View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3465_low_1 (Length: 428)

Name: NF3465_low_1
Description: NF3465
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3465_low_1
NF3465_low_1
[»] chr1 (36 HSPs)
chr1 (6-411)||(171933-172338)
chr1 (24-88)||(40304145-40304209)
chr1 (24-66)||(3052774-3052816)
chr1 (31-86)||(13037781-13037836)
chr1 (26-65)||(50319230-50319269)
chr1 (26-64)||(23895275-23895313)
chr1 (27-69)||(34619472-34619514)
chr1 (26-67)||(4549802-4549843)
chr1 (26-67)||(15579419-15579460)
chr1 (26-65)||(172670-172709)
chr1 (26-65)||(4700159-4700198)
chr1 (26-69)||(7028226-7028269)
chr1 (26-68)||(2462902-2462944)
chr1 (26-64)||(36151598-36151636)
chr1 (25-67)||(37591368-37591410)
chr1 (26-64)||(43420020-43420058)
chr1 (24-66)||(50998489-50998531)
chr1 (26-67)||(1730828-1730869)
chr1 (26-67)||(4768917-4768958)
chr1 (24-61)||(28077138-28077175)
chr1 (31-80)||(29046011-29046060)
chr1 (26-67)||(33759506-33759547)
chr1 (26-67)||(38651502-38651543)
chr1 (26-67)||(42397699-42397740)
chr1 (26-67)||(43029494-43029535)
chr1 (26-63)||(43420198-43420235)
chr1 (26-67)||(45999381-45999422)
chr1 (26-67)||(46499947-46499988)
chr1 (26-66)||(2194451-2194491)
chr1 (26-66)||(3887725-3887765)
chr1 (26-66)||(6976885-6976925)
chr1 (26-86)||(23373383-23373443)
chr1 (28-64)||(31294616-31294652)
chr1 (26-78)||(36641800-36641852)
chr1 (28-80)||(43372054-43372106)
chr1 (26-66)||(43722408-43722448)
[»] chr7 (29 HSPs)
chr7 (24-64)||(35007543-35007583)
chr7 (27-67)||(33894559-33894599)
chr7 (31-81)||(2223070-2223120)
chr7 (21-67)||(46091532-46091578)
chr7 (26-67)||(5373161-5373202)
chr7 (26-67)||(24973880-24973921)
chr7 (26-67)||(31341130-31341171)
chr7 (25-65)||(1432059-1432099)
chr7 (26-62)||(28178910-28178946)
chr7 (26-66)||(35536044-35536084)
chr7 (28-64)||(35808999-35809035)
chr7 (24-64)||(47528024-47528064)
chr7 (24-79)||(2013123-2013178)
chr7 (26-65)||(42656453-42656492)
chr7 (26-61)||(43152995-43153030)
chr7 (29-67)||(3610836-3610874)
chr7 (30-64)||(28702699-28702733)
chr7 (29-67)||(43328185-43328223)
chr7 (26-64)||(49060479-49060517)
chr7 (27-64)||(4591481-4591518)
chr7 (26-63)||(5006602-5006639)
chr7 (26-67)||(5276160-5276201)
chr7 (26-59)||(5715131-5715164)
chr7 (30-67)||(7244638-7244675)
chr7 (30-67)||(22388001-22388038)
chr7 (26-67)||(45593812-45593853)
chr7 (26-67)||(45813273-45813314)
chr7 (26-67)||(46213739-46213780)
chr7 (26-62)||(2894758-2894794)
[»] chr6 (34 HSPs)
chr6 (30-114)||(31461568-31461651)
chr6 (24-67)||(10452451-10452494)
chr6 (26-85)||(29274322-29274381)
chr6 (26-67)||(2514638-2514679)
chr6 (30-67)||(4247731-4247768)
chr6 (30-67)||(7148603-7148640)
chr6 (28-65)||(12631550-12631587)
chr6 (23-67)||(1810390-1810434)
chr6 (27-67)||(33068655-33068695)
chr6 (24-64)||(33500572-33500612)
chr6 (26-81)||(4420539-4420594)
chr6 (27-66)||(31624195-31624234)
chr6 (24-67)||(32917162-32917205)
chr6 (28-67)||(33416321-33416360)
chr6 (26-72)||(507151-507197)
chr6 (26-64)||(2455204-2455242)
chr6 (24-62)||(7354145-7354183)
chr6 (24-66)||(24745366-24745408)
chr6 (26-64)||(24836292-24836330)
chr6 (29-67)||(31668781-31668819)
chr6 (24-66)||(31672007-31672049)
chr6 (21-62)||(781326-781367)
chr6 (43-80)||(3737992-3738029)
chr6 (26-67)||(4248894-4248935)
chr6 (41-78)||(8378027-8378064)
chr6 (26-63)||(20370839-20370876)
chr6 (26-67)||(21959664-21959705)
chr6 (26-67)||(29940732-29940773)
chr6 (39-67)||(4003706-4003734)
chr6 (26-66)||(9093649-9093689)
chr6 (26-66)||(9559634-9559674)
chr6 (29-65)||(24476540-24476576)
chr6 (24-60)||(30537037-30537073)
chr6 (31-67)||(33259752-33259788)
[»] chr5 (29 HSPs)
chr5 (24-67)||(13224365-13224408)
chr5 (26-67)||(7096220-7096261)
chr5 (26-86)||(20982228-20982288)
chr5 (21-64)||(12407749-12407792)
chr5 (25-80)||(26516221-26516276)
chr5 (27-64)||(12460094-12460131)
chr5 (31-72)||(16889666-16889707)
chr5 (26-67)||(37063167-37063208)
chr5 (26-67)||(39128575-39128616)
chr5 (29-65)||(1773521-1773557)
chr5 (26-66)||(11054123-11054163)
chr5 (27-67)||(29588816-29588856)
chr5 (26-65)||(34690812-34690851)
chr5 (27-73)||(34117627-34117673)
chr5 (26-64)||(35135755-35135793)
chr5 (25-67)||(39919738-39919780)
chr5 (20-66)||(42573866-42573912)
chr5 (26-63)||(4014517-4014554)
chr5 (26-59)||(5563648-5563681)
chr5 (27-80)||(10391276-10391329)
chr5 (26-67)||(12595544-12595585)
chr5 (26-67)||(28578828-28578869)
chr5 (26-67)||(29115306-29115347)
chr5 (26-67)||(33459028-33459069)
chr5 (29-66)||(37968828-37968865)
chr5 (26-67)||(40048373-40048414)
chr5 (26-66)||(6593237-6593277)
chr5 (27-79)||(19113211-19113263)
chr5 (30-66)||(38819672-38819708)
[»] chr3 (36 HSPs)
chr3 (26-80)||(41159032-41159086)
chr3 (30-65)||(44014218-44014253)
chr3 (26-64)||(2128344-2128382)
chr3 (26-80)||(41028944-41028998)
chr3 (26-63)||(1395611-1395648)
chr3 (26-67)||(20192699-20192740)
chr3 (26-79)||(40122845-40122898)
chr3 (26-66)||(905063-905103)
chr3 (24-67)||(16790447-16790490)
chr3 (24-67)||(50760550-50760593)
chr3 (24-67)||(52413212-52413255)
chr3 (24-66)||(31053181-31053223)
chr3 (26-64)||(36445671-36445709)
chr3 (28-62)||(42809242-42809276)
chr3 (24-58)||(44295477-44295511)
chr3 (26-80)||(44374737-44374791)
chr3 (21-66)||(237334-237379)
chr3 (26-67)||(16790181-16790222)
chr3 (26-66)||(30574007-30574045)
chr3 (27-64)||(30669064-30669101)
chr3 (29-86)||(36887439-36887496)
chr3 (26-67)||(42039095-42039136)
chr3 (26-59)||(49587009-49587042)
chr3 (26-79)||(51278250-51278303)
chr3 (28-64)||(2304336-2304372)
chr3 (26-66)||(8007788-8007828)
chr3 (26-58)||(15304440-15304472)
chr3 (27-67)||(20173982-20174022)
chr3 (26-86)||(22232743-22232803)
chr3 (26-86)||(25964359-25964419)
chr3 (27-67)||(27792808-27792848)
chr3 (26-66)||(35394794-35394834)
chr3 (27-63)||(42084345-42084381)
chr3 (24-64)||(43116519-43116559)
chr3 (25-65)||(48528516-48528556)
chr3 (26-66)||(49465756-49465796)
[»] chr2 (31 HSPs)
chr2 (26-68)||(5133707-5133749)
chr2 (26-67)||(25609732-25609773)
chr2 (26-67)||(32098401-32098442)
chr2 (26-67)||(34054994-34055035)
chr2 (30-67)||(41033047-41033084)
chr2 (26-66)||(17952794-17952834)
chr2 (26-65)||(31740052-31740092)
chr2 (24-64)||(32694151-32694191)
chr2 (29-80)||(10143095-10143146)
chr2 (24-67)||(26522715-26522758)
chr2 (29-64)||(38239647-38239682)
chr2 (24-67)||(41039737-41039780)
chr2 (26-64)||(5045250-5045288)
chr2 (26-64)||(13864589-13864627)
chr2 (26-64)||(31461377-31461415)
chr2 (27-65)||(32364818-32364856)
chr2 (26-80)||(33197332-33197386)
chr2 (26-80)||(34339046-34339100)
chr2 (27-69)||(41809337-41809379)
chr2 (28-65)||(8820368-8820405)
chr2 (26-67)||(9878775-9878816)
chr2 (26-67)||(11393748-11393789)
chr2 (26-67)||(11410409-11410450)
chr2 (26-67)||(12215743-12215784)
chr2 (26-67)||(14277987-14278028)
chr2 (26-67)||(18962131-18962172)
chr2 (26-67)||(30990462-30990503)
chr2 (25-66)||(32821746-32821787)
chr2 (27-67)||(32848846-32848886)
chr2 (26-62)||(40837521-40837557)
chr2 (29-65)||(44786501-44786537)
[»] scaffold0590 (1 HSPs)
scaffold0590 (26-67)||(1167-1208)
[»] scaffold0275 (1 HSPs)
scaffold0275 (26-67)||(2767-2808)
[»] chr4 (29 HSPs)
chr4 (26-67)||(21593104-21593145)
chr4 (26-65)||(6364087-6364126)
chr4 (29-67)||(47970254-47970292)
chr4 (26-64)||(51044552-51044590)
chr4 (30-67)||(4191675-4191712)
chr4 (26-67)||(4798652-4798693)
chr4 (26-67)||(25487638-25487679)
chr4 (25-81)||(17125722-17125778)
chr4 (20-67)||(2980558-2980605)
chr4 (21-80)||(32066497-32066556)
chr4 (24-67)||(50745936-50745979)
chr4 (29-64)||(52645845-52645880)
chr4 (25-67)||(486017-486059)
chr4 (26-80)||(19422341-19422395)
chr4 (29-67)||(24160926-24160964)
chr4 (26-63)||(3155543-3155580)
chr4 (26-67)||(8422930-8422971)
chr4 (26-67)||(9680600-9680641)
chr4 (26-67)||(17884004-17884045)
chr4 (26-67)||(30338685-30338726)
chr4 (26-59)||(39178343-39178376)
chr4 (27-64)||(42641727-42641764)
chr4 (24-65)||(45128401-45128442)
chr4 (26-67)||(51555960-51556001)
chr4 (24-64)||(3176213-3176253)
chr4 (42-86)||(9843775-9843819)
chr4 (27-67)||(28623225-28623265)
chr4 (21-65)||(30024638-30024682)
chr4 (26-86)||(30743283-30743342)
[»] chr8 (22 HSPs)
chr8 (26-66)||(26215433-26215473)
chr8 (21-65)||(42597339-42597383)
chr8 (30-65)||(16163375-16163410)
chr8 (26-80)||(14482125-14482179)
chr8 (21-86)||(29592261-29592326)
chr8 (27-67)||(1112789-1112829)
chr8 (27-67)||(10114426-10114466)
chr8 (21-61)||(30627990-30628030)
chr8 (28-64)||(44617882-44617918)
chr8 (26-64)||(4558737-4558775)
chr8 (25-67)||(11188247-11188289)
chr8 (26-67)||(8194031-8194072)
chr8 (28-65)||(14949826-14949863)
chr8 (26-67)||(29699190-29699231)
chr8 (26-67)||(35298571-35298612)
chr8 (26-63)||(39392754-39392791)
chr8 (26-62)||(1470949-1470985)
chr8 (31-67)||(1561215-1561251)
chr8 (26-66)||(9956905-9956945)
chr8 (26-66)||(11119092-11119132)
chr8 (26-62)||(32976358-32976394)
chr8 (26-66)||(37444508-37444548)
[»] scaffold0053 (1 HSPs)
scaffold0053 (26-67)||(20115-20156)
[»] scaffold0024 (1 HSPs)
scaffold0024 (26-67)||(27512-27553)


Alignment Details
Target: chr1 (Bit Score: 394; Significance: 0; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 6 - 411
Target Start/End: Complemental strand, 172338 - 171933
Alignment:
Q  6 agaacctgtgcaggctttattttattttatctttagttatagaaatagcttatacataagcaataatacgataagaacttacaaatataatctcttaatt 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  172338 agaacctgtgcaggctttattttattttatctttagttatagaaatagcttatacataagcaataatacgataagaacttacaaatataatctcttaatt 172239  T
