View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3466_low_2 (Length: 364)

Name: NF3466_low_2
Description: NF3466
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3466_low_2
NF3466_low_2
[»] chr8 (69 HSPs)
chr8 (1-201)||(38855134-38855334)
chr8 (1-201)||(6520406-6520606)
chr8 (198-364)||(38854918-38855084)
chr8 (3-185)||(21673744-21673927)
chr8 (1-176)||(23760751-23760927)
chr8 (5-199)||(21285639-21285834)
chr8 (199-364)||(39834120-39834286)
chr8 (198-362)||(21673992-21674157)
chr8 (201-364)||(23760507-23760671)
chr8 (1-127)||(26355656-26355781)
chr8 (201-364)||(6520658-6520822)
chr8 (199-364)||(26355365-26355531)
chr8 (226-357)||(19801101-19801233)
chr8 (1-142)||(5866218-5866357)
chr8 (1-142)||(21491033-21491172)
chr8 (1-142)||(17140954-17141093)
chr8 (44-199)||(17266876-17267032)
chr8 (44-199)||(37116430-37116586)
chr8 (1-176)||(983312-983489)
chr8 (201-301)||(21285888-21285989)
chr8 (1-123)||(17439465-17439590)
chr8 (31-142)||(21249453-21249562)
chr8 (31-142)||(21255291-21255400)
chr8 (1-123)||(17612069-17612193)
chr8 (44-197)||(22364744-22364897)
chr8 (1-123)||(13508044-13508168)
chr8 (1-123)||(20498600-20498724)
chr8 (1-123)||(13597576-13597700)
chr8 (44-176)||(24353103-24353235)
chr8 (44-91)||(40492844-40492891)
chr8 (198-360)||(41598472-41598634)
chr8 (1-89)||(22626774-22626861)
chr8 (321-360)||(5865948-5865987)
chr8 (321-360)||(7373160-7373199)
chr8 (321-360)||(17141324-17141363)
chr8 (321-360)||(18878908-18878947)
chr8 (321-360)||(21491403-21491442)
chr8 (321-360)||(22627146-22627185)
chr8 (321-360)||(23406792-23406831)
chr8 (321-360)||(45130702-45130741)
chr8 (326-360)||(17085770-17085804)
chr8 (326-364)||(17266583-17266621)
chr8 (326-360)||(20499076-20499110)
chr8 (323-360)||(18818081-18818118)
chr8 (321-360)||(6759668-6759707)
chr8 (321-360)||(16092012-16092051)
chr8 (321-360)||(20536619-20536658)
chr8 (321-360)||(23648964-23649003)
chr8 (289-360)||(24353479-24353550)
chr8 (321-360)||(28648715-28648754)
chr8 (326-364)||(16799982-16800020)
chr8 (1-35)||(21389499-21389533)
chr8 (318-364)||(21414894-21414940)
chr8 (1-35)||(21778825-21778859)
chr8 (31-89)||(22875132-22875190)
chr8 (201-267)||(23406670-23406736)
chr8 (322-360)||(31971656-31971694)
chr8 (326-360)||(37116840-37116874)
chr8 (327-360)||(13507680-13507713)
chr8 (327-360)||(13597212-13597245)
chr8 (1-89)||(16092337-16092425)
chr8 (226-267)||(20536522-20536563)
chr8 (39-127)||(21383887-21383975)
chr8 (226-267)||(21918766-21918807)
chr8 (224-265)||(22419182-22419223)
chr8 (45-123)||(25484279-25484359)
chr8 (225-266)||(37116663-37116704)
chr8 (45-130)||(4483358-4483445)
chr8 (45-130)||(22001831-22001918)
[»] chr1 (68 HSPs)
chr1 (1-201)||(22921751-22921952)
chr1 (198-361)||(20637137-20637301)
chr1 (198-364)||(35981353-35981520)
chr1 (200-364)||(22921534-22921699)
chr1 (1-127)||(33681045-33681172)
chr1 (198-364)||(28194115-28194282)
chr1 (1-126)||(22237665-22237791)
chr1 (1-117)||(21754083-21754198)
chr1 (198-361)||(22237917-22238080)
chr1 (70-201)||(35981570-35981701)
chr1 (1-124)||(20248317-20248438)
chr1 (70-201)||(49261447-49261578)
chr1 (201-364)||(52927648-52927812)
chr1 (203-364)||(33681301-33681463)
chr1 (1-127)||(14295510-14295634)
chr1 (198-364)||(20248564-20248731)
chr1 (71-201)||(20636957-20637087)
chr1 (1-140)||(20918642-20918779)
chr1 (1-127)||(52927938-52928053)
chr1 (12-199)||(21861453-21861642)
chr1 (44-199)||(50686694-50686850)
chr1 (226-364)||(21754351-21754489)
chr1 (1-199)||(21896142-21896339)
chr1 (198-260)||(49261628-49261690)
chr1 (30-127)||(51130631-51130726)
chr1 (44-199)||(16368170-16368324)
chr1 (44-199)||(50613999-50614155)
chr1 (44-199)||(50621827-50621983)
chr1 (16-140)||(22130853-22130975)
chr1 (1-76)||(35261086-35261161)
chr1 (1-123)||(16758687-16758812)
chr1 (31-127)||(21161783-21161878)
chr1 (44-177)||(41049941-41050074)
chr1 (198-266)||(26065227-26065295)
chr1 (285-364)||(43697735-43697814)
chr1 (44-123)||(16093843-16093923)
chr1 (321-360)||(20919012-20919051)
chr1 (321-360)||(22355856-22355895)
chr1 (321-360)||(22357542-22357581)
chr1 (321-360)||(22532680-22532719)
chr1 (321-360)||(27250411-27250450)
chr1 (321-360)||(34510191-34510230)
chr1 (321-364)||(38801069-38801112)
chr1 (296-359)||(50209885-50209948)
chr1 (1-123)||(45574846-45574970)
chr1 (288-357)||(21895906-21895975)
chr1 (288-357)||(26065372-26065441)
chr1 (288-360)||(16367881-16367953)
chr1 (324-360)||(21301209-21301245)
chr1 (44-123)||(26065021-26065100)
chr1 (226-360)||(433322-433457)
chr1 (321-360)||(20135598-20135637)
chr1 (321-360)||(20846901-20846940)
chr1 (326-357)||(35260729-35260760)
chr1 (322-360)||(16381652-16381690)
chr1 (326-364)||(16759142-16759180)
chr1 (326-364)||(27652812-27652850)
chr1 (326-364)||(41049635-41049673)
chr1 (326-364)||(48521060-48521098)
chr1 (326-360)||(52940472-52940506)
chr1 (224-265)||(20918915-20918956)
chr1 (288-357)||(21861168-21861237)
chr1 (228-265)||(21861335-21861372)
chr1 (198-251)||(35260860-35260913)
chr1 (226-267)||(38801157-38801198)
chr1 (1-85)||(50210212-50210296)
chr1 (42-123)||(433085-433168)
chr1 (288-360)||(50687046-50687118)
[»] chr2 (57 HSPs)
chr2 (1-201)||(25175888-25176089)
chr2 (1-201)||(28406014-28406216)
chr2 (197-364)||(25176128-25176296)
chr2 (1-198)||(7617-7816)
chr2 (1-127)||(7679623-7679749)
chr2 (1-198)||(18786787-18786986)
chr2 (198-364)||(23708286-23708451)
chr2 (1-117)||(22134175-22134289)
chr2 (1-142)||(23071893-23072032)
chr2 (44-198)||(23791356-23791511)
chr2 (1-123)||(19671868-19671991)
chr2 (227-360)||(22133888-22134020)
chr2 (1-199)||(23207315-23207515)
chr2 (1-123)||(23708578-23708702)
chr2 (44-199)||(25108970-25109126)
chr2 (229-360)||(28406297-28406429)
chr2 (44-123)||(20520152-20520231)
chr2 (1-123)||(22413095-22413221)
chr2 (48-127)||(23004835-23004915)
chr2 (296-360)||(23660408-23660472)
chr2 (44-123)||(24697565-24697645)
chr2 (321-360)||(298486-298525)
chr2 (321-360)||(22730904-22730943)
chr2 (321-360)||(23071634-23071673)
chr2 (1-123)||(22105447-22105571)
chr2 (326-364)||(23005221-23005259)
chr2 (201-267)||(23076731-23076797)
chr2 (322-360)||(39827610-39827648)
chr2 (323-360)||(37798-37835)
chr2 (1-89)||(298809-298898)
chr2 (326-357)||(20519790-20519821)
chr2 (321-360)||(22737851-22737890)
chr2 (321-360)||(23076851-23076890)
chr2 (326-357)||(23207770-23207801)
chr2 (321-360)||(23286261-23286300)
chr2 (321-360)||(23654081-23654120)
chr2 (321-360)||(27753986-27754025)
chr2 (321-360)||(28291973-28292012)
chr2 (223-262)||(31756229-31756268)
chr2 (325-360)||(32451600-32451635)
chr2 (326-360)||(34137412-34137446)
chr2 (226-267)||(298580-298621)
chr2 (288-357)||(22412733-22412802)
chr2 (201-266)||(23207569-23207634)
chr2 (198-266)||(20519957-20520025)
chr2 (45-130)||(23130940-23131027)
chr2 (45-130)||(23133407-23133494)
chr2 (1-89)||(23660061-23660148)
chr2 (45-130)||(24898192-24898279)
chr2 (45-130)||(24900675-24900762)
chr2 (45-130)||(24903152-24903239)
chr2 (45-130)||(24905629-24905716)
chr2 (45-130)||(24908104-24908191)
chr2 (45-130)||(26505457-26505544)
chr2 (45-130)||(26507935-26508022)
chr2 (48-123)||(31345201-31345277)
chr2 (45-130)||(34402519-34402606)
[»] scaffold0102 (2 HSPs)
scaffold0102 (1-201)||(19302-19503)
scaffold0102 (203-364)||(19558-19720)
[»] chr7 (82 HSPs)
chr7 (1-201)||(67783-67983)
chr7 (1-201)||(16219599-16219800)
chr7 (1-201)||(18005684-18005885)
chr7 (198-364)||(47832096-47832262)
chr7 (1-201)||(47831845-47832046)
chr7 (1-201)||(811013-811214)
chr7 (1-185)||(44014216-44014398)
chr7 (198-364)||(9389362-9389529)
chr7 (1-199)||(16056366-16056564)
chr7 (198-364)||(68033-68200)
chr7 (198-364)||(44014461-44014628)
chr7 (201-364)||(16324296-16324460)
chr7 (1-196)||(22072951-22073149)
chr7 (201-364)||(16219383-16219547)
chr7 (198-360)||(12255462-12255624)
chr7 (201-362)||(22073206-22073368)
chr7 (1-142)||(15754831-15754970)
chr7 (1-198)||(12901361-12901560)
chr7 (201-360)||(16056618-16056778)
chr7 (1-127)||(16495440-16495564)
chr7 (1-142)||(11995971-11996110)
chr7 (1-142)||(34200824-34200963)
chr7 (226-360)||(2279789-2279924)
chr7 (198-364)||(18005934-18006095)
chr7 (226-364)||(810796-810935)
chr7 (70-201)||(9389579-9389710)
chr7 (1-89)||(2280114-2280202)
chr7 (1-142)||(28505242-28505381)
chr7 (1-86)||(12255789-12255876)
chr7 (1-123)||(15008458-15008582)
chr7 (226-360)||(12756388-12756522)
chr7 (1-199)||(20220073-20220271)
chr7 (1-123)||(1867954-1868078)
chr7 (129-201)||(16324172-16324244)
chr7 (226-360)||(17061631-17061766)
chr7 (321-364)||(11995725-11995768)
chr7 (230-364)||(21064829-21064964)
chr7 (321-364)||(28504968-28505011)
chr7 (47-127)||(14044832-14044913)
chr7 (47-127)||(14354862-14354943)
chr7 (226-359)||(15143709-15143843)
chr7 (1-89)||(10063813-10063901)
chr7 (288-364)||(14045202-14045278)
chr7 (288-364)||(14355232-14355308)
chr7 (296-360)||(38227866-38227930)
chr7 (321-360)||(3564035-3564074)
chr7 (321-360)||(9509600-9509639)
chr7 (321-360)||(12699243-12699282)
chr7 (321-360)||(15754558-15754597)
chr7 (321-360)||(16385929-16385968)
chr7 (42-130)||(18430787-18430877)
chr7 (321-360)||(40443788-40443827)
chr7 (326-364)||(9177256-9177294)
chr7 (1-123)||(13647363-13647487)
chr7 (224-265)||(9177431-9177472)
chr7 (288-357)||(12901783-12901852)
chr7 (288-364)||(1867653-1867729)
chr7 (21-123)||(19486703-19486807)
chr7 (1-89)||(38227519-38227606)
chr7 (321-360)||(27847515-27847554)
chr7 (326-360)||(2529648-2529682)
chr7 (321-359)||(2831978-2832016)
chr7 (321-359)||(9751222-9751260)
chr7 (326-360)||(11768534-11768568)
chr7 (326-364)||(14036690-14036728)
chr7 (198-264)||(14045036-14045102)
chr7 (326-364)||(14346720-14346758)
chr7 (198-264)||(14355066-14355132)
chr7 (327-357)||(15008118-15008148)
chr7 (321-359)||(39267318-39267356)
chr7 (321-359)||(44116915-44116953)
chr7 (1-89)||(26212034-26212122)
chr7 (226-267)||(26212310-26212351)
chr7 (210-267)||(44116804-44116861)
chr7 (48-123)||(1858791-1858867)
chr7 (198-266)||(14036486-14036554)
chr7 (198-266)||(14346516-14346584)
chr7 (45-130)||(14949119-14949206)
chr7 (198-266)||(15008263-15008331)
chr7 (48-84)||(16324135-16324171)
chr7 (225-265)||(18302493-18302533)
chr7 (21-89)||(18456408-18456476)
[»] scaffold0621 (5 HSPs)
scaffold0621 (1-185)||(6573-6758)
scaffold0621 (198-360)||(6823-6987)
scaffold0621 (1-118)||(8504-8623)
scaffold0621 (226-265)||(8785-8824)
scaffold0621 (326-360)||(8961-8995)
[»] scaffold0023 (4 HSPs)
scaffold0023 (1-201)||(100412-100613)
scaffold0023 (1-201)||(40056-40257)
scaffold0023 (198-339)||(39864-40006)
scaffold0023 (297-362)||(101781-101846)
[»] scaffold0078 (2 HSPs)
scaffold0078 (6-199)||(10570-10764)
scaffold0078 (201-364)||(10818-10982)
[»] scaffold0138 (3 HSPs)
scaffold0138 (201-364)||(13230-13394)
scaffold0138 (4-201)||(12980-13178)
scaffold0138 (44-199)||(18121-18277)
[»] chr4 (63 HSPs)
chr4 (198-364)||(39705955-39706121)
chr4 (1-193)||(39706179-39706371)
chr4 (198-364)||(15099637-15099804)
chr4 (1-198)||(12288094-12288293)
chr4 (199-364)||(8846662-8846829)
chr4 (1-117)||(12774045-12774160)
chr4 (70-201)||(15099456-15099587)
chr4 (70-201)||(15190423-15190554)
chr4 (198-364)||(15190604-15190771)
chr4 (198-360)||(15464600-15464763)
chr4 (198-356)||(52242868-52243026)
chr4 (1-142)||(16596686-16596825)
chr4 (1-141)||(15551855-15551993)
chr4 (224-364)||(13844852-13844993)
chr4 (240-364)||(43198255-43198380)
chr4 (1-123)||(13810-13934)
chr4 (52-127)||(8846461-8846537)
chr4 (1-86)||(52243192-52243279)
chr4 (44-199)||(53082035-53082190)
chr4 (226-364)||(12774314-12774452)
chr4 (44-199)||(46640339-46640494)
chr4 (1-123)||(43198512-43198638)
chr4 (198-364)||(44928590-44928756)
chr4 (45-86)||(15464929-15464970)
chr4 (198-267)||(21815396-21815464)
chr4 (1-49)||(8846394-8846442)
chr4 (288-360)||(15868306-15868378)
chr4 (296-360)||(16597031-16597095)
chr4 (321-364)||(3097043-3097086)
chr4 (321-360)||(15552224-15552263)
chr4 (321-360)||(16239663-16239702)
chr4 (321-359)||(12903157-12903195)
chr4 (321-359)||(17046727-17046765)
chr4 (198-264)||(21815070-21815135)
chr4 (198-264)||(21818492-21818557)
chr4 (288-360)||(13444-13516)
chr4 (321-357)||(7089277-7089313)
chr4 (1-85)||(16377522-16377604)
chr4 (226-265)||(13616-13655)
chr4 (198-265)||(3332173-3332240)
chr4 (325-360)||(6190848-6190883)
chr4 (321-360)||(14039060-14039099)
chr4 (321-360)||(14052984-14053023)
chr4 (321-360)||(21814974-21815013)
chr4 (321-360)||(21818396-21818435)
chr4 (198-265)||(24029029-24029096)
chr4 (321-359)||(20156962-20157000)
chr4 (326-360)||(32306590-32306624)
chr4 (226-267)||(7089191-7089232)
chr4 (160-201)||(12774195-12774236)
chr4 (323-364)||(17047751-17047792)
chr4 (226-267)||(17047838-17047879)
chr4 (323-360)||(21815303-21815340)
chr4 (321-358)||(22633886-22633923)
chr4 (327-360)||(32851868-32851901)
chr4 (226-267)||(44102525-44102566)
chr4 (45-123)||(51463872-51463952)
chr4 (288-357)||(53081771-53081840)
chr4 (288-364)||(12287800-12287876)
chr4 (45-89)||(14280394-14280438)
chr4 (45-130)||(44615366-44615453)
chr4 (45-130)||(50222336-50222423)
chr4 (45-89)||(54798749-54798793)
[»] scaffold0278 (2 HSPs)
scaffold0278 (1-197)||(5681-5877)
scaffold0278 (285-364)||(5968-6047)
[»] scaffold0207 (2 HSPs)
scaffold0207 (1-201)||(2527-2728)
scaffold0207 (198-364)||(2311-2477)
[»] chr3 (98 HSPs)
chr3 (198-364)||(15471212-15471378)
chr3 (1-201)||(15470962-15471162)
chr3 (1-201)||(14234525-14234728)
chr3 (198-364)||(1465076-1465243)
chr3 (198-361)||(14234778-14234941)
chr3 (1-201)||(16097366-16097567)
chr3 (1-117)||(32307715-32307830)
chr3 (1-127)||(16103818-16103944)
chr3 (1-127)||(12174218-12174342)
chr3 (201-360)||(324525-324685)
chr3 (1-141)||(13210272-13210410)
chr3 (1-117)||(1644642-1644756)
chr3 (1-116)||(49668044-49668159)
chr3 (1-123)||(52523686-52523812)
chr3 (199-364)||(16097618-16097784)
chr3 (70-201)||(1465293-1465424)
chr3 (1-114)||(9512958-9513067)
chr3 (1-114)||(9520933-9521042)
chr3 (198-360)||(52523398-52523560)
chr3 (198-364)||(2050868-2051032)
chr3 (1-199)||(37251051-37251251)
chr3 (196-364)||(17247953-17248121)
chr3 (229-364)||(49389311-49389446)
chr3 (226-364)||(1644350-1644488)
chr3 (226-364)||(12933977-12934116)
chr3 (226-360)||(32307984-32308118)
chr3 (198-267)||(12171869-12171938)
chr3 (198-360)||(53070370-53070531)
chr3 (1-89)||(23274725-23274813)
chr3 (1-123)||(24340682-24340806)
chr3 (44-123)||(43926041-43926121)
chr3 (226-360)||(49667754-49667889)
chr3 (26-123)||(2051158-2051259)
chr3 (318-364)||(12171784-12171830)
chr3 (1-89)||(53301545-53301634)
chr3 (316-364)||(16104186-16104234)
chr3 (296-360)||(18438920-18438984)
chr3 (1-89)||(27165285-27165373)
chr3 (198-363)||(42386699-42386864)
chr3 (72-127)||(49389586-49389642)
chr3 (226-359)||(14572903-14573037)
chr3 (326-364)||(22109942-22109980)
chr3 (319-360)||(9513319-9513360)
chr3 (319-360)||(9521294-9521335)
chr3 (44-199)||(22110235-22110390)
chr3 (21-123)||(22147484-22147588)
chr3 (21-123)||(37642224-37642328)
chr3 (2-89)||(42386449-42386536)
chr3 (321-360)||(14179733-14179772)
chr3 (198-265)||(14665893-14665960)
chr3 (198-265)||(14735406-14735473)
chr3 (321-360)||(14973265-14973304)
chr3 (321-364)||(17247187-17247230)
chr3 (321-360)||(40213392-40213431)
chr3 (326-364)||(316612-316650)
chr3 (321-359)||(17488268-17488306)
chr3 (321-359)||(17499750-17499788)
chr3 (223-264)||(606135-606176)
chr3 (323-360)||(11424434-11424471)
chr3 (1-89)||(12399247-12399335)
chr3 (323-360)||(12399608-12399645)
chr3 (198-263)||(13210096-13210161)
chr3 (323-360)||(13442687-13442724)
chr3 (201-266)||(37250932-37250997)
chr3 (327-360)||(43927597-43927630)
chr3 (319-359)||(9578087-9578127)
chr3 (21-89)||(24153204-24153272)
chr3 (44-79)||(12378004-12378039)
chr3 (321-360)||(20698118-20698157)
chr3 (321-364)||(25476052-25476095)
chr3 (321-360)||(26687298-26687337)
chr3 (321-360)||(43842589-43842628)
chr3 (321-359)||(4588487-4588525)
chr3 (225-267)||(11424528-11424570)
chr3 (321-359)||(12340163-12340201)
chr3 (296-358)||(12852037-12852099)
chr3 (326-360)||(14501615-14501649)
chr3 (1-123)||(17672661-17672784)
chr3 (1-82)||(18438572-18438653)
chr3 (31-89)||(21618512-21618570)
chr3 (224-266)||(22110116-22110158)
chr3 (326-360)||(23275157-23275191)
chr3 (31-89)||(36166661-36166719)
chr3 (326-360)||(45797659-45797693)
chr3 (44-85)||(606324-606364)
chr3 (45-123)||(7781351-7781431)
chr3 (1-89)||(14972892-14972980)
chr3 (160-201)||(16103977-16104018)
chr3 (45-123)||(43550482-43550562)
chr3 (288-360)||(605962-606034)
chr3 (48-123)||(5223388-5223464)
chr3 (225-265)||(12340067-12340107)
chr3 (45-130)||(13151787-13151874)
chr3 (45-130)||(13154252-13154339)
chr3 (45-130)||(16454278-16454365)
chr3 (45-130)||(34159404-34159491)
chr3 (147-199)||(43927318-43927370)
chr3 (45-130)||(55476569-55476656)
[»] scaffold0530 (2 HSPs)
scaffold0530 (1-201)||(917-1117)
scaffold0530 (198-364)||(695-867)
[»] scaffold0243 (2 HSPs)
scaffold0243 (1-197)||(6009-6206)
scaffold0243 (198-364)||(5789-5955)
[»] chr5 (62 HSPs)
chr5 (1-199)||(21329381-21329580)
chr5 (198-364)||(5888842-5889009)
chr5 (198-361)||(21741213-21741377)
chr5 (1-197)||(21502041-21502239)
chr5 (1-201)||(26011917-26012118)
chr5 (1-127)||(21565580-21565707)
chr5 (1-127)||(22959491-22959615)
chr5 (198-364)||(22959200-22959367)
chr5 (1-199)||(20026824-20027024)
chr5 (199-364)||(21565832-21565998)
chr5 (4-127)||(19668939-19669060)
chr5 (198-364)||(21329162-21329329)
chr5 (198-360)||(22144338-22144500)
chr5 (201-357)||(26011708-26011865)
chr5 (1-199)||(22178103-22178304)
chr5 (198-364)||(19669186-19669354)
chr5 (1-123)||(22144087-22144211)
chr5 (70-127)||(21741489-21741546)
chr5 (1-142)||(19660779-19660918)
chr5 (285-364)||(21498684-21498763)
chr5 (1-64)||(36314615-36314678)
chr5 (44-117)||(29448085-29448159)
chr5 (198-360)||(11580916-11581078)
chr5 (21-123)||(40725911-40726015)
chr5 (204-360)||(1096760-1096917)
chr5 (201-268)||(21501918-21501984)
chr5 (203-267)||(21871336-21871400)
chr5 (203-267)||(21875616-21875680)
chr5 (296-360)||(21985818-21985882)
chr5 (1-89)||(22412222-22412309)
chr5 (226-360)||(36154499-36154634)
chr5 (321-360)||(19660508-19660547)
chr5 (321-360)||(23390167-23390206)
chr5 (326-360)||(20026534-20026568)
chr5 (1-89)||(1096505-1096593)
chr5 (323-360)||(9078365-9078402)
chr5 (321-360)||(21292652-21292691)
chr5 (321-360)||(21871242-21871281)
chr5 (321-360)||(21875522-21875561)
chr5 (321-360)||(22075419-22075458)
chr5 (198-265)||(22119959-22120026)
chr5 (321-360)||(24529632-24529671)
chr5 (321-360)||(25421943-25421982)
chr5 (321-360)||(25431805-25431844)
chr5 (225-264)||(25744035-25744074)
chr5 (31-89)||(20766115-20766173)
chr5 (321-359)||(22107056-22107094)
chr5 (321-359)||(22119865-22119903)
chr5 (326-360)||(22177814-22177848)
chr5 (326-360)||(26732429-26732463)
chr5 (326-360)||(26740242-26740276)
chr5 (1-89)||(21729059-21729147)
chr5 (1-89)||(21808384-21808472)
chr5 (1-89)||(22075057-22075145)
chr5 (327-360)||(25574064-25574097)
chr5 (327-360)||(25575257-25575290)
chr5 (327-360)||(25576450-25576483)
chr5 (224-252)||(15796735-15796763)
chr5 (45-130)||(20909090-20909177)
chr5 (21-89)||(24493626-24493694)
chr5 (45-130)||(39363462-39363549)
chr5 (45-130)||(42245362-42245449)
[»] scaffold1257 (1 HSPs)
scaffold1257 (19-201)||(2100-2283)
[»] scaffold0476 (2 HSPs)
scaffold0476 (1-201)||(12804-13005)
scaffold0476 (326-363)||(13259-13296)
[»] scaffold0333 (4 HSPs)
scaffold0333 (1-201)||(6649-6850)
scaffold0333 (1-201)||(14029-14230)
scaffold0333 (198-364)||(6900-7067)
scaffold0333 (198-364)||(14280-14447)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-201)||(14579-14780)
[»] chr6 (68 HSPs)
chr6 (1-201)||(23019444-23019645)
chr6 (1-127)||(19652233-19652358)
chr6 (224-364)||(22080404-22080545)
chr6 (1-142)||(1561341-1561480)
chr6 (1-199)||(19668409-19668609)
chr6 (198-364)||(19652482-19652649)
chr6 (226-360)||(23019722-23019857)
chr6 (26-201)||(22080621-22080796)
chr6 (1-142)||(28496415-28496554)
chr6 (1-142)||(29808826-29808965)
chr6 (201-360)||(27332955-27333115)
chr6 (201-360)||(27393695-27393855)
chr6 (226-364)||(25644637-25644776)
chr6 (203-360)||(4667884-4668042)
chr6 (1-64)||(27333238-27333301)
chr6 (1-64)||(27393978-27394041)
chr6 (1-127)||(9098469-9098597)
chr6 (1-118)||(20109176-20109295)
chr6 (203-267)||(4185588-4185652)
chr6 (3-78)||(4185827-4185902)
chr6 (203-360)||(4189248-4189406)
chr6 (203-360)||(4674731-4674889)
chr6 (201-360)||(18457006-18457164)
chr6 (224-361)||(25956291-25956429)
chr6 (21-123)||(8227470-8227574)
chr6 (321-364)||(20360638-20360681)
chr6 (21-78)||(4668217-4668274)
chr6 (21-78)||(4675064-4675121)
chr6 (226-360)||(28496144-28496279)
chr6 (1-85)||(19303540-19303623)
chr6 (321-360)||(1561714-1561753)
chr6 (31-78)||(4186435-4186482)
chr6 (321-360)||(17287467-17287506)
chr6 (321-360)||(19303212-19303251)
chr6 (321-360)||(20637965-20638004)
chr6 (321-360)||(22779898-22779937)
chr6 (1-86)||(25644358-25644444)
chr6 (31-127)||(31155355-31155450)
chr6 (223-264)||(17106045-17106086)
chr6 (201-266)||(19668663-19668728)
chr6 (44-123)||(18696569-18696648)
chr6 (44-123)||(18706387-18706466)
chr6 (226-360)||(29808554-29808690)
chr6 (326-361)||(18696979-18697014)
chr6 (325-360)||(18821501-18821536)
chr6 (326-357)||(20109631-20109662)
chr6 (225-267)||(18821585-18821627)
chr6 (325-359)||(25603057-25603091)
chr6 (325-359)||(25611395-25611429)
chr6 (326-364)||(35008642-35008680)
chr6 (1-89)||(16496282-16496370)
chr6 (231-264)||(18177438-18177471)
chr6 (231-264)||(18204400-18204433)
chr6 (321-358)||(21939794-21939831)
chr6 (1-85)||(29060578-29060662)
chr6 (319-360)||(33443530-33443571)
chr6 (45-130)||(2291177-2291264)
chr6 (223-267)||(16830108-16830152)
chr6 (45-130)||(18334589-18334676)
chr6 (296-360)||(18409498-18409562)
chr6 (225-265)||(21939698-21939738)
chr6 (45-123)||(22782305-22782385)
chr6 (48-123)||(23414969-23415045)
chr6 (223-267)||(25611489-25611533)
chr6 (45-85)||(25629354-25629394)
chr6 (45-130)||(26924637-26924724)
chr6 (324-360)||(29060954-29060990)
chr6 (224-264)||(35008463-35008503)
[»] scaffold1984 (2 HSPs)
scaffold1984 (1-125)||(167-292)
scaffold1984 (203-361)||(422-581)
[»] scaffold0810 (1 HSPs)
scaffold0810 (198-364)||(3219-3386)
[»] scaffold0028 (8 HSPs)
scaffold0028 (1-201)||(62236-62434)
scaffold0028 (226-364)||(132968-133107)
scaffold0028 (1-114)||(132696-132809)
scaffold0028 (45-130)||(134289-134376)
scaffold0028 (45-130)||(136758-136845)
scaffold0028 (45-130)||(139227-139314)
scaffold0028 (45-130)||(141696-141783)
scaffold0028 (45-130)||(144165-144252)
[»] scaffold0555 (3 HSPs)
scaffold0555 (1-127)||(10497-10624)
scaffold0555 (319-364)||(10235-10280)
scaffold0555 (201-274)||(10298-10371)
[»] scaffold0034 (3 HSPs)
scaffold0034 (1-199)||(32574-32772)
scaffold0034 (201-357)||(32826-32983)
scaffold0034 (325-360)||(51555-51590)
[»] scaffold0020 (3 HSPs)
scaffold0020 (199-364)||(15497-15663)
scaffold0020 (1-69)||(15792-15860)
scaffold0020 (149-201)||(15714-15766)
[»] scaffold0556 (4 HSPs)
scaffold0556 (45-196)||(8097-8249)
scaffold0556 (4-201)||(6853-7048)
scaffold0556 (198-364)||(7098-7265)
scaffold0556 (201-364)||(8306-8470)
[»] scaffold0010 (6 HSPs)
scaffold0010 (1-127)||(129943-130070)
scaffold0010 (198-364)||(130194-130361)
scaffold0010 (198-266)||(60479-60547)
scaffold0010 (1-86)||(60713-60799)
scaffold0010 (326-357)||(60312-60343)
scaffold0010 (160-201)||(130103-130144)
[»] scaffold0628 (2 HSPs)
scaffold0628 (1-201)||(2686-2889)
scaffold0628 (226-360)||(2474-2608)
[»] scaffold0037 (2 HSPs)
scaffold0037 (1-127)||(22626-22753)
scaffold0037 (321-358)||(80005-80042)
[»] scaffold1765 (1 HSPs)
scaffold1765 (1-199)||(1120-1319)
[»] scaffold0125 (2 HSPs)
scaffold0125 (1-127)||(45748-45875)
scaffold0125 (198-364)||(45456-45624)
[»] scaffold0001 (4 HSPs)
scaffold0001 (1-127)||(160722-160848)
scaffold0001 (198-364)||(160972-161139)
scaffold0001 (326-360)||(446965-446999)
scaffold0001 (326-360)||(497896-497930)
[»] scaffold0021 (8 HSPs)
scaffold0021 (44-198)||(136252-136407)
scaffold0021 (44-198)||(144960-145115)
scaffold0021 (296-364)||(62947-63015)
scaffold0021 (321-360)||(124993-125032)
scaffold0021 (278-357)||(135965-136044)
scaffold0021 (278-357)||(144673-144752)
scaffold0021 (226-266)||(136132-136172)
scaffold0021 (226-266)||(144840-144880)
[»] scaffold0184 (1 HSPs)
scaffold0184 (1-127)||(1028-1152)
[»] scaffold0116 (2 HSPs)
scaffold0116 (224-364)||(43451-43592)
scaffold0116 (224-364)||(47371-47512)
[»] scaffold0261 (2 HSPs)
scaffold0261 (1-142)||(15699-15838)
scaffold0261 (321-360)||(16069-16108)
[»] scaffold0218 (4 HSPs)
scaffold0218 (1-199)||(7960-8157)
scaffold0218 (10-127)||(29239-29354)
scaffold0218 (321-360)||(28951-28990)
scaffold0218 (201-266)||(7841-7906)
[»] scaffold0046 (2 HSPs)
scaffold0046 (1-142)||(2035-2174)
scaffold0046 (1-142)||(11330-11469)
[»] scaffold0507 (2 HSPs)
scaffold0507 (203-364)||(7724-7886)
scaffold0507 (1-123)||(8018-8144)
[»] scaffold0150 (2 HSPs)
scaffold0150 (1-114)||(32136-32249)
scaffold0150 (226-364)||(32398-32537)
[»] scaffold0420 (1 HSPs)
scaffold0420 (1-199)||(6166-6367)
[»] scaffold0040 (2 HSPs)
scaffold0040 (1-198)||(103523-103714)
scaffold0040 (278-357)||(103257-103336)
[»] scaffold0357 (5 HSPs)
scaffold0357 (1-86)||(16098-16183)
scaffold0357 (1-82)||(13166-13247)
scaffold0357 (198-264)||(15866-15932)
scaffold0357 (285-355)||(13582-13652)
scaffold0357 (198-262)||(13418-13482)
[»] scaffold0165 (3 HSPs)
scaffold0165 (1-86)||(27747-27832)
scaffold0165 (326-360)||(27313-27347)
scaffold0165 (226-265)||(27485-27524)
[»] scaffold0175 (3 HSPs)
scaffold0175 (1-142)||(34161-34300)
scaffold0175 (321-360)||(34531-34570)
scaffold0175 (321-360)||(13503-13542)
[»] scaffold0100 (2 HSPs)
scaffold0100 (1-69)||(23898-23966)
scaffold0100 (296-360)||(20498-20562)
[»] scaffold0075 (4 HSPs)
scaffold0075 (1-123)||(53508-53632)
scaffold0075 (288-360)||(53142-53214)
scaffold0075 (226-265)||(53314-53353)
scaffold0075 (321-359)||(7966-8004)
[»] scaffold0022 (5 HSPs)
scaffold0022 (44-199)||(128853-129009)
scaffold0022 (44-196)||(78405-78556)
scaffold0022 (288-360)||(80716-80788)
scaffold0022 (289-360)||(128565-128636)
scaffold0022 (224-266)||(128735-128777)
[»] scaffold2014 (1 HSPs)
scaffold2014 (1-89)||(1070-1158)
[»] scaffold0475 (2 HSPs)
scaffold0475 (203-360)||(9368-9526)
scaffold0475 (21-78)||(9136-9193)
[»] scaffold0413 (2 HSPs)
scaffold0413 (1-197)||(12606-12803)
scaffold0413 (297-360)||(15286-15349)
[»] scaffold0012 (2 HSPs)
scaffold0012 (285-360)||(227867-227942)
scaffold0012 (31-123)||(225475-225568)
[»] scaffold0139 (1 HSPs)
scaffold0139 (1-199)||(38354-38555)
[»] scaffold1351 (1 HSPs)
scaffold1351 (44-199)||(87-243)
[»] scaffold0074 (1 HSPs)
scaffold0074 (1-89)||(38697-38785)
[»] scaffold0006 (2 HSPs)
scaffold0006 (44-123)||(97088-97168)
scaffold0006 (44-123)||(106366-106446)
[»] scaffold0123 (3 HSPs)
scaffold0123 (1-123)||(25144-25268)
scaffold0123 (44-123)||(619-698)
scaffold0123 (288-360)||(25560-25632)
[»] scaffold0839 (1 HSPs)
scaffold0839 (198-360)||(1748-1910)
[»] scaffold0320 (1 HSPs)
scaffold0320 (291-360)||(12376-12445)
[»] scaffold0161 (2 HSPs)
scaffold0161 (32-142)||(2386-2494)
scaffold0161 (321-360)||(2116-2155)
[»] scaffold0461 (1 HSPs)
scaffold0461 (1-123)||(11502-11626)
[»] scaffold0211 (1 HSPs)
scaffold0211 (226-360)||(28480-28615)
[»] scaffold0141 (1 HSPs)
scaffold0141 (1-89)||(39515-39602)
[»] scaffold0124 (3 HSPs)
scaffold0124 (1-123)||(38215-38339)
scaffold0124 (321-358)||(24324-24361)
scaffold0124 (225-265)||(24417-24457)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-89)||(75210-75297)
[»] scaffold0247 (2 HSPs)
scaffold0247 (1-123)||(17986-18110)
scaffold0247 (321-355)||(6504-6538)
[»] scaffold0540 (2 HSPs)
scaffold0540 (1-89)||(3146-3233)
scaffold0540 (299-360)||(684-745)
[»] scaffold0627 (1 HSPs)
scaffold0627 (321-364)||(315-358)
[»] scaffold0647 (1 HSPs)
scaffold0647 (318-360)||(5792-5834)
[»] scaffold0395 (1 HSPs)
scaffold0395 (318-360)||(633-675)
[»] scaffold1137 (2 HSPs)
scaffold1137 (303-364)||(1968-2029)
scaffold1137 (75-117)||(2261-2303)
[»] scaffold0737 (1 HSPs)
scaffold0737 (44-85)||(1795-1836)
[»] scaffold0358 (2 HSPs)
scaffold0358 (295-360)||(310-375)
scaffold0358 (295-360)||(5086-5151)
