View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3461_low_23 (Length: 239)

Name: NF3461_low_23
Description: NF3461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3461_low_23
NF3461_low_23
[»] chr4 (2 HSPs)
chr4 (19-189)||(55849419-55849590)
chr4 (69-158)||(55852054-55852144)
[»] chr1 (4 HSPs)
chr1 (49-189)||(20225520-20225661)
chr1 (19-139)||(20226820-20226942)
chr1 (190-239)||(928638-928687)
chr1 (123-188)||(20226953-20227018)
[»] chr6 (4 HSPs)
chr6 (49-189)||(9664661-9664802)
chr6 (19-190)||(3074908-3075082)
chr6 (69-189)||(787267-787388)
chr6 (54-142)||(21146854-21146941)
[»] chr3 (8 HSPs)
chr3 (49-191)||(20868673-20868818)
chr3 (69-190)||(20871312-20871436)
chr3 (17-152)||(27462144-27462279)
chr3 (54-189)||(51308791-51308926)
chr3 (115-189)||(35610797-35610871)
chr3 (49-168)||(24595226-24595346)
chr3 (71-178)||(447123-447229)
chr3 (119-189)||(51306330-51306400)
[»] chr5 (3 HSPs)
chr5 (47-189)||(27172853-27172995)
chr5 (118-190)||(39040636-39040708)
chr5 (54-96)||(37498238-37498280)
[»] chr2 (1 HSPs)
chr2 (49-189)||(26608037-26608177)
[»] chr8 (8 HSPs)
chr8 (49-189)||(12062765-12062908)
chr8 (49-158)||(35416118-35416228)
chr8 (69-189)||(369263-369384)
chr8 (118-189)||(4676130-4676201)
chr8 (118-189)||(4678075-4678146)
chr8 (49-159)||(31909128-31909237)
chr8 (67-103)||(3785838-3785874)
chr8 (67-103)||(3788548-3788584)
[»] chr7 (2 HSPs)
chr7 (56-171)||(2576998-2577111)
chr7 (68-146)||(1715751-1715828)