Q  106 aagttgtttttccaatacattatgaaaatagcttaaaacatatatgaacataacctaacctaagtacctaaccacattttctcttaaattaacaaaataa 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  172238 aagttgtttttccaatacattatgaaaatagcttaaaacatatatgaacataacctaacctaagtacctaaccacatattctcttaaattaacaaaataa 172139  T
Q  206 cttatgtaccattcaataagcgcttaatcaagctattcatccaaacgcaacaaagataacaaaatttttgcacattagaatgaaaataagttaaaagcaa 305  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  172138 cttatgtaccattcaataagcgcttaatcaagctattcatccaaacgcaacaaagataacaaaatttttgcacattagaatgaaagtaagttaaaagcaa 172039  T
Q  306 aaagctaaccaagaaaaatactggtatctctagcttctctaagcggtctaccatcagaacgaatggattcagcaagatgacgttcgaagtatcgaagcgg 405  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  172038 aaaactaaccaagaaaaatactggtatctctagcttctctaagcggtctaccatcagaacgaatggattcagcaagatgacgttcgaagtatcgaagcgg 171939  T
Q  406 aaaaag 411  Q
    ||||||    
T  171938 aaaaag 171933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 88
Target Start/End: Original strand, 40304145 - 40304209
Alignment:
Q  24 attttattttatctttagttatagaaatagcttatacataagcaataatacgataagaacttaca 88  Q
    |||||||||||||||| |||||| ||||||||||||| |||||||||||| |||||  |||||||    
T  40304145 attttattttatcttttgttatataaatagcttatacctaagcaataatatgataaacacttaca 40304209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 3052774 - 3052816
Alignment:
Q  24 attttattttatctttagttatagaaatagcttatacataagc 66  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  3052774 attttattttatctttagttatagaaatagcttacacataagc 3052816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 86
Target Start/End: Complemental strand, 13037836 - 13037781
Alignment:
Q  31 tttatctttagttatagaaatagcttatacataagcaataatacgataagaactta 86  Q
    ||||||||| ||||||||||||||||||||||||||| | ||| || |||||||||    
T  13037836 tttatcttttgttatagaaatagcttatacataagcacttatatgacaagaactta 13037781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 50319269 - 50319230
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataag 65  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  50319269 tttattttatcttttgttatagaaatagcttatacataag 50319230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 23895313 - 23895275
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataa 64  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  23895313 tttattttatcttttgttatagaaatagcttatacataa 23895275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 34619472 - 34619514
Alignment:
Q  27 ttattttatctttagttatagaaatagcttatacataagcaat 69  Q
    ||||||||||||| ||||||||||| |||||||||||||||||    
T  34619472 ttattttatcttttgttatagaaatggcttatacataagcaat 34619514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 4549843 - 4549802
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| |||||||||||||||| ||||||||||    
T  4549843 tttattttatcttttgttatagaaatagcttgtacataagca 4549802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 15579460 - 15579419
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||| | ||||||||||||||||||||||||||||||||    
T  15579460 tttatttgaactttagttatagaaatagcttatacataagca 15579419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 65
Target Start/End: Original strand, 172670 - 172709
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataag 65  Q
    ||||| |||||||| |||||||||||||||||||||||||    
T  172670 tttatgttatcttttgttatagaaatagcttatacataag 172709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 65
Target Start/End: Original strand, 4700159 - 4700198
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataag 65  Q
    |||||||||||||| |||||||||||||||| ||||||||    
T  4700159 tttattttatcttttgttatagaaatagcttgtacataag 4700198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 69
Target Start/End: Complemental strand, 7028269 - 7028226
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagcaat 69  Q
    |||||||||||||| | ||||||||||| |||||||||||||||    
T  7028269 tttattttatcttttgctatagaaatagtttatacataagcaat 7028226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 2462944 - 2462902
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagcaa 68  Q
    ||||| |||| ||| ||||||||||||||||||||||||||||    
T  2462944 tttatcttatattttgttatagaaatagcttatacataagcaa 2462902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 36151598 - 36151636
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataa 64  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  36151598 tttattttatcttttgttattgaaatagcttatacataa 36151636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 37591410 - 37591368
Alignment:
Q  25 ttttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||||  |||||||||||| |||||||||||||    
T  37591410 ttttattttatcttttattatagaaatagtttatacataagca 37591368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 43420058 - 43420020
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataa 64  Q
    |||||||||||||| ||||| ||||||||||||||||||    
T  43420058 tttattttatctttcgttatggaaatagcttatacataa 43420020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 50998531 - 50998489
Alignment:
Q  24 attttattttatctttagttatagaaatagcttatacataagc 66  Q
    ||||| |||||||||| |||| |||||||||||||||||||||    
T  50998531 attttgttttatcttttgttacagaaatagcttatacataagc 50998489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 1730869 - 1730828
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| |||| | ||||||||||||||||||||    
T  1730869 tttattttatctttggttaaaaaaatagcttatacataagca 1730828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 4768917 - 4768958
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| | ||||| |||||||||||||||||||    
T  4768917 tttattttatcttttggtatagcaatagcttatacataagca 4768958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 28077138 - 28077175
Alignment:
Q  24 attttattttatctttagttatagaaatagcttataca 61  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  28077138 attttcttttatctttggttatagaaatagcttataca 28077175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 80
Target Start/End: Original strand, 29046011 - 29046060
Alignment:
Q  31 tttatctttagttatagaaatagcttatacataagcaataatacgataag 80  Q
    ||||||||| |||||||||||| |||||||| ||||| | ||||||||||    
T  29046011 tttatcttttgttatagaaatatcttatacacaagcacttatacgataag 29046060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 33759547 - 33759506
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||| |||||||| |||||||||||||||||| |||||||    
T  33759547 tttattatatctttaattatagaaatagcttatatataagca 33759506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 38651502 - 38651543
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||| ||||||||| ||||||||| |||||||||||||||||    
T  38651502 tttagtttatcttttgttatagaattagcttatacataagca 38651543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 42397740 - 42397699
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||| ||| |||| ||||||||||||||||||||||    
T  42397740 tttattttatgttttgttacagaaatagcttatacataagca 42397699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 43029494 - 43029535
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| ||| ||||||||| |||||||||||||    
T  43029494 tttattttatcttttgttgtagaaataggttatacataagca 43029535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 43420235 - 43420198
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacata 63  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  43420235 tttattttatctttcgttatggaaatagcttatacata 43420198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 45999381 - 45999422
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    ||||| |||||||| |||||||||||||||||||||| ||||    
T  45999381 tttatcttatcttttgttatagaaatagcttatacatgagca 45999422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 46499947 - 46499988
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||||||||||  |||||||||||||||||| |||||||    
T  46499947 tttattttatcttttcttatagaaatagcttatagataagca 46499988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 2194451 - 2194491
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagc 66  Q
    |||||||||||| | |||||||||||||||||| |||||||    
T  2194451 tttattttatctattgttatagaaatagcttatgcataagc 2194491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 3887725 - 3887765
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagc 66  Q
    |||||||||||||| | ||| ||||||||||||||||||||    
T  3887725 tttattttatcttttgctattgaaatagcttatacataagc 3887765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 6976925 - 6976885
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagc 66  Q
    ||||| |||||||| |||||||||||| |||||||||||||    
T  6976925 tttatcttatcttttgttatagaaatatcttatacataagc 6976885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 23373383 - 23373443
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagcaataatacgataagaactta 86  Q
    |||||||||||||| | ||||||||||||| |||| |||||| | ||| |||||| |||||    
T  23373383 tttattttatcttttgatatagaaatagctaatacgtaagcagttatatgataagcactta 23373443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 31294616 - 31294652
Alignment:
Q  28 tattttatctttagttatagaaatagcttatacataa 64  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  31294616 tattttatcttttgttatagaaatagctaatacataa 31294652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 78