[»] scaffold0145 (1 HSPs)
scaffold0145 (296-360)||(39145-39209)
[»] scaffold0142 (1 HSPs)
scaffold0142 (226-360)||(17095-17230)
[»] scaffold0080 (3 HSPs)
scaffold0080 (44-199)||(19768-19923)
scaffold0080 (226-267)||(40227-40268)
scaffold0080 (324-360)||(40325-40361)
[»] scaffold0076 (1 HSPs)
scaffold0076 (288-360)||(24191-24263)
[»] scaffold0056 (3 HSPs)
scaffold0056 (296-360)||(16886-16950)
scaffold0056 (198-255)||(79106-79162)
scaffold0056 (324-360)||(79033-79069)
[»] scaffold0026 (4 HSPs)
scaffold0026 (316-360)||(40262-40306)
scaffold0026 (1-89)||(25934-26021)
scaffold0026 (1-89)||(39896-39983)
scaffold0026 (296-360)||(39602-39666)
[»] scaffold0005 (2 HSPs)
scaffold0005 (44-123)||(267743-267822)
scaffold0005 (288-355)||(268106-268173)
[»] scaffold1842 (1 HSPs)
scaffold1842 (321-360)||(731-770)
[»] scaffold1419 (1 HSPs)
scaffold1419 (223-262)||(335-374)
[»] scaffold0876 (1 HSPs)
scaffold0876 (321-360)||(2756-2795)
[»] scaffold0456 (1 HSPs)
scaffold0456 (321-360)||(10108-10147)
[»] scaffold0389 (1 HSPs)
scaffold0389 (321-360)||(13279-13318)
[»] scaffold0352 (1 HSPs)
scaffold0352 (321-360)||(17679-17718)
[»] scaffold0351 (1 HSPs)
scaffold0351 (321-360)||(16679-16718)
[»] scaffold0305 (1 HSPs)
scaffold0305 (321-360)||(20814-20853)
[»] scaffold0266 (1 HSPs)
scaffold0266 (321-360)||(18629-18668)
[»] scaffold0235 (2 HSPs)
scaffold0235 (321-360)||(11195-11234)
scaffold0235 (326-360)||(14055-14089)
[»] scaffold0217 (2 HSPs)
scaffold0217 (321-360)||(16270-16309)
scaffold0217 (226-267)||(16365-16406)
[»] scaffold0122 (3 HSPs)
scaffold0122 (321-360)||(25736-25775)
scaffold0122 (1-89)||(44702-44790)
scaffold0122 (321-357)||(33168-33204)
[»] scaffold0121 (1 HSPs)
scaffold0121 (321-360)||(8203-8242)
[»] scaffold0120 (3 HSPs)
scaffold0120 (321-360)||(16498-16537)
scaffold0120 (226-360)||(32630-32765)
scaffold0120 (226-360)||(46240-46375)
[»] scaffold0016 (3 HSPs)
scaffold0016 (321-360)||(2262-2301)
scaffold0016 (327-360)||(119222-119255)
scaffold0016 (225-265)||(207285-207325)
[»] scaffold0011 (2 HSPs)
scaffold0011 (321-360)||(52323-52362)
scaffold0011 (321-360)||(167661-167700)
[»] scaffold0718 (1 HSPs)
scaffold0718 (321-359)||(4814-4852)
[»] scaffold0427 (1 HSPs)
scaffold0427 (322-360)||(13896-13934)
[»] scaffold0231 (1 HSPs)
scaffold0231 (321-359)||(23293-23331)
[»] scaffold0031 (1 HSPs)
scaffold0031 (229-360)||(20097-20228)
[»] scaffold0042 (1 HSPs)
scaffold0042 (323-360)||(23973-24010)
[»] scaffold0228 (6 HSPs)
scaffold0228 (296-360)||(4894-4958)
scaffold0228 (296-360)||(12476-12540)
scaffold0228 (296-360)||(22428-22492)
scaffold0228 (45-89)||(4589-4633)
scaffold0228 (45-89)||(12171-12215)
scaffold0228 (45-89)||(22123-22167)
[»] scaffold0598 (1 HSPs)
scaffold0598 (321-360)||(734-773)
[»] scaffold0347 (2 HSPs)
scaffold0347 (198-265)||(316-383)
scaffold0347 (321-358)||(439-476)
[»] scaffold0292 (2 HSPs)
scaffold0292 (321-360)||(753-792)
scaffold0292 (321-360)||(3881-3920)
[»] scaffold0193 (1 HSPs)
scaffold0193 (321-360)||(13611-13650)
[»] scaffold0192 (1 HSPs)
scaffold0192 (198-265)||(10198-10265)
[»] scaffold0151 (1 HSPs)
scaffold0151 (321-360)||(10555-10594)
[»] scaffold0130 (3 HSPs)
scaffold0130 (321-360)||(28947-28986)
scaffold0130 (327-360)||(1374-1407)
scaffold0130 (45-89)||(27912-27956)
[»] scaffold0113 (1 HSPs)
scaffold0113 (321-360)||(32464-32503)
[»] scaffold0088 (1 HSPs)
scaffold0088 (321-364)||(21301-21344)
[»] scaffold1403 (3 HSPs)
scaffold1403 (223-261)||(862-900)
scaffold1403 (44-81)||(633-669)
scaffold1403 (147-199)||(735-787)
[»] scaffold0586 (1 HSPs)
scaffold0586 (318-364)||(2261-2307)
[»] scaffold0221 (1 HSPs)
scaffold0221 (321-359)||(12481-12519)
[»] scaffold0109 (1 HSPs)
scaffold0109 (326-360)||(35541-35575)
[»] scaffold0077 (1 HSPs)
scaffold0077 (326-360)||(55279-55313)
[»] scaffold0032 (1 HSPs)
scaffold0032 (321-359)||(51979-52017)
[»] scaffold0004 (1 HSPs)
scaffold0004 (322-360)||(332804-332842)
[»] scaffold0908 (1 HSPs)
scaffold0908 (1-85)||(3185-3269)
[»] scaffold0503 (1 HSPs)
scaffold0503 (226-267)||(12244-12285)
[»] scaffold0403 (1 HSPs)
scaffold0403 (2-82)||(4888-4968)
[»] scaffold0601 (1 HSPs)
scaffold0601 (288-360)||(7108-7180)
[»] scaffold0117 (1 HSPs)
scaffold0117 (48-123)||(39337-39413)


Alignment Details
Target: chr8 (Bit Score: 153; Significance: 5e-81; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 38855334 - 38855134
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 100  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38855334 cttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 38855235  T
Q  101 atataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttcta 200  Q
    ||||||||||||||||||||||||||| ||||| |||||||||| |||| |||||| | ||||||||||||||||||||| ||||| ||||||||| |||    
T  38855234 atataatgtatatacaattatataacattagcaacaacattagattatacaattcaggcttactgaaacaacaacagcaagataaacaacttagttccta 38855135  T
Q  201 a 201  Q
    |    
T  38855134 a 38855134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 6520406 - 6520606
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 100  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||  ||| |||||||||||||    
T  6520406 cttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatcataaacatcaacataattc 6520505  T
Q  101 atataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttcta 200  Q
    || |||||||||||||||||||||||| ||||| |||||||||| |||| |||||| | ||||||||||||||||||||| |||||||||||||||||||    
T  6520506 atgtaatgtatatacaattatataacattagcaacaacattagattatacaattcaggcttactgaaacaacaacagcaagataaataacttagtttcta 6520605  T
Q  201 a 201  Q
    |    
T  6520606 a 6520606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 198 - 364
Target Start/End: Complemental strand, 38855084 - 38854918
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcgttcttaaactatt 297  Q
    |||| |||||||||||||||||||  |  |||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||    
T  38855084 ctaagcaaggcattctgtaactgggcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaattcgttcttaaactatt 38854985  T
Q  298 ccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    |||| || ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38854984 ccaggttaaatcttaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacat 38854918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 3 - 185
Target Start/End: Original strand, 21673744 - 21673927
Alignment:
Q  3 tagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattcat 102  Q
    |||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||    
T  21673744 tagttaaataacaaacaacaacataggcattatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaatataatttat 21673843  T
Q  103 ataatgtatatacaattatataacagtagcagcaacattagaatata-taattcaagtttactgaaacaacaacagcaaaataa 185  Q
     ||||||||||||||||||||| || || || ||||||||||  ||| ||||||||| ||||||||||||||||| ||| ||||    
T  21673844 ttaatgtatatacaattatataccattaacaacaacattagatcatattaattcaagcttactgaaacaacaacaacaagataa 21673927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 23760927 - 23760751
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 100  Q
    ||||||||||||||||||| |||| |||| |||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  23760927 cttagttaaataacaaacagcaacataggcagtatgtaaatcatcatgatataacaatattgaattcaaatcaacaacatctcaaatatcaacataattc 23760828  T
Q  101 atataatgtatatacaattatataacagtagcagcaacattagaatata-taattcaagtttactgaaacaacaaca 176  Q
    |||||||||||||||||||||||| || || || ||||||||||  ||| | ||||| | |||||||||||||||||    
T  23760827 atataatgtatatacaattatataccattaacaacaacattagatcatatttattcaggcttactgaaacaacaaca 23760751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 21285639 - 21285834
Alignment:
Q  5 gttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataattcata 103  Q
    |||||||||||||||||||| |||| |||||||||| || ||||||||||||||||| |||||||||||||||||||||||| ||| |||||| |||||     
T  21285639 gttaaataacaaacaacaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaaatcaacaacatctcaaacatcaaacatagttcatg 21285738  T
Q  104 taatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    ||||||||||||||||||||| || || || ||| |||||| ||||||||||| | ||||||||||||||||| ||| |||||  |||||||||||    
T  21285739 taatgtatatacaattatatatcattaacaacaatattagattatataattcaggcttactgaaacaacaacaacaagataaagcacttagtttct 21285834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 199 - 364
Target Start/End: Original strand, 39834120 - 39834286
Alignment:
Q  199 taaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaa-attcgttcttaaactatt 297  Q
    ||||||||| ||||||||| ||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||| | || |||| |||||||||||||    
T  39834120 taaacaaggtattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcacaaagattcattcttaaactatt 39834219  T
Q  298 ccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    |||| |||||||| ||| | |||||||||||||||||||| ||||| ||| ||||||||||||||||    
T  39834220 ccaggttcaatctcaatctacaatctttcctaatcattatcatacaagtttaggcactcaaaaacat 39834286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 198 - 362
Target Start/End: Original strand, 21673992 - 21674157
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaa-attcgttcttaaactat 296  Q
    |||||||||||||||||||||  || |  |||||||||||||||||||||||||||| ||||||||||||||||||| | || |||| |||| |||   |    
T  21673992 ctaaacaaggcattctgtaacaagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcacaaatattcattctaaaatctt 21674091  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaac 362  Q
    ||||| |||||||| | | |||||||||||||||||||||||| ||||||||||||||||||||||    
T  21674092 tccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaac 21674157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 201 - 364
Target Start/End: Complemental strand, 23760671 - 23760507
Alignment:
Q  201 aacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaa-ttcgttcttaaactattcc 299  Q
    ||||||||||| ||||||| || |  |||||||||||||||||||||||||| | || |||||||||  ||||| |  || |||||||||||||||||||    
T  23760671 aacaaggcattttgtaactagtcaattcgcgaggcgagggcctctactcgccttggcaagttcaggtataactcccacaagttcgttcttaaactattcc 23760572  T
Q  300 agattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    || |||||||| ||| |||||| ||||||||||||||||| ||||||||||| ||||||||||||    
T  23760571 aggttcaatctcaatatccaatatttcctaatcattattagacatgttcaggaactcaaaaacat 23760507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 26355781 - 26355656
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 100  Q
    |||||||||| ||||||||||||| |||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||   ||||||||| | |    
T  26355781 cttagttaaacaacaaacaacaacataggcagtatgcaaatcatcacgatataacaatatcgaatgc-aatcaacaacatctcagccatcaacatattcc 26355683  T
Q  101 atataatgtatatacaattatataaca 127  Q
    || ||||||||||||||||||||||||    
T  26355682 atttaatgtatatacaattatataaca 26355656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 201 - 364
Target Start/End: Original strand, 6520658 - 6520822
Alignment:
Q  201 aacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcg-ttcttaaactattcc 299  Q
    ||||| ||||||||||| |||  || | |||||||||||||||||||||||||| |||| |||||||  ||||||| ||| ||  ||||||||||||| |    
T  6520658 aacaaagcattctgtaattgggcagtttgcgaggcgagggcctctactcgccatggcgaattcaggtctaactctcaaaaatccattcttaaactatttc 6520757  T
Q  300 agattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    || |||| ||||||| |||||||||||||||| ||||||| |||||||||| |||||||||||||    
T  6520758 aggttcagtcttaatctccaatctttcctaattattattagacatgttcagacactcaaaaacat 6520822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 199 - 364
Target Start/End: Complemental strand, 26355531 - 26355365
Alignment:
Q  199 taaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactatt 297  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| || ||||||||| ||| || |  |||||| |||| ||    ||    
T  26355531 taaacaaggcattctgtaactagttagctcgtgaggcgagagcctctactcgccatggcaagttcaggtacaattcacaaaaattcattctaaagtcttt 26355432  T
Q  298 ccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    |||| |||||||| ||| | |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  26355431 ccaggttcaatctcaatcttcaatctctcctaatcattattagacatgttcaggcactcaaaaacat 26355365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 226 - 357
Target Start/End: Complemental strand, 19801233 - 19801101
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaa-ttcgttcttaaactattccagattcaatcttaatttccaatctt 324  Q
    |||||||||||||| |||||||||||||| ||||||||||||  ||||| |  || ||||||||||||||||||||| |||||||||| | || | ||||    
T  19801233 ctcgcgaggcgaggacctctactcgccatggcgagttcaggtataactcccacaagttcgttcttaaactattccaggttcaatcttattctctagtctt 19801134  T
Q  325 tcctaatcattattatacatgttcaggcactca 357  Q
    ||||||||||||||| |||||||||||||||||    
T  19801133 tcctaatcattattagacatgttcaggcactca 19801101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 5866357 - 5866218
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    ||||||||||||||||||| |||| |||| |||||||||| ||||||||||||| ||||||||||| ||||||||||   ||||| |||| ||| ||| |    
T  5866357 cttagttaaataacaaacagcaacataggcagtatgcaaaccatcatgatataataatatcgaatgtaaatcaacaa---ctcaattatcaaacttaagt 5866261  T
Q  100 catataatgtatatacaattatataacagtagcagcaacatta 142  Q
    ||| |||||||||||||||||||||||| ||  ||||||||||    
T  5866260 catgtaatgtatatacaattatataacattataagcaacatta 5866218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 21491033 - 21491172
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    ||||||||||||||||||| |||| |||| |||||||||| ||||||||||||| ||||| ||||| ||||||||||   ||||| |||| ||| ||| |    
T  21491033 cttagttaaataacaaacagcaacataggcagtatgcaaaccatcatgatataataatattgaatgtaaatcaacaa---ctcaattatcaaacttaagt 21491129  T
Q  100 catataatgtatatacaattatataacagtagcagcaacatta 142  Q
    ||| |||||||||||||||||||||||| ||  ||||||||||    
T  21491130 catgtaatgtatatacaattatataacattataagcaacatta 21491172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 17140954 - 17141093
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    ||||||||||||||||||| |||| |||| |||||||||  |||||||| |||| ||||||||||| |||||| |||   ||||| |||| ||| ||| |    
T  17140954 cttagttaaataacaaacagcaacataggcagtatgcaatccatcatgacataataatatcgaatgtaaatcatcaa---ctcaattatcaaacttaagt 17141050  T
Q  100 catataatgtatatacaattatataacagtagcagcaacatta 142  Q
    ||| |||||||||||||||||||||||| ||  ||||||||||    
T  17141051 catgtaatgtatatacaattatataacattataagcaacatta 17141093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 44 - 199
Target Start/End: Complemental strand, 17267032 - 17266876
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatataacagtagcagcaacatta 142  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||| | ||||||| | ||||| ||||||| |||||| ||| ||  | |||||| |    
T  17267032 tcatgatataacaatatcaaatgcaaatcaacaacatctcaaacatcatatataattcttgtaatgcatatacatttatatcacattattaacaacatca 17266933  T
Q  143 gaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
     |  |||||||||| | | |||||||||||||||| || ||||  ||||||||||||    
T  17266932 aatcatataattcaggctcactgaaacaacaacagtaagataagcaacttagtttct 17266876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 44 - 199
Target Start/End: Original strand, 37116430 - 37116586
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatataacagtagcagcaacatta 142  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||| | ||||||||| ||||| |||||||| ||||| ||| ||  | |||||| |    
T  37116430 tcatgatataacaatatcaaatgcaaatcaacaacatctcaaacatcatatataattcatgtaatgcatatacaaatatatcacattattaacaacatca 37116529  T
Q  143 gaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
     |  || ||| ||| | |||||||||||||||||| || ||||  ||||||||||||    
T  37116530 aatcatctaaatcaggcttactgaaacaacaacagtaagataagcaacttagtttct 37116586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 983489 - 983312
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatca--tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaa-cataa 97  Q
    |||||||||||||||| || |||| |||| ||||||||||  |  ||||||||||||||| || ||||||| ||||||||||| |||  ||||| |||||    
T  983489 cttagttaaataacaatcagcaacataggcagtatgcaaacaagttcatgatataacaatctcaaatgcaattcaacaacatcacaac-atcaaacataa 983391  T
Q  98 ttcatataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaaca 176  Q
    ||||| |||||||||||||  ||||||||| || || |||||||  |  ||||||||||   |||||||||||||||||    
T  983390 ttcatgtaatgtatatacagctatataacattatcaacaacattcaatcatataattcagacttactgaaacaacaaca 983312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 201 - 301
Target Start/End: Original strand, 21285888 - 21285989
Alignment:
Q  201 aacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactattcc 299  Q
    ||||| |||||||||||||||  | || |||||||||||||||||||||||||| ||||||||||||| ||||| |  |||||| |||||||||||||||    
T  21285888 aacaaagcattctgtaactgggcaacttgcgaggcgagggcctctactcgccatagcgagttcaggtgtaactcccaaaaattcattcttaaactattcc 21285987  T
Q  300 ag 301  Q
    ||    
T  21285988 ag 21285989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 17439590 - 17439465
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatca--tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataa 97  Q
    |||||||||  ||||||||||||| |||| ||||   ||| ||  |||||||||||||||||| |||||||||||||||||||||||| |||| | ||||    
T  17439590 cttagttaataaacaaacaacaacataggcagtacataaaacagttcatgatataacaatatcaaatgcaaatcaacaacatctcaaacatcatatataa 17439491  T
Q  98 ttcatataatgtatatacaattatat 123  Q
    ||||| ||||| |||||||| |||||    
T  17439490 ttcatgtaatgcatatacaaatatat 17439465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 21249453 - 21249562
Alignment:
Q  31 agtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataattcatataatgtatatacaattatataacagt 129  Q
    ||||||||| |||||||||||||| ||||||||||| ||||||||||   ||||| |||| ||| ||| |||| |||||||||||||||||||||||| |    
T  21249453 agtatgcaattcatcatgatataataatatcgaatgtaaatcaacaa---ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacatt 21249549  T
Q  130 agcagcaacatta 142  Q
    |  ||||||||||    
T  21249550 ataagcaacatta 21249562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 31 - 142
Target Start/End: Original strand, 21255291 - 21255400
Alignment:
Q  31 agtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataattcatataatgtatatacaattatataacagt 129  Q
    ||||||||| |||||||||||||| ||||||||||| ||||||||||   ||||| |||| ||| ||| |||| |||||||||||||||||||||||| |    
T  21255291 agtatgcaattcatcatgatataataatatcgaatgtaaatcaacaa---ctcaattatcaaacttaagtcatgtaatgtatatacaattatataacatt 21255387  T
Q  130 agcagcaacatta 142  Q
    |  ||||||||||    
T  21255388 ataagcaacatta 21255400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 17612193 - 17612069
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaat-atca-acataat 98  Q
    ||||||||| |||||| ||||||| |||| |||||||||| ||||||||||||| ||||||| | | || | ||||||||||||||| |||| | |||||    
T  17612193 cttagttaattaacaatcaacaacataggcagtatgcaaaacatcatgatataataatatcgcacgtaagtaaacaacatctcaaataatcacatataat 17612094  T
Q  99 tcatataatgtatatacaattatat 123  Q
    |||  ||||| ||||||||||||||    
T  17612093 tcaagtaatgcatatacaattatat 17612069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 44 - 197
Target Start/End: Original strand, 22364744 - 22364897
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatataacagtagcagcaacatta 142  Q
    |||||||||||||||||| || | ||||||||||||||||||| |||| | ||||||||| ||||| ||||||| |||||| ||  ||  | |||||| |    
T  22364744 tcatgatataacaatatcaaa-gaaaatcaacaacatctcaaacatcatatataattcatgtaatgcatatacatttatatcactttattaacaacatca 22364842  T
Q  143 gaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagttt 197  Q
     |  |||||||||| | |||||||||||||||||| || ||||  ||||||||||    
T  22364843 aatcatataattcaggcttactgaaacaacaacagtaagataagcaacttagttt 22364897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 13508168 - 13508044
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaac--ataat 98  Q
    ||||||||| |||||| || |||| |||| | |||||| | ||||||||||||| ||||||||| |||| | |||||||||||||||||  ||  |||||    
T  13508168 cttagttaattaacaatcagcaacataggcaatatgcacaacatcatgatataataatatcgaacgcaagtaaacaacatctcaaatattcacatataat 13508069  T
Q  99 tcatataatgtatatacaattatat 123  Q
    |||  ||||| ||||||||||||||    
T  13508068 tcaagtaatgcatatacaattatat 13508044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 20498600 - 20498724
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaata-tca-acataat 98  Q
    |||||||||  |||||||| |||| |||| |||||| |||  | ||||||||||||||||| ||||||| ||| |||||||||||| | ||| | |||||    
T  20498600 cttagttaataaacaaacagcaacataggcagtatgtaaaatagcatgatataacaatatcaaatgcaagtcatcaacatctcaaacattcatatataat 20498699  T
Q  99 tcatataatgtatatacaattatat 123  Q
    |||  ||||||||||||||||||||    
T  20498700 tcaagtaatgtatatacaattatat 20498724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 13597700 - 13597576
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaac--ataat 98  Q
    ||||||||| |||||| || |||| || | || ||||||| ||||||||||||| ||||||||| |||| | ||||||||| |||||||  ||  |||||    
T  13597700 cttagttaattaacaatcagcaacataagcagaatgcaaaacatcatgatataataatatcgaacgcaagtaaacaacatcccaaatattcacatataat 13597601  T
Q  99 tcatataatgtatatacaattatat 123  Q
    |||  ||||| ||||||||||||||    
T  13597600 tcaagtaatgcatatacaattatat 13597576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 44 - 176
Target Start/End: Original strand, 24353103 - 24353235
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataattcatataatgtatatacaattatataacagtagcagcaacatta 142  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||  | | ||||||| ||||| ||||||| |||||| | | ||  | |||||| |    
T  24353103 tcatgatataacaatatc-aatgcaaatcaacaacatctcaaacatcgtatacaattcatgtaatgcatatacatttatatcatattattaacaacatca 24353201  T
Q  143 gaatatataattcaagtttactgaaacaacaaca 176  Q
     |  |||||||||| | |||||||||||||||||    
T  24353202 aatcatataattcaggcttactgaaacaacaaca 24353235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 91
Target Start/End: Complemental strand, 40492891 - 40492844
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca 91  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||    
T  40492891 tcatgatataacaatatcaaatgcaaatcaacaacatctcaaacatca 40492844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 360
Target Start/End: Original strand, 41598472 - 41598634
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaa-attcgttcttaaactat 296  Q
    ||||||||| |||||||||||| | |  ||||||||||||| |||||| |||||||| ||||||||||||   | || | ||  ||| |||| |||   |    
T  41598472 ctaaacaag-cattctgtaactaggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctt 41598570  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||| |||||||| | | | || |||||| |||||||||||| ||||||||||||||||||||    
T  41598571 tccaggttcaatctcattctacattctttcataatcattattagacatgttcaggcactcaaaa 41598634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22626774 - 22626861
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    |||||||||||||||| || |||| |||| ||||| |||| || ||||| |||| |||||| ||| |||||||||||||||| ||||||    
T  22626774 cttagttaaataacaa-cagcaacataggcagtatacaaaacaacatgacataataatatcaaatacaaatcaacaacatcttaaatat 22626861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 5865987 - 5865948
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  5865987 tctttcctaatcattattagacatgttcaggcactcaaaa 5865948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 7373160 - 7373199
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  7373160 tctttcctaatcattattagacatgttcaggcactcaaaa 7373199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 17141324 - 17141363
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  17141324 tctttcctaatcattattagacatgttcaggcactcaaaa 17141363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 18878947 - 18878908
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  18878947 tctttcctaatcattattagacatgttcaggcactcaaaa 18878908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 21491403 - 21491442
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  21491403 tctttcctaatcattattagacatgttcaggcactcaaaa 21491442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 22627146 - 22627185
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  22627146 tctttcctaatcattattagacatgttcaggcactcaaaa 22627185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 23406792 - 23406831
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  23406792 tctttcctaatcattattagacatgttcaggcactcaaaa 23406831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 45130741 - 45130702
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  45130741 tctttcctaatcattattagacatgttcaggcactcaaaa 45130702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 360
Target Start/End: Complemental strand, 17085804 - 17085770
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||||||||||||||||||||||||    
T  17085804 cctaatcattattatacatgttcaggcactcaaaa 17085770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 364
Target Start/End: Complemental strand, 17266621 - 17266583
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  17266621 cctaatcattattatacatattcaggcactcaaaaacat 17266583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 360
Target Start/End: Original strand, 20499076 - 20499110
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||||||||||||||||||||||||    
T  20499076 cctaatcattattatacatgttcaggcactcaaaa 20499110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 323 - 360
Target Start/End: Complemental strand, 18818118 - 18818081
Alignment:
Q  323 tttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  18818118 tttcctaatcattattagacatgttcaggcactcaaaa 18818081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 6759668 - 6759707
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  6759668 tctttcctaatcattattagacatgttcaagcactcaaaa 6759707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 16092051 - 16092012
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  16092051 tctttcctaatcattattagacatgttcatgcactcaaaa 16092012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 20536619 - 20536658
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||| | ||||||||||||||||||||    
T  20536619 tctttcctaatcattatcagacatgttcaggcactcaaaa 20536658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 23648964 - 23649003
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| |||||||||| |||||||||    
T  23648964 tctttcctaatcattattagacatgttcagtcactcaaaa 23649003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 360
Target Start/End: Original strand, 24353479 - 24353550
Alignment:
Q  289 taaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||| | |||| |||||||| ||| |  || ||| ||||||||||||||||||| |||||||||||||||    
T  24353479 taaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatattcaggcactcaaaa 24353550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 28648754 - 28648715
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||| |||||||||||| ||||||||||||||||||||    
T  28648754 tctttcataatcattattagacatgttcaggcactcaaaa 28648715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 364
Target Start/End: Original strand, 16799982 - 16800020
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  16799982 cctaatcattcttatacatattcaggcactcaaaaacat 16800020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 21389533 - 21389499
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtat 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  21389533 cttagttaaataacaaacaacaacataggtagtat 21389499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 21414940 - 21414894
Alignment:
Q  318 caatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||||||||||||||| | | ||| |||||||||||||||||||    
T  21414940 caatctttcctaatcattagtgtgcatcttcaggcactcaaaaacat 21414894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 21778859 - 21778825
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtat 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  21778859 cttagttaaataacaaacaacaacataggtagtat 21778825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 22875132 - 22875190