Alignment Details
Target: chr4 (Bit Score: 77; Significance: 7e-36; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 19 - 189
Target Start/End: Original strand, 55849419 - 55849590
Alignment:
Q  19 tgttaggaaacaaggcatctatggatgaaggagagaaaagcttaa-aatattattgtattgatgatagttgaaatgatacaagaattgaat-gatagata 116  Q
    |||||||||||| |||||| ||||||  || ||||||||||||   || | ||||||||||||||||||||||||||||||||||| |||  ||||| ||    
T  55849419 tgttaggaaacatggcatccatggatatag-agagaaaagcttgggaaaactattgtattgatgatagttgaaatgatacaagaatggaaaagataggta 55849517  T
Q  117 caaatgagtcaaccatgtaacttatatagtaactaagctagtatcataactaactatattcttattcttaata 189  Q
    |||||||||||||||||| ||||||||||||||| | ||||| || |||||||||||||  ||||||||||||    
T  55849518 caaatgagtcaaccatgtgacttatatagtaactgaactagtgtcctaactaactatatcattattcttaata 55849590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 158
Target Start/End: Original strand, 55852054 - 55852144
Alignment:
Q  69 tattgtattgatgatagttgaaatgatacaagaat-tgaatgatagatacaaatgagtcaaccatgtaacttatatagtaactaagctagt 158  Q
    ||||||||||||||||||||||||||||||||||| | || ||||  |||||||||||||||||||| | ||||||||||||||| |||||    
T  55852054 tattgtattgatgatagttgaaatgatacaagaatgtaaaagataactacaaatgagtcaaccatgttagttatatagtaactaatctagt 55852144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 4e-34; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 49 - 189
Target Start/End: Original strand, 20225520 - 20225661
Alignment:
Q  49 gagagaaaagcttaaaatattattgtattgatgatagttgaaatgatacaagaattgaat-gatagatacaaatgagtcaaccatgtaacttatatagta 147  Q
    |||||||||||||  || | |||||||||||||||| |||||||||||||||||| |||  ||||| |||||| ||||||||||||| ||||||||||||    
T  20225520 gagagaaaagcttgcaaaactattgtattgatgataattgaaatgatacaagaatggaaaagataggtacaaaagagtcaaccatgtgacttatatagta 20225619  T
Q  148 actaagctagtatcataactaactatattcttattcttaata 189  Q
    ||||| ||||| || |||||||||||||  ||||||||||||    
T  20225620 actaaactagtgtcctaactaactatatcattattcttaata 20225661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 19 - 139
Target Start/End: Original strand, 20226820 - 20226942
Alignment:
Q  19 tgttaggaaacaaggcatctatggatgaag-gagagaaaagcttaaaatattattgtattgatgatagttgaaatgatacaagaat-tgaatgatagata 116  Q
    |||||||||||| |||||  ||||||  || |||||||||| || ||| | |||||||||||||||| ||||||||||||||||||   || ||||| ||    
T  20226820 tgttaggaaacacggcattcatggatatagagagagaaaagtttgaaaaactattgtattgatgataattgaaatgatacaagaatgaaaaagataggta 20226919  T
Q  117 caaatgagtcaaccatgtaactt 139  Q
    |||| ||||||||||||||||||    
T  20226920 caaaagagtcaaccatgtaactt 20226942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 190 - 239
Target Start/End: Complemental strand, 928687 - 928638
Alignment:
Q  190 cgaacaacaagaagaatcagtaacaagaaccaagaataacggtggatatt 239  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  928687 cgaacaacaagaagaatcagtaacaagaaccaagaatcacggtggatatt 928638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Original strand, 20226953 - 20227018
Alignment:
Q  123 agtcaaccatgtaacttatatagtaactaagctagtatcataactaactatattcttattcttaat 188  Q
    |||||||||| | ||||||||||||||||| ||||| || || ||||||||||  |||||||||||    
T  20226953 agtcaaccatatgacttatatagtaactaaactagtgtcctagctaactatatcattattcttaat 20227018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 1e-31; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 49 - 189
Target Start/End: Original strand, 9664661 - 9664802
Alignment:
Q  49 gagagaaaagcttaaaatattattgtattgatgatagttgaaatgatacaagaattgaat-gatagatacaaatgagtcaaccatgtaacttatatagta 147  Q
    ||||||||||||| ||| | |||||||||||| ||||||||||||||||||||||  ||  ||||| |||||||||||||||||||| ||||||||||||    
T  9664661 gagagaaaagcttgaaaaactattgtattgattatagttgaaatgatacaagaatgaaaaagataggtacaaatgagtcaaccatgtgacttatatagta 9664760  T
Q  148 actaagctagtatcataactaactatattcttattcttaata 189  Q
    ||||| ||||| || ||| |||||||||  | ||||||||||    
T  9664761 actaaactagtgtcctaattaactatatcatcattcttaata 9664802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 190
Target Start/End: Complemental strand, 3075082 - 3074908
Alignment:
Q  19 tgttaggaaacaaggcatctatggatgaaggagagaaaagcttaaaatattattgtatt-gatgatagttgaaatgatacaagaattgaat-gatagata 116  Q
    |||||| ||||| |||||| ||||||  || ||||||||||||  || | ||||||||| ||||||||||||||||||| |||||| |||  ||||||||    
T  3075082 tgttagaaaacatggcatccatggatatag-agagaaaagcttggaaaactattgtatttgatgatagttgaaatgatataagaatggaaaagatagata 3074984  T
Q  117 caaatgagtcaaccatgtaacttatata--gtaactaagctagtatcataactaactatattcttattcttaatac 190  Q
    |||||||| ||||||||| | |||||||  |||||||| ||||| || |||||||||||||  |||||||||||||    
T  3074983 caaatgagacaaccatgtgatttatatatagtaactaaactagtgtcctaactaactatatcattattcttaatac 3074908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 787388 - 787267
Alignment:
Q  69 tattgtattgatgatagttgaaatgatacaagaatt-gaatgatagatacaaatgagtcaaccatgtaacttatatagtaactaagctagtatcataact 167  Q
    |||||||||||||||| ||||||||||||||||||  ||| ||| | |||||||||||||| ||| | ||||||||||||||||| ||||| || |||||    
T  787388 tattgtattgatgatacttgaaatgatacaagaatgagaaagatcggtacaaatgagtcaatcatatgacttatatagtaactaaactagtgtcctaact 787289  T
Q  168 aactatattcttattcttaata 189  Q
    | ||||||  ||||||||||||    
T  787288 acctatatcattattcttaata 787267  T

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Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 142
Target Start/End: Original strand, 21146854 - 21146941
Alignment:
Q  54 aaaagcttaaaatattattgtattgatgatagttgaaatgatacaagaattgaatgatagatacaaatgagtcaaccatgtaacttata 142  Q
    |||| |||| || |||||||||||||  ||||||||||||||||||||||  || || || |||||||||||||| ||||| |||||||    
T  21146854 aaaaacttagaaaattattgtattgaaaatagttgaaatgatacaagaatgaaaagagaggtacaaatgagtcaa-catgtgacttata 21146941  T