Target Start/End: Complemental strand, 36641852 - 36641800
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagcaataatacgata 78  Q
    |||||||||||||| |||||||||||| |||||| ||||| ||| ||| ||||    
T  36641852 tttattttatcttttgttatagaaataacttatatataagtaattatatgata 36641800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 43372054 - 43372106
Alignment:
Q  28 tattttatctttagttatagaaatagcttatacataagcaataatacgataag 80  Q
    |||||||||| | |||||||||||||| ||||||||||| || ||| ||||||    
T  43372054 tattttatctattgttatagaaatagcctatacataagccattatatgataag 43372106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 43722408 - 43722448
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagc 66  Q
    |||||||||||||  |||||| |||||||||||||||||||    
T  43722408 tttattttatcttctgttatataaatagcttatacataagc 43722448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 35007583 - 35007543
Alignment:
Q  24 attttattttatctttagttatagaaatagcttatacataa 64  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  35007583 attttattttatctttagttatagaaatagcttatacataa 35007543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 33894599 - 33894559
Alignment:
Q  27 ttattttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  33894599 ttattttatcttttgttatagaaatagcttatacataagca 33894559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 2223120 - 2223070
Alignment:
Q  31 tttatctttagttatagaaatagcttatacataagcaataatacgataaga 81  Q
    ||||||||| |||||||||||||||||||||||| || | |||||||||||    
T  2223120 tttatcttttgttatagaaatagcttatacataaacacttatacgataaga 2223070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 67
Target Start/End: Complemental strand, 46091578 - 46091532
Alignment:
Q  21 tttattttattttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||||||||||||||| ||||||| |||||||||| ||||||||    
T  46091578 tttattttattttatctttcgttataggaatagcttatgcataagca 46091532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 5373202 - 5373161
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| |||||||||||||| ||||||||||||    
T  5373202 tttattttatcttttgttatagaaatagcatatacataagca 5373161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 24973921 - 24973880
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| |||||||||||||||| ||||||||||    
T  24973921 tttattttatcttttgttatagaaatagcttttacataagca 24973880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 31341171 - 31341130
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  31341171 tttattttatcttttgttatacaaatagcttatacataagca 31341130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 1432059 - 1432099
Alignment:
Q  25 ttttattttatctttagttatagaaatagcttatacataag 65  Q
    ||||||||||||||| |||||||||||| ||||||||||||    
T  1432059 ttttattttatcttttgttatagaaataacttatacataag 1432099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 28178946 - 28178910
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacat 62  Q
    |||||||||||||| ||||||||||||||||||||||    
T  28178946 tttattttatcttttgttatagaaatagcttatacat 28178910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 35536084 - 35536044
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagc 66  Q
    |||||||||||||  ||||||||||||||||||||||||||    
T  35536084 tttattttatcttatgttatagaaatagcttatacataagc 35536044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 35808999 - 35809035
Alignment:
Q  28 tattttatctttagttatagaaatagcttatacataa 64  Q
    |||||||||||| ||||||||||||||||||||||||    
T  35808999 tattttatcttttgttatagaaatagcttatacataa 35809035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 47528024 - 47528064
Alignment:
Q  24 attttattttatctttagttatagaaatagcttatacataa 64  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  47528024 attttattttatccttaattatagaaatagcttatacataa 47528064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 2013178 - 2013123
Alignment:
Q  24 attttattttatctttagttatagaaatagcttatacataagcaataatacgataa 79  Q
    |||| ||||||||||| ||||||||||||  ||||||||||||| | |||||||||    
T  2013178 atttgattttatcttttgttatagaaataaattatacataagcatttatacgataa 2013123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 42656492 - 42656453
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataag 65  Q
    |||||||||||||| ||||||||||||||||||| |||||    
T  42656492 tttattttatcttttgttatagaaatagcttatatataag 42656453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 61
Target Start/End: Original strand, 43152995 - 43153030
Alignment:
Q  26 tttattttatctttagttatagaaatagcttataca 61  Q
    |||||||||||||| |||||||||||||||||||||    
T  43152995 tttattttatcttttgttatagaaatagcttataca 43153030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 3610836 - 3610874
Alignment:
Q  29 attttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  3610836 attttatcttttgttgtagaaatagcttatacataagca 3610874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 64
Target Start/End: Complemental strand, 28702733 - 28702699
Alignment:
Q  30 ttttatctttagttatagaaatagcttatacataa 64  Q
    |||||||||| ||||||||||||||||||||||||    
T  28702733 ttttatcttttgttatagaaatagcttatacataa 28702699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 67
Target Start/End: Complemental strand, 43328223 - 43328185
Alignment:
Q  29 attttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||||||| ||||||||||||||| |||||||||||    
T  43328223 attttatctttggttatagaaatagctaatacataagca 43328185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 49060517 - 49060479
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataa 64  Q
    |||||||||| ||| ||||||||||||||||||||||||    
T  49060517 tttattttattttttgttatagaaatagcttatacataa 49060479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 64
Target Start/End: Complemental strand, 4591518 - 4591481
Alignment:
Q  27 ttattttatctttagttatagaaatagcttatacataa 64  Q
    ||||||||||||| |||||||| |||||||||||||||    
T  4591518 ttattttatcttttgttatagagatagcttatacataa 4591481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 5006602 - 5006639
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacata 63  Q
    |||||||||||||| ||||||| |||||||||||||||    
T  5006602 tttattttatcttttgttataggaatagcttatacata 5006639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 5276201 - 5276160
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    ||||| |||||||| |||||| ||||||||||||||||||||    
T  5276201 tttatgttatcttttgttataaaaatagcttatacataagca 5276160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 59
Target Start/End: Original strand, 5715131 - 5715164
Alignment:
Q  26 tttattttatctttagttatagaaatagcttata 59  Q
    |||||||||||||| |||||||||||||||||||    
T  5715131 tttattttatctttcgttatagaaatagcttata 5715164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 7244675 - 7244638
Alignment:
Q  30 ttttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||| | |||||||||||||||||||||||||    
T  7244675 ttttatcttttgatatagaaatagcttatacataagca 7244638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 22388001 - 22388038
Alignment:
Q  30 ttttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||| |||||||||||||||||| ||||||||    
T  22388001 ttttatcttttgttatagaaatagcttatccataagca 22388038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 45593812 - 45593853
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||| ||| |||| ||||||||||||||||||||||    
T  45593812 tttattttatgttttgttacagaaatagcttatacataagca 45593853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 45813273 - 45813314
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| | ||||||||||||||||| |||||||    
T  45813273 tttattttatcttttggtatagaaatagcttataaataagca 45813314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 46213780 - 46213739
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||| ||| |||||||||||||||| ||||||||||    
T  46213780 tttattttatattttgttatagaaatagcttttacataagca 46213739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 2894794 - 2894758
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacat 62  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  2894794 tttaatttatcttttgttatagaaatagcttatacat 2894758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 30 - 114
Target Start/End: Complemental strand, 31461651 - 31461568
Alignment:
Q  30 ttttatctttagttatagaaatagcttatacataagcaataatacgataagaacttacaaatataatctcttaattaagttgttt 114  Q
    |||||||||| ||||||||||||||||||||||||||| | |||| |||||  ||||  ||||||| | ||||||||||||||||    
T  31461651 ttttatcttttgttatagaaatagcttatacataagcacttatacaataagtgctta-taatataagcacttaattaagttgttt 31461568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 10452451 - 10452494
Alignment:
Q  24 attttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||| ||| |||||||||||||||||||||||||||    
T  10452451 attttattttatattttgttatagaaatagcttatacataagca 10452494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 29274322 - 29274381
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagcaataatacgataagaactt 85  Q
    |||||||||||||| | ||||||||||||||||||||||||| |  || |||||||||||    
T  29274322 tttattttatcttttgctatagaaatagcttatacataagcatttctatgataagaactt 29274381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 2514679 - 2514638
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||||||||||  ||||||||||||||||||||||||||    