Alignment:
Q  31 agtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    ||||| |||| || ||||| |||| |||||| ||||||| |||||||||||||||||||    
T  22875132 agtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaaatat 22875190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 267
Target Start/End: Original strand, 23406670 - 23406736
Alignment:
Q  201 aacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggt 267  Q
    ||||||||| |||||  |||| |  ||||||||||||| ||||||||||||| | ||||||||||||    
T  23406670 aacaaggcactctgtttctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggt 23406736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 322 - 360
Target Start/End: Original strand, 31971656 - 31971694
Alignment:
Q  322 ctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||||||| |||||||||||||| |||||    
T  31971656 ctttcctaatcattattagacatgttcaggcacacaaaa 31971694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 360
Target Start/End: Original strand, 37116840 - 37116874
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| |||||||||||||||    
T  37116840 cctaatcattattatacatattcaggcactcaaaa 37116874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 360
Target Start/End: Complemental strand, 13507713 - 13507680
Alignment:
Q  327 ctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||||||| |||||||||||||||    
T  13507713 ctaatcattattatacatattcaggcactcaaaa 13507680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 360
Target Start/End: Complemental strand, 13597245 - 13597212
Alignment:
Q  327 ctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||||||| |||||||||||||||    
T  13597245 ctaatcattattatacatattcaggcactcaaaa 13597212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 16092425 - 16092337
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaat-catcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    |||||||||||||||| || ||||  ||| ||||| ||||  || ||||| |||| |||||| ||||||| |||||||||||||||||||    
T  16092425 cttagttaaataacaa-cagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatat 16092337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 20536522 - 20536563
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggt 267  Q
    ||||||||||||| ||||||||||||| | ||||||||||||    
T  20536522 ctcgcgaggcgagagcctctactcgccgtggcgagttcaggt 20536563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 127
Target Start/End: Original strand, 21383887 - 21383975
Alignment:
Q  39 aatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataattcatataatgtatatacaattatataaca 127  Q
    ||||||||| ||||||||||  | ||||||  ||| |||||||||||||||| ||||||||||||  ||| |||||  ||||||||||||    
T  21383887 aatcatcat-atataacaattacaaatgcacgtcatcaacatctcaaatatcaaacataattcatgcaatatatatctaattatataaca 21383975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 21918807 - 21918766
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggt 267  Q
    ||||||||||||| |||||| |||||||| ||||||||||||    
T  21918807 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggt 21918766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 265
Target Start/End: Complemental strand, 22419223 - 22419182
Alignment:
Q  224 agctcgcgaggcgagggcctctactcgccattgcgagttcag 265  Q
    ||||||||||| |||||||||||||||| || ||||||||||    
T  22419223 agctcgcgaggtgagggcctctactcgctatggcgagttcag 22419182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 25484359 - 25484279
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaac--ataattcatataatgtatatacaattatat 123  Q
    ||||| |||| |||||| |||||||||||||||| |||||| |||  ||  ||||||||  ||||| ||||||||||||||    
T  25484359 catgacataataatatcaaatgcaaatcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatat 25484279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 266
Target Start/End: Original strand, 37116663 - 37116704
Alignment:
Q  225 gctcgcgaggcgagggcctctactcgccattgcgagttcagg 266  Q
    |||||||||||||| |||||||||||| || |||||||||||    
T  37116663 gctcgcgaggcgagagcctctactcgctatggcgagttcagg 37116704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 4483358 - 4483445
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  4483358 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 4483445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 22001831 - 22001918
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  22001831 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 22001918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 146; Significance: 8e-77; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 22921952 - 22921751
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22921952 cttagttaaataacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacaaaattc 22921853  T
Q  101 atataatgtatatacaattatataacagtagcagcaacattagaatata-taattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    ||||||||||||||||||||||||||| || || ||||||||||  ||| ||||||| | ||||||||||||||||||||| ||||| ||||||||||||    
T  22921852 atataatgtatatacaattatataacattaacaacaacattagatcatattaattcaggcttactgaaacaacaacagcaagataaacaacttagtttct 22921753  T
Q  200 aa 201  Q
    ||    
T  22921752 aa 22921751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 198 - 361
Target Start/End: Original strand, 20637137 - 20637301
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactat 296  Q
    ||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |  |||||||||||||||||||    
T  20637137 ctaaacaagacattctgtaactgattagctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcacaaaaattcgttcttaaactat 20637236  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaa 361  Q
    ||||| |||||||||||| ||||||||||||||||||| |||||||| ||  |||||||||||||    
T  20637237 tccaggttcaatcttaatctccaatctttcctaatcatcattatacaagtctaggcactcaaaaa 20637301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 198 - 364
Target Start/End: Complemental strand, 35981520 - 35981353
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactat 296  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||| |||| ||||||||||||||||||| | ||||||||||||||||||||    
T  35981520 ctaaacaaggcattctgtaactagttagctcgcgaggcgagagcctctactcaccatggcgagttcaggtgcaactcacataaattcgttcttaaactat 35981421  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
     |||| |||||||| ||| | ||||||||||||||||| || ||||| ||||||||||||||||||||    
T  35981420 cccaggttcaatctcaatctacaatctttcctaatcatcatcatacaagttcaggcactcaaaaacat 35981353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 200 - 364
Target Start/End: Complemental strand, 22921699 - 22921534
Alignment:
Q  200 aaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaa-ttcgttcttaaactattc 298  Q
    |||||||||||||||||||| |  || |||||||||||| ||||||||||||||| ||||||||| ||  ||||||| ||| ||||||||||||||||||    
T  22921699 aaacaaggcattctgtaactaggcagttcgcgaggcgagagcctctactcgccatggcgagttcaagtctaactctcaaaaattcgttcttaaactattc 22921600  T
Q  299 cagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    | | |||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22921599 ctggttcaatctcaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacat 22921534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 33681045 - 33681172
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||| |||||||||    
T  33681045 cttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcgtcaacatctcaaatatcaaacataatt 33681144  T
Q  100 catataatgtatatacaattatataaca 127  Q
    ||| ||||||||||||||||||||||||    
T  33681145 catgtaatgtatatacaattatataaca 33681172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 198 - 364
Target Start/End: Complemental strand, 28194282 - 28194115
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaa-attcgttcttaaactat 296  Q
    ||||||||| |||| ||||| ||| |||||||||||||||| ||||||||| ||||| ||||||||||||||||||| | || |||| ||||||||||||    
T  28194282 ctaaacaagacattttgtaaatgggtagctcgcgaggcgagagcctctacttgccatggcgagttcaggtgcaactcacaaagattcattcttaaactat 28194183  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    | ||| |||||||| ||| | ||||||||||||||||| || ||||| ||||||||||||||||||||    
T  28194182 ttcaggttcaatctcaatctacaatctttcctaatcatcatcatacaagttcaggcactcaaaaacat 28194115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 22237665 - 22237791
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    ||||||||||||||||||| | || |||| | ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||    
T  22237665 cttagttaaataacaaacagcgacataggcattatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatctcaaatatcaaacataatt 22237764  T
Q  100 catataatgtatatacaattatataac 126  Q
    ||| |||||||||||||||||||||||    
T  22237765 catgtaatgtatatacaattatataac 22237791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 21754083 - 21754198
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 100  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||| |    
T  21754083 cttagttaaataacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcaaatgc-aatcaacaacatctcaattatcaacataatcc 21754181  T
Q  101 atataatgtatatacaa 117  Q
    || ||||||||||||||    
T  21754182 atttaatgtatatacaa 21754198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 198 - 361
Target Start/End: Original strand, 22237917 - 22238080
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcgttcttaaactatt 297  Q
    |||||||||||||||||||||| || |  |||||||||||||||||||||||||||| ||||||||| ||||||||| | |||||| |||  |||   ||    
T  22237917 ctaaacaaggcattctgtaactagtcaattcgcgaggcgagggcctctactcgccatggcgagttcaagtgcaactcacaaaattcattccaaaatcttt 22238016  T
Q  298 ccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaa 361  Q
    |||| || ||||| | | ||||||||||||||| |||||||| |||||||||||||||||||||    
T  22238017 ccaggtttaatctcattctccaatctttcctaaccattattagacatgttcaggcactcaaaaa 22238080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 70 - 201
Target Start/End: Complemental strand, 35981701 - 35981570
Alignment:
Q  70 atcaacaacatctcaaatatcaacataattcatataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaac 169  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || || ||||||||||||||| ||| || | |||||| ||     
T  35981701 atcaacaacatctcaaatatcaacataattcatataatgtatatgcaattatataacattatcatcaacattagaatatacaatccaggcttactggaat 35981602  T
Q  170 aacaacagcaaaataaataacttagtttctaa 201  Q
     |||||| ||| ||||||||||||||||||||    
T  35981601 gacaacatcaagataaataacttagtttctaa 35981570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 20248317 - 20248438
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    |||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||   || ||||||| ||||||| |    
T  20248317 cttagttaaaaaacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaa---cttaaatatcaaacataagt 20248413  T
Q  100 catataatgtatatacaattatata 124  Q
    ||| |||||||||||||||||||||    
T  20248414 catgtaatgtatatacaattatata 20248438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 70 - 201
Target Start/End: Original strand, 49261447 - 49261578
Alignment:
Q  70 atcaacaacatctcaaatatcaacataattcatataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaac 169  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || || ||||||||||||||| |||||  | |||||| ||     
T  49261447 atcaacaacatctcaaatatcaacataatttatataatgtatatacaattatataacattatcatcaacattagaatatacaattccggcttactggaag 49261546  T
Q  170 aacaacagcaaaataaataacttagtttctaa 201  Q
     |||||| |||  |||||||||||||||||||    
T  49261547 gacaacatcaaggtaaataacttagtttctaa 49261578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 201 - 364
Target Start/End: Complemental strand, 52927812 - 52927648
Alignment:
Q  201 aacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactct-ctaaattcgttcttaaactattcc 299  Q
    |||||||||||||||||||||| |  |||||||||||||||||||||||||||| ||||||||||||  |||| |   |||||| |||  |||   ||||    
T  52927812 aacaaggcattctgtaactggtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtctaactttaaaaaattcattccaaaatctttcc 52927713  T
Q  300 agattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    || |||||||| | | ||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  52927712 aggttcaatctcattctccaatctttcataatcattattagacatgttcaggcactcaaaaacat 52927648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 203 - 364
Target Start/End: Original strand, 33681301 - 33681463
Alignment:
Q  203 caaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactattccag 301  Q
    ||||||| ||||||||||| ||  |||||||||||| |||||| |||||||| ||||||||||||||||||| |  |||||| |||| |||   ||||||    
T  33681301 caaggcactctgtaactgggtaattcgcgaggcgagagcctctgctcgccatggcgagttcaggtgcaactcacaaaaattcattctaaaatctttccag 33681400  T
Q  302 attcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
     |||||||| | | |||||||||||||||||||||||| |||| |||||| ||||||||||||    
T  33681401 gttcaatctcattctccaatctttcctaatcattattagacatattcaggaactcaaaaacat 33681463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 14295634 - 14295510
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataatt 99  Q
    ||||||||||||||||||| |||| ||||||||||||||| ||||||||||||| ||||||||||| ||||||||||   ||||| ||||| || ||| |    
T  14295634 cttagttaaataacaaacagcaacataggtagtatgcaaaccatcatgatataataatatcgaatgtaaatcaacaa---ctcaattatcagacttaagt 14295538  T
Q  100 catataatgtatatacaattatataaca 127  Q
    ||| ||||||||||||||||||||||||    
T  14295537 catgtaatgtatatacaattatataaca 14295510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 198 - 364
Target Start/End: Original strand, 20248564 - 20248731
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactat 296  Q
    ||||| |||||||||||||||| |||||||||||||||||  ||||||||||||||| |||||||||||| ||  || |  |||||| ||| |||| | |    
T  20248564 ctaaataaggcattctgtaactagttagctcgcgaggcgatagcctctactcgccatggcgagttcaggttcagttcacaaaaattcattc-taaagtct 20248662  T
Q  297 -tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
     ||||| |||||||| | | ||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  20248663 ctccaggttcaatctcattctccgatctttcctaatcattattagacatgttcaggcactcaaaaacat 20248731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 71 - 201
Target Start/End: Original strand, 20636957 - 20637087
Alignment:
Q  71 tcaacaacatctcaaatatcaacataattcatataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaaca 170  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||| || || |||||||| || ||| |||||| | |||||| ||      
T  20636957 tcaacaacatcccaaatacaaacataattcatataatgtatatacaattatataacattatcatcaacattaaaaaatacaattcaggcttactggaatg 20637056  T
Q  171 acaacagcaaaataaataacttagtttctaa 201  Q
    |||||| |||  |||||||||||||||||||    
T  20637057 acaacatcaaggtaaataacttagtttctaa 20637087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 20918642 - 20918779
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    ||||||||||||||||||  |||| |||| |||||||||| ||||||||||||| ||||||||||| ||||||||||   ||||| |||| ||| ||| |    
T  20918642 cttagttaaataacaaactgcaacataggcagtatgcaaaccatcatgatataataatatcgaatgtaaatcaacaa---ctcaattatcaaacttaagt 20918738  T
Q  100 catataatgtatatacaattatataacagtagcagcaacat 140  Q
    ||| |||||||||||||||||||||||| ||  ||||||||    
T  20918739 catgtaatgtatatacaattatataacattataagcaacat 20918779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 52928053 - 52927938
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||||||            ||||||||||||| |||||||||    
T  52928053 cttagttaaataacaaacaacaacatagacagtatgcaaatcatcatgatataacaatatcgaat------------catctcaaatatcaaacataatt 52927966  T
Q  100 catataatgtatatacaattatataaca 127  Q
    ||| ||||||||||||||||||||||||    
T  52927965 catgtaatgtatatacaattatataaca 52927938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 12 - 199
Target Start/End: Complemental strand, 21861642 - 21861453
Alignment:
Q  12 aacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaata-tca-acataattcatataatgt 109  Q
    |||||||| |||| |||| |||||||||| || ||||||||||||||||| ||||||| ||| |||||||||||| | ||| | ||||||||  ||||||    
T  21861642 aacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatctcaaacattcatatataattcaagtaatgt 21861543  T
Q  110 atatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    |||||||||||||| ||| ||  | |||||| | |  |||  ||||| | ||||||||||||||| ||||| ||||| ||||||||||||    
T  21861542 atatacaattatatcacattataaacaacatcatatcataatattcaggcttactgaaacaacaatagcaagataaacaacttagtttct 21861453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 44 - 199
Target Start/End: Original strand, 50686694 - 50686850
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatataacagtagcagcaacatta 142  Q
    ||||||||||||||| || |||||||||||||||||||||||| |||| | ||||||||| ||||| ||||||| |||||| ||| ||  | ||||||      
T  50686694 tcatgatataacaatgtcaaatgcaaatcaacaacatctcaaacatcatatataattcatgtaatgcatatacatttatatcacattattaacaacatcg 50686793  T
Q  143 gaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    ||  |||||||||| | |||||||||||||||||| || ||||  ||||||||||||    
T  50686794 gatcatataattcaggcttactgaaacaacaacagtaagataagcaacttagtttct 50686850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 226 - 364
Target Start/End: Original strand, 21754351 - 21754489
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcgttcttaaactattcc-agattcaatcttaatttccaatctt 324  Q
    ||||||||||||| |||||| |||||||| |||||||||||| ||  || | |||||| |||| ||| | |||| || ||||||||   | |||||||||    
T  21754351 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttcacaaaattcattct-aaagtcttcccaggttcaatctctttctccaatctt 21754449  T
Q  325 tcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  21754450 tcctaatcattattagacatgttcaggcactcaaaaacat 21754489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 21896339 - 21896142
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaata-tca-acataat 98  Q
    |||||||||  |||||||| |||| |||| ||||| |||| || ||||||||||||||||| ||||||| ||| |||||||||||| | ||| | |||||    
T  21896339 cttagttaataaacaaacagcaacataggcagtatacaaaacagcatgatataacaatatcaaatgcaagtcatcaacatctcaaacattcatatataat 21896240  T
Q  99 tcatataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttc 198  Q
    |||| |||||||||||||||||||| ||| ||  | |||||| | |  |||  ||||| | |||||||||||||||   ||| ||||| |||||||||||    
T  21896239 tcatgtaatgtatatacaattatatcacattataaacaacatcaaatcataatattcaggcttactgaaacaacaa---caagataaacaacttagtttc 21896143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 49261628 - 49261690
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgag 260  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||    
T  49261628 ctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctattcgccatggcgag 49261690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 30 - 127
Target Start/End: Original strand, 51130631 - 51130726
Alignment:
Q  30 tagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatataaca 127  Q
    ||||||||||| ||||||||||||| ||||||||||| ||||||||||   ||||| ||||| || ||| |||| ||||||||||||||||||||||||    
T  51130631 tagtatgcaaaccatcatgatataataatatcgaatgtaaatcaacaa---ctcaattatcagacttaagtcatgtaatgtatatacaattatataaca 51130726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 199
Target Start/End: Complemental strand, 16368324 - 16368170
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaac-ataattcatataatgtatatacaattatataacagtagcagcaacatta 142  Q
    |||||||||||||||||| |||||||||||||||||||||||  |||    ||||||||| ||||| ||||||| |||||| ||| ||  | |||||| |    
T  16368324 tcatgatataacaatatc-aatgcaaatcaacaacatctcaac-atcgtttataattcatgtaatgcatatacatttatatcacattattaacaacatca 16368227  T
Q  143 gaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
     |  |||||||||| | |||||||||||||||||| || ||||| |||||| |||||    
T  16368226 aatcatataattcaggcttactgaaacaacaacagtaagataaacaacttaatttct 16368170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 199
Target Start/End: Complemental strand, 50614155 - 50613999
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataattcatataatgtatatacaattatataacagtagcagcaacatta 142  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||    ||||||||| ||||| ||||||| |||||| ||| ||  | |||||| |    
T  50614155 tcatgatataacaatatcaaatgcaaatcaacaacatctcaaacatcttttataattcatgtaatgcatatacatttatatcacattaatatcaacatca 50614056  T
Q  143 gaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
     |  |||||||||| | ||||||||  |||||| | || | ||| ||||||||||||    
T  50614055 aatcatataattcaggcttactgaagtaacaacggtaagacaaacaacttagtttct 50613999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 199
Target Start/End: Complemental strand, 50621983 - 50621827
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataattcatataatgtatatacaattatataacagtagcagcaacatta 142  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||    ||||||||| ||||| ||||||| |||||| ||| ||  | |||||| |    
T  50621983 tcatgatataacaatatcaaatgcaaatcaacaacatctcaaacatcttttataattcatgtaatgcatatacatttatatcacattaatatcaacatca 50621884  T
Q  143 gaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
     |  |||||||||| | ||||||||  |||||| | || | ||| ||||||||||||    
T  50621883 aatcatataattcaggcttactgaagtaacaacggtaagacaaacaacttagtttct 50621827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 16 - 140
Target Start/End: Complemental strand, 22130975 - 22130853
Alignment:
Q  16 aacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataattcatataatgtatata 114  Q
    |||| |||| |||| ||||| |||| ||||||||||||| ||||||||||| ||||||||||   ||||| |||| ||| ||| |||| ||||| |||||    
T  22130975 aacagcaacataggcagtatccaaaccatcatgatataataatatcgaatgtaaatcaacaa---ctcaattatcaaacttaagtcatgtaatgcatata 22130879  T
Q  115 caattatataacagtagcagcaacat 140  Q
    ||||||||||||| ||  ||||||||    
T  22130878 caattatataacattataagcaacat 22130853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 35261161 - 35261086
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaaca 76  Q
    |||||||||  |||||||| |||| |||| |||||||||| || ||||||||||||||||| ||||||||||||||    
T  35261161 cttagttaataaacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaaatcaaca 35261086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 16758687 - 16758812
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatca--tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataa 97  Q
    ||||||||||||||||||| |||| |||| |||||||||| ||  |||||||||||||||||| ||| |||  |||||||||| |||   ||| | ||||    
T  16758687 cttagttaaataacaaacagcaacataggcagtatgcaaaccagttcatgatataacaatatcaaatacaatacaacaacatcacaacattcatatataa 16758786  T
Q  98 ttcatataatgtatatacaattatat 123  Q
    ||||  ||||| ||||||||||||||    
T  16758787 ttcaagtaatgcatatacaattatat 16758812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 127
Target Start/End: Original strand, 21161783 - 21161878
Alignment:
Q  31 agtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaat-atcaacataattcatataatgtatatacaattatataaca 127  Q
    ||||||||||||||| ||||||||||||||||||||||| ||| ||||   ||| || |||||||||| ||||| ||||| |||||| ||||||||||    
T  21161783 agtatgcaaatcatcgtgatataacaatatcgaatgcaattcatcaac--ttcatatcatcaacataaatcatacaatgtttatacacttatataaca 21161878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 177
Target Start/End: Complemental strand, 41050074 - 41049941
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatataacagtagcagcaacatta 142  Q
    |||||||||||||||||| ||||||||||||||||||||| || |||| | ||||||||  ||||| |||||||| ||||| ||| ||  | |||| | |    
T  41050074 tcatgatataacaatatcaaatgcaaatcaacaacatctc-aacatcatatataattcaagtaatgcatatacaaatatatcacattattaacaacgtca 41049976  T
Q  143 gaatatataattcaagtttactgaaacaacaacag 177  Q
     |  |||||||||| | ||||||||||||||||||    
T  41049975 aatcatataattcaggcttactgaaacaacaacag 41049941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 266
Target Start/End: Original strand, 26065227 - 26065295
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcagg 266  Q
    |||||||||| |||||||||||||  | ||||||||||||| |||||||||||| || |||||||||||    
T  26065227 ctaaacaaggtattctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcagg 26065295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 285 - 364
Target Start/End: Original strand, 43697735 - 43697814
Alignment:
Q  285 ttcttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||||||||||||| || ||||| ||| |  ||||||| |||||||| | || ||||||||||||||||||||||||    
T  43697735 ttcttaaactattccaggttaaatctcaatctagaatcttttctaatcataaatagacatgttcaggcactcaaaaacat 43697814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 123
Target Start/End: Complemental strand, 16093923 - 16093843
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaa-caacatctcaaatatca-acataattcatataatgtatatacaattatat 123  Q
    |||||||||||||||||| |||||||||||| |||||||||||| |||| |  |||||||| |||||||||||||| |||||    
T  16093923 tcatgatataacaatatc-aatgcaaatcaaacaacatctcaaacatcataggtaattcatgtaatgtatatacaaatatat 16093843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 20919012 - 20919051
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  20919012 tctttcctaatcattattagacatgttcaggcactcaaaa 20919051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 22355895 - 22355856
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  22355895 tctttcctaatcattattagacatgttcaggcactcaaaa 22355856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 22357581 - 22357542
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  22357581 tctttcctaatcattattagacatgttcaggcactcaaaa 22357542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 22532680 - 22532719
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  22532680 tctttcctaatcattattagacatgttcaggcactcaaaa 22532719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 27250450 - 27250411
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  27250450 tctttcctaatcattattagacatgttcaggcactcaaaa 27250411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 34510191 - 34510230
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  34510191 tctttcctaatcattattagacatgttcaggcactcaaaa 34510230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 38801112 - 38801069
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||    
T  38801112 tctttcctaatcattattagacatgttcaggcactcaaagacat 38801069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 296 - 359
Target Start/End: Complemental strand, 50209948 - 50209885
Alignment:
Q  296 ttccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaa 359  Q
    |||||| |||||||| | | | || ||||||||||||||||||| |||||||||||||||||||    
T  50209948 ttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaa 50209885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 45574970 - 45574846
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaat-catcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--a 97  Q
    |||||||||||||||| || |||| |||| ||||||||||  || ||||| |||| |||| | ||||||| |||||||| |||||| ||| ||||||  |    
T  45574970 cttagttaaataacaa-cagcaacataggcagtatgcaaaaacagcatgacataataataccaaatgcaagtcaacaacgtctcaattattaacatataa 45574872  T
Q  98 ttcatataatgtatatacaattatat 123  Q
    ||||  ||||| ||||||||||||||    
T  45574871 ttcaagtaatgcatatacaattatat 45574846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 357
Target Start/End: Complemental strand, 21895975 - 21895906
Alignment:
Q  288 ttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactca 357  Q
    ||||||| | |||| |||||||| ||| |  || ||||||||||||||||||||| ||||||||||||||    
T  21895975 ttaaactttcccaggttcaatctcaatctaaaaactttcctaatcattattatacttgttcaggcactca 21895906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 357
Target Start/End: Original strand, 26065372 - 26065441
Alignment:
Q  288 ttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactca 357  Q
    ||||||| | |||| |||||||| ||| |  || ||| ||||||||||||||||||||||||||||||||    
T  26065372 ttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactca 26065441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 360
Target Start/End: Complemental strand, 16367953 - 16367881
Alignment:
Q  288 ttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||| |||||| |||| ||| ||| |  || ||| ||||||||||||||||||| |||||||||||||||    