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Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 49 - 191
Target Start/End: Complemental strand, 20868818 - 20868673
Alignment:
Q  49 gagagaaaagcttaaaatattattgtattgatgatagttgaa-atgatacaagaattgaat-gatagatacaaatgagtcaaccatgtaacttatatagt 146  Q
    |||||||||||||| || | |||||||||||||||||||||| || ||||||||||  ||  ||||| ||||||| |||||||||||| |||||||||||    
T  20868818 gagagaaaagcttagaaaactattgtattgatgatagttgaacataatacaagaatgaaaaagataggtacaaataagtcaaccatgtgacttatatagt 20868719  T
Q  147 aact-aagctagtatcataactaactatattcttattcttaatacg 191  Q
    |||| || |||||||| |||||||||||||  ||||||||||||||    
T  20868718 aactaaaactagtatcctaactaactatatcattattcttaatacg 20868673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 20871436 - 20871312
Alignment:
Q  69 tattgtattgatgatagttgaaa-tgatacaagaattgaat-gatagatacaaatgagtcaaccatgtaacttatatagtaact-aagctagtatcataa 165  Q
    ||||||||||||||||||||||| | ||||||||||  ||  ||||| |||||||||||||||||||| ||||||||||||||| || |||||||| |||    
T  20871436 tattgtattgatgatagttgaaaataatacaagaatgaaaaagataggtacaaatgagtcaaccatgtgacttatatagtaactaaaactagtatcctaa 20871337  T
Q  166 ctaactatattcttattcttaatac 190  Q
    ||||||||||  | |||||||||||    
T  20871336 ctaactatatcatcattcttaatac 20871312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 17 - 152
Target Start/End: Complemental strand, 27462279 - 27462144
Alignment:
Q  17 actgttaggaaacaaggcatctatggatgaaggagagaaaagcttaaaatattattgtattgatgatagttgaaatgatacaagaat-tgaatgatagat 115  Q
    |||||||| ||||| |||||| ||||||  || ||||||||||||  || | |||||||||||| ||||||||||||||||||||||   || ||||| |    
T  27462279 actgttagtaaacatggcatccatggatatag-agagaaaagcttggaaaactattgtattgattatagttgaaatgatacaagaatgaaaaagataggt 27462181  T
Q  116 acaaatgagtcaaccatgtaacttatatagtaactaa 152  Q
    ||||||||||||||||| | |||||||||||||||||    
T  27462180 acaaatgagtcaaccatatgacttatatagtaactaa 27462144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 189
Target Start/End: Complemental strand, 51308926 - 51308791
Alignment:
Q  54 aaaagcttaaaatattattgtattgatgatagttgaaatgatacaagaattgaat-gatagatacaaatgagtcaaccatgtaacttatatagtaactaa 152  Q
    ||||||||| || |||||||||||||| ||||||||||||||||||||||  ||  |||   |||||||||||||||||||| ||||||||||||||||     
T  51308926 aaaagcttataa-attattgtattgataatagttgaaatgatacaagaataaaagagattagtacaaatgagtcaaccatgtgacttatatagtaactac 51308828  T
Q  153 gctagtatcataactaactatattcttattcttaata 189  Q
     ||||  || ||| |||||||||  ||||||||||||    
T  51308827 actagcgtcctaattaactatatcattattcttaata 51308791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 189
Target Start/End: Complemental strand, 35610871 - 35610797
Alignment:
Q  115 tacaaatgagtcaaccatgtaacttatatagtaactaagctagtatcataactaactatattcttattcttaata 189  Q
    |||||||||||||||| ||| ||||||||||||||||| |||||| | |||||||||||||| ||||||||||||    
T  35610871 tacaaatgagtcaaccttgtgacttatatagtaactaaactagtaccctaactaactatattattattcttaata 35610797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 24595346 - 24595226
Alignment:
Q  49 gagagaaaagcttaaaatattattgtattgatgatagttgaaa-tgatacaagaattgaat-gatagatacaaatgagtcaaccatgtaacttatatagt 146  Q
    |||||||||||||| || | ||||||||||||||||||||||| ||||||||||||  ||  |||   |||||||||||||||||||| |||||||||||    
T  24595346 gagagaaaagcttagaa-actattgtattgatgatagttgaaaatgatacaagaatgaaaaagattagtacaaatgagtcaaccatgtgacttatatagt 24595248  T
Q  147 aactaagctagtatcataacta 168  Q
    |||||| ||||| || ||||||    
T  24595247 aactaaactagtgtcctaacta 24595226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 178
Target Start/End: Original strand, 447123 - 447229
Alignment:
Q  71 ttgtattgatgatagttgaaatgatacaagaattgaatgatagatacaaatgagtcaaccatgtaacttatatagtaactaagctagtatcataactaac 170  Q
    ||||||| ||| |||||||||||||| || ||| ||| || || |||||||||||||||  ||| |||| ||||||| |||| |||||| | |||| |||    
