacttaaaagagaaaactaggg 42067311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 20116567 - 20116405
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||| | ||||||||||||||| || |||||||||||||| ||||||    
T  20116567 gaaatcacaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagatagaaaaagatgaagaagggtgatttcaggtcaaaaattga 20116468  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccg 177  Q
    |||||||| || ||||  || | || || ||||||||||| |  |||||||||||||||||||    
T  20116467 cccaaaactacccctcattgaagaaacttgaagagaaaacatagagagagaaaactagggccg 20116405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 26583699 - 26583532
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||||  |||||||||| ||||||| ||||||||||||||||||| ||| ||||||||||||| || ||||||||||||||||||||    
T  26583699 gaaatcacaaagaaaaaaacctagatatatatgaaaatcacttatttagattgaaatagagataaaaagatgaagaggggtgatttcaggtcaagaattg 26583600  T
Q  116 acccaaaacaactcctcgatggaaaatctagaagagaaaacttag--agagaaaactagggccggctt 181  Q
    ||| ||||| || |||| ||| | || ||  |||| ||||| |||  |||||||||||||||||||||    
T  26583599 accaaaaaccacccctcaatgaagaaactgtaagaaaaaacctagaaagagaaaactagggccggctt 26583532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 1485349 - 1485509
Alignment:
Q  18 gaaatcacaaagaaaaaa-ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    |||||||||||||||||| |||||| ||||||||| | ||||||||||||||||||| ||||||||||||||||| || |||||| |||||||||||| |    
T  1485349 gaaatcacaaagaaaaaatctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagacgggtgattttaggtcaagaattaa 1485448  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaacttagagagaaaactagggccg 177  Q
    |||||||| || || | ||| | || |  ||||||||||| ||||||||||| ||||||||    
T  1485449 cccaaaaccaccccccaatgaagaaacgggaagagaaaacctagagagaaaattagggccg 1485509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 21266375 - 21266209
Alignment:
Q  18 gaaatcacaaagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgac 117  Q
    ||||||| ||||||||  |||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||  | |||||||| ||||| |||||||    
T  21266375 gaaatcaaaaagaaaaccctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagagaggtgatttcatgtcaataattgac 21266276  T
Q  118 ccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggctta 182  Q
    ||||||| || |||| ||  | || || ||||| |||||||  ||||||||||||||||||||||||    
T  21266275 ccaaaaccacccctcaataaagaaactggaagaaaaaacttaaagagagaaaactagggccggctta 21266209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 26492350 - 26492182
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||||  |||||| ||||||||||| ||||||||| ||||||||| ||||||||||||||||| || | ||||||||||||||||||    
T  26492350 gaaatcacaaagaaaaaaaactagatctatgtgaaaatcacttatttaaattgaaatagagagaaaaagatgaagaggggttatttcaggtcaagaattg 26492251  T
Q  116 acccaaaacaactcctcgatggaaaatctagaagagaaaacttagagag--aaaactagggccggctta 182  Q
    ||||||||| || |||| ||| | || ||  |||| ||||  |||||||  ||||||||||||||||||    
T  26492250 acccaaaaccacccctcaatgaagaaactgtaagacaaaatctagagagataaaactagggccggctta 26492182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 18 - 165
Target Start/End: Complemental strand, 42311265 - 42311116
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||||  |||||| |||||||| || ||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||    
T  42311265 gaaatcacaaagaaaaaaacctagatctatgtgaatatcacttatttagattgaaatagagagaaaatgatgaagagggatgatttcaggtcaagaattg 42311166  T
Q  116 acccaaaacaactcctcgatggaaaatctagaagagaaaacttagagaga 165  Q
    ||||||||| || ||||  || | || ||  |||||||||| ||||||||    
T  42311165 acccaaaaccacccctcagtgaagaaactctaagagaaaacctagagaga 42311116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 35667324 - 35667485
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||| ||||||||||| ||||| ||||||||||| ||||||||||||||||||| ||||||||| ||||||| || |||||| | ||||||||||||    
T  35667324 gaaatcaaaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaatatgaagaagggtgattttaagtcaagaattga 35667423  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaactt-agagagaaaactagggccg 177  Q
     ||||||| || |||| ||| ||||  ||||||||||||||| | | |||||||||||||||    
T  35667424 tccaaaaccacccctcaatgaaaaaattagaagagaaaacttaaaaaagaaaactagggccg 35667485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 1448922 - 1449088
Alignment:
Q  18 gaaatcacaaagaaaaaa-ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||||||| |||||| |||||| ||||||||||| ||||||||||||||||||| ||||||| |||||||| | | | |||||||||||||||||||    
T  1448922 gaaatcacaaataaaaaatctagatctatgtgaaaatcacttatttagattgaaatagagagaaagagatgaagtttggttatttcaggtcaagaattga 1449021  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggctt 181  Q
    |||||||| || |||| |   | ||||| ||||| ||||| |  |||||||||||||||||||||||    
T  1449022 cccaaaaccacccctcaacaaagaatctggaagaaaaaacctagagagagaaaactagggccggctt 1449088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 2843321 - 2843427
Alignment:
Q  18 gaaatcacaaagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgac 117  Q
    ||||| ||||| ||||| |||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||| || || |||||||||||||||||||    
T  2843321 gaaattacaaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgttttcaggtcaagaattgac 2843420  T
Q  118 ccaaaac 124  Q
    |||||||    
T  2843421 ccaaaac 2843427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 35496267 - 35496375
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||||  |||||| ||||||||||| ||||| ||||||||||||| |||||||||||||||||| | |||||| |||||||||||||    
T  35496267 gaaatcacaaagaaaaaaacctagatctatgtgaaaatcacttaattagattgaaatagagagaaaaagatgaagattggtgattttaggtcaagaattg 35496366  T
Q  116 acccaaaac 124  Q
    |||||||||    
T  35496367 acccaaaac 35496375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 46339039 - 46338930
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||| ||||||||||||   |||||| ||||||||||| ||||||||| ||||||||| ||||||||||||||||| |||| |||||||||||||||||    
T  46339039 gaaattacaaagaaaaaaaagctagatctatgtgaaaatcacttatttacattgaaataaagagaaaaagatgaagagggataatttcaggtcaagaatt 46338940  T
Q  115 gacccaaaac 124  Q
    ||||||||||    
T  46338939 gacccaaaac 46338930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 433784 - 433892
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||||  |||||| ||||||||| | | ||||||||||||||||| ||||||||||||||| | ||||||||||||||||| |||||    
T  433784 gaaatcacaaagaaaaaaatctagatctatgtgaaagtcatttatttagattgaaatagagagaaaaagatgaaaagggatgatttcaggtcaaaaattg 433883  T
Q  116 acccaaaac 124  Q
    |||||||||    
T  433884 acccaaaac 433892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 22927962 - 22928070
Alignment:
Q  18 gaaatcacaaagaaaa--aactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||  |||||||| | ||||||| | ||||||||||||||||||| ||||||||||||||| | || ||||||||||||||||||||    
T  22927962 gaaatcacaaagaaaaaaaactagatctgtgtgaaagtcacttatttagattgaaatagagagaaaaagatgaaaaggggtgatttcaggtcaagaattg 22928061  T
Q  116 acccaaaac 124  Q
    |||||||||    
T  22928062 acccaaaac 22928070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 42408347 - 42408239
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||||  ||||||  |||||||||  | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  42408347 gaaatcacaaagaaaaaaacctagatccatgtgaaaaacaattatttagattgaaataaagagaaaaagatgaagatggatgatttcaggtcaagaactg 42408248  T
Q  116 acccaaaac 124  Q
    ||| |||||    
T  42408247 accaaaaac 42408239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 26 - 165
Target Start/End: Complemental strand, 32684660 - 32684521
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaaca 125  Q
    ||||||||| |||||| ||||||||||| ||||||||||||||||||| |||||||| ||||||||    |||||||||||||||||||||||||||||     
T  32684660 aaagaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaacgatgaagacatgtgatttcaggtcaagaattgacccaaaacc 32684561  T
Q  126 actcctcgatggaaaatctagaagagaaaacttagagaga 165  Q
    || |||| ||| | || |   |||||||||| ||||||||    
T  32684560 acccctcaatgaagaaaccgtaagagaaaacctagagaga 32684521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 36143850 - 36143726
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    |||||||| |||||||||| ||||| || |||||||  |||||||||||||||| || |||||||||||||||||||||| |||||| || || | ||||    
T  36143850 gaaatcacgaagaaaaaacctagatctacgtgaaaaacacttatttagattgaattagagagaaaaagatgaagatggataatttcacgttaaaatttga 36143751  T
Q  117 cccaaaacaactcctcgatggaaaa 141  Q
     |||||||||| |||| ||| ||||    
T  36143750 tccaaaacaacccctcaatgaaaaa 36143726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 23085505 - 23085397
Alignment:
Q  19 aaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaaga-tggatgatttcaggtcaagaattg 115  Q
    |||||||||||||||||  |||||| ||||||||| | | ||||||||||||||||| | |||||||||||||||  || |||||||| ||||| |||||    
T  23085505 aaatcacaaagaaaaaaacctagatctatgtgaaagtcaattatttagattgaaatagaaagaaaaagatgaagagggggtgatttcaagtcaataattg 23085406  T
Q  116 acccaaaac 124  Q
    |||||||||    
T  23085405 acccaaaac 23085397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 31235898 - 31235991
Alignment:
Q  31 aaaaactagatatatgtgaaaa-taacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaa 123  Q