T  2514679 tttattttatcttttattatagaaatagcttatacataagca 2514638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 4247731 - 4247768
Alignment:
Q  30 ttttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||| |||||||||||||||||||||||||||    
T  4247731 ttttatcttttgttatagaaatagcttatacataagca 4247768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 7148640 - 7148603
Alignment:
Q  30 ttttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| |||||||||||||||||||||||    
T  7148640 ttttatctttagttgtagaaatagcttatacataagca 7148603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 12631587 - 12631550
Alignment:
Q  28 tattttatctttagttatagaaatagcttatacataag 65  Q
    |||||||||||| |||||||||||||||||||||||||    
T  12631587 tattttatctttggttatagaaatagcttatacataag 12631550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 1810390 - 1810434
Alignment:
Q  23 tattttattttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||||||||||||| |||||||||||||||| | ||||||||    
T  1810390 tattttattttatcttttgttatagaaatagcttttgcataagca 1810434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 33068655 - 33068695
Alignment:
Q  27 ttattttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  33068655 ttattttatcttttgttatagaaataacttatacataagca 33068695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 33500572 - 33500612
Alignment:
Q  24 attttattttatctttagttatagaaatagcttatacataa 64  Q
    |||||| ||||||||| ||||||||||||||||||||||||    
T  33500572 attttactttatcttttgttatagaaatagcttatacataa 33500612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 4420594 - 4420539
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagcaataatacgataaga 81  Q
    |||||||||||||| ||||||||| ||||||||||||||  | | |||||||||||    
T  4420594 tttattttatcttttgttatagaagtagcttatacataaatatttatacgataaga 4420539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 66
Target Start/End: Complemental strand, 31624234 - 31624195
Alignment:
Q  27 ttattttatctttagttatagaaatagcttatacataagc 66  Q
    ||||||||||||| ||||||||||||||||||||| ||||    
T  31624234 ttattttatcttttgttatagaaatagcttatacacaagc 31624195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 32917205 - 32917162
Alignment:
Q  24 attttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||||| | ||| |||||||||||||||||||||    
T  32917205 attttattttatcttttgctattgaaatagcttatacataagca 32917162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 67
Target Start/End: Complemental strand, 33416360 - 33416321
Alignment:
Q  28 tattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||| |||||| ||||||||||||||||||||    
T  33416360 tattttatcttttgttataaaaatagcttatacataagca 33416321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 72
Target Start/End: Complemental strand, 507197 - 507151
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagcaataat 72  Q
    |||||||||||||| ||||||||||||  ||||||||||||| ||||    
T  507197 tttattttatcttttgttatagaaataatttatacataagcactaat 507151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 2455242 - 2455204
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataa 64  Q
    |||||||||||| ||| ||||||||||||||||||||||    
T  2455242 tttattttatctatagctatagaaatagcttatacataa 2455204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 62
Target Start/End: Complemental strand, 7354183 - 7354145
Alignment:
Q  24 attttattttatctttagttatagaaatagcttatacat 62  Q
    |||||||||||||||| ||||||||||||| ||||||||    
T  7354183 attttattttatcttttgttatagaaatagtttatacat 7354145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 24745408 - 24745366
Alignment:
Q  24 attttattttatctttagttatagaaatagcttatacataagc 66  Q
    |||||||||||||||| |||| |||||||||||||| ||||||    
T  24745408 attttattttatcttttgttacagaaatagcttatagataagc 24745366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 24836292 - 24836330
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataa 64  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  24836292 tttattttatcttttgttatagaaataacttatacataa 24836330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 31668781 - 31668819
Alignment:
Q  29 attttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||| ||| |||||||||||||||||||||||||||    
T  31668781 attttatgttttgttatagaaatagcttatacataagca 31668819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 31672049 - 31672007
Alignment:
Q  24 attttattttatctttagttatagaaatagcttatacataagc 66  Q
    |||||||||||||||| |||||||||||| |||||||| ||||    
T  31672049 attttattttatcttttgttatagaaataacttatacagaagc 31672007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 781367 - 781326
Alignment:
Q  21 tttattttattttatctttagttatagaaatagcttatacat 62  Q
    |||| ||||||||||||||  |||||||||||||||||||||    
T  781367 tttactttattttatcttttattatagaaatagcttatacat 781326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 3738029 - 3737992
Alignment:
Q  43 tatagaaatagcttatacataagcaataatacgataag 80  Q
    ||||||||||||||||||||||||| | ||||||||||    
T  3738029 tatagaaatagcttatacataagcactcatacgataag 3737992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 4248935 - 4248894
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| ||||| ||||||||||||| |||||||    
T  4248935 tttattttatcttttgttattgaaatagcttatatataagca 4248894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 8378027 - 8378064
Alignment:
Q  41 gttatagaaatagcttatacataagcaataatacgata 78  Q
    ||||||||||||| ||||||||||||| ||||||||||    
T  8378027 gttatagaaatagattatacataagcattaatacgata 8378064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 20370876 - 20370839
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacata 63  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  20370876 tttattttatcttttgttataaaaatagcttatacata 20370839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 21959705 - 21959664
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| ||||| |||||||||||||| ||||||    
T  21959705 tttattttatcttttgttatggaaatagcttatacttaagca 21959664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 29940773 - 29940732
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| |||||||||| ||||||||| ||||||    
T  29940773 tttattttatcttttgttatagaaaaagcttatacttaagca 29940732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 67
Target Start/End: Original strand, 4003706 - 4003734
Alignment:
Q  39 tagttatagaaatagcttatacataagca 67  Q
    |||||||||||||||||||||||||||||    
T  4003706 tagttatagaaatagcttatacataagca 4003734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 9093649 - 9093689
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagc 66  Q
    |||||||||||||| | |||||||||||||||| |||||||    
T  9093649 tttattttatcttttgatatagaaatagcttatccataagc 9093689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 9559634 - 9559674
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagc 66  Q
    |||||||||||||| | |||||||||| |||||||||||||    
T  9559634 tttattttatcttttgctatagaaataacttatacataagc 9559674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 24476576 - 24476540
Alignment:
Q  29 attttatctttagttatagaaatagcttatacataag 65  Q
    ||||||||||| | |||||||||||||||||||||||    
T  24476576 attttatcttttgctatagaaatagcttatacataag 24476540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 30537037 - 30537073
Alignment:
Q  24 attttattttatctttagttatagaaatagcttatac 60  Q
    |||||||||||||||| |||||||||||||| |||||    
T  30537037 attttattttatcttttgttatagaaatagcatatac 30537073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 33259788 - 33259752
Alignment:
Q  31 tttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  33259788 tttatcttttgttataaaaatagcttatacataagca 33259752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 13224408 - 13224365
Alignment:
Q  24 attttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  13224408 attttattttatcttttgttatagaaatagcttatacataagca 13224365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 7096220 - 7096261
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  7096220 tttattttatcttttgttatagaaatagcttatacataagca 7096261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 20982228 - 20982288
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagcaataatacgataagaactta 86  Q
    ||||||||||| || ||||||||||||||||||||||||||| | ||| |||||| |||||    
T  20982228 tttattttatcctttgttatagaaatagcttatacataagcacttatatgataagcactta 20982288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 12407749 - 12407792
Alignment:
Q  21 tttattttattttatctttagttatagaaatagcttatacataa 64  Q
    |||| |||||||||||||| ||||||||||||||||||||||||    
T  12407749 tttactttattttatcttttgttatagaaatagcttatacataa 12407792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 26516276 - 26516221
Alignment:
Q  25 ttttattttatctttagttatagaaatagcttatacataagcaataatacgataag 80  Q
    ||||||||||||||| ||| ||||||||||||||||||||||| | ||| ||||||    
T  26516276 ttttattttatcttttgttttagaaatagcttatacataagcacttatatgataag 26516221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 12460094 - 12460131
Alignment:
Q  27 ttattttatctttagttatagaaatagcttatacataa 64  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  12460094 ttattttatcttttgttatagaaatagcttatacataa 12460131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 16889707 - 16889666
Alignment:
Q  31 tttatctttagttatagaaatagcttatacataagcaataat 72  Q
    ||||||||| ||||| ||||||||||||||||||||||||||    