T  447123 ttgtatttatggtagttgaaatgatagaaaaat-gaaagagaggtacaaatgagtcaactttgtgacttctatagtatctaaactagtaccctaaccaac 447221  T
Q  171 tatattct 178  Q
    ||||||||    
T  447222 tatattct 447229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 189
Target Start/End: Complemental strand, 51306400 - 51306330
Alignment:
Q  119 aatgagtcaaccatgtaacttatatagtaactaagctagtatcataactaactatattcttattcttaata 189  Q
    |||||||||||||| ||| ||||||||||||||  ||||| || ||| |||||||||  ||||||||||||    
T  51306400 aatgagtcaaccatataagttatatagtaactacactagtgtcctaattaactatatcattattcttaata 51306330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 1e-25; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 189
Target Start/End: Original strand, 27172853 - 27172995
Alignment:
Q  47 aggagagaaaagcttaaaatattattgtattgatgatagttgaaatgatacaagaattgaat-gatagatacaaatgagtcaaccatgtaacttatatag 145  Q
    |||||||||||||||  || | |||| |||||||||||||||||||||||||||||| |||  ||||| ||||||||||||| | |  | ||||||||||    
T  27172853 aggagagaaaagcttggaaaactattctattgatgatagttgaaatgatacaagaatggaaaagatagttacaaatgagtcacctaa-tgacttatatag 27172951  T
Q  146 taactaagctagtatcataactaactatattcttattcttaata 189  Q
    ||||||| |||||||| ||||| |||||||  ||||||||||||    
T  27172952 taactaaactagtatcctaacttactatatcattattcttaata 27172995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 39040636 - 39040708
Alignment:
Q  118 aaatgagtcaaccatgtaacttatatagtaactaagctagtatcataactaactatattcttattcttaatac 190  Q
    ||||||||||||| ||| ||||||||||||||||| ||||||   |||||||||||||  |||||||||||||    
T  39040636 aaatgagtcaaccttgtgacttatatagtaactaaactagtactctaactaactatatcattattcttaatac 39040708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 37498238 - 37498280
Alignment:
Q  54 aaaagcttaaaatattattgtattgatgatagttgaaatgata 96  Q
    |||| |||| || ||||||||||||||||||||||||||||||    
T  37498238 aaaaacttagaagattattgtattgatgatagttgaaatgata 37498280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 49 - 189
Target Start/End: Original strand, 26608037 - 26608177
Alignment:
Q  49 gagagaaaagcttaaaatattattgtattgatgatagttgaaa-tgatacaagaattgaat-gatagatacaaatgagtcaaccatgtaacttatatagt 146  Q
    |||||||||||||| ||   ||||||||||||||||||||||| ||||||||||||  ||  ||||| |||| ||||||||||| ||| |||||||||||    
T  26608037 gagagaaaagcttagaaa--tattgtattgatgatagttgaaaatgatacaagaatgaaaaagataggtacagatgagtcaaccttgtgacttatatagt 26608134  T
Q  147 aactaagctagtatcataactaactatattcttattcttaata 189  Q
    |||| | |||||||| |||||||||||||  ||||||||||||    
T  26608135 aactgaactagtatcctaactaactatatcattattcttaata 26608177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 9e-20; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 49 - 189
Target Start/End: Complemental strand, 12062908 - 12062765
Alignment:
Q  49 gagagaaaagcttaaaatattattgtattgatgatagttgaaa-tgatacaagaattgaatgata--gatacaaatgagtcaaccatgtaacttatatag 145  Q
    |||||||||||||| || | |||| | |||||||| ||||||| | |||||||||| ||| |||   | |||||||||||||||||||| ||||||||||    
T  12062908 gagagaaaagcttagaaaactattctcttgatgatggttgaaaataatacaagaat-gaaagatgtgggtacaaatgagtcaaccatgtgacttatatag 12062810  T
Q  146 taact-aagctagtatcataactaactatattcttattcttaata 189  Q
    ||||| || |||||||| |||||||||||||  ||||||||||||    
T  12062809 taactaaaactagtatcttaactaactatatcattattcttaata 12062765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 49 - 158
Target Start/End: Original strand, 35416118 - 35416228
Alignment:
Q  49 gagagaaaagcttaaaatattattgtattgatgatagttgaaatgatacaagaattga-atgatagatacaaatgagtcaaccatgtaacttatatagta 147  Q
    ||||||||||||| ||| | ||||||||| ||| ||||||||||||||||| |||  | | ||||  |||||||||||||||||||| |||||||||||     
T  35416118 gagagaaaagcttgaaaaactattgtattaatggtagttgaaatgatacaataatgaagaagataagtacaaatgagtcaaccatgtgacttatatagtc 35416217  T
Q  148 actaagctagt 158  Q
    ||||| |||||    
T  35416218 actaaactagt 35416228  T