    |||| |||||| |||||||||| | ||||||||||||||||||| ||||||||||||||||| ||  ||||||| ||||| |||||||||||||    
T  31235898 aaaacctagatctatgtgaaaaatcacttatttagattgaaatagagagaaaaagatgaagaggggagatttcatgtcaaaaattgacccaaaa 31235991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 18 - 122
Target Start/End: Original strand, 1100859 - 1100963
Alignment:
Q  18 gaaatcacaaagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgac 117  Q
    |||||||| ||||||||||||||||||||  ||||| |||| || | ||||||||| |||||||||||||||||||  || |||| |||||| | |||||    
T  1100859 gaaatcacgaagaaaaaactagatatatgcaaaaatcacttgttaaaattgaaatagagagaaaaagatgaagatgagtggtttcgggtcaaaatttgac 1100958  T
Q  118 ccaaa 122  Q
    |||||    
T  1100959 ccaaa 1100963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 6001973 - 6001899
Alignment:
Q  49 aaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaa 123  Q
    ||||| ||||||||||||| |||||  ||||||||||||||||||| |||||||||||||| |||||| ||||||    
T  6001973 aaaatcacttatttagattaaaatagggagaaaaagatgaagatgggtgatttcaggtcaaaaattgatccaaaa 6001899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 35261284 - 35261174
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatag-agaaaaagatgaagatggatgatttcaggtcaagaat 113  Q
    |||||||| |||||||||   ||| || ||||||||||| |||||||| |||||||||  |  |||||||||||||||||| |||||| ||||||| |||    
T  35261284 gaaatcacgaagaaaaaaaatctaaatttatgtgaaaatcacttatttggattgaaatggactagaaaaagatgaagatgggtgattttaggtcaaaaat 35261185  T
Q  114 tgacccaaaac 124  Q
    || ||||||||    
T  35261184 tggcccaaaac 35261174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 3860935 - 3860829
Alignment:
Q  18 gaaatcacaaagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgac 117  Q
    |||||||| |||||||| | |||| ||||||||||| ||||||||| ||||||| | |||||||||||| ||||    |||||||| || || |||||||    
T  3860935 gaaatcacgaagaaaaaccaagatctatgtgaaaatcacttatttatattgaaacaaagagaaaaagataaagagatgtgatttcaagttaaaaattgac 3860836  T
Q  118 ccaaaac 124  Q
     ||||||    
T  3860835 acaaaac 3860829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 7740624 - 7740559
Alignment:
Q  18 gaaatcacaaagaaaaaa-ctagatatatgtgaaaataacttatttagattgaaatatagagaaaa 82  Q
    |||||||||||||||||| ||| || ||||||||||||| ||||||| ||||||||||||| ||||    
T  7740624 gaaatcacaaagaaaaaatctaaatctatgtgaaaataatttatttaaattgaaatatagaaaaaa 7740559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 32522019 - 32522116
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagaga-----aaaagatgaagatggatgatttcaggtcaa 109  Q
    ||||| || |||||||||| || || ||||||||||| ||||||||| ||||||||| |||||     ||||||||||||||| ||||||||||||||    
T  32522019 gaaataacgaagaaaaaacataaatctatgtgaaaatcacttatttaaattgaaatagagagagaaaaaaaagatgaagatgggtgatttcaggtcaa 32522116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 14627971 - 14628046
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaaga 91  Q
    |||||||||| |||||||  ||| || ||||||||||| |||||||||||||||| || ||| |||||||||||||    
T  14627971 gaaatcacaaggaaaaaaacctatatttatgtgaaaatcacttatttagattgaattagagaaaaaaagatgaaga 14628046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 102
Target Start/End: Original strand, 1575168 - 1575254
Alignment:
Q  18 gaaatcacaaagaaaaa--actagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttc 102  Q
    |||||||||||||||||  | ||||| |||| || |||||||||| || |||||||||  ||||||||||||||||||  |||||||    
T  1575168 gaaatcacaaagaaaaataattagatctatgcgacaataacttatgtaaattgaaataaggagaaaaagatgaagatgagtgatttc 1575254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 20083292 - 20083241
Alignment:
Q  40 atatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaaga 91  Q
    ||||||||||||||  |||||||||||||||||| | |||||||||||||||    
T  20083292 atatatgtgaaaattgcttatttagattgaaatagaaagaaaaagatgaaga 20083241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 377 - 432
Target Start/End: Original strand, 43302094 - 43302149
Alignment:
Q  377 tgtacacataacttatttataattttttaataataatacataataagtactcaatc 432  Q
    ||||||||||||| |||||||||||||||||| || ||| |||||| |||||||||    
T  43302094 tgtacacataactcatttataattttttaatagtagtacctaataaatactcaatc 43302149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 374 - 435
Target Start/End: Original strand, 5513818 - 5513880
Alignment:
Q  374 acgtgtacacataacttatttataa-ttttttaataataatacataataagtactcaatccct 435  Q
    |||||||||||| |||||||||||| |||||||||| |||||  |||||||| ||||||||||    
T  5513818 acgtgtacacatcacttatttataatttttttaatagtaatatctaataagttctcaatccct 5513880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 17499796 - 17499890
Alignment:
Q  74 tagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaacaactcctcgatggaaaatctagaagagaaaacttagagagaaaa 168  Q
    ||||||||||||||||||||  |||||| |||| ||  ||||||||||||| || |||| ||| | || |||||||||||||  || ||||||||    
T  17499796 tagagaaaaagatgaagatgagtgattttaggttaaatattgacccaaaactacccctcaatgaagaaactagaagagaaaatctaaagagaaaa 17499890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 168
Target Start/End: Complemental strand, 17553418 - 17553324
Alignment:
Q  74 tagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaacaactcctcgatggaaaatctagaagagaaaacttagagagaaaa 168  Q
    ||||||||||||||||||||  |||||| |||| ||  ||||||||||||| || |||| ||| | || |||||||||||||  || ||||||||    
T  17553418 tagagaaaaagatgaagatgagtgattttaggttaaatattgacccaaaactacccctcaatgaagaaactagaagagaaaatctaaagagaaaa 17553324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 377 - 435
Target Start/End: Original strand, 47841397 - 47841455
Alignment:
Q  377 tgtacacataacttatttataattttttaataataatacataataagtactcaatccct 435  Q
    ||||||||||||| |||||||||||| ||||| || ||  |||||||||||||||||||    
T  47841397 tgtacacataactcatttataattttgtaatagtagtatttaataagtactcaatccct 47841455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 5546317 - 5546277
Alignment:
Q  43 tatgtgaaaataacttatttagattgaaatatagagaaaaa 83  Q
    ||||||||||| ||||||||||||||||||| |||||||||    
T  5546317 tatgtgaaaatcacttatttagattgaaatagagagaaaaa 5546277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 363 - 407
Target Start/End: Complemental strand, 8352991 - 8352947
Alignment:
Q  363 aaatagattttacgtgtacacataacttatttataattttttaat 407  Q
    |||| ||||| |||||||||||||| |||||||||||||||||||    
T  8352991 aaatggatttcacgtgtacacataatttatttataattttttaat 8352947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 181
Target Start/End: Original strand, 12539127 - 12539214
Alignment:
Q  96 tgatttcaggtcaagaattgacccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggctt 181  Q
    ||||||||||||||||||||||| ||||| || |||| ||| | || || ||||||||||  |  |||||||||||||||| ||||||    
T  12539127 tgatttcaggtcaagaattgaccaaaaaccacccctcaatgaagaaactggaagagaaaatctagagagagaaaactagggtcggctt 12539214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 379 - 435
Target Start/End: Original strand, 46748010 - 46748066
Alignment:
Q  379 tacacataacttatttataattttttaataataatacataataagtactcaatccct 435  Q
    ||||||| |||||||||||||||||||||| ||  || ||||||| |||||||||||    
T  46748010 tacacatcacttatttataattttttaatagtagcacctaataagaactcaatccct 46748066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 73
Target Start/End: Original strand, 12141446 - 12141493
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaata 73  Q
    |||||||||||| |||| |||||||||  |||||||||||||||||||    
T  12141446 aaagaaaaaacttgatagatgtgaaaaccacttatttagattgaaata 12141493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 23786559 - 23786508
Alignment:
Q  20 aatcacaaagaaaaaact-agatatatgtgaaaataacttatttagattgaa 70  Q
    |||||||||||||||| | |||||| ||||||||| ||||||||||||||||    
T  23786559 aatcacaaagaaaaaatttagatatgtgtgaaaatcacttatttagattgaa 23786508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 92
Target Start/End: Original strand, 1097709 - 1097771
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagat 92  Q
    |||||||||||| ||||| ||||  ||||||||| ||||||||| | | ||||||||||||||    
T  1097709 aaaaaactagatctatgtaaaaaacacttatttaaattgaaatagataaaaaaagatgaagat 1097771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 1749275 - 1749380
Alignment:
Q  18 gaaatcacaaagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagag-aaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    |||||||| ||  ||||||| ||| ||||||||||| ||||||||||||||||| | || | ||||||||||||  || |||||  ||||||| ||||||    
T  1749275 gaaatcacgaaagaaaaacttgatgtatgtgaaaatcacttatttagattgaaagaaagggaaaaaagatgaag-cgggtgattctaggtcaaaaattga 1749373  T
Q  117 cccaaaa 123  Q
    || ||||    
T  1749374 cctaaaa 1749380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 9450283 - 9450321
Alignment:
Q  33 aaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  9450283 aaactagatagatgtgaaaatcacttatttagattgaaa 9450321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 391 - 433
Target Start/End: Complemental strand, 41015437 - 41015395
Alignment:
Q  391 atttataattttttaataataatacataataagtactcaatcc 433  Q
    ||||||||||||||||||||||||  ||||||||||| |||||    
T  41015437 atttataattttttaataataatatctaataagtacttaatcc 41015395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 48930728 - 48930686
Alignment:
Q  29 gaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    ||||||||| ||| ||||||||||| |||||||||||||||||    
T  48930728 gaaaaaacttgatgtatgtgaaaatcacttatttagattgaaa 48930686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 5078539 - 5078632
Alignment:
Q  31 aaaaactagatatatgtgaaaataacttatttagattgaaat-atagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaa 123  Q
    ||||||| ||||||||| ||||| |||||||||||| ||||| || |||| ||||||| ||| || |||||  ||||||| || ||||| ||||    
T  5078539 aaaaacttgatatatgtaaaaatcacttatttagatcgaaataatggagagaaagatgcagaggggtgattctaggtcaaaaaatgacctaaaa 5078632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 17223091 - 17223136
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttattt 62  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||||    
T  17223091 gaaatcacaaagaaaaaacctagatctatgtgaaaatcacttattt 17223136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 377 - 426
Target Start/End: Complemental strand, 19987308 - 19987259
Alignment:
Q  377 tgtacacataacttatttataattttttaataataatacataataagtac 426  Q
    ||||||||| | | |||||||||||||||||| || ||||||||||||||    
T  19987308 tgtacacatcattcatttataattttttaatagtagtacataataagtac 19987259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 379 - 460
Target Start/End: Complemental strand, 31330541 - 31330460
Alignment:
Q  379 tacacataacttatttataattttttaataataatacataataagtactcaatccctgcaattcaacatctaacataaattt 460  Q
    ||||||| ||| |||||||||||||||||  || ||| ||||||| ||||||||||| |||  |||||| | ||| ||||||    
T  31330541 tacacatcactcatttataattttttaatggtagtacctaataagcactcaatccctccaacccaacatttcacacaaattt 31330460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 377 - 422
Target Start/End: Original strand, 33719480 - 33719525
Alignment:
Q  377 tgtacacataacttatttataattttttaataataatacataataa 422  Q
    |||| |||||||| ||||||||| ||||||||||||||| ||||||    
T  33719480 tgtagacataactcatttataatattttaataataatacttaataa 33719525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 389 - 422
Target Start/End: Original strand, 34809527 - 34809560
Alignment:
Q  389 ttatttataattttttaataataatacataataa 422  Q
    ||||||||||||||||||||||||||| ||||||    
T  34809527 ttatttataattttttaataataatacttaataa 34809560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 47590263 - 47590218
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||| ||||||| ||||||||||||||  |||||||||||||||||    
T  47590263 aaaggaaaaacttgatatatgtgaaaaccacttatttagattgaaa 47590218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 48061375 - 48061330
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||||| |||| |||||||||  |||||||||||||||||    
T  48061375 aaagaaaaaacttgatagatgtgaaaaccacttatttagattgaaa 48061330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 1e-43; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 19876203 - 19876042
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||||||||||||||| | ||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||  | |||||||||||||||||||    
T  19876203 gaaatcacaaagaaaaaaccttgatctatgtgaaaatcacttatttagattgaaatattgagaaaaagatgaagatgagtaatttcaggtcaagaattga 19876104  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaacttagagagaaaactagggccggctt 181  Q
    |||||||| || |||| || |||||||   |||||||||| ||||||||||| ||||||||||||    
T  19876103 cccaaaaccacccctcaatagaaaatc---aagagaaaacctagagagaaaattagggccggctt 19876042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 44100026 - 44100191
Alignment:
Q  19 aaatcacaaagaaaaaact-agatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgac 117  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |||    
T  44100026 aaatcacaaagaaaaaacttagatctatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagaggggtgattttaggtcaagaatcgac 44100125  T
Q  118 ccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggctt 181  Q
    ||||||| || |||| ||| | || |   |||||||||| |  |||||||||||||||||||||||    
T  44100126 ccaaaaccacccctcaatgaagaaaccgaaagagaaaacctagagagagaaaactagggccggctt 44100191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 11196881 - 11196717
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  11196881 gaaatcaaaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaata--gagaaaaagatgaagatggatgatttcaggtcaagaattga 11196784  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggctt 181  Q
    |||||||| || |||| | | | || |||||||||||||  |  |||||||||||||||||| ||||    
T  11196783 cccaaaaccacccctcaacgaagaaactagaagagaaaaactagagagagaaaactagggccagctt 11196717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 11725673 - 11725506
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||| ||||||||||| ||||| ||||||||||  ||||||||||||||||||| ||||||||||| ||||| || |||||||||||||||||||||    
T  11725673 gaaatcaaaaagaaaaaacctagatctatgtgaaaaacacttatttagattgaaataaagagaaaaagacgaagaggggtgatttcaggtcaagaattga 11725574  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggctta 182  Q
    |||||||| || |||| ||| | || ||  |||||||||  |  ||||||||||||||||||||||||    
T  11725573 cccaaaaccacccctcaatgaagaaactgaaagagaaaatctagagagagaaaactagggccggctta 11725506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 2655862 - 2655753
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||| ||||||||||||   |||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||    
T  2655862 gaaattacaaagaaaaaaaatctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatgggtgattgcaggtcaagaatt 2655763  T
Q  115 gacccaaaac 124  Q
    ||||||||||    
T  2655762 gacccaaaac 2655753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 33342429 - 33342264
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaa-taacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    |||||||| |||||||||| ||||| |||||||||| | |||||||||||||||| || ||| |||| |||||||| || ||||||||||| || |||||    
T  33342429 gaaatcacgaagaaaaaacctagatctatgtgaaaaatcacttatttagattgaattagagaaaaaaggatgaagaggggtgatttcaggttaaaaattg 33342330  T
Q  116 acccaaaacaactcctcgatggaaaatctagaagagaaaacttagagagaaaactagggccggctt 181  Q
    ||||||||| || |||| ||| | || || ||||| ||||| ||||||||||||||||||||||||    
T  33342329 acccaaaaccacccctcaatgaagaaactcgaagaaaaaacctagagagaaaactagggccggctt 33342264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 34611796 - 34611676
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||||  |||||| ||||||||||| ||||||||||| ||||||| | ||||||| |||||||||  ||||||||||||||||||||    
T  34611796 gaaatcacaaagaaaaaaacctagatttatgtgaaaatcacttatttagactgaaatagaaagaaaaatatgaagatgagtgatttcaggtcaagaattg 34611697  T
Q  116 acccaaaacaactcctcgatg 136  Q
    ||||||||| || ||||||||    
T  34611696 acccaaaaccacccctcgatg 34611676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 14907036 - 14907123
Alignment:
Q  36 ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaa 123  Q
    |||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  14907036 ctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatgggtgatttcaggtcaagaattgatccaaaa 14907123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 9619464 - 9619558
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaac 124  Q
    ||||| ||| || ||||||||||| ||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||||||||||||    
T  9619464 aaaaatctaaatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaaac 9619558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 44578028 - 44577867
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||| ||||||||||||  |||||| |||||| |||| ||||| ||||||||||||| ||||||||||||||||| |  |||||| ||||||| |||||    
T  44578028 gaaattacaaagaaaaaaacctagatctatgtgtaaatcacttagttagattgaaatagagagaaaaagatgaagaggagtgattttaggtcaaaaattg 44577929  T
Q  116 acccaaaacaactcctcgatggaaaatctagaagagaaaacttagagagaaaactagggccg 177  Q
    ||||||||| || |||| ||| | || |   |||||||||| ||||||||||||||||||||    
T  44577928 acccaaaaccacccctcaatgaagaaacagtaagagaaaacctagagagaaaactagggccg 44577867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 42448119 - 42448283
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||||||||||||| ||   |||||| ||| || |||| ||||||||||||||||||| ||||||||||||||||| || |||||||||||||||||||    
T  42448119 gaaatcacaaagaaacaaaacctagatctatatgtaaatcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtcaagaatt 42448218  T
Q  115 gacccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccg 177  Q
     ||||||||| || |||| |||  ||| ||  |||| ||||| |  |||||||||||||||||||    
T  42448219 aacccaaaaccacccctcaatgacaaaactgtaagacaaaacctagagagagaaaactagggccg 42448283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 4808956 - 4808848
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||| ||||||||||||  |||||| ||||||||||| ||||||||| ||||||||| ||| ||||||||||||| || | ||||||||||||||||||    
T  4808956 gaaattacaaagaaaaaaagctagatctatgtgaaaatcacttatttacattgaaataaagaaaaaaagatgaagaggggtaatttcaggtcaagaattg 4808857  T
Q  116 acccaaaac 124  Q
    |||||||||    
T  4808856 acccaaaac 4808848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 9072710 - 9072601
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||||||||||||||||   |||||| ||||||||| | ||||||||| ||||||||| ||||||||||||||||| || |||||||| ||||| ||||    