T  16367953 ttaaacttttccaggttcattctcaatctaaaaacttgcctaatcattattatacatattcaggcactcaaaa 16367881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 360
Target Start/End: Complemental strand, 21301245 - 21301209
Alignment:
Q  324 ttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||||| ||||||||||||||||||||    
T  21301245 ttcctaatcattattagacatgttcaggcactcaaaa 21301209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 123
Target Start/End: Original strand, 26065021 - 26065100
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatat 123  Q
    |||||||||||||||| | |||||||||||||||||||||||| |||| | ||||||||  ||||  |||||||| |||||    
T  26065021 tcatgatataacaatacc-aatgcaaatcaacaacatctcaaagatcatatataattcaagtaatacatatacaaatatat 26065100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 226 - 360
Target Start/End: Original strand, 433322 - 433457
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaa-attcgttcttaaactattccagattcaatcttaatttccaatctt 324  Q
    ||||||||||||| |||||| |||||||| ||||||||||||   | || | ||  ||| |||| |||   |||||| |||||||| | | | || ||||    
T  433322 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaatctcattctacattctt 433421  T
Q  325 tcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||| || |||||||||| |||||||||    
T  433422 tcctaatcattaatagacatgttcagacactcaaaa 433457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 20135598 - 20135637
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  20135598 tctttcctaatcattattagacatgttcaagcactcaaaa 20135637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 20846940 - 20846901
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||| |||||||||||||| ||||||||||||||||||||    
T  20846940 tcttacctaatcattattagacatgttcaggcactcaaaa 20846901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 357
Target Start/End: Complemental strand, 35260760 - 35260729
Alignment:
Q  326 cctaatcattattatacatgttcaggcactca 357  Q
    ||||||||||||||||||||||||||||||||    
T  35260760 cctaatcattattatacatgttcaggcactca 35260729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 322 - 360
Target Start/End: Original strand, 16381652 - 16381690
Alignment:
Q  322 ctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  16381652 ctttcctaatcattcttatacatgtccaggcactcaaaa 16381690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 364
Target Start/End: Original strand, 16759142 - 16759180
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  16759142 cctaatcattattatacgtgtttaggcactcaaaaacat 16759180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 364
Target Start/End: Complemental strand, 27652850 - 27652812
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||||||||||| ||| |||||||||||||||||||    
T  27652850 cctaatcattattatgcatattcaggcactcaaaaacat 27652812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 364
Target Start/End: Complemental strand, 41049673 - 41049635
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||| |||||||||||||||||||||||||| ||||||    
T  41049673 cctaaccattattatacatgttcaggcactcagaaacat 41049635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 364
Target Start/End: Original strand, 48521060 - 48521098
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  48521060 cctaatcattattatacatattcaggtactcaaaaacat 48521098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 360
Target Start/End: Complemental strand, 52940506 - 52940472
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||| ||||||||||||||||||||||||||||    
T  52940506 cctaattattattatacatgttcaggcactcaaaa 52940472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 265
Target Start/End: Original strand, 20918915 - 20918956
Alignment:
Q  224 agctcgcgaggcgagggcctctactcgccattgcgagttcag 265  Q
    ||||||||||||||| |||||| |||||||| ||||||||||    
T  20918915 agctcgcgaggcgagagcctctgctcgccatggcgagttcag 20918956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 357
Target Start/End: Complemental strand, 21861237 - 21861168
Alignment:
Q  288 ttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactca 357  Q
    ||||||| | |||| |||||||| ||| |  || ||| ||||||||||||||||| ||||||||||||||    
T  21861237 ttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacttgttcaggcactca 21861168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 265
Target Start/End: Complemental strand, 21861372 - 21861335
Alignment:
Q  228 cgcgaggcgagggcctctactcgccattgcgagttcag 265  Q
    |||||||||||||||||||||||| || ||||||||||    
T  21861372 cgcgaggcgagggcctctactcgctatggcgagttcag 21861335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 35260913 - 35260860
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgc 251  Q
    |||| ||||| ||| |||||||||  | ||||||||||||||||||||||||||    
T  35260913 ctaagcaaggtattttgtaactgggaaactcgcgaggcgagggcctctactcgc 35260860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 38801198 - 38801157
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggt 267  Q
    ||||||||||||| ||||||||||||| | ||||||||||||    
T  38801198 ctcgcgaggcgagagcctctactcgccgtggcgagttcaggt 38801157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 50210296 - 50210212
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaat-catcatgatataacaatatcgaatgcaaatcaacaacatctcaa 85  Q
    |||||||||||||||| || |||| |||| ||||| ||||  || ||||| |||| |||||| ||||||| |||||||||||||||    
T  50210296 cttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaa 50210212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 123
Target Start/End: Original strand, 433085 - 433168
Alignment:
Q  42 catcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaac--ataattcatataatgtatatacaattatat 123  Q
    ||||| || |||| |||||| ||||||| ||||||||||||||| |||  ||  ||||||||  ||||| ||||||||||||||    
T  433085 catcaagacataataatatcaaatgcaagtcaacaacatctcaattattcacatataattcaagtaatgcatatacaattatat 433168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 360
Target Start/End: Original strand, 50687046 - 50687118
Alignment:
Q  288 ttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||| | |||| |||||||| ||| |  || ||| ||||||||||||||||||| | |||||||||||||    
T  50687046 ttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatatacaggcactcaaaa 50687118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 4e-72; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 25175888 - 25176089
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 100  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25175888 cttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 25175987  T
Q  101 atataatgtatatacaattatataacagtagcagcaacattagaatata-taattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    |||||| ||||||| |||||||||||| || || ||||||||||  ||| ||||||| | ||||||||||||||||||||| ||||| ||||||||||||    
T  25175988 atataacgtatatataattatataacattaacaacaacattagatcatattaattcaggcttactgaaacaacaacagcaagataaacaacttagtttct 25176087  T
Q  200 aa 201  Q
    ||    
T  25176088 aa 25176089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 28406014 - 28406216
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaa-tcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataatt 99  Q
    ||||||||||||||||||| |||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  28406014 cttagttaaataacaaacagcaacataggcagtatgcaaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacttaatt 28406113  T
Q  100 catataatgtatatacaattatataacagtagcagcaacattagaatata-taattcaagtttactgaaacaacaacagcaaaataaataacttagtttc 198  Q
    |||| |||||||||||||||||||| || || || ||||| ||||  ||| ||| | | | ||||| ||||||||||||||| ||||| |||||||||||    
T  28406114 cataaaatgtatatacaattatataccattaacaacaacaatagatcatattaaattaggcttactaaaacaacaacagcaagataaacaacttagtttc 28406213  T
Q  199 taa 201  Q
    |||    
T  28406214 taa 28406216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 197 - 364
Target Start/End: Original strand, 25176128 - 25176296
Alignment:
Q  197 tctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattc-gttcttaaacta 295  Q
    ||||||||||||||||||||||||   || |||||||||||||||||||||||||||| ||||||||||||  ||||||| ||| || ||||||||||||    
T  25176128 tctaaacaaggcattctgtaactgcgcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtctaactctcaaaaatctgttcttaaacta 25176227  T
Q  296 ttccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    |||||| |||||||| ||| ||||| ||||||||||||| |||| ||||||||||||||||||||||||    
T  25176228 ttccaggttcaatctcaatctccaacctttcctaatcataattagacatgttcaggcactcaaaaacat 25176296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 7816 - 7617
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaata-tca-acataat 98  Q
    |||||||||  |||||||| |||| |||| |||||||||| || ||||||||||||||||| ||||||| ||| |||||||||||| | ||| | |||||    
T  7816 cttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaacatctcaaacattcatatataat 7717  T
Q  99 tcatataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttc 198  Q
    |||  |||||||||||||||||||| ||| || || |||||||| |  |||||||||| | ||||||||||||||||| ||  ||||| |||||||||||    
T  7716 tcaagtaatgtatatacaattatatcacattaacaacaacattaaatcatataattcaggcttactgaaacaacaacaacatgataaacaacttagtttc 7617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 7679623 - 7679749
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||| |||| || ||| |||||||  ||| ||| |||||||||    
T  7679623 cttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatc-aatgtaagtcatcaacatcataaacatcaaacataatt 7679721  T
Q  100 catataatgtatatacaattatataaca 127  Q
    ||| ||||||||||| ||||||||||||    
T  7679722 catgtaatgtatatataattatataaca 7679749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 18786986 - 18786787
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatca--tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaa-cataa 97  Q
    |||||||||||||||| ||  ||| ||||||||||||||| ||  ||||||||||||||| || ||||||| |||||||| || |||  ||||| |||||    
T  18786986 cttagttaaataacaatcagtaacataggtagtatgcaaaccagttcatgatataacaatctcaaatgcaattcaacaacgtcacaac-atcaaacataa 18786888  T
Q  98 ttcatataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagttt 197  Q
    ||||| |||||||||||||| ||||||||| || ||  ||||||  |  |||||||| | | ||||||||||||||||||||  ||||| ||||||||||    
T  18786887 ttcatgtaatgtatatacaactatataacattatcaataacattcaatcatataatttaggcttactgaaacaacaacagcatgataaacaacttagttt 18786788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 198 - 364
Target Start/End: Complemental strand, 23708451 - 23708286
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactat 296  Q
    ||||||||| |||||||||||||| || ||||| ||||||| |||||||||||| || ||||||||||||| ||||| |  |||| | ||||||||||||    
T  23708451 ctaaacaag-cattctgtaactgggtaactcgcaaggcgagagcctctactcgctatggcgagttcaggtgtaactcccaaaaatccattcttaaactat 23708353  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||| |||||||||| ||| | | | ||||||||||||||| || | |||||||| |||||||||||||    
T  23708352 tcc-gattcaatctcaatctacgaactttcctaatcattaatacatatgttcagacactcaaaaacat 23708286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 22134289 - 22134175
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 100  Q
    |||||||||||| ||| || |||| |||| ||||||||||||||||| ||||||||||||||||||| |||||| |||||||||  |||||||||||| |    
T  22134289 cttagttaaatatcaa-cagcaacataggcagtatgcaaatcatcataatataacaatatcgaatgc-aatcaataacatctcatttatcaacataatcc 22134192  T
Q  101 atataatgtatatacaa 117  Q
    || ||||||||||||||    
T  22134191 atttaatgtatatacaa 22134175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 23072032 - 23071893
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    |||||||||||||| ||||||||| |||| |||||||||| ||||||||||||| ||||||||||  |||||| |||   ||||| |||| ||| ||| |    
T  23072032 cttagttaaataacgaacaacaacataggcagtatgcaaaccatcatgatataataatatcgaatataaatcagcaa---ctcaattatcaaacttaagt 23071936  T
Q  100 catataatgtatatacaattatataacagtagcagcaacatta 142  Q
    ||| |||||||||||||||||||||||| ||  ||||||||||    
T  23071935 catgtaatgtatatacaattatataacattataagcaacatta 23071893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 44 - 198
Target Start/End: Original strand, 23791356 - 23791511
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatataacagtagcagcaacatta 142  Q
    ||||||||||| |||||| |||||||||||||||||||||||| || | | ||||||||| ||||| ||||||| |||||| ||| ||  | |||||| |    
T  23791356 tcatgatataaaaatatcaaatgcaaatcaacaacatctcaaacattatatataattcatgtaatgcatatacatttatatcacattattaacaacatca 23791455  T
Q  143 gaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttc 198  Q
     |  |||||||||| | ||||||||||||||||| ||| ||||| |||||||||||    
T  23791456 aatcatataattcaggcttactgaaacaacaacaacaagataaacaacttagtttc 23791511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 19671868 - 19671991
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataatt 99  Q
    ||||||||| |||||| || |||| |||| |||||||||| ||||||||||||| ||||||||| |||| | |||||||||||||   ||| | ||||||    
T  19671868 cttagttaattaacaatcagcaacataggcagtatgcaaaacatcatgatataataatatcgaacgcaagtaaacaacatctcaatattcacatataatt 19671967  T
Q  100 catataatgtatatacaattatat 123  Q
    ||  ||||| ||||||||||||||    
T  19671968 caagtaatgcatatacaattatat 19671991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 227 - 360
Target Start/End: Complemental strand, 22134020 - 22133888
Alignment:
Q  227 tcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcgttcttaaactattcc-agattcaatcttaatttccaatcttt 325  Q
    |||||||||||| |||||| |||||||| |||||||||| | ||  || | |||||| |||| ||| | |||| || |||||||| | | ||||||||||    
T  22134020 tcgcgaggcgagagcctctgctcgccatggcgagttcagtt-cagttcacaaaattcattct-aaagtcttcctaggttcaatctcattctccaatcttt 22133923  T
Q  326 cctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||| ||||||||||||||||||||    
T  22133922 cctaatcattattagacatgttcaggcactcaaaa 22133888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 23207315 - 23207515
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatca--tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataat 98  Q
    |||||||||  |||||||| |||| |||| |||||  ||| ||  |||||||||||||||||| ||||||||||||| |||||||||   |  | |||||    
T  23207315 cttagttaataaacaaacagcaacataggcagtatataaaacagttcatgatataacaatatcaaatgcaaatcaacgacatctcaacattataaataat 23207414  T
Q  99 tcatataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttc 198  Q
    |||| ||||| ||||||| |||||| ||| ||  | |||||| | |  |||||||||| | |||||  ||||||||||| || ||||  |||||||||||    
T  23207415 tcatgtaatgcatatacatttatatcacattattaacaacatcaaatcatataattcaggcttacttgaacaacaacagtaagataagcaacttagtttc 23207514  T
Q  199 t 199  Q
    |    
T  23207515 t 23207515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 23708702 - 23708578
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat--caacataat 98  Q
    ||||||||||||||| | | |||| |||| |||||||||| || ||||||||||||||||| | ||||||||| | |||||||||| ||   || |||||    
T  23708702 cttagttaaataacagatagcaacataggcagtatgcaaaacaacatgatataacaatatcaattgcaaatcatcgacatctcaaacattcaaatataat 23708603  T
Q  99 tcatataatgtatatacaattatat 123  Q
    |||  ||||| ||||||||||||||    
T  23708602 tcaagtaatgcatatacaattatat 23708578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 199
Target Start/End: Original strand, 25108970 - 25109126
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatataacagtagcagcaacatta 142  Q
    |||||||||||||||||| ||   |||||||||| |||||||| |||| | ||||||||| ||||| ||||||| |||||| | | ||  | |||||| |    
T  25108970 tcatgatataacaatatcaaagcaaaatcaacaatatctcaaacatcatatataattcatgtaatgcatatacatttatatcatattattaacaacatca 25109069  T
Q  143 gaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
     |  |||||||||| | |||||||||||||||||| || ||||  ||||||||||||    
T  25109070 aatcatataattcaggcttactgaaacaacaacagtaagataagcaacttagtttct 25109126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 229 - 360
Target Start/End: Original strand, 28406297 - 28406429
Alignment:
Q  229 gcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcg-ttcttaaactattccagattcaatcttaatttccaatctttcc 327  Q
    |||||||||| ||||||||||||||| |||||||||||| ||  || | |||||   |||| |||   || ||| |||||||| | | ||||||||||||    
T  28406297 gcgaggcgagagcctctactcgccatggcgagttcaggttcagttcacaaaattttattctaaaatctttacaggttcaatctcattctccaatctttcc 28406396  T
Q  328 taatcattattatacatgttcaggcactcaaaa 360  Q
    |||| ||||||| ||||||||||||||||||||    
T  28406397 taattattattagacatgttcaggcactcaaaa 28406429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 44 - 123
Target Start/End: Complemental strand, 20520231 - 20520152
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatat 123  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||| | ||||||||  ||||| |||||||| |||||    
T  20520231 tcatgatataacaatatc-aatgcaaatcaacaacatctcaaacatcatatataattcaagtaatgcatatacaaatatat 20520152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 22413221 - 22413095
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatca--tcatgatataacaatat--cgaatgcaaatcaacaacatctcaaatatca-acat 95  Q
    |||||||||  ||||||||||||| |||| |||||  ||| ||  |||||||||||||||||  | ||||||||||||||||||||| || |||| | ||    
T  22413221 cttagttaataaacaaacaacaacataggcagtatataaaacagctcatgatataacaatatatcaaatgcaaatcaacaacatctc-aacatcataaat 22413123  T
Q  96 aattcatataatgtatatacaattatat 123  Q
    ||||||| ||||| ||||||| ||||||    
T  22413122 aattcatgtaatgcatatacatttatat 22413095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 23004835 - 23004915
Alignment:
Q  48 gatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatataaca 127  Q
    ||||||| |||||| |||||||||||||||||||||||| |||| | ||||| || |||||| |||||||| ||| |||||    
T  23004835 gatataataatatcaaatgcaaatcaacaacatctcaaacatcatatataatccacataatgcatatacaaatatttaaca 23004915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 360
Target Start/End: Original strand, 23660408 - 23660472
Alignment:
Q  296 ttccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||| |||||||| | | | || ||||||||||||||||||| ||||||||||||||||||||    
T  23660408 ttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaa 23660472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 123
Target Start/End: Complemental strand, 24697645 - 24697565
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatat 123  Q
    |||||||||||||||||| ||||||| ||||||||||||||||  ||| | | ||||||| ||||| ||||||| ||||||    
T  24697645 tcatgatataacaatatcaaatgcaattcaacaacatctcaaacttcatatacaattcatgtaatgcatatacatttatat 24697565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 298525 - 298486
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  298525 tctttcctaatcattattagacatgttcaggcactcaaaa 298486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 22730943 - 22730904
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  22730943 tctttcctaatcattattagacatgttcaggcactcaaaa 22730904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 23071673 - 23071634
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  23071673 tctttcctaatcattattagacatgttcaggcactcaaaa 23071634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 22105447 - 22105571
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaat-catcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--a 97  Q
    |||||||||||||||| || |||| |||| ||||||||||  || ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |    
T  22105447 cttagttaaataacaa-cagcaacataggcagtatgcaaaaacagcatgacataataatatcaaatgcaagtcaacaacttctcaattattcacatataa 22105545  T
Q  98 ttcatataatgtatatacaattatat 123  Q
    ||||  ||||| ||||||||||||||    
T  22105546 ttcaagtaatgcatatacaattatat 22105571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 364
Target Start/End: Original strand, 23005221 - 23005259
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  23005221 cctaatcattcttatacatgttcaggcactcaaaaacat 23005259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 267
Target Start/End: Original strand, 23076731 - 23076797
Alignment:
Q  201 aacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggt 267  Q
    ||||||||| |||||  |||| || ||||||||||||| ||||||||||||| | ||||||||||||    
T  23076731 aacaaggcactctgtttctgggtaactcgcgaggcgagagcctctactcgccgtggcgagttcaggt 23076797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 322 - 360
Target Start/End: Complemental strand, 39827648 - 39827610
Alignment:
Q  322 ctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  39827648 ctttcctaatcattattatacatattcaggcactcaaaa 39827610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 323 - 360
Target Start/End: Complemental strand, 37835 - 37798
Alignment:
Q  323 tttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  37835 tttcctaatcattattagacatgttcaggcactcaaaa 37798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 298898 - 298809
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgc-aaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    ||||||||||||||||||| |||| |||| ||||| | |||||| ||||| ||||  ||||| | ||||| |||||||||||| ||||||    
T  298898 cttagttaaataacaaacagcaacataggcagtatacaaaatcagcatgacataaatatatcaattgcaattcaacaacatcttaaatat 298809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 357
Target Start/End: Complemental strand, 20519821 - 20519790
Alignment:
Q  326 cctaatcattattatacatgttcaggcactca 357  Q
    ||||||||||||||||||||||||||||||||    
T  20519821 cctaatcattattatacatgttcaggcactca 20519790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 22737890 - 22737851
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  22737890 tctttcctaatcattattagatatgttcaggcactcaaaa 22737851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 23076851 - 23076890
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||| ||||||| ||||||||||||||||||||    
T  23076851 tctttcctaattattattagacatgttcaggcactcaaaa 23076890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 357
Target Start/End: Original strand, 23207770 - 23207801
Alignment:
Q  326 cctaatcattattatacatgttcaggcactca 357  Q
    ||||||||||||||||||||||||||||||||    
T  23207770 cctaatcattattatacatgttcaggcactca 23207801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 23286261 - 23286300
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| |||||||||| |||||||||    
T  23286261 tctttcctaatcattattagacatgttcagacactcaaaa 23286300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 23654120 - 23654081
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||| ||||||    
T  23654120 tctttcctaatcattattagacatgttcaggcagtcaaaa 23654081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 27753986 - 27754025
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||| ||||||||||||    
T  27753986 tctttcctaatcattattagacatgttgaggcactcaaaa 27754025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 28292012 - 28291973
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||| ||| ||||||||||||||||||||    
T  28292012 tctttcctaatcattcttagacatgttcaggcactcaaaa 28291973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 31756229 - 31756268
Alignment:
Q  223 tagctcgcgaggcgagggcctctactcgccattgcgagtt 262  Q
    |||||||||||||||| ||||||||||||||| |||||||    
T  31756229 tagctcgcgaggcgagagcctctactcgccatggcgagtt 31756268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 325 - 360
Target Start/End: Complemental strand, 32451635 - 32451600
Alignment:
Q  325 tcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||| ||||||||||||||||||||    
T  32451635 tcctaatcattattaaacatgttcaggcactcaaaa 32451600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 360
Target Start/End: Original strand, 34137412 - 34137446
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||| ||||||||||||||||||||||||    
T  34137412 cctaatcattcttatacatgttcaggcactcaaaa 34137446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 298621 - 298580
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggt 267  Q
    ||||||||||||| ||||||||||||| | ||||||||||||    
T  298621 ctcgcgaggcgagagcctctactcgccgtggcgagttcaggt 298580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 357
Target Start/End: Complemental strand, 22412802 - 22412733
Alignment:
Q  288 ttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactca 357  Q
    ||||||| | |||| |||||||| ||| |  || ||| |||||||||||| |||||||||||||||||||    
T  22412802 ttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattatcatacatgttcaggcactca 22412733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 23207569 - 23207634
Alignment:
Q  201 aacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcagg 266  Q
    |||||||  ||||||||||||  | ||||| ||||||| |||||||||||| || |||||||||||    
T  23207569 aacaaggtgttctgtaactgggcaactcgcaaggcgagagcctctactcgctatggcgagttcagg 23207634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 266
Target Start/End: Complemental strand, 20520025 - 20519957
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcagg 266  Q
    |||||||||| ||||||||||| |  | ||||||||||||| |||||||| ||| || |||| ||||||    
T  20520025 ctaaacaaggtattctgtaactaggcaactcgcgaggcgagagcctctacacgctatggcgacttcagg 20519957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 23130940 - 23131027
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  23130940 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 23131027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 23133407 - 23133494
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  23133407 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 23133494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 23660061 - 23660148
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    |||||||||| ||||| || |||| |||| ||||| | || ||  |||| |||| |||||| |||||||||||||||||||| ||||||    
T  23660061 cttagttaaacaacaa-cagcaacataggcagtatacgaaacaggatgacataataatatcaaatgcaaatcaacaacatcttaaatat 23660148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 24898279 - 24898192
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  24898279 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 24898192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 24900762 - 24900675
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  24900762 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 24900675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 24903239 - 24903152
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  24903239 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 24903152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 24905716 - 24905629
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  24905716 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 24905629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 24908191 - 24908104
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  24908191 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 24908104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 26505457 - 26505544
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  26505457 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 26505544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 26507935 - 26508022
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  26507935 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 26508022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 31345201 - 31345277
Alignment:
Q  48 gatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatat 123  Q
    |||||||||||||| ||||  ||||||||||| || ||| |||| | |||||||| |||||| |||||||| |||||    
T  31345201 gatataacaatatcaaatgataatcaacaacaacttaaacatcatatataattcacataatgcatatacaaatatat 31345277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 34402606 - 34402519
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  34402606 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 34402519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 134; Significance: 1e-69; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 19302 - 19503
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 100  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19302 cttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 19401  T
Q  101 atataatgtatatacaattatataacagtagcagcaacattagaatata-taattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    |||||||||||||||||||||||| || || || ||||||||||  ||| ||| ||| | ||||||||||||||||| ||| ||||| ||||||||||||    