T  16889707 tttatcttttgttatggaaatagcttatacataagcaataat 16889666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 37063167 - 37063208
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| ||||||||||||| |||||||||||||    
T  37063167 tttattttatcttttgttatagaaatagtttatacataagca 37063208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 39128616 - 39128575
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| ||||||||| |||||||||||||||||    
T  39128616 tttattttatcttttgttatagaattagcttatacataagca 39128575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 1773521 - 1773557
Alignment:
Q  29 attttatctttagttatagaaatagcttatacataag 65  Q
    ||||||||||| |||||||||||||||||||||||||    
T  1773521 attttatcttttgttatagaaatagcttatacataag 1773557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 11054163 - 11054123
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagc 66  Q
    ||||||||||||||  |||||||||||||||||||||||||    
T  11054163 tttattttatcttttattatagaaatagcttatacataagc 11054123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 29588856 - 29588816
Alignment:
Q  27 ttattttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||||| ||| |||||||||||||||||||||||||||    
T  29588856 ttattttatattttgttatagaaatagcttatacataagca 29588816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 34690851 - 34690812
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataag 65  Q
    |||||||||||||| |||||||||||||| ||||||||||    
T  34690851 tttattttatcttttgttatagaaatagcgtatacataag 34690812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 34117627 - 34117673
Alignment:
Q  27 ttattttatctttagttatagaaatagcttatacataagcaataata 73  Q
    ||||||||||||| |||| ||||||| |||||||||||||| |||||    
T  34117627 ttattttatcttttgttaaagaaataacttatacataagcactaata 34117673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 35135755 - 35135793
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataa 64  Q
    |||||||||||||| |||||||||||| |||||||||||    
T  35135755 tttattttatcttttgttatagaaatatcttatacataa 35135793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 39919738 - 39919780
Alignment:
Q  25 ttttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||| |||||| ||||||||| |||||||||||||||||    
T  39919738 ttttatttaatcttttgttatagaattagcttatacataagca 39919780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 42573866 - 42573912
Alignment:
Q  20 ctttattttattttatctttagttatagaaatagcttatacataagc 66  Q
    |||| |||| ||| |||||| ||||||||||||||||||||||||||    
T  42573866 cttttttttttttaatcttttgttatagaaatagcttatacataagc 42573912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 4014517 - 4014554
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacata 63  Q
    |||||||||||||| | |||||||||||||||||||||    
T  4014517 tttattttatcttttgctatagaaatagcttatacata 4014554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 59
Target Start/End: Complemental strand, 5563681 - 5563648
Alignment:
Q  26 tttattttatctttagttatagaaatagcttata 59  Q
    |||||||||||||| |||||||||||||||||||    
T  5563681 tttattttatcttttgttatagaaatagcttata 5563648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 80
Target Start/End: Complemental strand, 10391329 - 10391276
Alignment:
Q  27 ttattttatctttagttatagaaatagcttatacataagcaataatacgataag 80  Q
    ||||||||||||| |||||| ||||||||||||| |||||| | ||| ||||||    
T  10391329 ttattttatcttttgttataaaaatagcttatacgtaagcacttatatgataag 10391276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 12595544 - 12595585
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| | ||||||||||||||||||| |||||    
T  12595544 tttattttatcttttgctatagaaatagcttatacacaagca 12595585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 28578869 - 28578828
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||  ||||||||||||||||||||| |||||    
T  28578869 tttattttatcttatgttatagaaatagcttatacacaagca 28578828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 29115306 - 29115347
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||||| |||| ||| |||||||||||||||||||||||    
T  29115306 tttattttaccttttgttgtagaaatagcttatacataagca 29115347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 33459028 - 33459069
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||| ||||| |||||||||||| ||||||||||||||    
T  33459028 tttattttgtcttttgttatagaaataacttatacataagca 33459069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 37968865 - 37968828
Alignment:
Q  29 attttatctttagttatagaaatagcttatacataagc 66  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  37968865 attttatcttttgttatagaaatagcttatacctaagc 37968828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 40048373 - 40048414
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| |||||||||| | ||||||||||||||    
T  40048373 tttattttatcttttgttatagaaacaacttatacataagca 40048414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 6593277 - 6593237
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagc 66  Q
    |||||||||||||| ||||||||||| | ||||||||||||    
T  6593277 tttattttatcttttgttatagaaattgtttatacataagc 6593237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 19113211 - 19113263
Alignment:
Q  27 ttattttatctttagttatagaaatagcttatacataagcaataatacgataa 79  Q
    ||||||||| ||| |||||| |||||| ||||||||||||||| ||| |||||    
T  19113211 ttattttattttttgttataaaaatagtttatacataagcaattatatgataa 19113263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 38819672 - 38819708
Alignment:
Q  30 ttttatctttagttatagaaatagcttatacataagc 66  Q
    |||||||||| |||||||||||||| |||||||||||    
T  38819672 ttttatcttttgttatagaaatagcgtatacataagc 38819708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 41159086 - 41159032
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagcaataatacgataag 80  Q
    |||||||||||||||||||||| |||| |||||||||||||| | ||||||||||    
T  41159086 tttattttatctttagttataggaataacttatacataagcacttatacgataag 41159032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 65
Target Start/End: Complemental strand, 44014253 - 44014218
Alignment:
Q  30 ttttatctttagttatagaaatagcttatacataag 65  Q
    ||||||||||||||||||||||||||||||||||||    
T  44014253 ttttatctttagttatagaaatagcttatacataag 44014218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 2128344 - 2128382
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataa 64  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  2128344 tttattttatcttttgttatagaaatagcttatacataa 2128382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 41028944 - 41028998
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagcaataatacgataag 80  Q
    |||||||| ||||| ||||||||||||||||||||||||||| | ||| ||||||    
T  41028944 tttattttttcttttgttatagaaatagcttatacataagcacttatatgataag 41028998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 1395648 - 1395611
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacata 63  Q
    |||||||||||||| |||||||||||||||||||||||    
T  1395648 tttattttatcttttgttatagaaatagcttatacata 1395611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 20192699 - 20192740
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  20192699 tttattttatcttttgttatataaatagcttatacataagca 20192740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 40122845 - 40122898
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagcaataatacgataa 79  Q
    |||||||||||||| ||||| ||||||||||||||||||| | | |||||||||    
T  40122845 tttattttatcttttgttattgaaatagcttatacataagtactgatacgataa 40122898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 905063 - 905103
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagc 66  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  905063 tttattttatcttttgttatagaaatagcttatacttaagc 905103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 16790447 - 16790490
Alignment:
Q  24 attttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| | |||||| ||||||||||||||||||||    
T  16790447 attttattttatctgttgttataaaaatagcttatacataagca 16790490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 50760593 - 50760550
Alignment:
Q  24 attttattttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||||||||||| ||| ||||||||||||||| ||||||||    
T  50760593 attttattttatcttgagtcatagaaatagcttattcataagca 50760550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 52413212 - 52413255
Alignment:
Q  24 attttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||| ||||||| |||||| ||||||||||||||||||||    
T  52413212 attttattctatcttttgttataaaaatagcttatacataagca 52413255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 31053181 - 31053223
Alignment:
Q  24 attttattttatctttagttatagaaatagcttatacataagc 66  Q
    |||||||||||||||| |||||||| |||||||||| ||||||    
T  31053181 attttattttatcttttgttatagatatagcttatatataagc 31053223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 36445709 - 36445671
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataa 64  Q
    |||||||| ||||| ||||||||||||||||||||||||    
T  36445709 tttattttctcttttgttatagaaatagcttatacataa 36445671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 42809276 - 42809242
Alignment:
Q  28 tattttatctttagttatagaaatagcttatacat 62  Q
    |||||||||||| ||||||||||||||||||||||    
T  42809276 tattttatcttttgttatagaaatagcttatacat 42809242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 24 - 58
Target Start/End: Complemental strand, 44295511 - 44295477
Alignment:
Q  24 attttattttatctttagttatagaaatagcttat 58  Q