T  9072710 gaaatcacaaagaaaaaaaatctagatttatgtgaaagtcacttatttaaattgaaatagagagaaaaagatgaagaggggtgatttcaagtcaaaaatt 9072611  T
Q  115 gacccaaaac 124  Q
    ||||||||||    
T  9072610 gacccaaaac 9072601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 35580449 - 35580342
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    |||||||| |||||||||| ||||| ||||||||||| ||||||||| ||||||||| |||||||||||||||||||  |||||| | ||||| ||||||    
T  35580449 gaaatcacgaagaaaaaacctagatctatgtgaaaatcacttatttaaattgaaatagagagaaaaagatgaagatgagtgattttatgtcaaaaattga 35580350  T
Q  117 cccaaaac 124  Q
    ||||||||    
T  35580349 cccaaaac 35580342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 30 - 177
Target Start/End: Original strand, 9498708 - 9498856
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaacaactc 129  Q
    ||||| ||| || ||||||||||| ||||||||||||||||||| ||| ||||||||||||| || ||||||||||| ||||||||||||||||| || |    
T  9498708 aaaaacctaaatctatgtgaaaatcacttatttagattgaaataaagataaaaagatgaagaggggtgatttcaggt-aagaattgacccaaaaccaccc 9498806  T
Q  130 ctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccg 177  Q
    ||| ||| | ||  |  |||||||||| |  |||||||||||||||||||    
T  9498807 ctcaatgaagaaattgtaagagaaaacctagagagagaaaactagggccg 9498856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 17949239 - 17949132
Alignment:
Q  18 gaaatcacaaagaaaaaact--agatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||| |||||| |  |||| |||||||||||  |||||||||||||||||| |||||||||| |||||| || |||||||||||||| |||||    
T  17949239 gaaatcacaaataaaaaaatcaagatctatgtgaaaatcgcttatttagattgaaatagagagaaaaaggtgaagaggggtgatttcaggtcaataattg 17949140  T
Q  116 acccaaaa 123  Q
    ||||||||    
T  17949139 acccaaaa 17949132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 33896074 - 33895906
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||||||||||||||||   |||||| ||||||||| | ||||||||||||| ||||| ||||||||||||||||| || ||| || || |||||||||    
T  33896074 gaaatcacaaagaaaaaaaacctagatctatgtgaaagtcacttatttagatttaaatagagagaaaaagatgaagaggggtgactttagatcaagaatt 33895975  T
Q  115 gacccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggctta 182  Q
    |||||||||| || || | ||| | || |  ||||||||||| |  |||||||||| |||||||||||||    
T  33895974 gacccaaaaccac-ccccaatgaagaaacgcgaagagaaaacctagagagagaaaattagggccggctta 33895906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 43890216 - 43890385
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||| ||||||||||||   |||||| ||||| ||||| |||||||||||||||| || ||||||||||||||||| || |||||||||||||| || |    
T  43890216 gaaattacaaagaaaaaaaatctagatctatgtcaaaatcacttatttagattgaattaaagagaaaaagatgaagaggggtgatttcaggtcaaaaaat 43890315  T
Q  115 gacccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggctta 182  Q
    || ||||||| || |||| ||| | ||  |  |||||||||| |  ||||||||||||||||||| ||||    
T  43890316 gatccaaaaccacccctcaatgaagaaattgtaagagaaaacctagagagagaaaactagggccgactta 43890385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 16794284 - 16794185
Alignment:
Q  18 gaaatcacaaagaaaaaactagatatatgtgaaaa-taacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    |||||||| |||||||| |||||| |||||||||| | |||||||||||||||| || |||||||||||||||||||| |||||||| ||||| ||||||    
T  16794284 gaaatcacgaagaaaaacctagatttatgtgaaaaatcacttatttagattgaattagagagaaaaagatgaagatgggtgatttcaagtcaaaaattga 16794185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 31 - 168
Target Start/End: Complemental strand, 28239811 - 28239672
Alignment:
Q  31 aaaaactagatatatgtgaaaata-acttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaa-caact 128  Q
    |||| |||||| |||||||||| | ||||||||||||||||||| |||||||||||||||||  | |||||||||||||| ||||||||||||| || |     
T  28239811 aaaacctagatctatgtgaaaaaacacttatttagattgaaatagagagaaaaagatgaagagaggtgatttcaggtcaaaaattgacccaaaatcaccc 28239712  T
Q  129 cctcgatggaaaatctagaagagaaaacttagagagaaaa 168  Q
    |||| ||| | ||  | ||||||||||| |||||||||||    
T  28239711 cctcaatgaagaaaatggaagagaaaacctagagagaaaa 28239672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 18 - 168
Target Start/End: Original strand, 27747205 - 27747356
Alignment:
Q  18 gaaatcacaaagaaaaaact-agatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    |||||||| ||||||||||| | || ||||||||||| ||||||||| ||||||||  ||| |||||||||||||  | |||||||| ||||| ||||||    
T  27747205 gaaatcacgaagaaaaaacttatatttatgtgaaaattacttatttaaattgaaatggagataaaaagatgaagaatggtgatttcaagtcaaaaattga 27747304  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaacttagagagaaaa 168  Q
    |||||||| || |||  ||| | ||  | ||||||||||| |||||||||||    
T  27747305 cccaaaactaccccttaatgaagaagttggaagagaaaacctagagagaaaa 27747356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 18 - 168
Target Start/End: Original strand, 15597259 - 15597411
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatata-gagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    |||||||  |||||||||| ||||| ||||||||||| ||||||||||||||||||  |  ||||||||||||||| || |||||||||||||| |||||    
T  15597259 gaaatcatgaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatggactagaaaaagatgaagaggggtgatttcaggtcaaaaattg 15597358  T
Q  116 acccaaaacaactcctcgatggaaaatctagaagagaaaacttagagagaaaa 168  Q
    ||  ||||| || |||| ||  |||  || ||||||||||| || ||||||||    
T  15597359 actgaaaaccacccctcaataaaaatactggaagagaaaacctatagagaaaa 15597411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 56 - 129
Target Start/End: Complemental strand, 29777181 - 29777108
Alignment:
Q  56 cttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaacaactc 129  Q
    |||||||||||||||||| ||||||||||||||||| |  |||||||| ||||| |||||||||||||| ||||    
T  29777181 cttatttagattgaaatagagagaaaaagatgaagaggagtgatttcatgtcaataattgacccaaaaccactc 29777108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 11464163 - 11464056
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||| ||||||||||||   |||||| ||||||||||| ||||||| | ||||||||| |||||| ||  |||||| || |||||||||||||||||||    
T  11464163 gaaattacaaagaaaaaaaatctagatctatgtgaaaatcacttattcaaattgaaataaagagaagaa--tgaagaggggtgatttcaggtcaagaatt 11464066  T
Q  115 gacccaaaac 124  Q
    |||| |||||    
T  11464065 gacctaaaac 11464056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 124
Target Start/End: Original strand, 32724595 - 32724689
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaa-ttgacccaaaac 124  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||    |||||||||||||| || ||||||||||||    
T  32724595 aaaaatctagatctatgtgaaaatcacttatttagattgaaatagagag-aaaagatgaagagaagtgatttcaggtcaataatttgacccaaaac 32724689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 37565971 - 37566079
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatataga-gaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    |||||| |||||||||||  ||| || ||||||||||| | ||||||||||||||||| |||  ||||| ||||||| || ||||||||| |||| ||||    
T  37565971 gaaatctcaaagaaaaaaacctaaatctatgtgaaaatcaattatttagattgaaatagagataaaaaaaatgaagaagggtgatttcagatcaataatt 37566070  T
Q  115 gacccaaaa 123  Q
    |||||||||    
T  37566071 gacccaaaa 37566079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 12173491 - 12173386
Alignment:
Q  18 gaaatcacaaagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgac 117  Q
    |||||||  ||||||||||||||   |||| | ||  |||||||| |||||||||| ||| |||||||| ||||||| |||||||||||||| | |||||    
T  12173491 gaaatcatgaagaaaaaactagaaccatgtaagaaacacttattttgattgaaatagaga-aaaaagataaagatgggtgatttcaggtcaaaagttgac 12173393  T
Q  118 ccaaaac 124  Q
    |||||||    
T  12173392 ccaaaac 12173386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 12417919 - 12417814
Alignment:
Q  18 gaaatcacaaagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgac 117  Q
    |||||||  ||||||||||||||   |||| | ||  |||||||| |||||||||| ||| |||||||| ||||||| |||||||||||||| | |||||    
T  12417919 gaaatcatgaagaaaaaactagaaccatgtaagaaacacttattttgattgaaatagaga-aaaaagataaagatgggtgatttcaggtcaaaagttgac 12417821  T
Q  118 ccaaaac 124  Q
    |||||||    
T  12417820 ccaaaac 12417814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 363 - 432
Target Start/End: Complemental strand, 29811588 - 29811519
Alignment:
Q  363 aaatagattttacgtgtacacataacttatttataattttttaataataatacataataagtactcaatc 432  Q
    |||||||||| |||| ||| ||||| ||||||||||||||||||||||| || |||||||  ||||||||    
T  29811588 aaatagatttcacgtatactcataatttatttataattttttaataatagtaaataataaacactcaatc 29811519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 31013700 - 31013753
Alignment:
Q  18 gaaatcacaaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    ||||||||||| ||||||||||||| |||||||||  |||||||||||||||||    
T  31013700 gaaatcacaaaaaaaaaactagatagatgtgaaaaccacttatttagattgaaa 31013753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 16644539 - 16644491
Alignment:
Q  27 aagaaaaaactagatatatgtgaaaataacttatttagattgaaatata 75  Q
    ||||||||||| ||| |||||||||||| ||||||||||||||||||||    
T  16644539 aagaaaaaacttgatctatgtgaaaatagcttatttagattgaaatata 16644491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 168
Target Start/End: Complemental strand, 33298847 - 33298693
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatag----agaaaaagatgaagatggatgatttcaggtcaagaa 112  Q