T  19402 atataatgtatatacaattatataccattaacaacaacattagatcatattaaatcagggttactgaaacaacaacatcaagataaacaacttagtttct 19501  T
Q  200 aa 201  Q
    ||    
T  19502 aa 19503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 203 - 364
Target Start/End: Original strand, 19558 - 19720
Alignment:
Q  203 caaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactc-tctaaattcgttcttaaactattccag 301  Q
    |||| |||||||||||||| |   |||||||||||| |||||| |||||||| ||||||||||||||||| | |  |||||| |||| |||   ||||||    
T  19558 caagacattctgtaactgggtcattcgcgaggcgagagcctctgctcgccatggcgagttcaggtgcaacacataaaaattcattctaaaatctttccag 19657  T
Q  302 attcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
     |||||||| | | ||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  19658 gttcaatctcattctccaatccttcctaatcattattagacatgttcaggcactcaaaaacat 19720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 134; Significance: 1e-69; HSPs: 82)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 67783 - 67983
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 100  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  67783 cttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctc-aatatcaacataattc 67881  T
Q  101 atataatgtatatacaattatataacagtagcagcaacattagaatata-taattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    ||||||||||||||||||||||||||| || || ||||||||||  ||| ||||||| | | ||||||||||||||||||| ||||| ||||||||||||    
T  67882 atataatgtatatacaattatataacattaacaacaacattagatcatattaattcaggctcactgaaacaacaacagcaagataaacaacttagtttct 67981  T
Q  200 aa 201  Q
    ||    
T  67982 aa 67983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 16219800 - 16219599
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaa-cataatt 99  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||| ||||| |||||||    
T  16219800 cttagttaaataacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatcttaaacatcaaacataatt 16219701  T
Q  100 catataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    ||| |||||||||||||||||||||||| || || |||||||||| ||||||||||| | ||||||||||||||||||||| ||||| ||||||||||||    
T  16219700 catgtaatgtatatacaattatataacattaacaacaacattagattatataattcaggcttactgaaacaacaacagcaagataaacaacttagtttct 16219601  T
Q  200 aa 201  Q
    ||    
T  16219600 aa 16219599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 18005684 - 18005885
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 100  Q
    ||||||||||||||||||| |||| || | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18005684 cttagttaaataacaaacagcaacataagcagtatggaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 18005783  T
Q  101 atataatgtatatacaattatataacagtagcagcaacattagaatata-taattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    |||||||||||||||||||||||| || || || ||||||||||  ||| ||| ||| | ||||||||||||||||||||| ||||| ||||||||||||    
T  18005784 atataatgtatatacaattatataccattaacaacaacattagatcatattaaatcaggcttactgaaacaacaacagcaagataaacaacttagtttct 18005883  T
Q  200 aa 201  Q
    ||    
T  18005884 aa 18005885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 198 - 364
Target Start/End: Original strand, 47832096 - 47832262
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcgttcttaaactatt 297  Q
    |||||||| |||||||||||||||  || |||||||||||||||||||||||||||| ||||||||| ||| ||||||| ||||||||||||||||||||    
T  47832096 ctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcatgtgtaactctcaaaattcgttcttaaactatt 47832195  T
Q  298 ccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  47832196 ccagattcaatcttaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacat 47832262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 47831845 - 47832046
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaa-cataatt 99  Q
    |||||||||||||||||||||||| |||  |||||||| |||||||||||||||||||||||||||||| ||| |||||||  ||| ||||| |||||||    
T  47831845 cttagttaaataacaaacaacaacatagacagtatgcatatcatcatgatataacaatatcgaatgcaagtcatcaacatcataaacatcaaacataatt 47831944  T
Q  100 catataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    |||||||||||||||||||||||||||| ||||  |||||||||| |||| |||||| | ||||||||||||||||| ||| ||||||||||||||||||    
T  47831945 catataatgtatatacaattatataacattagcgacaacattagattatacaattcaggcttactgaaacaacaacaacaagataaataacttagtttct 47832044  T
Q  200 aa 201  Q
    ||    
T  47832045 aa 47832046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 811214 - 811013
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaa-cataatt 99  Q
    ||||||||||||||||| | |||| |||| ||||||||||||||||||||||||||||||||||||||| |||  ||||||  ||| ||||| |||||||    
T  811214 cttagttaaataacaaatagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcattaacatcataaacatcaaacataatt 811115  T
Q  100 catataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    ||| |||||||||||||||||||||||| ||||| |||||||||| |||| |||||| | |||||||||| |||||||||| ||||||||||||||||||    
T  811114 catgtaatgtatatacaattatataacattagcaacaacattagattatacaattcaggcttactgaaactacaacagcaagataaataacttagtttct 811015  T
Q  200 aa 201  Q
    ||    
T  811014 aa 811013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 44014216 - 44014398
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 100  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  44014216 cttagttaaataacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaaat---caacatctcaaatatcaacataattc 44014312  T
Q  101 atataatgtatatacaattatataacagtagcagcaacattagaatata-taattcaagtttactgaaacaacaacagcaaaataa 185  Q
    |||||||||||||||| ||||||| || ||  | ||||||||||  ||| ||||||| | ||||||||||||||||||||| ||||    
T  44014313 atataatgtatatacagttatataccattaaaaacaacattagatcatattaattcaggcttactgaaacaacaacagcaagataa 44014398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 198 - 364
Target Start/End: Complemental strand, 9389529 - 9389362
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactat 296  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||| || ||||| | ||||||||||||||||||||    
T  9389529 ctaaacaaggcattctgtaactgcttagctcgcgaggcgagagcctctactcgccatggcgagttcagctgtaactcacataaattcgttcttaaactat 9389430  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||| |||||||| ||| | ||||||||||||||||| |||||||| || ||| |||||||||||||    
T  9389429 tccaggttcaatctcaatctacaatctttcctaatcatcattatacaagtccagacactcaaaaacat 9389362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 16056366 - 16056564
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaa-cataatt 99  Q
    ||||||||||||||||||| |||| |||  | |||||||| || ||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||    
T  16056366 cttagttaaataacaaacagcaacatagacattatgcaaa-caacatgatataacaatatcaaatgcaaatcaacaacatctcaaacatcaaacataatt 16056464  T
Q  100 catataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    ||| |||||||||||||||||||||||| || || |||||||||| ||||| ||||| | |||| |||||||||||| ||| ||||| ||||||||||||    
T  16056465 catgtaatgtatatacaattatataacattaacaacaacattagattatatcattcaggcttaccgaaacaacaacatcaagataaacaacttagtttct 16056564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 198 - 364
Target Start/End: Original strand, 68033 - 68200
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactat 296  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||  || ||||| |  || || ||||||||| |||    
T  68033 ctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcgagttcatctgtaactcccacaagtttgttcttaaattat 68132  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||| |||||||| ||| |||||||||||||||||||||||| |||| ||||||||||| |||||||    
T  68133 tccaggttcaatctcaatctccaatctttcctaatcattattagacatattcaggcactcgaaaacat 68200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 198 - 364
Target Start/End: Original strand, 44014461 - 44014628
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactat 296  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||| ||||||||||||||||||  |  |||||| |||| |||   |    
T  44014461 ctaaacaaggcattctgtaaccggttagctcgcgaggcgagagcctctactcaccatggcgagttcaggtgcaactaacaaaaattcattctaaaatctt 44014560  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||| |||||||| | | |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  44014561 tccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacat 44014628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 201 - 364
Target Start/End: Original strand, 16324296 - 16324460
Alignment:
Q  201 aacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactattcc 299  Q
    |||||||||||||||||||||  || |||| ||||||||||||||||||||||| ||||||||   |  |||||||  ||||||||||||||||||||||    
T  16324296 aacaaggcattctgtaactgggcagttcgcaaggcgagggcctctactcgccatggcgagttccaatctaactctcaaaaattcgttcttaaactattcc 16324395  T
Q  300 agattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    || |||||||| ||  |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  16324396 aggttcaatctcaaactccaatctttcctaatcattattagacatgttcaagcactcaaaaacat 16324460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 22072951 - 22073149
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatc-atcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaa-cataat 98  Q
    |||||||||||||||||||||||| |||| | |||||||| | | ||||||||||||||||| |||| || |||||||||||||||| ||||| |||||     
T  22072951 cttagttaaataacaaacaacaacataggcactatgcaaaaccagcatgatataacaatatcaaatgtaagtcaacaacatctcaaacatcaaacataaa 22073050  T
Q  99 -tcatataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtt 196  Q
     |||| |||||||||| ||||||||||||| || || |||||||||| ||||||||||| | ||||||||||||||||| ||| | ||| |||||||||    
T  22073051 ctcatgtaatgtatatgcaattatataacattaacaacaacattagattatataattcaggcttactgaaacaacaacatcaagacaaacaacttagtt 22073149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 201 - 364
Target Start/End: Complemental strand, 16219547 - 16219383
Alignment:
Q  201 aacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaa-ttcgttcttaaactattcc 299  Q
    ||||||||||||||||||| |  | ||||||||||||||||||||||||||||| ||||||||| ||| ||||| | ||| ||| |||||||||||||||    
T  16219547 aacaaggcattctgtaactagacaactcgcgaggcgagggcctctactcgccatggcgagttcacgtgtaactcccaaaaattcattcttaaactattcc 16219448  T
Q  300 agattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    || |||||||| ||| |  ||||||||||||||||||||||||| ||| || |||||||||||||    
T  16219447 aggttcaatctcaatctaaaatctttcctaatcattattatacaagtttagacactcaaaaacat 16219383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 198 - 360
Target Start/End: Complemental strand, 12255624 - 12255462
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaa-ttcgttcttaaactat 296  Q
    ||||||||| ||||||||||||||  | ||||||||||||| |||||||||||| || ||||||||||||| ||||| | ||| ||| ||||||||||||    
T  12255624 ctaaacaag-cattctgtaactgggaaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaactcccaaaaattcattcttaaactat 12255526  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||| |||||||| ||| |  ||||||||||||||||||||||||||||||| ||||||||||    
T  12255525 tccaggttcaatctcaatctagaatctttcctaatcattattatacatgttcaagcactcaaaa 12255462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 201 - 362
Target Start/End: Original strand, 22073206 - 22073368
Alignment:
Q  201 aacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactattcc 299  Q
    ||||| ||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||| ||||| |  |||| | ||||||||||||||     
T  22073206 aacaaagcattctgtaactgggtaactcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattct 22073305  T
Q  300 agattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaac 362  Q
    || |||||||| | | |  ||||||| ||||||||||||| ||||||||||||||||||||||    
T  22073306 aggttcaatctcattctagaatcttttctaatcattattacacatgttcaggcactcaaaaac 22073368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 15754970 - 15754831
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    ||||||||||||||||| |||||  ||||||||||||||| ||||||||||||| ||||||||||||||||||||||   |||||||||| ||||||| |    
T  15754970 cttagttaaataacaaataacaatataggtagtatgcaaaccatcatgatataataatatcgaatgcaaatcaacaa---ctcaaatatcaaacataagt 15754874  T
Q  100 catataatgtatatacaattatataacagtagcagcaacatta 142  Q
    ||| |||||||||||||||||||||||| ||  ||||||||||    
T  15754873 catgtaatgtatatacaattatataacattataagcaacatta 15754831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 12901361 - 12901560
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatca--tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataa 97  Q
    |||||||||  ||||||||||||| |||| ||||| ||||  |  |||||||||||||||||| |||||||| || ||||||| |||  |||| ||||||    
T  12901361 cttagttaataaacaaacaacaacataggcagtatacaaaataattcatgatataacaatatcaaatgcaaaacagcaacatcacaac-atcatacataa 12901459  T
Q  98 ttcatataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagttt 197  Q
    ||||| |||||||||||||| ||||||||| || || |||||||| |  |||||||||||| ||||||||||||||||| ||| ||||| ||||||||||    
T  12901460 ttcatgtaatgtatatacaactatataacattaacaacaacattaaatcatataattcaagcttactgaaacaacaacaacaagataaacaacttagttt 12901559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 201 - 360
Target Start/End: Original strand, 16056618 - 16056778
Alignment:
Q  201 aacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactattcc 299  Q
    ||||||||||||||||||||| || ||||||||||||| |||||||||||| || ||||||||||||| || || |  |||| | |||||||||||||||    
T  16056618 aacaaggcattctgtaactgggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaattcccaaaaatccattcttaaactattcc 16056717  T
Q  300 agattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    || |||||||| ||| |  ||||||||||| ||||||||||||||||||||| || |||||    
T  16056718 aggttcaatctcaatctaaaatctttcctattcattattatacatgttcaggtacacaaaa 16056778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 16495440 - 16495564
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataatt 99  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||||||||| ||||||||||| ||||||||||   ||||| ||||| || ||| |    
T  16495440 cttagttaaataacaaacaacaacataggcagtatgcaaaccatcatgatataataatatcgaatgtaaatcaacaa---ctcaattatcagacttaagt 16495536  T
Q  100 catataatgtatatacaattatataaca 127  Q
    ||| ||||||||||||||||||||||||    
T  16495537 catgtaatgtatatacaattatataaca 16495564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 11996110 - 11995971
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    ||||||||| |||||||||||||| |||| |||||||||| ||||||||||||| ||||| ||||| ||||||||||   |||||||||| ||| ||| |    
T  11996110 cttagttaattaacaaacaacaacataggcagtatgcaaaccatcatgatataataatattgaatgtaaatcaacaa---ctcaaatatcaaacttaagt 11996014  T
Q  100 catataatgtatatacaattatataacagtagcagcaacatta 142  Q
    ||| |||||||||||||||||||||||| ||  ||||||||||    
T  11996013 catgtaatgtatatacaattatataacattataagcaacatta 11995971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 34200824 - 34200963
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    ||||||||||||||||||| |||| |||| |||||||||| ||||||||||||| ||||||||||| ||||||||||   ||||| |||| ||| ||| |    
T  34200824 cttagttaaataacaaacagcaacataggcagtatgcaaaccatcatgatataataatatcgaatgtaaatcaacaa---ctcaattatcaaacttaagt 34200920  T
Q  100 catataatgtatatacaattatataacagtagcagcaacatta 142  Q
    ||| |||||||||||||||||||||||| ||  ||||||||||    
T  34200921 catgtaatgtatatacaattatataacattataagcaacatta 34200963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 226 - 360
Target Start/End: Complemental strand, 2279924 - 2279789
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcg-ttcttaaactattccagattcaatcttaatttccaatctt 324  Q
    |||||||||||||||||||||||||| || ||||||||||||| ||| | | ||| ||  ||||||||||||| ||| |||||||| ||| |  ||||||    
T  2279924 ctcgcgaggcgagggcctctactcgctatggcgagttcaggtgtaacacccaaaaatccattcttaaactattacaggttcaatctcaatctaaaatctt 2279825  T
Q  325 tcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||||| |||||||||||||||||||    
T  2279824 tcctaatcattattatgcatgttcaggcactcaaaa 2279789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 198 - 364
Target Start/End: Original strand, 18005934 - 18006095
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactat 296  Q
    |||||||||||||| ||||||| || |  |||||||||||||||||||| ||||||| ||||||||||||  ||||| |  || ||||||||||||||||    
T  18005934 ctaaacaaggcattttgtaactagtcaattcgcgaggcgagggcctctagtcgccatggcgagttcaggtataactcccacaagttcgttcttaaactat 18006033  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    |  || |||||||      || |||||||| |||||||||||| ||||||||||||||||||||||||    
T  18006034 tttaggttcaatc------tcaaatctttcataatcattattagacatgttcaggcactcaaaaacat 18006095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 226 - 364
Target Start/End: Complemental strand, 810935 - 810796
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaa-ttcgttcttaaactattccagattcaatcttaatttccaatctt 324  Q
    ||||||||||||| ||||||||||||||| |||||||||||| ||  || | ||| ||| |||| ||    |||||| |||||||||| | |||||||||    
T  810935 ctcgcgaggcgagagcctctactcgccatggcgagttcaggtacagttcacaaaaattcattctaaattctttccaggttcaatcttattctccaatctt 810836  T
Q  325 tcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  810835 tcctaatcattattagatatgttcaggcactcaaaaacat 810796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 70 - 201
Target Start/End: Complemental strand, 9389710 - 9389579
Alignment:
Q  70 atcaacaacatctcaaatatcaacataattcatataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaac 169  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| || || ||| ||||||||||| ||| || | |||||| ||     
T  9389710 atcaacaacatctcatatatcaacataattcatacaatgtatatacaattatataacattatcatcaatattagaatatacaatccaggcttactggaat 9389611  T
Q  170 aacaacagcaaaataaataacttagtttctaa 201  Q
     |||||| |||  |  ||||||||||||||||    
T  9389610 gacaacatcaaggtcgataacttagtttctaa 9389579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 2280202 - 2280114
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    |||||||||  ||||||||||||| |||| |||||||||| || |||||||||| |||||| |||||||||||||||||||||||||||    
T  2280202 cttagttaataaacaaacaacaacataggcagtatgcaaaacagcatgatataataatatcaaatgcaaatcaacaacatctcaaatat 2280114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 28505381 - 28505242
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    ||||||||||||||||||| |||| |||| |||||||||| ||||||||||||| ||||||| ||  |||||| |||   ||||| |||| ||| ||| |    
T  28505381 cttagttaaataacaaacagcaacataggcagtatgcaaaccatcatgatataataatatcggatataaatcagcaa---ctcaattatcaaacttaagt 28505285  T
Q  100 catataatgtatatacaattatataacagtagcagcaacatta 142  Q
    ||| |||||||||||||||||||||||| ||  ||||||||||    
T  28505284 catgtaatgtatatacaattatataacattataagcaacatta 28505242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 12255876 - 12255789
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatca--tcatgatataacaatatcgaatgcaaatcaacaacatctcaaa 86  Q
    |||||||||||||||||||||||| |||  |||||||||||||  |||||||||||||||||| |||| || || |||||||||||||    
T  12255876 cttagttaaataacaaacaacaacatagtcagtatgcaaatcaattcatgatataacaatatcaaatgaaattctacaacatctcaaa 12255789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 15008582 - 15008458
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatca--tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataa 97  Q
    |||||||||  ||||||||||||| ||||||||||  ||| ||  |||||||||||||||||| ||||||||||||||||| |||||| |||| | ||||    
T  15008582 cttagttaataaacaaacaacaacataggtagtatataaaacagttcatgatataacaatatc-aatgcaaatcaacaacacctcaaacatcatatataa 15008484  T
Q  98 ttcatataatgtatatacaattatat 123  Q
    ||||  ||||| |||||||| |||||    
T  15008483 ttcaagtaatgcatatacaaatatat 15008458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 226 - 360
Target Start/End: Complemental strand, 12756522 - 12756388
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaa--ttcgttcttaaactattccagattcaatcttaatttccaatct 323  Q
    ||||||||||||| ||||||||||||||| | |||||||||| || ||  | |||  ||| |||||||| || ||||| |||||||| | | | || |||    
T  12756522 ctcgcgaggcgagagcctctactcgccatggtgagttcaggt-cagcttccaaaaagttcattcttaaa-taatccaggttcaatctcattctacattct 12756425  T
Q  324 ttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||||| ||||||||||||||||||||    
T  12756424 ttcctaatcattattaaacatgttcaggcactcaaaa 12756388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 20220271 - 20220073
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatca--tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataa 97  Q
    |||||||||  ||||||||||||| |||| ||||   ||| ||  |||||||||||||||||| ||||||||||   ||||||||||| |||| | ||||    
T  20220271 cttagttaataaacaaacaacaacataggcagtacataaaacagttcatgatataacaatatcaaatgcaaatc---aacatctcaaacatcatatataa 20220175  T
Q  98 ttcatataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagttt 197  Q
    ||||| ||||| |||||||||||||| ||| ||  | |||||| | |  || ||| ||| | |||||| ||||||||||| || ||||  ||||||||||    
T  20220174 ttcatgtaatgcatatacaattatatcacattattaacaacatcaaatcatctaaatcaggcttactggaacaacaacagtaagataagcaacttagttt 20220075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 1868078 - 1867954
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatca--tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataa 97  Q
    |||||||||  ||| ||||||||| |||| |||||  ||| ||  |||||||||||||||||| ||||||||| |||||||||||||| |||| | ||||    
T  1868078 cttagttaataaactaacaacaacataggcagtatataaaacagctcatgatataacaatatc-aatgcaaatgaacaacatctcaaacatcatatataa 1867980  T
Q  98 ttcatataatgtatatacaattatat 123  Q
    ||||| ||||| |||||||| |||||    
T  1867979 ttcatgtaatgcatatacaaatatat 1867954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 16324172 - 16324244
Alignment:
Q  129 tagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttctaa 201  Q
    ||||| |||||||||| |||| |||||| | ||||||||||||||||||||| || || ||||||||||||||    
T  16324172 tagcaacaacattagattatacaattcaggcttactgaaacaacaacagcaagatcaacaacttagtttctaa 16324244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 360
Target Start/End: Complemental strand, 17061766 - 17061631
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcg-ttcttaaa-ctattccagattcaatcttaatttccaatct 323  Q
    ||||||||||||| ||||||||||||||| ||||||||||||   | |||| || ||   |||| ||| |||| |||| |||||||| | | | || |||    
T  17061766 ctcgcgaggcgagagcctctactcgccatcgcgagttcaggtcagattctcaaagttttattctaaaatctat-ccaggttcaatctcattctacattct 17061668  T
Q  324 ttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||||| ||||||||||||||||||||    
T  17061667 ttcctaatcattattaaacatgttcaggcactcaaaa 17061631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 11995768 - 11995725
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  11995768 tctttcctaatcattattagacatgttcaggcactcaaaaacat 11995725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 230 - 364
Target Start/End: Complemental strand, 21064964 - 21064829
Alignment:
Q  230 cgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcg-ttcttaaactattccagattcaatcttaatttccaatctttcct 328  Q
    ||||||||| ||||||||||||||| ||||||| ||||  ||| ||| ||| ||  |||| | |||||||||  |||||||| | | |  ||| ||||||    
T  21064964 cgaggcgagagcctctactcgccatggcgagttaaggtaaaacactcaaaaatccattctgacactattccaagttcaatctcattctaaaatatttcct 21064865  T
Q  329 aatcattattatacatgttcaggcactcaaaaacat 364  Q
    |||||||||| ||||||||||||| |||| ||||||    
T  21064864 aatcattattgtacatgttcaggccctcataaacat 21064829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 28505011 - 28504968
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  28505011 tctttcctaatcattattagacatgttcaggcactcaaaaacat 28504968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 14044832 - 14044913
Alignment:
Q  47 tgatataacaatatcgaatgcaaatcaa-caacatctcaaatatca-acataattcatataatgtatatacaattatataaca 127  Q
    ||||||||||||||| ||| |||||||| |||||||||||| |||| | ||||||||| |||||||||||||| |||||||||    
T  14044832 tgatataacaatatc-aatacaaatcaatcaacatctcaaacatcatatataattcatgtaatgtatatacaactatataaca 14044913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 14354862 - 14354943
Alignment:
Q  47 tgatataacaatatcgaatgcaaatcaa-caacatctcaaatatca-acataattcatataatgtatatacaattatataaca 127  Q
    ||||||||||||||| ||| |||||||| |||||||||||| |||| | ||||||||| |||||||||||||| |||||||||    
T  14354862 tgatataacaatatc-aatacaaatcaatcaacatctcaaacatcatatataattcatgtaatgtatatacaactatataaca 14354943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 359
Target Start/End: Complemental strand, 15143843 - 15143709
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaa-ttcgttcttaaactattccagattcaatcttaatttccaatctt 324  Q
    ||||||||||||| |||||| |||||||| |||||| |||||   | || | ||| ||| |||| |||   |||||| |||||||| | | |  ||||||    
T  15143843 ctcgcgaggcgagagcctctgctcgccatggcgagtacaggtcagaatcacaaaagttcattctaaaatctttccaggttcaatctcattctaaaatctt 15143744  T
Q  325 tcctaatcattattatacatgttcaggcactcaaa 359  Q
    ||||||||||||||| |||||||||||||||||||    
T  15143743 tcctaatcattattagacatgttcaggcactcaaa 15143709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 10063901 - 10063813
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    ||||||||| |||||| || |||| ||||  ||||||| | ||||||||||||| |||||||||  ||| | |||||||||||||||||    
T  10063901 cttagttaattaacaatcagcaacataggcggtatgcacaacatcatgatataataatatcgaacacaagtaaacaacatctcaaatat 10063813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 364
Target Start/End: Original strand, 14045202 - 14045278
Alignment:
Q  288 ttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||| | |||| |||||||| ||| |  || ||| ||||||||||||||||||| |||||||||||||||||||    
T  14045202 ttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatattcaggcactcaaaaacat 14045278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 364
Target Start/End: Original strand, 14355232 - 14355308
Alignment:
Q  288 ttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||| | |||| |||||||| ||| |  || ||| ||||||||||||||||||| |||||||||||||||||||    
T  14355232 ttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatattcaggcactcaaaaacat 14355308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 360
Target Start/End: Original strand, 38227866 - 38227930
Alignment:
Q  296 ttccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||| |||||||| | | | || ||||||||||||||||||| ||||||||||||||||||||    
T  38227866 ttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaa 38227930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 3564074 - 3564035
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  3564074 tctttcctaatcattattagacatgttcaggcactcaaaa 3564035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 9509600 - 9509639
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  9509600 tctttcctaatcattattagacatgttcaggcactcaaaa 9509639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 12699243 - 12699282
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  12699243 tctttcctaatcattattagacatgttcaggcactcaaaa 12699282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 15754597 - 15754558
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  15754597 tctttcctaatcattattagacatgttcaggcactcaaaa 15754558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 16385968 - 16385929
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  16385968 tctttcctaatcattattagacatgttcaggcactcaaaa 16385929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 130
Target Start/End: Original strand, 18430787 - 18430877
Alignment:
Q  42 catcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaac--ataattcatataatgtatatacaattatataacagta 130  Q
    |||||||| |||| |||||| ||||||| ||||||||||||||| |||  ||  ||||||||  ||||| |||||||||||||| ||||||    
T  18430787 catcatgacataataatatcaaatgcaagtcaacaacatctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 18430877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 40443788 - 40443827
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  40443788 tctttcctaatcattattagacatgttcaggcactcaaaa 40443827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 364
Target Start/End: Complemental strand, 9177294 - 9177256
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  9177294 cctaatcattcttatacatgttcaggcactcaaaaacat 9177256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 13647363 - 13647487