    ||||||||||||||| |||||||||||||||||||    
T  44295511 attttattttatcttgagttatagaaatagcttat 44295477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 44374737 - 44374791
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagcaataatacgataag 80  Q
    |||||||||||||| |||| ||| |||||||||||||||||| | ||| ||||||    
T  44374737 tttattttatcttttgttaaagatatagcttatacataagcacttatatgataag 44374791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 237379 - 237334
Alignment:
Q  21 tttattttattttatctttagttatagaaatagcttatacataagc 66  Q
    ||||||||||||||||||  ||||||||||||||| ||| ||||||    
T  237379 tttattttattttatcttctgttatagaaatagctcatatataagc 237334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 16790181 - 16790222
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| |||||||||||| |||||| |||||||    
T  16790181 tttattttatcttttgttatagaaataacttatatataagca 16790222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 30574007 - 30574045
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagc 66  Q
    ||||||||||||||  |||||||||||||||||||||||||    
T  30574007 tttattttatcttt--ttatagaaatagcttatacataagc 30574045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 30669064 - 30669101
Alignment:
Q  27 ttattttatctttagttatagaaatagcttatacataa 64  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  30669064 ttattttatcttttgttataaaaatagcttatacataa 30669101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 36887496 - 36887439
Alignment:
Q  29 attttatctttagttatagaaatagcttatacataagcaataatacgataagaactta 86  Q
    ||||||||||| |||||||||||| ||||||||| ||| |||  |||||||| |||||    
T  36887496 attttatcttttgttatagaaataacttatacattagccatatcacgataagcactta 36887439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 42039136 - 42039095
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||| ||| |||| ||||||||||||||||||||||    
T  42039136 tttattttattttttgttacagaaatagcttatacataagca 42039095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 59
Target Start/End: Original strand, 49587009 - 49587042
Alignment:
Q  26 tttattttatctttagttatagaaatagcttata 59  Q
    |||||||||||||| |||||||||||||||||||    
T  49587009 tttattttatcttttgttatagaaatagcttata 49587042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 51278250 - 51278303
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagcaataatacgataa 79  Q
    ||||||| || ||| |||||||||||||||||||||| |||||| ||| |||||    
T  51278250 tttatttaatattttgttatagaaatagcttatacattagcaattatatgataa 51278303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 2304336 - 2304372
Alignment:
Q  28 tattttatctttagttatagaaatagcttatacataa 64  Q
    ||||||||||||  |||||||||||||||||||||||    
T  2304336 tattttatcttttattatagaaatagcttatacataa 2304372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 8007788 - 8007828
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagc 66  Q
    |||| ||||||||| |||||||||| |||||||||||||||    
T  8007788 tttactttatcttttgttatagaaacagcttatacataagc 8007828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 58
Target Start/End: Original strand, 15304440 - 15304472
Alignment:
Q  26 tttattttatctttagttatagaaatagcttat 58  Q
    |||||||||||||| ||||||||||||||||||    
T  15304440 tttattttatcttttgttatagaaatagcttat 15304472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Original strand, 20173982 - 20174022
Alignment:
Q  27 ttattttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||||||||| |||||||||||| || |||||||||||    
T  20173982 ttattttatcttttgttatagaaataactaatacataagca 20174022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 22232803 - 22232743
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagcaataatacgataagaactta 86  Q
    ||||||||||| || |||||| ||||||||||||||| |||| | ||| ||||||| ||||    
T  22232803 tttattttatcatttgttatataaatagcttatacatgagcatttatatgataagagctta 22232743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 25964419 - 25964359
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagcaataatacgataagaactta 86  Q
    |||||||||||||| |||||| |||||||||||||| ||| | | ||| |||||| |||||    
T  25964419 tttattttatcttttgttataaaaatagcttatacaaaagaacttatatgataagcactta 25964359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 27792848 - 27792808
Alignment:
Q  27 ttattttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||||||||| ||| | |||||||||||||||||||||    
T  27792848 ttattttatcttttgtttttgaaatagcttatacataagca 27792808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 35394794 - 35394834
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagc 66  Q
    ||||||||||||||  |||||||||||| ||||||||||||    
T  35394794 tttattttatcttttattatagaaatagattatacataagc 35394834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 42084345 - 42084381
Alignment:
Q  27 ttattttatctttagttatagaaatagcttatacata 63  Q
    |||||||||| || |||||||||||||||||||||||    
T  42084345 ttattttatcctttgttatagaaatagcttatacata 42084381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 43116519 - 43116559
Alignment:
Q  24 attttattttatctttagttatagaaatagcttatacataa 64  Q
    |||| ||||||||||| ||||||||||||||||| ||||||    
T  43116519 atttgattttatcttttgttatagaaatagcttacacataa 43116559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 48528556 - 48528516
Alignment:
Q  25 ttttattttatctttagttatagaaatagcttatacataag 65  Q
    ||||||||||| | | |||||||||||||||||||||||||    
T  48528556 ttttattttatttcttgttatagaaatagcttatacataag 48528516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 49465756 - 49465796
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagc 66  Q
    |||||||||||||| |||||| |||||||||| ||||||||    
T  49465756 tttattttatcttttgttataaaaatagcttacacataagc 49465796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 5133749 - 5133707
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagcaa 68  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  5133749 tttattttatcttttgttatagaaatagcttatacataagcaa 5133707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 25609773 - 25609732
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||||||||||  ||||||||||||||||||||||||||    
T  25609773 tttattttatcttttcttatagaaatagcttatacataagca 25609732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 32098401 - 32098442
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| ||||||||||||||||||| |||||||    
T  32098401 tttattttatcttttgttatagaaatagcttatatataagca 32098442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 34054994 - 34055035
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| |||||||||||||| ||||||||||||    
T  34054994 tttattttatcttttgttatagaaatagcctatacataagca 34055035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 41033047 - 41033084
Alignment:
Q  30 ttttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||| |||||||||||||||||||||||||||    
T  41033047 ttttatcttttgttatagaaatagcttatacataagca 41033084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 17952794 - 17952834
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagc 66  Q
    |||||||||||||| ||||||||||||||||||| ||||||    
T  17952794 tttattttatcttttgttatagaaatagcttatatataagc 17952834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 65
Target Start/End: Original strand, 31740052 - 31740092
Alignment:
Q  26 tttattttatctttagttatagaaatagc-ttatacataag 65  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  31740052 tttattttatctttagttatagaaatagctttatacataag 31740092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 32694191 - 32694151
Alignment:
Q  24 attttattttatctttagttatagaaatagcttatacataa 64  Q
    |||||||||||||||| | ||||||||||||||||||||||    
T  32694191 attttattttatcttttgatatagaaatagcttatacataa 32694151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 10143146 - 10143095
Alignment:
Q  29 attttatctttagttatagaaatagcttatacataagcaataatacgataag 80  Q
    ||||||||||| |||||||||||| |||||||||||||| | || |||||||    
T  10143146 attttatcttttgttatagaaataacttatacataagcacttattcgataag 10143095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 26522715 - 26522758
Alignment:
Q  24 attttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||| ||||||| ||||||||||||| |||||||||||||    
T  26522715 attttattatatcttttgttatagaaatagtttatacataagca 26522758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 38239647 - 38239682
Alignment:
Q  29 attttatctttagttatagaaatagcttatacataa 64  Q
    ||||||||||| ||||||||||||||||||||||||    
T  38239647 attttatcttttgttatagaaatagcttatacataa 38239682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Original strand, 41039737 - 41039780
Alignment:
Q  24 attttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||||| || | ||||||||||||||||||||||    
T  41039737 attttattttatcttttgtcacagaaatagcttatacataagca 41039780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 5045250 - 5045288
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataa 64  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  5045250 tttattttatcttttgttataaaaatagcttatacataa 5045288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 13864627 - 13864589
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataa 64  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  13864627 tttattttaccttttgttatagaaatagcttatacataa 13864589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 31461415 - 31461377