    ||||||||||||  ||||| ||||| ||||||||||| |||||||||||||||| || ||    | |||||||||||||| | || |||||| |||| ||    
T  33298847 gaaatcacaaaggtaaaacctagatctatgtgaaaatcacttatttagattgaattagagaaaaataaaaagatgaagataggtgttttcagctcaa-aa 33298749  T
Q  113 ttgacccaaaacaactcctcgatggaaaatctagaagagaaaacttagagagaaaa 168  Q
     | || |||||| || |||  ||| | || || |||||||||||||||||||||||    
T  33298748 ataactcaaaaccacaccttaatgaagaagctggaagagaaaacttagagagaaaa 33298693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 363 - 449
Target Start/End: Complemental strand, 38937955 - 38937869
Alignment:
Q  363 aaatagattttacgtgtacacataacttatttataattttttaataataatacataataagtactcaatccctgcaattcaacatct 449  Q
    |||| ||| ||| ||||||| || |||||||||||||||||||||| | | || ||||||| ||||||||||| |||  ||||||||    
T  38937955 aaatggatcttatgtgtacatatcacttatttataattttttaatagtgacacctaataagaactcaatccctccaacacaacatct 38937869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 26469338 - 26469379
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||| ||||||||||||||| |||||||||||||||||    
T  26469338 aaaaaacttgatatatgtgaaaatcacttatttagattgaaa 26469379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 43192438 - 43192503
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaa 82  Q
    |||||||| |||||||||| ||||| ||||| ||||  ||||||||||||||||||| ||||||||    
T  43192438 gaaatcacgaagaaaaaacctagatctatgtaaaaaccacttatttagattgaaatagagagaaaa 43192503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 440
Target Start/End: Original strand, 2603060 - 2603111
Alignment:
Q  389 ttatttataattttttaataataatacataataagtactcaatccctgcaat 440  Q
    |||||||||||||||||||| || ||  ||||||||||||||||||| ||||    
T  2603060 ttatttataattttttaatagtagtatctaataagtactcaatccctccaat 2603111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 12184265 - 12184209
Alignment:
Q  28 agaaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagat 86  Q
    |||||||||||||  ||||||||||  ||||||||||||||||  ||||||||||||||    
T  12184265 agaaaaaactagagctatgtgaaaaacacttatttagattgaa--atagagaaaaagat 12184209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 86
Target Start/End: Complemental strand, 12428693 - 12428637
Alignment:
Q  28 agaaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagat 86  Q
    |||||||||||||  ||||||||||  ||||||||||||||||  ||||||||||||||    
T  12428693 agaaaaaactagagctatgtgaaaaacacttatttagattgaa--atagagaaaaagat 12428637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 101
Target Start/End: Complemental strand, 36532876 - 36532805
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgattt 101  Q
    ||||| ||| |||||||||||||   |||||||| ||||||||| ||| ||||| || ||||||||||||||    
T  36532876 aaaaacctaaatatatgtgaaaactccttatttaaattgaaatagagataaaaaaattaagatggatgattt 36532805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 374 - 432
Target Start/End: Original strand, 5535766 - 5535824
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataataatacataataagtactcaatc 432  Q
    |||||||||||| ||| |||||||||||||||||| || ||| | ||||| ||||||||    
T  5535766 acgtgtacacatcactcatttataattttttaatattagtaccttataagcactcaatc 5535824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 380 - 430
Target Start/End: Original strand, 14728896 - 14728946
Alignment:
Q  380 acacataacttatttataattttttaataataatacataataagtactcaa 430  Q
    |||||| |||| || ||||||||||||||||||||| ||||| ||||||||    
T  14728896 acacatcactttttaataattttttaataataatacttaataggtactcaa 14728946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 374 - 408
Target Start/End: Original strand, 18806541 - 18806575
Alignment:
Q  374 acgtgtacacataacttatttataattttttaata 408  Q
    |||||||||||| ||||||||||||||||||||||    
T  18806541 acgtgtacacatcacttatttataattttttaata 18806575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 380 - 430
Target Start/End: Original strand, 30905537 - 30905587
Alignment:
Q  380 acacataacttatttataattttttaataataatacataataagtactcaa 430  Q
    ||||||||||| |||||||||||||||||||| ||| ||||| ||| ||||    
T  30905537 acacataacttttttataattttttaataatagtacctaataggtattcaa 30905587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 31 - 69
Target Start/End: Original strand, 40619215 - 40619253
Alignment:
Q  31 aaaaactagatatatgtgaaaataacttatttagattga 69  Q
    ||||||| ||||||||||||||| |||||||||||||||    
T  40619215 aaaaacttgatatatgtgaaaatcacttatttagattga 40619253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 3240328 - 3240283
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||| ||| |||||||||| |||| |||||||||||||||||    
T  3240328 aaagaaaacacttgatatatgtggaaatcacttatttagattgaaa 3240283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 379 - 408
Target Start/End: Complemental strand, 5217922 - 5217893
Alignment:
Q  379 tacacataacttatttataattttttaata 408  Q
    ||||||||||||||||||||||||||||||    
T  5217922 tacacataacttatttataattttttaata 5217893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 20559883 - 20559928
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||| ||||||| |||| |||||||||| |||||||||||||||||    
T  20559883 aaaggaaaaacttgatagatgtgaaaatcacttatttagattgaaa 20559928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 20571445 - 20571490
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||| ||||||| |||| |||||||||| |||||||||||||||||    
T  20571445 aaaggaaaaacttgatagatgtgaaaatcacttatttagattgaaa 20571490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 377 - 430
Target Start/End: Original strand, 31226445 - 31226498
Alignment:
Q  377 tgtacacataacttatttataattttttaataataatacataataagtactcaa 430  Q
    ||||||||| ||| |||||||||||||||||| || ||| |||||| |||||||    
T  31226445 tgtacacatcactcatttataattttttaatagtagtacctaataaatactcaa 31226498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 378 - 427
Target Start/End: Original strand, 37673733 - 37673782
Alignment:
Q  378 gtacacataacttatttataattttttaataataatacataataagtact 427  Q
    |||||||| ||| |||||||||||||||||| || ||| |||||||||||    
T  37673733 gtacacatcactcatttataattttttaatagtagtacctaataagtact 37673782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 3e-41; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 18 - 155
Target Start/End: Complemental strand, 781376 - 781239
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||||||||||||| | ||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  781376 gaaatcacaaagaaaaaccctagatctatctgaaaatcacttatttagattgaaatatagagaaaaagatgaagatgggtgatttcaggtcaagaattga 781277  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaa 155  Q
     ||||||| || ||||||||||||||||| |||| ||||    
T  781276 accaaaaccac-cctcgatggaaaatctaaaagaaaaaa 781239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 21 - 165
Target Start/End: Original strand, 21060377 - 21060522
Alignment:
Q  21 atcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgaccc 119  Q
    ||||| |||||||||| || || ||||||||||| |||||||||||||||||||||||||||||||||||||  | ||||||||| ||||||||||||||    
T  21060377 atcacgaagaaaaaacctacatctatgtgaaaatcacttatttagattgaaatatagagaaaaagatgaagagtggtgatttcagatcaagaattgaccc 21060476  T
Q  120 aaaacaactcctcgatggaaaatctagaagagaaaacttagagaga 165  Q
    ||||| ||  ||||||| ||||||||||||||||||| ||||||||    
T  21060477 aaaaccaccactcgatgaaaaatctagaagagaaaacctagagaga 21060522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 7887030 - 7887196
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||| ||||||||||| ||||| ||||||||||| ||||||||||||| ||||| |||| |||||| ||||| ||||||||||||||||||||| ||    
T  7887030 gaaatcaaaaagaaaaaacatagatttatgtgaaaatcacttatttagattaaaatagagaggaaaagacgaagagggatgatttcaggtcaagaatgga 7887129  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaacttag--agagaaaactagggccggctt 181  Q
    |||||||| || |||||||| | || || |||||||||| ||||  |||||||||||||||||||||    
T  7887130 cccaaaaccacccctcgatgaagaaactggaagagaaaagttagaaagagaaaactagggccggctt 7887196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 30 - 168
Target Start/End: Original strand, 20257800 - 20257938
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaacaactc 129  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||| ||||||||||| | ||||||||||||||||||||| |||||||| ||||| || |    
T  20257800 aaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaagaagtagatggatgatttcaggtcaaaaattgaccaaaaactaccc 20257899  T
Q  130 ctcgatggaaaatctagaagagaaaacttagagagaaaa 168  Q
    ||||||| |||  |||||||||||||||||| |||||||    
T  20257900 ctcgatgaaaacactagaagagaaaacttagggagaaaa 20257938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 35475429 - 35475571
Alignment:
Q  18 gaaatcacaaagaaaaaa-ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    |||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||| || ||||||||||  | ||||||||| ||||||||| |    
T  35475429 gaaatcacaaagaaaaaatctagatctatgtgaaaatcacttatttagattgaaatatagataacaagatgaagagaggtgatttcagatcaagaattaa 35475528  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaactta 159  Q
    |||||||  || |||| ||||||||||||||||||||||||||    
T  35475529 cccaaaatcacccctcaatggaaaatctagaagagaaaactta 35475571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 27266951 - 27267115