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaat-catcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--a 97  Q
    |||||||||||||||| || |||| |||| ||||||||||  || ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |    
T  13647363 cttagttaaataacaa-cagcaacataggcagtatgcaaaaacagcatgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataa 13647461  T
Q  98 ttcatataatgtatatacaattatat 123  Q
    ||||  ||||| ||||||||||||||    
T  13647462 ttcaagtaatgcatatacaattatat 13647487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 265
Target Start/End: Complemental strand, 9177472 - 9177431
Alignment:
Q  224 agctcgcgaggcgagggcctctactcgccattgcgagttcag 265  Q
    |||||||||||||||||||||||||||| || ||||||||||    
T  9177472 agctcgcgaggcgagggcctctactcgctatggcgagttcag 9177431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 357
Target Start/End: Original strand, 12901783 - 12901852
Alignment:
Q  288 ttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactca 357  Q
    ||||||| | |||| |||||||| ||| |  || ||| ||||||||||||||||||||||||||||||||    
T  12901783 ttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactca 12901852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 1867729 - 1867653
Alignment:
Q  288 ttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||| | |||| |||||||| ||| |  || ||| ||||||||||||||||||| |||||||||| ||||||||    
T  1867729 ttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatattcaggcactaaaaaacat 1867653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 123
Target Start/End: Complemental strand, 19486807 - 19486703
Alignment:
Q  21 caacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaat-atca-acataattcatataatgtatatacaat 118  Q
    |||| |||| |||||||||| ||||||||||||| ||||||| | | || | ||||||||||||||| |||| | ||||||||  | ||| |||||||||    
T  19486807 caacataggcagtatgcaaaacatcatgatataataatatcgcacgtaagtaaacaacatctcaaataatcacatataattcaagttatgcatatacaat 19486708  T
Q  119 tatat 123  Q
    |||||    
T  19486707 tatat 19486703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 38227519 - 38227606
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    ||||||||||||||||  | |||| |||| ||||| |||| || ||||| |||| |||||| ||||||| |||||||||||| ||||||    
T  38227519 cttagttaaataacaat-agcaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatat 38227606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 27847554 - 27847515
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||| |||| ||||||||||||||||||||    
T  27847554 tctttcctaatcataattagacatgttcaggcactcaaaa 27847515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 360
Target Start/End: Complemental strand, 2529682 - 2529648
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| |||||||||||||||    
T  2529682 cctaatcattattatacatattcaggcactcaaaa 2529648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 2832016 - 2831978
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaa 359  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  2832016 tctttcctaatcaatattagacatgttcaggcactcaaa 2831978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 9751260 - 9751222
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaa 359  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  9751260 tctttcctaatcaatattagacatgttcaggcactcaaa 9751222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 360
Target Start/End: Complemental strand, 11768568 - 11768534
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||| ||||||||||||||||||||||||    
T  11768568 cctaatcattcttatacatgttcaggcactcaaaa 11768534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 364
Target Start/End: Original strand, 14036690 - 14036728
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  14036690 cctaatcattattttacatattcaggcactcaaaaacat 14036728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 14045036 - 14045102
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttca 264  Q
    |||||||||| |||||| ||||||  |||||||||||||||   |||||||||| || |||||||||    
T  14045036 ctaaacaaggtattctgaaactgggcagctcgcgaggcgagccactctactcgctatggcgagttca 14045102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 364
Target Start/End: Original strand, 14346720 - 14346758
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  14346720 cctaatcattattttacatattcaggcactcaaaaacat 14346758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 264
Target Start/End: Original strand, 14355066 - 14355132
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttca 264  Q
    |||||||||| |||||| ||||||  |||||||||||||||   |||||||||| || |||||||||    
T  14355066 ctaaacaaggtattctgaaactgggcagctcgcgaggcgagccactctactcgctatggcgagttca 14355132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 357
Target Start/End: Complemental strand, 15008148 - 15008118
Alignment:
Q  327 ctaatcattattatacatgttcaggcactca 357  Q
    |||||||||||||||||||||||||||||||    
T  15008148 ctaatcattattatacatgttcaggcactca 15008118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 39267356 - 39267318
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaa 359  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  39267356 tctttcctaatcaatattagacatgttcaggcactcaaa 39267318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 44116915 - 44116953
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaa 359  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  44116915 tctttcctaatcattattagacatgttcagggactcaaa 44116953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 26212034 - 26212122
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaa-tcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    |||||||||||||||| || |||| |||| ||||| |||| ||| ||||| |||| |||||| | ||||| |||||||||||| ||||||    
T  26212034 cttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatcttaaatat 26212122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 26212310 - 26212351
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggt 267  Q
    ||||||||||||| ||||||||||||| | ||||||||||||    
T  26212310 ctcgcgaggcgagagcctctactcgccgtggcgagttcaggt 26212351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 267
Target Start/End: Original strand, 44116804 - 44116861
Alignment:
Q  210 ttctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggt 267  Q
    |||||||||||  |  ||||||||||||| |||||| |||||||| ||||||||||||    
T  44116804 ttctgtaactgagtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggt 44116861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 123
Target Start/End: Complemental strand, 1858867 - 1858791
Alignment:
Q  48 gatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatat 123  Q
    |||||||||||||| ||||  ||||||||||| || ||| |||| | |||||||| |||||| |||||||| |||||    
T  1858867 gatataacaatatcaaatgataatcaacaacaacttaaacatcatatataattcacataatgcatatacaaatatat 1858791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 266
Target Start/End: Original strand, 14036486 - 14036554
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcagg 266  Q
    |||||||||| |||||| || |||  |||||||||||||||   |||||||||| || |||||||||||    
T  14036486 ctaaacaaggtattctgaaattggccagctcgcgaggcgagccactctactcgctatggcgagttcagg 14036554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 266
Target Start/End: Original strand, 14346516 - 14346584
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcagg 266  Q
    |||||||||| |||||| || |||  |||||||||||||||   |||||||||| || |||||||||||    
T  14346516 ctaaacaaggtattctgaaattggccagctcgcgaggcgagccactctactcgctatggcgagttcagg 14346584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 14949206 - 14949119
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  14949206 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 14949119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 266
Target Start/End: Complemental strand, 15008331 - 15008263
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcagg 266  Q
    |||||||||| |||||  ||||||  | ||||||||||||| |||||||||||| || | |||||||||    
T  15008331 ctaaacaaggtattctacaactgggcaactcgcgaggcgagagcctctactcgctatggtgagttcagg 15008263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 16324135 - 16324171
Alignment:
Q  48 gatataacaatatcgaatgcaaatcaacaacatctca 84  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  16324135 gatataacaatatcgaatgcaagtcatcaacatctca 16324171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 18302493 - 18302533
Alignment:
Q  225 gctcgcgaggcgagggcctctactcgccattgcgagttcag 265  Q
    |||||||||||||| |||||| |||||||| ||||||||||    
T  18302493 gctcgcgaggcgagagcctctgctcgccatggcgagttcag 18302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 18456476 - 18456408
Alignment:
Q  21 caacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    |||| |||| ||||| |||| || ||||| |||| |||||| ||||||| |||||||||||| ||||||    
T  18456476 caacataggcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatcttaaatat 18456408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 130; Significance: 3e-67; HSPs: 5)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 6573 - 6758
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 100  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6573 cttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 6672  T
Q  101 atataatgtatatacaattatataacagtagcagcaacattagaatata-taattcaagtttactgaaacaacaacagcaaaataa 185  Q
    |||||||||||||||||||||||| || || || ||||||||||  ||| ||||||| | ||||||||||||||||||||| ||||    
T  6673 atataatgtatatacaattatataccattaacaacaacattagatcatattaattcaggcttactgaaacaacaacagcaagataa 6758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 198 - 360
Target Start/End: Original strand, 6823 - 6987
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaa--ttcgttcttaaacta 295  Q
    |||||||||||||| ||||||| || |  |||||||| ||||||||| ||||||||| ||||||||||||  ||||| |  ||  |||||||||||||||    
T  6823 ctaaacaaggcattttgtaactagtcaattcgcgaggggagggcctccactcgccatggcgagttcaggtataactcccacaagtttcgttcttaaacta 6922  T
Q  296 ttccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||| |||||||| ||| |||||||||||||||| ||||||| |||||| |||||||||||||    
T  6923 ttccaggttcaatctcaatctccaatctttcctaattattattagacatgtccaggcactcaaaa 6987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 8504 - 8623
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaata-tca-acataat 98  Q
    |||||||||||||||||||||||| |||| |||||||||| || ||||||||||||||||| ||||||| ||| |||||||||||||| ||| | |||||    
T  8504 cttagttaaataacaaacaacaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatctcaaatattcatatataat 8603  T
Q  99 tcatataatgtatatacaat 118  Q
    |||  |||||||||||||||    
T  8604 tcaagtaatgtatatacaat 8623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 226 - 265
Target Start/End: Original strand, 8785 - 8824
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcag 265  Q
    |||||||||||||||||||||||||| || ||||||||||    
T  8785 ctcgcgaggcgagggcctctactcgctatggcgagttcag 8824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 360
Target Start/End: Original strand, 8961 - 8995
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||| ||||||||||||||||||||||||||||||    
T  8961 cctagtcattattatacatgttcaggcactcaaaa 8995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 130; Significance: 3e-67; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 100412 - 100613
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 100  Q
    ||||||||||||||||||| |||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  100412 cttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataataatatcgaatgcaaatcaacaacatctcaaatattaacataattc 100511  T
Q  101 atataatgtatatacaattatataacagtagcagcaacattagaatata-taattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    ||||||||||||||||||||||||||| || || ||||||||||  ||| ||||| | | ||||||||||||||||| ||| ||||| ||||||||||||    
T  100512 atataatgtatatacaattatataacattaacaacaacattagatcatattaatttaggcttactgaaacaacaacaacaagataaacaacttagtttct 100611  T
Q  200 aa 201  Q
    ||    
T  100612 aa 100613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 40257 - 40056
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 100  Q
    ||||||||||||| ||||| |||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40257 cttagttaaataataaacagcaacataggcagtaggcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 40158  T
Q  101 atataatgtatatacaattatataacagtagcagcaacattagaatata-taattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    |||||||||||||||||||||||| || || || |||||| |||  ||| ||||||| | ||||||||||||||||| |||  |||| ||||||||||||    
T  40157 atataatgtatatacaattatataccattaacaacaacataagatcatattaattcaggcttactgaaacaacaacatcaaggtaaacaacttagtttct 40058  T
Q  200 aa 201  Q
    ||    
T  40057 aa 40056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 198 - 339
Target Start/End: Complemental strand, 40006 - 39864
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactat 296  Q
    ||||| |||||||| ||||||| |||||||||||||||||| ||||||||| ||||| || |||||||||  ||||| |  || ||||||||||||||||    
T  40006 ctaaataaggcattttgtaactagttagctcgcgaggcgagagcctctacttgccatggcaagttcaggtataactcccacaagttcgttcttaaactat 39907  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattatta 339  Q
    ||||| || ||| | ||| ||||||||||||||| ||||||||    
T  39906 tccaggttgaatgtcaatctccaatctttcctaaccattatta 39864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 297 - 362
Target Start/End: Original strand, 101781 - 101846
Alignment:
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaac 362  Q
    ||||| |||||||| | | |||||||||||||||||||||||| ||||||||||||||||||||||    
T  101781 tccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaac 101846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 127; Significance: 2e-65; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 6 - 199
Target Start/End: Original strand, 10570 - 10764
Alignment:
Q  6 ttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataattcatat 104  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||| |||||||||||| |    
T  10570 ttaaataacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatctcaaacatcgaacataattcatgt 10669  T
Q  105 aatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    ||||||||||||||||||| ||| || || |||||||||| ||||||||||| | ||||||||||||||||||||| ||||| ||||||||||||    
T  10670 aatgtatatacaattatatgacattaacaacaacattagattatataattcaggcttactgaaacaacaacagcaagataaacaacttagtttct 10764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 201 - 364
Target Start/End: Original strand, 10818 - 10982
Alignment:
Q  201 aacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaa-ttcgttcttaaactattcc 299  Q
    ||||||||||| || |||| | || ||||||||||||| |||||||||||| || ||||||||||||| ||||| | ||| ||| |||||||||||||||    
T  10818 aacaaggcattttggaactaggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaactcacaaaaattcattcttaaactattcc 10917  T
Q  300 agattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    || |||||||| | | |   |||||||||||||||||||| ||||||||||||||||||||||||    
T  10918 aggttcaatctcagtctaggatctttcctaatcattattacacatgttcaggcactcaaaaacat 10982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 125; Significance: 3e-64; HSPs: 3)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 201 - 364
Target Start/End: Original strand, 13230 - 13394
Alignment:
Q  201 aacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactattcc 299  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |  |||||| |||||||||||||||    
T  13230 aacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcacaaaaattcattcttaaactattcc 13329  T
Q  300 agattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    || |||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  13330 aggttcaatcttaatctccaatctttcctaatcataattagacatgttcaggcactcaaaaacat 13394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 12980 - 13178
Alignment:
Q  4 agttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaa-cataattcat 102  Q
    ||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||| |||||||  ||| ||||| |||||||| |    
T  12980 agttaaataacaaacaacaacataggcagtatgcaaatcagcatgatataacaatatcgaatgcaagtcatcaacatcataaacatcaaacataattcgt 13079  T
Q  103 ataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttctaa 201  Q
     |||||||||||||||||||||||| ||||| |||||||||| |||  |||||| | ||||||||||||||||||||| ||||||||||||||||||||    
T  13080 gtaatgtatatacaattatataacattagcaacaacattagattatccaattcaggcttactgaaacaacaacagcaagataaataacttagtttctaa 13178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 44 - 199
Target Start/End: Complemental strand, 18277 - 18121
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatataacagtagcagcaacatta 142  Q
    ||||||||| |||||||| |||||||||||||||||||||||| |||| | ||||||||| ||||| ||||||| |||||| ||| ||  | |||||| |    
T  18277 tcatgatatgacaatatcaaatgcaaatcaacaacatctcaaacatcatatataattcatgtaatgcatatacatttatatcacattaataacaacatca 18178  T
Q  143 gaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
     || |||||||||| | ||||||||||||||||||  | ||||  ||||||||||||    
T  18177 aaacatataattcaggcttactgaaacaacaacagtgagataagcaacttagtttct 18121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 4e-63; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 198 - 364
Target Start/End: Complemental strand, 39706121 - 39705955
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcgttcttaaactatt 297  Q
    |||||||| |||||||||||||||  || |||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||    
T  39706121 ctaaacaaagcattctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaattcgttcttaaactatt 39706022  T
Q  298 ccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    |||| |||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||    
T  39706021 ccaggttcaatcttaatcttcaatctttcctaatcattattagacatgttcaggcactcaaaaacat 39705955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 39706371 - 39706179
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 100  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||  ||||||  ||| |||||||||||||    
T  39706371 cttagttaaataacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatgaacatcataaacatcaacataattc 39706272  T
Q  101 atataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataactta 193  Q
    || |||||||||||||||||||||||| ||||| ||||||||||  |||||||||| | ||||| ||||||||||||||| ||||| ||||||    
T  39706271 atgtaatgtatatacaattatataacattagcaacaacattagatcatataattcaggcttactaaaacaacaacagcaagataaacaactta 39706179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 198 - 364
Target Start/End: Original strand, 15099637 - 15099804
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactat 296  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |  |||||| ||||||||||||    
T  15099637 ctaaacaagacattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcacaaaaattcattcttaaactat 15099736  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||| |||||||| ||| | ||||||||||||||||| || ||||| ||||||||||||||||||||    
T  15099737 tccaggttcaatctcaatctacaatctttcctaatcatcatcatacaagttcaggcactcaaaaacat 15099804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 12288293 - 12288094
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatca--tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaa-cataa 97  Q
    ||||||||||||||||||| |||| |||| |||||||||| ||  |||||||||||||||||| ||||||| ||||||||||| |||  ||||| |||||    
T  12288293 cttagttaaataacaaacagcaacataggcagtatgcaaaccagttcatgatataacaatatcaaatgcaattcaacaacatcacaac-atcaaacataa 12288195  T
Q  98 ttcatataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagttt 197  Q
    ||||| |||||||||||||| ||||||||| || || |||||||| |  |||||||||| | ||||||||||||||||||||| ||||| ||||||||||    
T  12288194 ttcatgtaatgtatatacaactatataacattaccaacaacattaaatcatataattcaggcttactgaaacaacaacagcaagataaacaacttagttt 12288095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 199 - 364
Target Start/End: Original strand, 8846662 - 8846829
Alignment:
Q  199 taaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc--taaattcgttcttaaactat 296  Q
    |||||||| |||||||||||| |||||||||||||||||| ||||||||||||||| ||||||| ||||||||||| |   |||||| |||| |||   |    
T  8846662 taaacaagacattctgtaactagttagctcgcgaggcgagagcctctactcgccatggcgagttaaggtgcaactcacaaaaaattcattctaaaatctt 8846761  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||| |||||||| | | |||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  8846762 tccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggtactcaaaaacat 8846829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 12774045 - 12774160
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 100  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||| |    
T  12774045 cttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatac-aatcaacaacatctcaattatcaacataatcc 12774143  T
Q  101 atataatgtatatacaa 117  Q
    || ||||||||||||||    
T  12774144 atttaatgtatatacaa 12774160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 70 - 201
Target Start/End: Original strand, 15099456 - 15099587
Alignment:
Q  70 atcaacaacatctcaaatatcaacataattcatataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaac 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||| ||| || | |||||| ||     
T  15099456 atcaacaacatctcaaatatcaacataattcatataatgtatatacaattatataacattatcatcaacattagaatatacaatccaggcttactggaat 15099555  T
Q  170 aacaacagcaaaataaataacttagtttctaa 201  Q
     |||||| |||  |||||||||||||||||||    
T  15099556 gacaacatcaaggtaaataacttagtttctaa 15099587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 70 - 201
Target Start/End: Original strand, 15190423 - 15190554
Alignment:
Q  70 atcaacaacatctcaaatatcaacataattcatataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaac 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||||||||||||| ||| || | |||||| ||     
T  15190423 atcaacaacatctcaaatatcaacataattcatataatgtatatacaattatataacattatcatcaacattagaatatacaatccaggcttactggaat 15190522  T
Q  170 aacaacagcaaaataaataacttagtttctaa 201  Q
     |||||| |||  |||||||||||||||||||    
T  15190523 gacaacatcaaggtaaataacttagtttctaa 15190554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 198 - 364
Target Start/End: Original strand, 15190604 - 15190771
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactat 296  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||| || ||| | |  |||| | ||||||||||||    
T  15190604 ctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcgagtacagatgtaacgcccaaaaatccattcttaaactat 15190703  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||| || ||||| ||| |  || |||| |||||||| |||| ||||||||||||||||||||||||    
T  15190704 tccaggttaaatctcaatctagaaccttttctaatcataattagacatgttcaggcactcaaaaacat 15190771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 198 - 360
Target Start/End: Complemental strand, 15464763 - 15464600
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcg-ttcttaaactat 296  Q
    ||||||||| ||||||||||||||  | ||||||||||||| |||||||||||| || | ||||||||||| ||| | | ||| ||  ||||||||||||    
T  15464763 ctaaacaagtcattctgtaactgggcaactcgcgaggcgagagcctctactcgctatggtgagttcaggtgtaacacccaaaaatccattcttaaactat 15464664  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    | ||| |||||||| ||| |  |||||||||||||||||||||||||| |||||||||||||||    
T  15464663 ttcaggttcaatctcaatctaaaatctttcctaatcattattatacatattcaggcactcaaaa 15464600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 198 - 356
Target Start/End: Complemental strand, 52243026 - 52242868
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctcta-aattcgttcttaaactat 296  Q
    ||||||||| ||||||||||||||  | ||||||||||||| |||||||||||| || ||||||||||||| ||||| | | ||| | ||||||||||||    
T  52243026 ctaaacaag-cattctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaactcccaacaatgcattcttaaactat 52242928  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactc 356  Q
    ||||| |||||||| | | |  |||||||||| |||||||||||||||||||||||||||    
T  52242927 tccaggttcaatctcattctagaatctttcctgatcattattatacatgttcaggcactc 52242868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 16596686 - 16596825
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    ||||||||||||||||||| |||| ||||||||||||||| ||||||||||||| ||||||||||| |||||| |||   ||||| |||| ||| ||| |    
T  16596686 cttagttaaataacaaacagcaacataggtagtatgcaaaccatcatgatataataatatcgaatgtaaatcatcaa---ctcaattatcaaacttaagt 16596782  T
Q  100 catataatgtatatacaattatataacagtagcagcaacatta 142  Q
    ||| |||||||||||||||||||||||| ||  ||||||||||    
T  16596783 catgtaatgtatatacaattatataacattataagcaacatta 16596825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 15551855 - 15551993
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    ||||||||||||||||||| |||| |||| |||||||||  ||||||||||||| ||||||||| | ||||||||||   ||||| |||| ||| ||| |    
T  15551855 cttagttaaataacaaacagcaacataggcagtatgcaatccatcatgatataataatatcgaaggtaaatcaacaa---ctcaattatcaaacttaagt 15551951  T
Q  100 catataatgtatatacaattatataacagtagcagcaacatt 141  Q
    ||| |||||||||||||||||||||||| ||  |||||||||    
T  15551952 catgtaatgtatatacaattatataacattataagcaacatt 15551993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 224 - 364
Target Start/End: Original strand, 13844852 - 13844993
Alignment:
Q  224 agctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcg-ttcttaaactattccagattcaatcttaatttccaatc 322  Q
    ||||||||||||||| ||||||||||||||| || ||| |||||| ||||| | ||| ||  ||||||||||||||||| || |||||| || |  ||||    
T  13844852 agctcgcgaggcgagagcctctactcgccatggcaagtacaggtgtaactcccaaaaatccattcttaaactattccaggttaaatcttgatctagaatc 13844951  T
Q  323 tttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||| |||||||| |||| |||||||||| |||||||||||||    
T  13844952 ttttctaatcataattagacatgttcagacactcaaaaacat 13844993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 240 - 364
Target Start/End: Complemental strand, 43198380 - 43198255
Alignment:
Q  240 gcctctactcgccattgcgagttcaggtgcaactctctaaattcg-ttcttaaactattccagattcaatcttaatttccaatctttcctaatcattatt 338  Q
    |||||||||||| || | ||||||||||| ||||| | ||| ||  ||||||||||||||||  |||||||| ||| |  ||||||||||||||||||||    
T  43198380 gcctctactcgctatggtgagttcaggtgtaactcccaaaaatcaattcttaaactattccatgttcaatctcaatctaaaatctttcctaatcattatt 43198281  T
Q  339 atacatgttcaggcactcaaaaacat 364  Q
    | ||||||||||||||||||||||||    
T  43198280 acacatgttcaggcactcaaaaacat 43198255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 13934 - 13810
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaata-tca-acataat 98  Q
    |||||||||  |||||||| |||| |||| |||||||||| || ||||||||||||||||| ||||||| ||| |||||||||||||| ||| | |||||    
T  13934 cttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaacatctcaaatattcatatataat 13835  T
Q  99 tcatataatgtatatacaattatat 123  Q
    |||  ||||||||||||||||||||    
T  13834 tcaagtaatgtatatacaattatat 13810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 52 - 127
Target Start/End: Original strand, 8846461 - 8846537
Alignment:
Q  52 taacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataattcatataatgtatatacaattatataaca 127  Q
    |||||||||||||||||| ||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  8846461 taacaatatcgaatgcaagtcatcaacatctcaaatatcaaacataattcatgtaatgtatatacaattatataaca 8846537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 52243279 - 52243192
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatca--tcatgatataacaatatcgaatgcaaatcaacaacatctcaaa 86  Q
    ||||||||||||||||||| |||| |||| |||||||||||||  |||||||||||||||||| |||| || ||||||||||||||||    
T  52243279 cttagttaaataacaaacagcaacataggcagtatgcaaatcagttcatgatataacaatatcaaatgaaattcaacaacatctcaaa 52243192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 199
Target Start/End: Complemental strand, 53082190 - 53082035
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatataacagtagcagcaacatta 142  Q
    |||||||||||||||||| || ||||||||| ||||||||||| |||| | ||||||||| ||||| ||||||| |||||| ||| ||  | |||||| |    
T  53082190 tcatgatataacaatatcaaa-gcaaatcaataacatctcaaacatcatatataattcatgtaatgcatatacatttatatcacattattaacaacatca 53082092  T
