View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3462_high_6 (Length: 308)
Name: NF3462_high_6
Description: NF3462
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3462_high_6 |
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Alignment Details
Target: chr1 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 19 - 285
Target Start/End: Original strand, 44841480 - 44841746
Alignment:
| Q |
19 |
agaggtgataacatacaccttcataagtggatacacaccaaaataatcctgataaaatagtaatgttaggacacattattggccataaggtaacatcatc |
118 |
Q |
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| T |
44841480 |
agaggtgataacacacaccttcataagtggatacacaccaaaataatcctgataaaatagtaatgttaggacacattattggccataaggtaacatcatc |
44841579 |
T |
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| Q |
119 |
agtatatggaaggccttgttccacattcatcagcatcaacctccctcggttccacctcacgatctaagtagcaaaactacaagaagaacacagatataca |
218 |
Q |
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| T |
44841580 |
agtatatggaaggccttgttccacattcatcggcatcaacctccctcagttccacctcacgatctaagtagcaaaactacaagaagaacacagatataca |
44841679 |
T |
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| Q |
219 |
tgaggtaagaaacattgacaatcatcgcaaataggaaaagaagagcaaagtacaacataatgacatt |
285 |
Q |
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| T |
44841680 |
tgaggtaagaaacattgacaatcatcgcaaataggaaaagaagagcaaagtacaacataatgacatt |
44841746 |
T |
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