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||||||||||||||||   |||||| ||||||||||| ||||||||||||||||||| ||||||||| ||||||| || |||||||||||||||||||    
T  27266951 gaaatcacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagagaaaaatatgaagaggggtgatttcaggtcaagaatt 27267050  T
Q  115 gacccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccg 177  Q
    |||||||||| || | ||| || | || |  ||||||||||| |  |||||||||||||||||||    
T  27267051 gacccaaaaccacccttcggtgaagaaacgggaagagaaaacctagagagagaaaactagggccg 27267115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 19 - 168
Target Start/End: Original strand, 36344583 - 36344733
Alignment:
Q  19 aaatcacaaagaaaaaact-agatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgac 117  Q
    ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||| |||    
T  36344583 aaatcacaaagaaaaaacttagatccatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagaggggtgattttaggtcaagaatcgac 36344682  T
Q  118 ccaaaacaactcctcgatggaaaatctagaagagaaaacttagagagaaaa 168  Q
     |||||| || |||| ||| | ||  | ||||||||||  |||||||||||    
T  36344683 tcaaaaccacccctcaatgaagaaattggaagagaaaatctagagagaaaa 36344733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 34881683 - 34881535
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaacaactc 129  Q
    |||||||||||| ||||||||||| ||||||||||||||||||| |||| ||||||||||||  | ||||||||||||||||||||||||| ||| || |    
T  34881683 aaaaaactagatctatgtgaaaatcacttatttagattgaaatagagag-aaaagatgaagagaggtgatttcaggtcaagaattgacccagaaccaccc 34881585  T
Q  130 ctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccg 177  Q
    ||| ||||| || ||  |||||||||| |  |||||||||||||||||||    
T  34881584 ctcaatggagaaactgtaagagaaaacctggagagagaaaactagggccg 34881535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 7241770 - 7241603
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||||  |||||| ||||||||| | ||||||||||||||||||| ||||||||||||||||| || || |||||||| ||||||||    
T  7241770 gaaatcacaaagaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtggtttcaggttaagaattg 7241671  T
Q  116 acccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggctt 181  Q
    ||||||||| || || | ||| | || |  ||||||||||| |  |||||||||| ||||||||||||    
T  7241670 acccaaaaccaccccccaatgaagaaacgggaagagaaaacctagagagagaaaattagggccggctt 7241603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 7246946 - 7246779
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||||  |||||| ||||||||| | ||||||||||||||||||| ||||||||||||||||| || || |||||||| ||||||||    
T  7246946 gaaatcacaaagaaaaaaacctagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtggtttcaggttaagaattg 7246847  T
Q  116 acccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggctt 181  Q
    ||||||||| || || | ||| | || |  ||||||||||| |  |||||||||| ||||||||||||    
T  7246846 acccaaaaccaccccccaatgaagaaacgggaagagaaaacctagagagagaaaattagggccggctt 7246779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 10649427 - 10649334
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaa 123  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||    
T  10649427 aaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaagaattgacccaaaa 10649334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 19 - 123
Target Start/End: Original strand, 43261912 - 43262016
Alignment:
Q  19 aaatcacaaagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacc 118  Q
    ||||||||||| |||| |||||| ||||||||||| ||||||||||||||||||| ||| |||||||||||||||| ||||||||||| ||||||||||     
T  43261912 aaatcacaaaggaaaacctagatctatgtgaaaatcacttatttagattgaaatagagataaaaagatgaagatgggtgatttcaggttaagaattgact 43262011  T
Q  119 caaaa 123  Q
    |||||    
T  43262012 caaaa 43262016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 18677557 - 18677666
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||||||||||||||||   |||||| ||||||||||| ||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||| ||||    
T  18677557 gaaatcacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattaaaatagagagaaaaagatgaagagggatgatttcagatcaataatt 18677656  T
Q  115 gacccaaaac 124  Q
    ||||||||||    
T  18677657 gacccaaaac 18677666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 19281037 - 19281144
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||||||||||||||| ||||||| ||||||| | ||||||||||||||||||| |||||||||||||||||||| ||||||| |||||| |||| |    
T  19281037 gaaatcacaaagaaaaaacctagatatgtgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagatgggtgatttccggtcaaaaattta 19281136  T
Q  117 cccaaaac 124  Q
    ||||||||    
T  19281137 cccaaaac 19281144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 18 - 177
Target Start/End: Complemental strand, 30371713 - 30371549
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    ||||| ||||||||||||   |||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||| || ||||||||||||||  |||    
T  30371713 gaaattacaaagaaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgatttcaggtcaaatatt 30371614  T
Q  115 gacccaaaacaactcctcgatggaaaatctagaagagaaaacttag--agagaaaactagggccg 177  Q
    |||||||||| || |||| ||| | ||  |  |||||||||| |||  |||||||||||||||||    
T  30371613 gacccaaaaccacccctcaatgaagaaattgtaagagaaaacctagatagagaaaactagggccg 30371549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 30 - 124
Target Start/End: Complemental strand, 26578223 - 26578129
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaac 124  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||| |||||    
T  26578223 aaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagatgagtgatttcaggtcaagaattgaccaaaaac 26578129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 16981277 - 16981173
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||| ||||||||| ||||||| |  |||||||||||||||||||||    
T  16981277 gaaatcacaaagaaaaaacctagatatatgtgtaaatcacttatttagattgaaatagagagaaaaatatgaagaggagtgatttcaggtcaagaattga 16981178  T
Q  117 cccaa 121  Q
     ||||    
T  16981177 tccaa 16981173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 28235572 - 28235465
Alignment:
Q  18 gaaatcacaaagaaaaaa-ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    |||||||||||||||||| |||||| ||||||||||| |||||||||||| |||||| | ||||||||||||||| || ||||||||||||||  |||||    
T  28235572 gaaatcacaaagaaaaaatctagatctatgtgaaaatcacttatttagatcgaaatagaaagaaaaagatgaagaggggtgatttcaggtcaatgattga 28235473  T
Q  117 cccaaaac 124  Q
    ||||||||    
T  28235472 cccaaaac 28235465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 27751913 - 27751735
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagaga-----------aaaagatgaagatg-gatgatttcag 104  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||||| ||||||||||||| |           |||||||||||| | | |||||||||    
T  27751913 gaaatcacaaagaaaaaacctagatctatgtgaaaatcacttatttatattgaaatatagaaagaaagaaaaaaaaaagatgaagaggaggtgatttcag 27751814  T
Q  105 gtcaagaattgacccaaaacaactcctcgatggaaaatctagaagagaaaac--ttagagagaaaactagggccggctt 181  Q
    |||||||||||||||||||| || |||| |||||||||  ||||||||||||   ||||| ||||||||||||||||||    
T  27751813 gtcaagaattgacccaaaaccacccctcaatggaaaattaagaagagaaaacctatagagggaaaactagggccggctt 27751735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 2057930 - 2058027
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaat 113  Q
    ||||||| ||||||||||  |||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||| || |||||| |||||||||||    
T  2057930 gaaatcataaagaaaaaaacctagatctatgtgaaaatcacttatttagattgaaataaagagaaaaagatgaagaggggtgattttaggtcaagaat 2058027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 7150427 - 7150535
Alignment:
Q  18 gaaatcacaaagaaaaaac--tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    |||| |||||||||||||   ||||| ||||||||| | ||||||||||||||||||| ||||||||||||||||| || |||||||||||||| ||||     
T  7150427 gaaagcacaaagaaaaaaacttagatctatgtgaaagtcacttatttagattgaaatagagagaaaaagatgaagaggggtgatttcaggtcaaaaatta 7150526  T
Q  116 acccaaaac 124  Q
    | |||||||    
T  7150527 atccaaaac 7150535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 43148718 - 43148610
Alignment:
Q  18 gaaatcacaaagaaaaaa--ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||||  ||| |||||||||||| | |||||||||||| |||||| |||||||| |||||| ||| || |||| | |||||||||||    
T  43148718 gaaatcacaaagaaaaaaatctaaatatatgtgaaagtcacttatttagatcgaaatagagagaaaaggatgaaaatgaataattttaagtcaagaattg 43148619  T
Q  116 acccaaaac 124  Q
    |||||||||    
T  43148618 acccaaaac 43148610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 49 - 124
Target Start/End: Complemental strand, 11767762 - 11767687
Alignment:
Q  49 aaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaac 124  Q
    ||||| |||||||||||||||||||||||||||||||||||||  |||||||| ||||||| |||||||| |||||    
T  11767762 aaaatcacttatttagattgaaatatagagaaaaagatgaagacagatgattttaggtcaaaaattgacctaaaac 11767687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 37 - 181
Target Start/End: Original strand, 19259925 - 19260067
Alignment:
Q  37 tagatatatgtgaaaa-taacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaacaactcctcgat 135  Q
    ||||| |||||||||| | ||||||||||||||||||| |||||||||   |||   || ||||||||||||||||||||||||||||| || |||| |     