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataa 64  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  31461415 tttattttatcttttgttatagaaatagcttatatataa 31461377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 32364818 - 32364856
Alignment:
Q  27 ttattttatctttagttatagaaatagcttatacataag 65  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  32364818 ttattttatctgaagttatagaaatagcttatacataag 32364856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 80
Target Start/End: Original strand, 33197332 - 33197386
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagcaataatacgataag 80  Q
    |||||| ||||||| ||||||||||||||||||| ||||||| | ||| ||||||    
T  33197332 tttattctatcttttgttatagaaatagcttatagataagcacttatatgataag 33197386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 34339100 - 34339046
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagcaataatacgataag 80  Q
    |||||||||||||||| |||||||| || ||||||||||||| | ||| ||||||    
T  34339100 tttattttatctttagctatagaaaaagtttatacataagcacttatatgataag 34339046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 41809337 - 41809379
Alignment:
Q  27 ttattttatctttagttatagaaatagcttatacataagcaat 69  Q
    ||||||| ||||| ||||||||||||| |||||||||||||||    
T  41809337 ttattttttcttttgttatagaaatagtttatacataagcaat 41809379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 8820368 - 8820405
Alignment:
Q  28 tattttatctttagttatagaaatagcttatacataag 65  Q
    |||||||||||| |||||| ||||||||||||||||||    
T  8820368 tattttatcttttgttatataaatagcttatacataag 8820405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 9878775 - 9878816
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| |||||||||||||||| || |||||||    
T  9878775 tttattttatcttttgttatagaaatagcttttatataagca 9878816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 11393748 - 11393789
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||| ||||||| | |||||||||||||||||||||||||    
T  11393748 tttattgtatcttttggtatagaaatagcttatacataagca 11393789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 11410409 - 11410450
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||| ||||||| | |||||||||||||||||||||||||    
T  11410409 tttattgtatcttttggtatagaaatagcttatacataagca 11410450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 12215784 - 12215743
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| ||| ||||||||| |||||||||||||    
T  12215784 tttattttatcttttgttgtagaaatagtttatacataagca 12215743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 14277987 - 14278028
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||| || ||||||||||||||||| |||||||||||||    
T  14277987 tttatttaatgtttagttatagaaatagtttatacataagca 14278028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 18962131 - 18962172
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| |||||| |||||||| |||||||||||    
T  18962131 tttattttatcttttgttataaaaatagctaatacataagca 18962172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 30990462 - 30990503
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||||||| || |||||||||| ||||||||||||||||    
T  30990462 tttattttatcatttgttatagaaagagcttatacataagca 30990503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 32821787 - 32821746
Alignment:
Q  25 ttttattttatctttagttatagaaatagcttatacataagc 66  Q
    ||||||||||||||| |||||| ||||||||||| |||||||    
T  32821787 ttttattttatcttttgttataaaaatagcttattcataagc 32821746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 32848886 - 32848846
Alignment:
Q  27 ttattttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||||||||| ||||||||||||||| |||| ||||||    
T  32848886 ttattttatcttttgttatagaaatagctaatacgtaagca 32848846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 40837521 - 40837557
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacat 62  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  40837521 tttaatttatcttttgttatagaaatagcttatacat 40837557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 29 - 65
Target Start/End: Original strand, 44786501 - 44786537
Alignment:
Q  29 attttatctttagttatagaaatagcttatacataag 65  Q
    |||||||||||| || |||||||||||||||||||||    
T  44786501 attttatctttaattgtagaaatagcttatacataag 44786537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 1167 - 1208
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  1167 tttattttatcttttgttatagaaatagcttatacataagca 1208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 2808 - 2767
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  2808 tttattttatcttttgttatagaaatagcttatacataagca 2767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000003; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 21593104 - 21593145
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  21593104 tttattttatctttagttatagaaatagtttatacataagca 21593145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 65
Target Start/End: Complemental strand, 6364126 - 6364087
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataag 65  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  6364126 tttattttatcttttgttatagaaatagcttatacataag 6364087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Complemental strand, 47970292 - 47970254
Alignment:
Q  29 attttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  47970292 attttatcttttgttatagaaatagcttatacataagca 47970254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 64
Target Start/End: Original strand, 51044552 - 51044590
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataa 64  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  51044552 tttattttatcttttgttatagaaatagcttatacataa 51044590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 4191712 - 4191675
Alignment:
Q  30 ttttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||| |||||||||||||||||||||||||||    
T  4191712 ttttatcttttgttatagaaatagcttatacataagca 4191675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 4798652 - 4798693
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| | |||||||||||||||||||||||||    
T  4798652 tttattttatcttttgatatagaaatagcttatacataagca 4798693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 25487638 - 25487679
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||| ||| |||||||||||||||||||||||||||    
T  25487638 tttattttattttttgttatagaaatagcttatacataagca 25487679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 17125722 - 17125778
Alignment:
Q  25 ttttattttatctttagttatagaaatagcttatacataagcaataatacgataaga 81  Q
    ||||||||||| ||| |||||| ||||||||||||||||| |||||||  |||||||    
T  17125722 ttttattttatattttgttataaaaatagcttatacataaacaataatgtgataaga 17125778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 2980558 - 2980605
Alignment:
Q  20 ctttattttattttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||||| ||| || ||| |||||||||||||||||||||||||||    
T  2980558 ctttattttgtttcattttttgttatagaaatagcttatacataagca 2980605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 32066497 - 32066556
Alignment:
Q  21 tttattttattttatctttagttatagaaatagcttatacataagcaataatacgataag 80  Q
    |||| |||||||||||||| |||||| || ||| ||||||||||||| | ||||||||||    
T  32066497 tttaatttattttatcttttgttataaaagtagtttatacataagcacttatacgataag 32066556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 24 - 67
Target Start/End: Complemental strand, 50745979 - 50745936
Alignment:
Q  24 attttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||||| |||||| |||||||||| |||||||||    
T  50745979 attttattttatcttttgttataaaaatagcttagacataagca 50745936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 64
Target Start/End: Original strand, 52645845 - 52645880
Alignment:
Q  29 attttatctttagttatagaaatagcttatacataa 64  Q
    ||||||||||| ||||||||||||||||||||||||    
T  52645845 attttatcttttgttatagaaatagcttatacataa 52645880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 67
Target Start/End: Complemental strand, 486059 - 486017
Alignment:
Q  25 ttttattttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||    
T  486059 ttttattttatcttttgttttagaaatagcatatacataagca 486017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 19422395 - 19422341
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagcaataatacgataag 80  Q
    |||||| ||||||| |||||||||||| |||||||||||||| | ||| ||||||    
T  19422395 tttattatatcttttgttatagaaataacttatacataagcatttatatgataag 19422341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 67
Target Start/End: Complemental strand, 24160964 - 24160926
Alignment:
Q  29 attttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||| || |||||||||||||||||||||||||||    
T  24160964 attttatcctttgttatagaaatagcttatacataagca 24160926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Complemental strand, 3155580 - 3155543
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacata 63  Q
    |||||||||||||| | |||||||||||||||||||||    
T  3155580 tttattttatcttttgctatagaaatagcttatacata 3155543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 8422930 - 8422971
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||||||||||  ||||| ||||||||||||||||||||    
T  8422930 tttattttatctttttttataaaaatagcttatacataagca 8422971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 9680641 - 9680600
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||||||||||  |||| |||||||||||||||||||||    
T  9680641 tttattttatcttttattatcgaaatagcttatacataagca 9680600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 17884045 - 17884004