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Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 369384 - 369263
Alignment:
Q  69 tattgtattgatgatagttgaaatgatacaagaattgaat-gatagatacaaatgagtcaaccatgtaacttatatagtaactaagctagtatcataact 167  Q
    ||||||||||||||||||||||| ||||||| |||  ||  ||| | ||||||| || ||||||| | |||||| |||||||||| ||| |||  |||||    
T  369384 tattgtattgatgatagttgaaaagatacaaaaataaaagagatcggtacaaattagccaaccatatgacttatttagtaactaaactactattctaact 369285  T
Q  168 aactatattcttattcttaata 189  Q
    ||||||||| ||||||||||||    
T  369284 aactatattattattcttaata 369263  T

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Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 4676201 - 4676130
Alignment:
Q  118 aaatgagtcaaccatgtaacttatatagtaactaagctagtatcataactaactatattcttattcttaata 189  Q
    ||||||||||||| ||| ||||||||||||||||| ||||||   |||||||||||||  ||||||||||||    
T  4676201 aaatgagtcaaccctgtgacttatatagtaactaaactagtactctaactaactatatcattattcttaata 4676130  T

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Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 4678146 - 4678075
Alignment:
Q  118 aaatgagtcaaccatgtaacttatatagtaactaagctagtatcataactaactatattcttattcttaata 189  Q
    ||||||||||||| ||| ||||||||||||||||| ||||||   |||||||||||||  ||||||||||||    
T  4678146 aaatgagtcaaccttgtgacttatatagtaactaaactagtactctaactaactatatcattattcttaata 4678075  T

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Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 49 - 159
Target Start/End: Original strand, 31909128 - 31909237
Alignment:
Q  49 gagagaaaagcttaaaatattattgtattgatgatagttgaaatgatacaagaattgaatgataga--tacaaatgagtcaaccatgtaacttatatagt 146  Q
    |||||||||||||| ||   ||||||||||||||||||||||| ||||||  || |||| || |||  |||||||||||||| | ||| |||||||||||    
T  31909128 gagagaaaagcttacaaagctattgtattgatgatagttgaaaagataca--aaatgaaagagagaggtacaaatgagtcaa-cttgtgacttatatagt 31909224  T
Q  147 aactaagctagta 159  Q
     ||||| ||||||    
T  31909225 gactaaactagta 31909237  T

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Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 3785838 - 3785874
Alignment:
Q  67 attattgtattgatgatagttgaaatgatacaagaat 103  Q
    |||||||||||||| ||||||||||||||||||||||    
T  3785838 attattgtattgataatagttgaaatgatacaagaat 3785874  T

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Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 103
Target Start/End: Original strand, 3788548 - 3788584
Alignment:
Q  67 attattgtattgatgatagttgaaatgatacaagaat 103  Q
    |||||||||||||| ||||||||||||||||||||||    
T  3788548 attattgtattgataatagttgaaatgatacaagaat 3788584  T

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Target: chr7 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 2577111 - 2576998
Alignment:
Q  56 aagcttaaaatattattgtattgatgatagttgaaatgatacaagaattgaatgatagatacaaatgagtcaaccatgtaacttatatagtaactaagct 155  Q
    ||||||| || |||||||||||||| ||||||||||||||||||||| ||||  |  |||||||||||||||| | ||| ||||||||||| ||||  ||    
T  2577111 aagcttagaaaattattgtattgataatagttgaaatgatacaagaa-tgaaaaagtgatacaaatgagtcaa-cttgtgacttatatagtgactatact 2577014  T
Q  156 agtatcataactaact 171  Q
    |||| | |||||||||    
T  2577013 agtaccctaactaact 2576998  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 1715751 - 1715828
Alignment:
Q  68 ttattgtattgatgatagttgaaatgatacaagaattgaatgatagatacaaatgagtcaaccatgtaacttatatagt 146  Q
    ||||||||||||| ||||||||||||||| || | |  || || ||||||||| |||||||| | ||||||||||||||    
T  1715751 ttattgtattgataatagttgaaatgatataaaagtgaaaagagagatacaaaagagtcaacta-gtaacttatatagt 1715828  T

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