T  19259925 tagatctatgtgaaaaatcacttatttagattgaaatagagagaaaaa---gaattggggtgatttcaggtcaagaattgacccaaaaccacccctcaac 19260021  T
Q  136 ggaaaatctagaagagaaaacttagagagaaaactagggccggctt 181  Q
    | | || |   |||||||||| ||||||||||| ||||||||||||    
T  19260022 gaagaaaccgtaagagaaaacctagagagaaaattagggccggctt 19260067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 30 - 181
Target Start/End: Complemental strand, 42579854 - 42579698
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaaga---tgaagatggatgatttcaggtcaagaattgacccaaaacaa 126  Q
    ||||| ||| || ||||||||||| ||||||||||||||||||| | ||||||| |   |||| | || |||||||| ||||| |||||||||||||| |    
T  42579854 aaaaacctaaatctatgtgaaaatcacttatttagattgaaatagaaagaaaaaaaaaatgaaaaggggtgatttcatgtcaataattgacccaaaacca 42579755  T
Q  127 ctcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggctt 181  Q
    | |||| ||||| || ||  |||||||||| |  ||||||||||||||||| |||||    
T  42579754 cccctcaatggagaaactgtaagagaaaacctagagagagaaaactagggcgggctt 42579698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 18 - 122
Target Start/End: Complemental strand, 15570897 - 15570791
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaa-taacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||||| || || |||||||||| | |  ||||||||||||| |||||||||||||||||||| ||||||||||| ||||| || ||    
T  15570897 gaaatcacaaagaaaaaacctacatctatgtgaaaaatcaaatatttagattgaattatagagaaaaagatgaagagggatgatttcaagtcaaaaactg 15570798  T
Q  116 acccaaa 122  Q
    || ||||    
T  15570797 actcaaa 15570791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 30298195 - 30298130
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaa 82  Q
    ||||||| ||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||    
T  30298195 gaaatcataaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatatagagaaaa 30298130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 181
Target Start/End: Original strand, 41184549 - 41184703
Alignment:
Q  24 acaaagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaa 123  Q
    ||||| ||||| |||||| |||||||||||    |||||||||||||||| |||||||| ||||||||  | |||||||| ||||| |||||||||||||    
T  41184549 acaaaaaaaaacctagatctatgtgaaaat----tatttagattgaaatagagagaaaa-gatgaagaatggtgatttcatgtcaaaaattgacccaaaa 41184643  T
Q  124 caactcctcgatggaaaatctagaagagaaaacttagag--agaaaactagggccggctt 181  Q
      |  |||| ||||| || ||  |||||||||| |||||  |||||| ||||||||||||    
T  41184644 tcatccctcaatggagaaactgtaagagaaaacctagagaaagaaaattagggccggctt 41184703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 27576442 - 27576516
Alignment:
Q  18 gaaatcacaaagaaaaaa-ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaaga 91  Q
    |||||||||||||||||| |||||| |||||||| || ||||||||| ||||||||| |||||||| ||||||||    
T  27576442 gaaatcacaaagaaaaaatctagatctatgtgaatatcacttatttacattgaaatagagagaaaaggatgaaga 27576516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 123
Target Start/End: Original strand, 3271514 - 3271606
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaa 123  Q
    |||||| ||||  ||||||||||| ||||||||||||||||| | |||| |||||||||||| |  |||||||| |||||||||||||| ||||    
T  3271514 aaaaaattagacctatgtgaaaatcacttatttagattgaaacagagag-aaaagatgaagaggagtgatttcatgtcaagaattgacctaaaa 3271606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 6445925 - 6445816
Alignment:
Q  16 cagaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaatt 114  Q
    |||||||||| |||||||||| ||||| ||||| ||||| ||||||||| ||| | ||| |||||||| ||||||||||| |||||| | || || ||||    
T  6445925 cagaaatcacgaagaaaaaacctagatctatgtaaaaatcacttatttaaattaagatagagagaaaacgatgaagatgggtgattttaagttaaaaatt 6445826  T
Q  115 gacccaaaac 124  Q
    ||| ||||||    
T  6445825 gactcaaaac 6445816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 14211187 - 14211082
Alignment:
Q  18 gaaatcacaaagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgac 117  Q
    |||||||| ||  ||||||| ||| ||||||||||| ||||||||||||||||| | || |||||||||| ||| || |||||  ||||||| |||||||    
T  14211187 gaaatcacgaaataaaaacttgatgtatgtgaaaatcacttatttagattgaaagaaagggaaaaagatgcagaggggtgattctaggtcaaaaattgac 14211088  T
Q  118 ccaaaa 123  Q
    | ||||    
T  14211087 ctaaaa 14211082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 102
Target Start/End: Original strand, 35631792 - 35631869
Alignment:
Q  27 aagaaaaaact-agatatatgtgaaaataacttatttagattgaaatatagagaaaaaga--tgaagatggatgatttc 102  Q
    ||||||||||| |||||||||| ||||| |||||||||||||||||||||| ||||||||  ||||||||| |||||||    
T  35631792 aagaaaaaacttagatatatgtaaaaatcacttatttagattgaaatatag-gaaaaagagttgaagatgggtgatttc 35631869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 8514796 - 8514857
Alignment:
Q  43 tatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcag 104  Q
    ||||||||||||| |||||| |||| ||||| |||||||||||||| || ||||||||||||    
T  8514796 tatgtgaaaataatttattttgattaaaataaagagaaaaagatgatgaaggatgatttcag 8514857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 124
Target Start/End: Complemental strand, 28097113 - 28097033
Alignment:
Q  43 tatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaac 124  Q
    ||||||||||| ||||||||| ||||||||  || ||||| ||||||||||| ||| |||||||||| ||||||| ||||||    
T  28097113 tatgtgaaaatcacttatttatattgaaattgagcgaaaa-gatgaagatgggtgaattcaggtcaaaaattgacacaaaac 28097033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 374 - 435
Target Start/End: Original strand, 41520834 - 41520895
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataataatacataataagtactcaatccct 435  Q
    |||||||||||| |||||||||||||||||||||| |  ||| ||||||| |||||||||||    
T  41520834 acgtgtacacatcacttatttataattttttaatagtggtacctaataagaactcaatccct 41520895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 374 - 435
Target Start/End: Original strand, 42551052 - 42551113
Alignment:
Q  374 acgtgtacacataacttatttataattttttaataataatacataataagtactcaatccct 435  Q
    |||||||||||| | | ||||||||||||||||||||| ||||||||||| | |||||||||    
T  42551052 acgtgtacacatcattcatttataattttttaataatagtacataataagcaatcaatccct 42551113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 382 - 435
Target Start/End: Original strand, 42951699 - 42951752
Alignment:
Q  382 acataacttatttataattttttaataataatacataataagtactcaatccct 435  Q
    |||| ||| |||||||||||| |||||||| |||||||||||||||||||||||    
T  42951699 acatcactcatttataattttgtaataatagtacataataagtactcaatccct 42951752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 2979457 - 2979551
Alignment:
Q  31 aaaaactagatatatgtgaaaataacttatttagattgaaatatagag--aaaaagatgaagatggatgatttcaggtcaagaattgacccaaaa 123  Q
    ||||||| ||| ||||||||||| ||||||||||||||||| | ||||  ||||||||| ||| || |||||  ||||||| |||||||| ||||    
T  2979457 aaaaacttgatgtatgtgaaaatcacttatttagattgaaagaaagaggaaaaaagatgcagaggggtgattataggtcaaaaattgacctaaaa 2979551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 378 - 425
Target Start/End: Complemental strand, 11200542 - 11200495
Alignment:
Q  378 gtacacataacttatttataattttttaataataatacataataagta 425  Q
    |||||||| ||| ||||||||||||||||||||||||| |||||||||    
T  11200542 gtacacatcactcatttataattttttaataataatacctaataagta 11200495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 124
Target Start/End: Complemental strand, 11192324 - 11192247
Alignment:
Q  46 gtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaac 124  Q
    |||||||| |||||||||| |||| ||| ||| |||||||| || || | |||||||||||||| ||||||||||||||    
T  11192324 gtgaaaatcacttatttag-ttgatatagagacaaaaagattaatataggtgatttcaggtcaaaaattgacccaaaac 11192247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 1582215 - 1582288
Alignment:
Q  18 gaaatcacaaagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaaga 91  Q
    ||||||||  ||||||| |||||| || |||||||| ||||||||||||| ||||  ||||||||| |||||||    
T  1582215 gaaatcacgtagaaaaagctagatctacgtgaaaatcacttatttagattaaaatggagagaaaaatatgaaga 1582288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 1602600 - 1602527
Alignment:
Q  18 gaaatcacaaagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaaga 91  Q
    ||||||||  ||||||| |||||| || |||||||| ||||||||||||| ||||  ||||||||| |||||||    
T  1602600 gaaatcacgtagaaaaagctagatctacgtgaaaatcacttatttagattaaaatggagagaaaaatatgaaga 1602527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 8096637 - 8096682
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||    
T  8096637 aaagaaaaaacttgatatatgtgaaaaccacttatttagattgaaa 8096682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 11977076 - 11977121
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||    
T  11977076 aaagaaaaaacttgatatatgtgaaaaccacttatttagattgaaa 11977121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 7036186 - 7036076
Alignment:
Q  18 gaaatcacaaa-gaaaaaactagatatatgtgaaaataacttatttagattgaaa-tatagag--aaaaagatgaagatggatgatttcaggtcaagaat 113  Q
    ||||||||||| ||||||| | ||||||||||||||  |||||||||||||||||  | ||||  ||||||||| |||||  |||||| ||||||| ||     
T  7036186 gaaatcacaaaagaaaaaaattgatatatgtgaaaaccacttatttagattgaaagaaaagaggaaaaaagatgtagatgagtgattttaggtcaaaaaa 7036087  T
Q  114 tgacccaaaac 124  Q
    ||||| |||||    
T  7036086 tgacctaaaac 7036076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 83