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| ||||||||||||||||| |||| ||||    
T  17884045 tttattttatcttttgttatagaaatagcttacacatgagca 17884004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 30338685 - 30338726
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||| ||||||| ||||||||||||| |||||||||||||    
T  30338685 tttattctatcttttgttatagaaatagtttatacataagca 30338726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 59
Target Start/End: Original strand, 39178343 - 39178376
Alignment:
Q  26 tttattttatctttagttatagaaatagcttata 59  Q
    ||||||||||||| ||||||||||||||||||||    
T  39178343 tttattttatcttgagttatagaaatagcttata 39178376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 64
Target Start/End: Original strand, 42641727 - 42641764
Alignment:
Q  27 ttattttatctttagttatagaaatagcttatacataa 64  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  42641727 ttattttatcttttgttatggaaatagcttatacataa 42641764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 45128401 - 45128442
Alignment:
Q  24 attttattttatctttagttatagaaatagcttatacataag 65  Q
    |||| ||||||||||| ||||||||||||| |||||||||||    
T  45128401 atttgattttatcttttgttatagaaatagtttatacataag 45128442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 51555960 - 51556001
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| ||||||  |||||||||||||||||||    
T  51555960 tttattttatcttttgttataataatagcttatacataagca 51556001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 3176213 - 3176253
Alignment:
Q  24 attttattttatctttagttatagaaatagcttatacataa 64  Q
    ||||||||| |||||| |||||||||||| |||||||||||    
T  3176213 attttatttaatcttttgttatagaaataacttatacataa 3176253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 9843775 - 9843819
Alignment:
Q  42 ttatagaaatagcttatacataagcaataatacgataagaactta 86  Q
    |||||||||||||||||||||||||| | ||| |||||| |||||    
T  9843775 ttatagaaatagcttatacataagcagttatatgataagcactta 9843819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 28623265 - 28623225
Alignment:
Q  27 ttattttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||||||||| |||||| ||||| ||||||||||||||    
T  28623265 ttattttatcttttgttatataaataacttatacataagca 28623225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 30024682 - 30024638
Alignment:
Q  21 tttattttattttatctttagttatagaaatagcttatacataag 65  Q
    |||| |||||||||||||| |||||||||||| ||||| ||||||    
T  30024682 tttactttattttatcttttgttatagaaataacttatgcataag 30024638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 86
Target Start/End: Complemental strand, 30743342 - 30743283
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagcaataatacgataagaactta 86  Q
    |||||||||||||| |||||| ||||| | || ||||||||| ||||||||||||| ||||    
T  30743342 tttattttatcttttgttata-aaataacctacacataagcactaatacgataagagctta 30743283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 66
Target Start/End: Complemental strand, 26215473 - 26215433
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagc 66  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  26215473 tttattttatcttttgttatagaaatagcttatacataagc 26215433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 42597383 - 42597339
Alignment:
Q  21 tttattttattttatctttagttatagaaatagcttatacataag 65  Q
    |||| |||||||||||||| |||||||||||||||||||||||||    
T  42597383 tttactttattttatcttttgttatagaaatagcttatacataag 42597339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 30 - 65
Target Start/End: Original strand, 16163375 - 16163410
Alignment:
Q  30 ttttatctttagttatagaaatagcttatacataag 65  Q
    ||||||||||||||||||||||||||||||||||||    
T  16163375 ttttatctttagttatagaaatagcttatacataag 16163410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 14482179 - 14482125
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagcaataatacgataag 80  Q
    |||||||||||||| ||||||||||||| ||||||||||||| | ||| ||||||    
T  14482179 tttattttatcttttgttatagaaatagtttatacataagcacttatatgataag 14482125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 29592261 - 29592326
Alignment:
Q  21 tttattttattttatctttagttatagaaatagcttatacataagcaataatacgataagaactta 86  Q
    ||||||||||||||| ||| ||| || ||||||||||| || ||||| ||||| ||||||||||||    
T  29592261 tttattttattttatattttgttgtaaaaatagcttatgcagaagcactaatatgataagaactta 29592326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 1112829 - 1112789
Alignment:
Q  27 ttattttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||||||||| |||||||||||||| ||||||||||||    
T  1112829 ttattttatcttttgttatagaaatagcatatacataagca 1112789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 10114466 - 10114426
Alignment:
Q  27 ttattttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||||||||| | |||||||||||||||||||||||||    
T  10114466 ttattttatcttttgctatagaaatagcttatacataagca 10114426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 30627990 - 30628030
Alignment:
Q  21 tttattttattttatctttagttatagaaatagcttataca 61  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  30627990 tttattttattttatcttttgttacagaaatagcttataca 30628030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 44617882 - 44617918
Alignment:
Q  28 tattttatctttagttatagaaatagcttatacataa 64  Q
    |||||||| ||||||||||||||||||||||||||||    
T  44617882 tattttatttttagttatagaaatagcttatacataa 44617918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 64
Target Start/End: Complemental strand, 4558775 - 4558737
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataa 64  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  4558775 tttattttatcttttattatagaaatagcttatacataa 4558737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 11188247 - 11188289
Alignment:
Q  25 ttttattttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||||||||||| |||||||||| | ||||||||||||||    
T  11188247 ttttattttatcttttgttatagaaacaacttatacataagca 11188289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 8194031 - 8194072
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||||| ||||| ||||||||||||||||| ||||||||    
T  8194031 tttattttaactttacttatagaaatagcttatccataagca 8194072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 14949863 - 14949826
Alignment:
Q  28 tattttatctttagttatagaaatagcttatacataag 65  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  14949863 tattttatcttttgttatagaagtagcttatacataag 14949826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 29699231 - 29699190
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| |||||||||||| ||| ||||||||||    
T  29699231 tttattttatcttttgttatagaaataacttgtacataagca 29699190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 35298571 - 35298612
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| ||||  |||||||||||||||||||||    
T  35298571 tttattttatcttttgttactgaaatagcttatacataagca 35298612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 39392754 - 39392791
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacata 63  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  39392754 tttattttatcttttgttatagaaatagtttatacata 39392791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 62
Target Start/End: Original strand, 1470949 - 1470985
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacat 62  Q
    ||||||||||||||  |||||||||||||||||||||    
T  1470949 tttattttatcttttattatagaaatagcttatacat 1470985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 67
Target Start/End: Complemental strand, 1561251 - 1561215
Alignment:
Q  31 tttatctttagttatagaaatagcttatacataagca 67  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  1561251 tttatctttcgttatagaaataacttatacataagca 1561215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 9956905 - 9956945
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagc 66  Q
    |||||||||||||| ||||||||||||||| | ||||||||    
T  9956905 tttattttatcttttgttatagaaatagctcaaacataagc 9956945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 11119092 - 11119132
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagc 66  Q
    |||||||||||||| |||||||||||| | |||||||||||    
T  11119092 tttattttatcttttgttatagaaatatcgtatacataagc 11119132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 62
Target Start/End: Complemental strand, 32976394 - 32976358
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacat 62  Q
    |||||||||||||| |||||||||||||| |||||||    
T  32976394 tttattttatcttttgttatagaaatagcgtatacat 32976358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 26 - 66
Target Start/End: Original strand, 37444508 - 37444548
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagc 66  Q
    |||| ||||||||| ||||||| ||||||||||||||||||    
T  37444508 tttactttatcttttgttatagtaatagcttatacataagc 37444548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 20156 - 20115
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
    |||||||||||||| |||||||||||||  ||||||||||||    
T  20156 tttattttatctttggttatagaaatagtatatacataagca 20115  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 67
Target Start/End: Complemental strand, 27553 - 27512
Alignment:
Q  26 tttattttatctttagttatagaaatagcttatacataagca 67  Q
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T  27553 tttattttatcttctgttatagaaataacttatacataagca 27512  T

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