Q  143 gaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
     |  |||||||||| | |||||||||||||||||| || ||||  ||||||||||||    
T  53082091 aatcatataattcaggcttactgaaacaacaacagtaagataagcaacttagtttct 53082035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 226 - 364
Target Start/End: Original strand, 12774314 - 12774452
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcgttcttaaactat-tccagattcaatcttaatttccaatctt 324  Q
    ||||||||||||| |||||| |||||||| |||||||||||| ||  || | |||||| |||| ||  | | ||||| |||||||| | | |||||||||    
T  12774314 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttcacaaaattcattct-aacgtctctccaggttcaatctcattctccaatctt 12774412  T
Q  325 tcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    | ||||||||||||| ||||||||||||||||||||||||    
T  12774413 ttctaatcattattagacatgttcaggcactcaaaaacat 12774452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 199
Target Start/End: Complemental strand, 46640494 - 46640339
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatataacagtagcagcaacatta 142  Q
    |||||||||||||||||| |||| ||||||| |||||||| || |||| | ||||||||| ||||| ||||||| |||||| |||  |  | |||||| |    
T  46640494 tcatgatataacaatatcaaatgaaaatcaataacatctc-aacatcatatataattcatgtaatgcatatacatttatatcacatcattaacaacatca 46640396  T
Q  143 gaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
     |  |||||||||| |||||||||||||| ||||| || ||||  ||||||||||||    
T  46640395 aatcatataattcaggtttactgaaacaataacagtaagataagcaacttagtttct 46640339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 43198638 - 43198512
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatca--tcatgatataacaatatcgaatgcaaatcaacaacatctcaaata-tca-acata 96  Q
    ||||||||||||||||||| |||| |||  | |||||||| ||  |||||||||||| ||||| ||||||| ||| ||| |||||||||| ||| | |||    
T  43198638 cttagttaaataacaaacagcaacatagacaatatgcaaaacaattcatgatataaccatatcaaatgcaagtcatcaatatctcaaatattcatatata 43198539  T
Q  97 attcatataatgtatatacaattatat 123  Q
    |||||  ||||||||||||||||||||    
T  43198538 attcaagtaatgtatatacaattatat 43198512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 198 - 364
Target Start/End: Complemental strand, 44928756 - 44928590
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaatt-cgttcttaaactat 296  Q
    ||||||||| |||||||||||||| |  ||||||||||||| |||||| |||||||| |||||||| |||   | || | || || | |||| |||   |    
T  44928756 ctaaacaag-cattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttctggtcagattcccaaagtttcattctaaaatctt 44928658  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||| |||||||| | | | || ||||||||||||||||||| | ||||||||||||||||||||||    
T  44928657 tccaggttcaatctcattctacattctttcctaatcattattagatatgttcaggcactcaaaaacat 44928590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 15464970 - 15464929
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaa 86  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  15464970 catgatataacaatatcaaatgcaaatcaacaacatctcaaa 15464929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 267
Target Start/End: Complemental strand, 21815464 - 21815396
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggt 267  Q
    ||||||||||| |||||||| |||  | ||||||||||||| ||||||||||||||| ||||||||||||    
T  21815464 ctaaacaaggc-ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaggt 21815396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 8846394 - 8846442
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatga 49  Q
    ||||||||||||||||||| |||| |||| |||||||||||||||||||    
T  8846394 cttagttaaataacaaacagcaacataggcagtatgcaaatcatcatga 8846442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 360
Target Start/End: Complemental strand, 15868378 - 15868306
Alignment:
Q  288 ttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||| | |||| |||||||| ||| |  || ||||||||||||||||||||||| |||||||||||||||    
T  15868378 ttaaactttcccaggttcaatctcaatctaaaaactttcctaatcattattatacatattcaggcactcaaaa 15868306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 360
Target Start/End: Original strand, 16597031 - 16597095
Alignment:
Q  296 ttccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||| |||||||| | | | || ||||||||||||||||||| ||||||||||||||||||||    
T  16597031 ttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaa 16597095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 3097043 - 3097086
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  3097043 tctttcctaatcattattagacatgttcaggcactcgaaaacat 3097086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 15552224 - 15552263
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  15552224 tctttcctaatcattattagacatgttcaggcactcaaaa 15552263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 16239702 - 16239663
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  16239702 tctttcctaatcattattagacatgttcaggcactcaaaa 16239663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 12903157 - 12903195
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaa 359  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  12903157 tctttcctaatcattattagacatgttcaggcactcaaa 12903195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 17046727 - 17046765
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaa 359  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  17046727 tctttcctaatcattattagacatgttcaggcactcaaa 17046765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 21815135 - 21815070
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttca 264  Q
    ||||||||||| |||||||| |||  | ||||||||||||| ||||||||||||||| |||||||||    
T  21815135 ctaaacaaggc-ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttca 21815070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 21818557 - 21818492
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttca 264  Q
    ||||||||||| |||||||| |||  | ||||||||||||| ||||||||||||||| |||||||||    
T  21818557 ctaaacaaggc-ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttca 21818492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 360
Target Start/End: Complemental strand, 13516 - 13444
Alignment:
Q  288 ttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||| | |||| |||||||| ||| |  || ||| ||||||||||||||||| |||||||||||||||||    
T  13516 ttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacttgttcaggcactcaaaa 13444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 357
Target Start/End: Original strand, 7089277 - 7089313
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactca 357  Q
    ||||||||||||||||||| |||||||||||||||||    
T  7089277 tctttcctaatcattattagacatgttcaggcactca 7089313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 16377604 - 16377522
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaa 85  Q
    |||||||||||||||| || |||| |||| ||||| |||| || ||||| |||| |||||| ||||||| |||||||||||||||    
T  16377604 cttagttaaataacaa-cagcaacataggcagtatacaaa-cagcatgacataataatatcaaatgcaagtcaacaacatctcaa 16377522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 226 - 265
Target Start/End: Complemental strand, 13655 - 13616
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcag 265  Q
    |||||||||||||||||||||||||| || ||||||||||    
T  13655 ctcgcgaggcgagggcctctactcgctatggcgagttcag 13616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 265
Target Start/End: Original strand, 3332173 - 3332240
Alignment:
Q  198 ctaaacaaggcattctgtaa--ctggttagctcgcgaggcgagggcctctactcgccattgcgagttcag 265  Q
    ||||||||||||||||||||  || ||  |||||||||||||| |||||| |||||||| ||||||||||    
T  3332173 ctaaacaaggcattctgtaatactagt--gctcgcgaggcgagagcctctgctcgccatggcgagttcag 3332240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 6190848 - 6190883
Alignment:
Q  325 tcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||| ||||||||||||||||||||    
T  6190848 tcctaatcattattaaacatgttcaggcactcaaaa 6190883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 14039060 - 14039099
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||| ||||||||||| ||||||||||||||||||||    
T  14039060 tctttccaaatcattattagacatgttcaggcactcaaaa 14039099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 14053023 - 14052984
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  14053023 tctttcctaatcattattagacatattcaggcactcaaaa 14052984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 21815013 - 21814974
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| |||||||||| |||||||||    
T  21815013 tctttcctaatcattattaaacatgttcagacactcaaaa 21814974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 21818435 - 21818396
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| |||||||||| |||||||||    
T  21818435 tctttcctaatcattattaaacatgttcagacactcaaaa 21818396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 265
Target Start/End: Original strand, 24029029 - 24029096
Alignment:
Q  198 ctaaacaaggcattctgtaa--ctggttagctcgcgaggcgagggcctctactcgccattgcgagttcag 265  Q
    ||||||||||||||||||||  || ||  |||||||||||||| |||||| |||||||| ||||||||||    
T  24029029 ctaaacaaggcattctgtaatactagt--gctcgcgaggcgagagcctctgctcgccatggcgagttcag 24029096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 20157000 - 20156962
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaa 359  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  20157000 tctttcctaatcaatattagacatgttcaggcactcaaa 20156962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 360
Target Start/End: Complemental strand, 32306624 - 32306590
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||||||||||| ||||||||||||    
T  32306624 cctaatcattattatacatgtttaggcactcaaaa 32306590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 7089191 - 7089232
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggt 267  Q
    ||||||||||||| |||||| |||||||| ||||||||||||    
T  7089191 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggt 7089232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 12774195 - 12774236
Alignment:
Q  160 ttactgaaacaacaacagcaaaataaataacttagtttctaa 201  Q
    |||||| |||||||||||||| ||||| ||||||||||||||    
T  12774195 ttactggaacaacaacagcaagataaacaacttagtttctaa 12774236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 364
Target Start/End: Complemental strand, 17047792 - 17047751
Alignment:
Q  323 tttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    |||||||||||||||||  |||||||||||||||||| ||||    
T  17047792 tttcctaatcattattagtcatgttcaggcactcaaagacat 17047751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 17047879 - 17047838
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggt 267  Q
    ||||||||||||| |||||| |||||||| ||||||||||||    
T  17047879 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggt 17047838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 360
Target Start/End: Complemental strand, 21815340 - 21815303
Alignment:
Q  323 tttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  21815340 tttcctaatcattattaaacatgttcagacactcaaaa 21815303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 358
Target Start/End: Complemental strand, 22633923 - 22633886
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaa 358  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  22633923 tctttcctaatcaatattagacatgttcaggcactcaa 22633886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 360
Target Start/End: Original strand, 32851868 - 32851901
Alignment:
Q  327 ctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||||||| |||||||||||||||    
T  32851868 ctaatcattattatacatattcaggcactcaaaa 32851901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 44102525 - 44102566
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggt 267  Q
    ||||||||||||| |||||| |||||||| ||||||||||||    
T  44102525 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggt 44102566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 51463952 - 51463872
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaac--ataattcatataatgtatatacaattatat 123  Q
    ||||| |||| |||||| |||||||||||||||| |||||| |||  ||  |||||||| |||||| ||||| ||||||||    
T  51463952 catgacataataatatcaaatgcaaatcaacaacgtctcaattattcacatataattcaaataatgcatatataattatat 51463872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 357
Target Start/End: Complemental strand, 53081840 - 53081771
Alignment:
Q  288 ttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactca 357  Q
    ||||||| |||||| |||||||| ||| |  || ||| | |||||||||||||||||||| |||||||||    
T  53081840 ttaaacttttccaggttcaatctcaatctaaaaacttgcttaatcattattatacatgtttaggcactca 53081771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 12287876 - 12287800
Alignment:
Q  288 ttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||| | |||| |||||||| ||| |  || ||| ||||||||||||||||||||||||| |||| | ||||||    
T  12287876 ttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcagacacttagaaacat 12287800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 14280394 - 14280438
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    ||||| |||| |||||| ||||||| |||||||||||||||||||    
T  14280394 catgacataataatatcaaatgcaagtcaacaacatctcaaatat 14280438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 44615366 - 44615453
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  44615366 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 44615453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 50222423 - 50222336
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  50222423 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 50222336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 54798793 - 54798749
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    ||||| |||| |||||| ||||||| |||||||||||||||||||    
T  54798793 catgacataataatatcaaatgcaagtcaacaacatctcaaatat 54798749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 122; Significance: 2e-62; HSPs: 2)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 5681 - 5877
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 100  Q
    |||||| |||||||||||| |||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5681 cttagtaaaataacaaacagcaacataggcagtatgaaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 5780  T
Q  101 atataatgtatatacaattatataacagtagcagcaacattagaatata-taattcaagtttactgaaacaacaacagcaaaataaataacttagttt 197  Q
    |||||||||||||||||||||||| || || || ||||||||||  ||| ||||||| | ||||||||||||||||| ||| ||||| ||||||||||    
T  5781 atataatgtatatacaattatataccattaacaacaacattagatcatattaattcaggcttactgaaacaacaacaacaagataaa-aacttagttt 5877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 285 - 364
Target Start/End: Original strand, 5968 - 6047
Alignment:
Q  285 ttcttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||||||||||||  |||||||| ||| |||||||||||||||||||||||| || |||||||||||||||||||||    
T  5968 ttcttaaactattccaagttcaatctcaatctccaatctttcctaatcattattagacctgttcaggcactcaaaaacat 6047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 122; Significance: 2e-62; HSPs: 2)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 2728 - 2527
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 100  Q
    ||||||||||||||||||| |||| |||| |||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2728 cttagttaaataacaaacatcaacataggcagtatgtaaatcatcatgttataacaatattgaatgcaaatcaacaacatctcaaatatcaacataattc 2629  T
Q  101 atataatgtatatacaattatataacagtagcagcaacattagaatata-taattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    |||||||||||||||||||||||| || || || ||||||||||  ||| ||||||| | |||||||||||||| |||||| ||||| |||||| |||||    
T  2628 atataatgtatatacaattatataccattaacaacaacattagatcatattaattcaggcttactgaaacaacatcagcaagataaacaacttaatttct 2529  T
Q  200 aa 201  Q
    ||    
T  2528 aa 2527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 198 - 364
Target Start/End: Complemental strand, 2477 - 2311
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaatt-cgttcttaaactat 296  Q
    |||||||||||||||||||||| || |  ||||||||| | |||||||||||||||| ||||||||||||  ||||| |  || | ||||||||| |||     
T  2477 ctaaacaaggcattctgtaactagtcaattcgcgaggcaatggcctctactcgccatggcgagttcaggtataactcccacaagtacgttcttaa-ctaa 2379  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||| |||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2378 tccaggttcaatctcaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacat 2311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 119; Significance: 1e-60; HSPs: 98)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 198 - 364
Target Start/End: Original strand, 15471212 - 15471378
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcgttcttaaactatt 297  Q
    |||||||| |||||||||||||||  || || ||||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||    
T  15471212 ctaaacaaagcattctgtaactgggcagttcacgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaattcgttcttaaactatt 15471311  T
Q  298 ccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    |||| |||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  15471312 ccaggttcaatcttaatctccaatctttcctaatcatcattatacatgttcagggactcaaaaacat 15471378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 15470962 - 15471162
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    ||||||||||||||| ||| |||| |||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||| |||||||||    
T  15470962 cttagttaaataacagacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatctcaaacatcaaacataatt 15471061  T
Q  100 catataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    ||| |||||||||||||||||||||||| || || |||| |||||  |||||||||| | ||||||||||||||||| ||| ||||| ||||||||||||    
T  15471062 catgtaatgtatatacaattatataacattaacaacaac-ttagatcatataattcaggcttactgaaacaacaacaacaagataaacaacttagtttct 15471160  T
Q  200 aa 201  Q
    ||    
T  15471161 aa 15471162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 14234525 - 14234728
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    |||||||||||||||| || |||| |||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||  ||| ||| |||||||||    
T  14234525 cttagttaaataacaagcagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatcataaacatcaaacataatt 14234624  T
Q  100 catataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactga--aacaacaacagcaaaataaataacttagttt 197  Q
    ||| |||||||||||||||||||||||| ||||| |||||||||| || | |||||| | |||||||  |||||||||| ||| ||||||||||||||||    
T  14234625 catgtaatgtatatacaattatataacattagcaacaacattagattaaacaattcaggcttactgaacaacaacaacaacaagataaataacttagttt 14234724  T
Q  198 ctaa 201  Q
    ||||    
T  14234725 ctaa 14234728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 198 - 364
Target Start/End: Complemental strand, 1465243 - 1465076
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactat 296  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||| |  ||||||||||||||| |||    
T  1465243 ctaaacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcaagttcaggtgcaactcacacaaattcgttcttaaattat 1465144  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||| |||||||| ||| | ||||||||| ||||||| || ||||| ||||||||||||||||||||    
T  1465143 tccaggttcaatctcaatctacaatctttcataatcatcatcatacaagttcaggcactcaaaaacat 1465076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 198 - 361
Target Start/End: Original strand, 14234778 - 14234941
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactat 296  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |  |||||| ||||| ||||||    
T  14234778 ctaaacaaggcattctgtaactggttagcttgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcccaaaaattcattctt-aactat 14234876  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaa 361  Q
    | | | |||||||| ||| |  |||||||||||||||| ||||||||||||||||||||||||||    
T  14234877 ttcgggttcaatctcaatctataatctttcctaatcatcattatacatgttcaggcactcaaaaa 14234941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 16097366 - 16097567
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    |||||||||||||||||||||||| |||| | ||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||| |||||||||    
T  16097366 cttagttaaataacaaacaacaacataggcaatatgcaaatcatcatcatataacaatatcgaatgcaagtcatcaacatctcaaatatcaaacataatt 16097465  T
Q  100 catataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    ||| |||||||||||||||||||||||| ||  | |||||| |    ||||   |||   |||||| |||||||||||||| ||||| ||||||||||||    
T  16097466 catgtaatgtatatacaattatataacattataaacaacatcaattcatatgcatcagtcttactggaacaacaacagcaagataaacaacttagtttct 16097565  T
Q  200 aa 201  Q
    ||    
T  16097566 aa 16097567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 32307715 - 32307830
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 100  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |    
T  32307715 cttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgc-aatcaacaacatctcaattatcaacataatcc 32307813  T
Q  101 atataatgtatatacaa 117  Q
    || ||||||||||||||    
T  32307814 atttaatgtatatacaa 32307830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 16103818 - 16103944
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    |||||||||| ||| |||| |||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  16103818 cttagttaaacaacgaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgc-aatcaacaacatctcaaatatcaaacataatt 16103916  T
Q  100 catataatgtatatacaattatataaca 127  Q
    ||| ||||||||||| ||||||||||||    
T  16103917 catttaatgtatataaaattatataaca 16103944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 12174342 - 12174218
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    ||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||   ||||||| |||||||||| ||||||| |    
T  12174342 cttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaa---aacaacaactcaaatatcaaacataagt 12174246  T
Q  100 catataatgtatatacaattatataaca 127  Q
    ||| ||||||||||||||||||||||||    
T  12174245 catgtaatgtatatacaattatataaca 12174218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 201 - 360
Target Start/End: Original strand, 324525 - 324685
Alignment:
Q  201 aacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactattc- 298  Q
    |||||||  |||||||||| | || ||||||||||||| |||||||||||| || ||||||||||||||||||| |  |||||| ||||||||||||||     
T  324525 aacaaggtgttctgtaacttggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgcaactcccaaaaattcattcttaaactattct 324624  T
Q  299 cagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||| |||||||| | | | ||||||||||||||||||||||||||| |||||||||||||||    
T  324625 cag-ttcaatctcattctacaatctttcctaatcattattatacatattcaggcactcaaaa 324685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 13210410 - 13210272
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    ||||||||||||||||| | |||| |||| |||||||||| ||||||||||||| ||||||||||||||||||||||   || ||||||| ||||||| |    
T  13210410 cttagttaaataacaaatagcaacataggcagtatgcaaaccatcatgatataataatatcgaatgcaaatcaacaa---cttaaatatcaaacataagt 13210314  T
Q  100 catataatgtatatacaattatataacagtagcagcaacatt 141  Q
    ||| |||||||||||||||||||||||| ||  |||||||||    
T  13210313 catgtaatgtatatacaattatataacattataagcaacatt 13210272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 1644756 - 1644642
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 100  Q
    |||||||||||||||| ||||||| |||| ||||||||||||||||| ||||||||||||||||| | ||||||||| ||||||| |||||||||||| |    
T  1644756 cttagttaaataacaa-caacaacataggcagtatgcaaatcatcattatataacaatatcgaatac-aatcaacaatatctcaattatcaacataatcc 1644659  T
Q  101 atataatgtatatacaa 117  Q
    || ||||||||||||||    
T  1644658 atttaatgtatatacaa 1644642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 49668159 - 49668044
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaac-aacatctcaaatatcaacataatt 99  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||  ||||||||||||     
T  49668159 cttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgc-aatcaacaaacatctcatttatcaacataatc 49668061  T
Q  100 catataatgtatataca 116  Q
    ||| ||| |||||||||    
T  49668060 catttaaagtatataca 49668044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 52523812 - 52523686
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatca--tcatgatataacaatatcgaatgcaaatcaacaacatctcaaata-tca-acata 96  Q
    |||||||||||||||||||||||| |||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||||||||| | ||| | |||    
T  52523812 cttagttaaataacaaacaacaacataggcagtatgcaaaacagttcatgatataacaatatcgaatgcaaatcaacaacatctcaaacattcatatata 52523713  T
Q  97 attcatataatgtatatacaattatat 123  Q
    |||||  ||||| ||||||||||||||    
T  52523712 attcaagtaatgcatatacaattatat 52523686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 199 - 364
Target Start/End: Original strand, 16097618 - 16097784
Alignment:
Q  199 taaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactatt 297  Q
    |||||||| |||| ||||||| |||||||||||||||||| |||||||||| |||| |||||||||||| ||| || |  |||||| |||| |||   ||    
T  16097618 taaacaagacattttgtaactagttagctcgcgaggcgagagcctctactcaccatggcgagttcaggtccaattcacaaaaattcattctaaaatcttt 16097717  T
Q  298 ccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
     ||| |||||||| | | |||||||||||||||| ||||||| |||||||||| |||||||||||||    
T  16097718 tcaggttcaatctcattctccaatctttcctaataattattagacatgttcagacactcaaaaacat 16097784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 70 - 201
Target Start/End: Complemental strand, 1465424 - 1465293
Alignment:
Q  70 atcaacaacatctcaaatatcaacataattcatataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaac 169  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| || || ||||||||||||| | ||| || | |||||| ||     
T  1465424 atcaacaacatctcaaatatcaacataattcatgtaatgtatatacaattgtataacattatcatcaacattagaataaacaatccaggcttactggaat 1465325  T
Q  170 aacaacagcaaaataaataacttagtttctaa 201  Q
     ||| || |||  |||||||||||||||||||    
T  1465324 gacagcatcaaggtaaataacttagtttctaa 1465293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 9512958 - 9513067
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 100  Q
    |||||||||| |||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||    | ||||||||||  |||||||||||| |    
T  9512958 cttagttaaacaacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgca----atcaacatctcatttatcaacataatcc 9513053  T
Q  101 atataatgtatata 114  Q
    || |||||||||||    
T  9513054 atttaatgtatata 9513067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 9520933 - 9521042
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 100  Q
    |||||||||| |||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||    | ||||||||||  |||||||||||| |    
T  9520933 cttagttaaacaacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgca----atcaacatctcatttatcaacataatcc 9521028  T
Q  101 atataatgtatata 114  Q
    || |||||||||||    
T  9521029 atttaatgtatata 9521042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 198 - 360
Target Start/End: Complemental strand, 52523560 - 52523398
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactat 296  Q
    ||||||||| ||||||||||||||  | ||||  |||||||||||||||||||| || ||||||||||||| ||||| |  |||| | |||||||||| |    
T  52523560 ctaaacaag-cattctgtaactgggcaactcgtcaggcgagggcctctactcgctatggcgagttcaggtgtaactcccaaaaatccattcttaaactgt 52523462  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||| |||||| | ||  |  ||||||||||||| ||||||| ||||||||||||||||||||    
T  52523461 tccaggttcaatatcaaactagaatctttcctaataattattacacatgttcaggcactcaaaa 52523398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 198 - 364
Target Start/End: Complemental strand, 2051032 - 2050868
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcg-ttcttaaactat 296  Q
    ||||||||| |||| |||||||||  | ||| ||||||||| |||||||||||| || | ||||||||||| ||||| | ||| ||  ||||||||||||    
T  2051032 ctaaacaag-cattttgtaactgggcaactcacgaggcgagagcctctactcgctatggagagttcaggtgtaactcccaaaaatccattcttaaactat 2050934  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||  | |||||||| ||| |  ||||||||||||||||||||| ||||||| ||||||||||||||||    
T  2050933 tc--ggttcaatctcaatctagaatctttcctaatcattattacacatgttgaggcactcaaaaacat 2050868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 37251251 - 37251051