Target Start/End: Complemental strand, 42432888 - 42432821
Alignment:
Q  17 agaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaa 83  Q
    |||||||||||||||||||| || || ||| ||||| | |||| |||||||||||||| |||||||||    
T  42432888 agaaatcacaaagaaaaaacctaaatctatatgaaattcacttttttagattgaaatagagagaaaaa 42432821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 7613159 - 7613265
Alignment:
Q  27 aagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaa---------aagatgaagatggatgatttcaggtcaagaattgac 117  Q
    |||||||| |||||| ||| ||||||  ||||||||||||||||| | |||||||         ||||||||||||| ||||||||| | || |||||||    
T  7613159 aagaaaaacctagatctatatgaaaaacacttatttagattgaaacagagagaaaaggatgacgaagatgaagatgggtgatttcagataaaaaattgac 7613258  T
Q  118 ccaaaac 124  Q
    |||||||    
T  7613259 ccaaaac 7613265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 363 - 433
Target Start/End: Original strand, 35463188 - 35463258
Alignment:
Q  363 aaatagattttacgtgtacacataacttatttataattttttaataataatacataataagtactcaatcc 433  Q
    |||| |||| ||| |||| |||| |||  ||||||||||||||||| || ||| |||||||||||||||||    
T  35463188 aaatggattctacatgtatacatgactcgtttataattttttaatagtagtacctaataagtactcaatcc 35463258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 3166320 - 3166259
Alignment:
Q  43 tatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcag 104  Q
    |||||||||||  |||||||| ||| ||||| ||| |||||||||||||||  |||||||||    
T  3166320 tatgtgaaaattgcttatttatatttaaataaagataaaaagatgaagatgagtgatttcag 3166259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 6216848 - 6216803
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||| ||||||| ||||||||||||||  |||||||||||||||||    
T  6216848 aaaggaaaaacttgatatatgtgaaaaccacttatttagattgaaa 6216803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Complemental strand, 15571435 - 15571390
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||| ||||||| ||||||||||||||  |||||||||||||||||    
T  15571435 aaaggaaaaacttgatatatgtgaaaaccacttatttagattgaaa 15571390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 378 - 431
Target Start/End: Original strand, 18396495 - 18396548
Alignment:
Q  378 gtacacataacttatttataattttttaataataatacataataagtactcaat 431  Q
    ||||||||  || ||||||||||||||||||||| ||| |||||| ||||||||    
T  18396495 gtacacatccctcatttataattttttaataatagtacctaataaatactcaat 18396548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 24229924 - 24229969
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    ||||||| |||| |||| |||||||||| |||||||||||||||||    
T  24229924 aaagaaacaacttgatagatgtgaaaatcacttatttagattgaaa 24229969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 26878218 - 26878263
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||||||| ||| ||||||||||  |||||||||||||||||    
T  26878218 aaagaaaaaacttgatttatgtgaaaaccacttatttagattgaaa 26878263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 41749267 - 41749230
Alignment:
Q  30 aaaaaactagatatatgtgaaaataacttatttagatt 67  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  41749267 aaaaaacttgatatatgtgaaaacaacttatttagatt 41749230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 73; Significance: 6e-33; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 18 - 181
Target Start/End: Complemental strand, 8704 - 8540
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattga 116  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||| ||| ||||||||||| | || |||||||| || ||||||| |    
T  8704 gaaatcacaaagaaaaaacctagatctatgtgaaaatcacttatttagattgaaatagagataaaaagatgaaaaggggtgatttcaagttaagaattaa 8605  T
Q  117 cccaaaacaactcctcgatggaaaatctagaagagaaaacttagagagaaaactagggccggctt 181  Q
    |||||||| || |||| ||| | || || ||||||||||| | |||||||| ||| |||||||||    
T  8604 cccaaaaccacccctcaatgaagaaactggaagagaaaacctggagagaaatctaaggccggctt 8540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 5383 - 5275
Alignment:
Q  18 gaaatcacaaagaaaaaac--tagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattg 115  Q
    ||||||||||||||||||   ||||||||||| ||| | |||||||||||||||| || ||||| ||||||||||| || ||||||||||||||||||||    
T  5383 gaaatcacaaagaaaaaaacatagatatatgtaaaagtcacttatttagattgaagtagagagagaaagatgaagaggggtgatttcaggtcaagaattg 5284  T
Q  116 acccaaaac 124  Q
    |||||||||    
T  5283 acccaaaac 5275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 60; Significance: 4e-25; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 16412 - 16516
Alignment:
Q  18 gaaatcacaaagaaaaaa----ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaat 113  Q
    ||||||||||||||||||    ||| || ||||||||||| ||||||||||||||||||| ||||||| ||||||||||| ||||||| |||||||||||    
T  16412 gaaatcacaaagaaaaaaaaacctaaatctatgtgaaaatcacttatttagattgaaatagagagaaacagatgaagatgaatgattttaggtcaagaat 16511  T
Q  114 tgacc 118  Q
    |||||    
T  16512 tgacc 16516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 60; Significance: 4e-25; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 361891 - 362053
Alignment:
Q  18 gaaatcacaaagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgac 117  Q
    ||||||||||| ||||| |||  | ||||||||||| |||||||||||||||||||  |||||||||||| ||| || ||||||||||||||||||||||    
T  361891 gaaatcacaaa-aaaaacctaactctatgtgaaaattacttatttagattgaaata--gagaaaaagatggagaggggtgatttcaggtcaagaattgac 361987  T
Q  118 ccaaaacaactcctcgatggaaaatctagaagagaaaactt--agagagaaaactagggccggctt 181  Q
     |||||| || |||| ||| | || ||  |||||||||| |  ||||||||||||| |||||||||    
T  361988 tcaaaaccacccctcaatgaagaaactgtaagagaaaacctaaagagagaaaactaaggccggctt 362053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 18 - 87
Target Start/End: Original strand, 201464 - 201534
Alignment:
Q  18 gaaatcacaaagaaaaaa-ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatg 87  Q
    |||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  201464 gaaatcacaaagaaaaaatctagatctatgtgaaaatcacttatttagattgaaatatagagaaaaagatg 201534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 44 - 182
Target Start/End: Complemental strand, 6295 - 6156
Alignment:
Q  44 atgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaacaactcctcgatggaaaatc 143  Q
    |||||||||| |||||||||||||| |||| ||| ||||||||||||| || |||||| ||||||||||||||||  |||| || |||| ||| | || |    
T  6295 atgtgaaaatcacttatttagattggaatagagaaaaaaagatgaagaggggtgattttaggtcaagaattgacctgaaaccac-cctcaatgaagaaac 6197  T
Q  144 tagaagagaaaactt--agagagaaaactagggccggctta 182  Q
    | ||||||||||| |  |||||||||| |||||||||||||    
T  6196 tggaagagaaaacctaaagagagaaaattagggccggctta 6156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 158
Target Start/End: Original strand, 20517 - 20626
Alignment:
Q  47 tgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttcaggtcaagaattgacccaaaacaactcctcgatggaaaatctag 146  Q
    ||||||| ||||||||||||| || || || |||||||||||  |||| |||||||||||||| |||||| ||||||| || |||||||| | || || |    
T  20517 tgaaaatcacttatttagatttaa-tagagtgaaaaagatgacaatgggtgatttcaggtcaaaaattga-ccaaaaccacccctcgatgaagaaacttg 20614  T
Q  147 aagagaaaactt 158  Q
    ||||||||||||    
T  20615 aagagaaaactt 20626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 453917 - 453851
Alignment:
Q  18 gaaatcacaaagaaaaaac-tagatatatgtgaaaataacttatttagattgaaatatagagaaaaa 83  Q
    |||||||| |||||||||| || |||||||||||||| ||||||||| ||| ||||| |||||||||    
T  453917 gaaatcacgaagaaaaaacgtaaatatatgtgaaaatcacttatttaaattaaaataaagagaaaaa 453851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 36788 - 36864
Alignment:
Q  27 aagaaaaaactagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttca 103  Q
    |||||||||||   ||||||| ||||| ||||||||| ||||||||| |  ||||||||||||||  ||||||||||    
T  36788 aagaaaaaacttagtatatgtaaaaatcacttatttatattgaaatacaacgaaaaagatgaagacagatgatttca 36864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 165
Target Start/End: Complemental strand, 157 - 78
Alignment:
Q  86 tgaagatggatgatttcaggtcaagaattgacccaaaacaactcctcgatggaaaatctagaagagaaaacttagagaga 165  Q
    ||||||||  ||||||||||| ||||||||||||||||| || |||| ||||| || ||  |||||||||  ||||||||    
T  157 tgaagatgagtgatttcaggttaagaattgacccaaaaccacccctcaatggagaaactgtaagagaaaagctagagaga 78  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 103
Target Start/End: Original strand, 9711 - 9799
Alignment:
Q  18 gaaatcacaaagaaaaaa---ctagatatatgtgaaaataacttatttagattgaaatatagagaaaaagatgaagatggatgatttca 103  Q
    |||||||| |||||||||   |||||||||||| ||||  ||||||||| ||| ||||  |||||||||||| ||| ||||| ||||||    
T  9711 gaaatcacgaagaaaaaaaatctagatatatgtcaaaaccacttatttatattaaaatggagagaaaaagataaaggtggataatttca 9799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 1806 - 1859
Alignment:
Q  18 gaaatcacaaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||| ||  ||||||| ||| ||||||||||| |||||||||||||||||    
T  1806 gaaatcacgaaagaaaaacttgatgtatgtgaaaatcacttatttagattgaaa 1859  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 58219 - 58264
Alignment:
Q  26 aaagaaaaaactagatatatgtgaaaataacttatttagattgaaa 71  Q
    |||||||| ||| |||||||||| |||| |||||||||||||||||    
T  58219 aaagaaaacacttgatatatgtggaaatcacttatttagattgaaa 58264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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