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatca--tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataa 97  Q
    |||||||||  |||||||| |||| |||| |||||  ||| ||  |||||||||||||||||| ||||||||||||||||||||| || |||| | ||||    
T  37251251 cttagttaataaacaaacagcaacataggcagtatataaaacagttcatgatataacaatatcaaatgcaaatcaacaacatctc-aacatcataaataa 37251153  T
Q  98 ttcatataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagttt 197  Q
    ||||| ||||| ||||||| |||||| ||| ||  | |||||| | |  ||||||||||   |||||| ||||||||||| || ||||| ||||||||||    
T  37251152 ttcatgtaatgcatatacatttatatcacattattaacaacatcaaatcatataattcagacttactggaacaacaacagtaagataaacaacttagttt 37251053  T
Q  198 ct 199  Q
    ||    
T  37251052 ct 37251051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 196 - 364
Target Start/End: Complemental strand, 17248121 - 17247953
Alignment:
Q  196 ttctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaatt-cgttcttaaact 294  Q
    ||||||||||| |||||||||||||| |  ||||||||||||| |||||| |||||||| ||||||||||||   | || | || || | |||| |||      
T  17248121 ttctaaacaag-cattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatc 17248023  T
Q  295 attccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
     |||||| |||||||| | | | || ||||||||||||||||||| ||||||||||||||||||||||||    
T  17248022 tttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaaacat 17247953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 229 - 364
Target Start/End: Complemental strand, 49389446 - 49389311
Alignment:
Q  229 gcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcgttcttaaactat-tccagattcaatcttaatttccaatctttcc 327  Q
    ||||||||||  ||||| |||||||| |||||||||||| ||  || | |||||| |||| ||| | | ||||| |||||||| | | ||||||||||||    
T  49389446 gcgaggcgagaacctctgctcgccatggcgagttcaggttcagttcacaaaattcattct-aaagtctctccaggttcaatctcattctccaatctttcc 49389348  T
Q  328 taatcattattatacatgttcaggcactcaaaaacat 364  Q
    |||||||||||| ||||||||||||||||||||||||    
T  49389347 taatcattattagacatgttcaggcactcaaaaacat 49389311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 226 - 364
Target Start/End: Complemental strand, 1644488 - 1644350
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcgttcttaaactattc-cagattcaatcttaatttccaatctt 324  Q
    ||||||||||||| |||||| |||||||| |||||||||||| ||  || | |||||| |||| ||| | ||| ||| |||||||| | | || ||||||    
T  1644488 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttcacaaaattcattct-aaagtcttctcaggttcaatctcattctctaatctt 1644390  T
Q  325 tcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||||||||| | ||||||||||||||||||||||||    
T  1644389 tcctaatcattatcagacatgttcaggcactcaaaaacat 1644350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 226 - 364
Target Start/End: Complemental strand, 12934116 - 12933977
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaatt-cgttcttaaactattccagattcaatcttaatttccaatctt 324  Q
    ||||||||||||| | |||| |||||||| |||||||||||| ||  || | ||||| | |||| |||   |||||| |||||||| | | || ||||||    
T  12934116 ctcgcgaggcgagagtctctgctcgccatggcgagttcaggttcagttcacaaaatttcattctaaaatctttccaggttcaatctcattctctaatctt 12934017  T
Q  325 tcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  12934016 tcctaatcattattagacatgttcaggcactcaaaaacat 12933977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 226 - 360
Target Start/End: Original strand, 32307984 - 32308118
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcgttcttaaactattcc-agattcaatcttaatttccaatctt 324  Q
    ||||||||||||| |||||| |||||||| |||||||||||| ||  || | |||||| |||| ||| | |||| || |||||||| | | |||||||||    
T  32307984 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttcccaaaattcattct-aaagtcttcctaggttcaatctcattctccaatctt 32308082  T
Q  325 tcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||| | ||||||||||||||||||    
T  32308083 tcctaatcattattagatatgttcaggcactcaaaa 32308118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 267
Target Start/End: Complemental strand, 12171938 - 12171869
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggt 267  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||| || |||||||||    
T  12171938 ctaaacaaggcattctgtaactagttagatcgcgaggcgagagcctctactcgccatggccagttcaggt 12171869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 360
Target Start/End: Complemental strand, 53070531 - 53070370
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaa--ttcgttcttaaacta 295  Q
    ||||||||||| |||||||| |||  | ||||||||||||| ||||||||||||||| |||||||||||| || ||  | |||  ||| ||||| || ||    
T  53070531 ctaaacaaggc-ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgagttcaggt-cagcttccaaaaagttcattctt-aatta 53070435  T
Q  296 ttccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
     ||||| |||||||| | | | || ||||||||||||||||||| ||||||||||||||||||||    
T  53070434 atccaggttcaatctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaa 53070370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 23274725 - 23274813
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    ||||||||| |||||| || |||| |||| |||||||||| ||||||||||||| ||||||||| |||| | |||||||||||||||||    
T  23274725 cttagttaattaacaatcagcaacataggcagtatgcaaaacatcatgatataataatatcgaacgcaagtaaacaacatctcaaatat 23274813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 24340806 - 24340682
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaac--ataat 98  Q
    ||||||||| |||||| || |||| || | |||||||| | ||||||||||||| ||||||||| |||| | |||||||||||||||||  ||  |||||    
T  24340806 cttagttaattaacaatcagcaacatatgcagtatgcacaacatcatgatataataatatcgaacgcaagtaaacaacatctcaaatattcacatataat 24340707  T
Q  99 tcatataatgtatatacaattatat 123  Q
    |||  ||||| ||||||||||||||    
T  24340706 tcaagtaatgcatatacaattatat 24340682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 123
Target Start/End: Original strand, 43926041 - 43926121
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatat 123  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||| | | ||||||| ||||| ||||||| ||||||    
T  43926041 tcatgatataacaatatcaaatgcaaatcaacaacatctcaaacatcatatacaattcatgtaatgcatatacatttatat 43926121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 226 - 360
Target Start/End: Complemental strand, 49667889 - 49667754
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaatt-cgttcttaaactattccagattcaatcttaatttccaatctt 324  Q
    ||||||||||||| |||||| |||||||| |||||||||||| ||  || | | ||| | |||| |||   |||||| |||||||| | | || ||||||    
T  49667889 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttcacaatatttcattctaaaatctttccaggttcaatctcattctctaatctt 49667790  T
Q  325 tcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||| |||||||||||| |||||||    
T  49667789 tcctaatcattattagacatgttcaggcgctcaaaa 49667754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 2051259 - 2051158
Alignment:
Q  26 taggtagtatgcaaatca--tcatgatataacaatatcgaatgcaaatcaacaacatctcaaata-tca-acataattcatataatgtatatacaattat 121  Q
    |||| |||||||||| ||  |||||||||||||||||| |||||||||||||||||||||||| | ||| | ||||||||  ||||| ||||||||||||    
T  2051259 taggcagtatgcaaaacagttcatgatataacaatatcaaatgcaaatcaacaacatctcaaacattcatatataattcaagtaatgcatatacaattat 2051160  T
Q  122 at 123  Q
    ||    
T  2051159 at 2051158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 12171830 - 12171784
Alignment:
Q  318 caatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  12171830 caatctttcctaatcattattagacatgttcaggcactcaaaaacat 12171784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 53301634 - 53301545
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatca-acaacatctcaaatat 89  Q
    ||||||||||||||||||| |||| |||  |||||||||| || ||||||||||||||||| ||||||| |||  ||| |||||||||||    
T  53301634 cttagttaaataacaaacagcaacatagacagtatgcaaaacaacatgatataacaatatcaaatgcaagtcattcaatatctcaaatat 53301545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 316 - 364
Target Start/End: Original strand, 16104186 - 16104234
Alignment:
Q  316 tccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  16104186 tccaatctttcctaatcattattagacatgttcaggcactcagaaacat 16104234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 296 - 360
Target Start/End: Original strand, 18438920 - 18438984
Alignment:
Q  296 ttccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||| |||||||| | ||| || ||||||||||||||||||| ||||||||||||||||||||    
T  18438920 ttccaggttcaatctcattttacattctttcctaatcattattagacatgttcaggcactcaaaa 18438984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 27165285 - 27165373
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    ||||||||||||||||||| |||  |||  |||||||||| || ||||||||| ||||||| ||||||| ||| ||| |||||||||||    
T  27165285 cttagttaaataacaaacagcaatatagacagtatgcaaaacaacatgatataccaatatcaaatgcaagtcatcaatatctcaaatat 27165373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 363
Target Start/End: Original strand, 42386699 - 42386864
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaa--ttcgttcttaaacta 295  Q
    ||||||||||| |||||||| |||  | ||||||||| ||| ||||||||||||||| ||||||||||||  ||||| | |||  ||| ||||| |||||    
T  42386699 ctaaacaaggc-ttctgtaattgggcaactcgcgaggtgagagcctctactcgccatggcgagttcaggtataactcccaaaagtttcattctt-aacta 42386796  T
Q  296 ttccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaaca 363  Q
    || ||| |||||||  | | |  | |||| ||||||||||||||| |||||||| ||||||| |||||    
T  42386797 tttcaggttcaatcacagtctaaagtcttgcctaatcattattatgcatgttcatgcactcataaaca 42386864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 49389642 - 49389586
Alignment:
Q  72 caacaacatctcaaatatcaa-cataattcatataatgtatatacaattatataaca 127  Q
    |||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||    
T  49389642 caacaacatctcaactatcaaacataattcatttaatgtatatacaattatataaca 49389586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 359
Target Start/End: Original strand, 14572903 - 14573037
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaa---ttcgttcttaaactattccagattcaatcttaatttccaatc 322  Q
    ||||||||||||| ||||||||||||||| |||||||||||| ||  | || |||   ||| |||| |  || |||||| |||||||| | | | || ||    
T  14572903 ctcgcgaggcgagagcctctactcgccatggcgagttcaggt-cagatttccaaaggtttcattctaagtct-ttccaggttcaatctcattctacattc 14573000  T
Q  323 tttcctaatcattattatacatgttcaggcactcaaa 359  Q
    ||||||||||||||||| |||||||||||||||||||    
T  14573001 tttcctaatcattattagacatgttcaggcactcaaa 14573037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 326 - 364
Target Start/End: Complemental strand, 22109980 - 22109942
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22109980 cctaatcattattatacatgttcaggcactcaaaaacat 22109942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 360
Target Start/End: Original strand, 9513319 - 9513360
Alignment:
Q  319 aatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  9513319 aatctttcctaatcattattagacatgttcaggcactcaaaa 9513360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 360
Target Start/End: Original strand, 9521294 - 9521335
Alignment:
Q  319 aatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  9521294 aatctttcctaatcattattagacatgttcaggcactcaaaa 9521335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 199
Target Start/End: Complemental strand, 22110390 - 22110235
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatataacagtagcagcaacatta 142  Q
    |||||||||||||||||| |||||||||||||| |||||| || |||| | | ||||||| |||||  |||||| |||||| ||| ||  | |||| | |    
T  22110390 tcatgatataacaatatcaaatgcaaatcaacagcatctc-aacatcatatagaattcatgtaatgcgtatacatttatatcacattattaacaacttca 22110292  T
Q  143 gaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
     |  ||| |||||| | |||||||||||||||||| || ||||  ||||||||||||    
T  22110291 aatcatacaattcaggcttactgaaacaacaacagtaagataagcaacttagtttct 22110235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 123
Target Start/End: Complemental strand, 22147588 - 22147484
Alignment:
Q  21 caacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaat-atca-acataattcatataatgtatatacaat 118  Q
    |||||||||  ||||||||| ||||||||||||| ||||||| | | || | ||||||||||||||| |||| | ||||||||  ||||| |||||||||    
T  22147588 caacgtaggcggtatgcaaaacatcatgatataataatatcgcacgtaagtaaacaacatctcaaataatcacatataattcaagtaatgcatatacaat 22147489  T
Q  119 tatat 123  Q
    |||||    
T  22147488 tatat 22147484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 21 - 123
Target Start/End: Complemental strand, 37642328 - 37642224
Alignment:
Q  21 caacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaat-atca-acataattcatataatgtatatacaat 118  Q
    |||| |||| |||||||||| ||||||||||||| ||||||| | | || | ||||||||||||||| |||| | ||||||||  ||||| |||||||||    
T  37642328 caacataggcagtatgcaaaacatcatgatataataatatcgcacgtaagtaaacaacatctcaaataatcacatataattcaagtaatgcatatacaat 37642229  T
Q  119 tatat 123  Q
    |||||    
T  37642228 tatat 37642224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 42386449 - 42386536
Alignment:
Q  2 ttagttaaataacaaacaacaacgtaggtagtatgcaaat-catcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    ||||||||||||||| || |||| |||| ||||| ||||  || ||||| ||||||||||| ||||||| |||||||||||||||||||    
T  42386449 ttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgacataacaatatcaaatgcaagtcaacaacatctcaaatat 42386536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 14179733 - 14179772
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  14179733 tctttcctaatcattattagacatgttcaggcactcaaaa 14179772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 265
Target Start/End: Original strand, 14665893 - 14665960
Alignment:
Q  198 ctaaacaaggcattctgtaa--ctggttagctcgcgaggcgagggcctctactcgccattgcgagttcag 265  Q
    ||||||||||||||||||||  || ||  |||||||||||||| |||||| |||||||||||||||||||    
T  14665893 ctaaacaaggcattctgtaatactagt--gctcgcgaggcgagagcctctgctcgccattgcgagttcag 14665960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 265
Target Start/End: Original strand, 14735406 - 14735473
Alignment:
Q  198 ctaaacaaggcattctgtaa--ctggttagctcgcgaggcgagggcctctactcgccattgcgagttcag 265  Q
    ||||||||||||||||||||  || ||  |||||||||||||| |||||| |||||||||||||||||||    
T  14735406 ctaaacaaggcattctgtaatactagt--gctcgcgaggcgagagcctctgctcgccattgcgagttcag 14735473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 14973265 - 14973304
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  14973265 tctttcctaatcattattagacatgttcaggcactcaaaa 14973304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 17247230 - 17247187
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||||||||||||||| |||||||| |||||||||||||||    
T  17247230 tctttcctaatcattattagacatgttccggcactcaaaaacat 17247187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 40213431 - 40213392
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  40213431 tctttcctaatcattattagacatgttcaggcactcaaaa 40213392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 364
Target Start/End: Original strand, 316612 - 316650
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  316612 cctaatcattattatacatattcaggcactcaaaaacat 316650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 17488268 - 17488306
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaa 359  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  17488268 tctttcctaatcattattagacatgttcaggcactcaaa 17488306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 17499750 - 17499788
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaa 359  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  17499750 tctttcctaatcattattagacatgttcaggcactcaaa 17499788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 264
Target Start/End: Complemental strand, 606176 - 606135
Alignment:
Q  223 tagctcgcgaggcgagggcctctactcgccattgcgagttca 264  Q
    ||||||||||||||||| |||||||||||||| |||||||||    
T  606176 tagctcgcgaggcgaggacctctactcgccatggcgagttca 606135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 323 - 360
Target Start/End: Complemental strand, 11424471 - 11424434
Alignment:
Q  323 tttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  11424471 tttcctaatcattattagacatgttcaggcactcaaaa 11424434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 12399247 - 12399335
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaa-tcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    |||||||||||||||| || |||| |||| ||||| |||| ||| ||||| |||| |||||| ||||||| |||||||||||| ||||||    
T  12399247 cttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaaatgcaattcaacaacatcttaaatat 12399335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 323 - 360
Target Start/End: Original strand, 12399608 - 12399645
Alignment:
Q  323 tttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  12399608 tttcctaatcattattagacatgttcaggcactcaaaa 12399645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 13210161 - 13210096
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttc 263  Q
    |||||||||||||||||||||      |||||||||||||| ||||||||||||||| ||||||||    
T  13210161 ctaaacaaggcattctgtaacacaagtgctcgcgaggcgagagcctctactcgccatggcgagttc 13210096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 323 - 360
Target Start/End: Original strand, 13442687 - 13442724
Alignment:
Q  323 tttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  13442687 tttcctaatcattattagacatgttcaggcactcaaaa 13442724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 37250997 - 37250932
Alignment:
Q  201 aacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcagg 266  Q
    |||||||  ||||||||||||  | ||||||||||||| |||||||||||| || |||||||||||    
T  37250997 aacaaggtgttctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcagg 37250932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 327 - 360
Target Start/End: Original strand, 43927597 - 43927630
Alignment:
Q  327 ctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||||||||||||||||||    
T  43927597 ctaatcattattatacatgttcaggcactcaaaa 43927630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 359
Target Start/End: Original strand, 9578087 - 9578127
Alignment:
Q  319 aatctttcctaatcattattatacatgttcaggcactcaaa 359  Q
    |||||| |||||||||||| |||||||||||||||||||||    
T  9578087 aatcttgcctaatcattatcatacatgttcaggcactcaaa 9578127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 89
Target Start/End: Complemental strand, 24153272 - 24153204
Alignment:
Q  21 caacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    |||| |||||||||| |||| || ||||| |||| |||||| ||||||| |||||||||||| ||||||    
T  24153272 caacataggtagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatat 24153204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 79
Target Start/End: Original strand, 12378004 - 12378039
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaaca 79  Q
    |||||||||||||||||| |||||||||||||||||    
T  12378004 tcatgatataacaatatcaaatgcaaatcaacaaca 12378039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 20698157 - 20698118
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| |||||||||| |||||||||    
T  20698157 tctttcctaatcattattagacatgttcagacactcaaaa 20698118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 25476095 - 25476052
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    |||||| |||||||||||| ||||||||||| ||||||||||||    
T  25476095 tctttcataatcattattagacatgttcaggtactcaaaaacat 25476052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 26687298 - 26687337
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||| ||||||||||||    
T  26687298 tctttcctaatcattattagacatgtttaggcactcaaaa 26687337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 43842589 - 43842628
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||| ||||||||||||||    
T  43842589 tctttcctaatcattattagacatgctcaggcactcaaaa 43842628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 4588525 - 4588487
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaa 359  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  4588525 tctttcctaatcaatattagacatgttcaggcactcaaa 4588487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 267
Target Start/End: Complemental strand, 11424570 - 11424528
Alignment:
Q  225 gctcgcgaggcgagggcctctactcgccattgcgagttcaggt 267  Q
    |||||||||||||| ||||||||||||| | ||||||||||||    
T  11424570 gctcgcgaggcgagagcctctactcgccgtggcgagttcaggt 11424528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 12340163 - 12340201
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaa 359  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  12340163 tctttcctaatcaatattagacatgttcaggcactcaaa 12340201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 358
Target Start/End: Complemental strand, 12852099 - 12852037
Alignment:
Q  296 ttccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaa 358  Q
    ||||||||||||||| |   | || ||||||||||||| ||||| ||||||||||||||||||    
T  12852099 ttccagattcaatctcatcctacattctttcctaatcaatattagacatgttcaggcactcaa 12852037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 360
Target Start/End: Original strand, 14501615 - 14501649
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| |||||||||||||||    
T  14501615 cctaatcattattatacatattcaggcactcaaaa 14501649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 17672661 - 17672784
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaat-catcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaac--ataa 97  Q
    |||||||||||||||| ||||||| |||  ||||| ||||  || ||||| |||| |||||| |||||||||||||||| |||||| |||  ||  ||||    
T  17672661 cttagttaaataacaa-caacaacatagc-agtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacgtctcaattattcacatataa 17672758  T
Q  98 ttcatataatgtatatacaattatat 123  Q
    |||| |||||| ||||| ||||||||    
T  17672759 ttcaaataatgcatatataattatat 17672784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 18438572 - 18438653
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaat-catcatgatataacaatatcgaatgcaaatcaacaacatct 82  Q
    |||||||||||||||| || |||| |||| ||||| ||||  || |||||||||| |||||| ||||||| ||||||||||||    
T  18438572 cttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgatataataatatcaaatgcaagtcaacaacatct 18438653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 21618512 - 21618570
Alignment:
Q  31 agtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    ||||| |||| || ||||| |||| |||||| ||||||| |||||||||||||||||||    
T  21618512 agtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatat 21618570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 266
Target Start/End: Complemental strand, 22110158 - 22110116
Alignment:
Q  224 agctcgcgaggcgagggcctctactcgccattgcgagttcagg 266  Q
    ||||||||||||||| |||||||||||| || |||||||||||    
T  22110158 agctcgcgaggcgagagcctctactcgctatggcgagttcagg 22110116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 360
Target Start/End: Original strand, 23275157 - 23275191
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| |||||||||||||||    
T  23275157 cctaatcattattatacatattcaggcactcaaaa 23275191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 36166661 - 36166719
Alignment:
Q  31 agtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    ||||| |||| || ||||| |||| |||||| ||||||| |||||||||||||||||||    
T  36166661 agtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatat 36166719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 360
Target Start/End: Original strand, 45797659 - 45797693
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| |||||||||||||||    
T  45797659 cctaatcattattatacatattcaggcactcaaaa 45797693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 606364 - 606324
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaa 85  Q
    |||||||||||||||||| ||||||| |||||||||||||||    
T  606364 tcatgatataacaatatc-aatgcaattcaacaacatctcaa 606324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 7781431 - 7781351
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaac--ataattcatataatgtatatacaattatat 123  Q
    ||||| |||| |||||| |||||||||||||||| |||||| |||  ||  ||||||||  ||||| ||||||||||||||    
T  7781431 catgacataataatatcaaatgcaaatcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatat 7781351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 14972892 - 14972980
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaat-catcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    |||||||||||||||| || ||||  ||| ||||| ||||  || ||||| |||| |||||| |||||||||||||||||||||| ||||    
T  14972892 cttagttaaataacaa-cagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaaatcaacaacatctcatatat 14972980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 16103977 - 16104018
Alignment:
Q  160 ttactgaaacaacaacagcaaaataaataacttagtttctaa 201  Q
    |||||| |||||||||||||| ||||| ||||||||||||||    
T  16103977 ttactggaacaacaacagcaagataaacaacttagtttctaa 16104018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 123
Target Start/End: Complemental strand, 43550562 - 43550482
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatat 123  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||||||||||||||||||    
T  43550562 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgtatatacaattatat 43550482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 360
Target Start/End: Complemental strand, 606034 - 605962
Alignment:
Q  288 ttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||| |||||| |||||||| ||| |  ||  || ||||||||||||||||||  |||||||||||||||    
T  606034 ttaaacttttccaggttcaatctcaatctagaaaattgcctaatcattattatacacattcaggcactcaaaa 605962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 5223388 - 5223464
Alignment:
Q  48 gatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatat 123  Q
    |||||||||||||| ||||  ||||||||||| || ||| |||| | |||||||| |||||| |||||||| |||||    
T  5223388 gatataacaatatcaaatgataatcaacaacaacttaaacatcatatataattcacataatgcatatacaaatatat 5223464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 12340067 - 12340107
Alignment:
Q  225 gctcgcgaggcgagggcctctactcgccattgcgagttcag 265  Q
    |||||||||||||| |||||| |||||||| ||||||||||    
T  12340067 gctcgcgaggcgagagcctctgctcgccatggcgagttcag 12340107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 13151874 - 13151787
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  13151874 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 13151787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 13154339 - 13154252
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  13154339 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 13154252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 16454365 - 16454278
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  16454365 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 16454278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 34159404 - 34159491
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  34159404 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 34159491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 43927318 - 43927370
Alignment:
Q  147 atataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    |||||||||| | |||||||||||||||||| || ||||  ||||||||||||    
T  43927318 atataattcaggcttactgaaacaacaacagtaagataagcaacttagtttct 43927370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 55476569 - 55476656
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  55476569 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 55476656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 118; Significance: 4e-60; HSPs: 2)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 1117 - 917
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||| ||| |||||||  ||| ||| |||||||||    
T  1117 cttagttaaataacaaacaacaacataggtagtatgcagatcatcatgatataacaacatcgaatgcaagtcatcaacatcataaacatcaaacataatt 1018  T
Q  100 catataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    ||| |||||||||||||||||||||||| ||||| ||||||||| || || |||||| | ||||||||||||||||| ||| ||||||||||||||||||    
T  1017 catgtaatgtatatacaattatataacattagcaacaacattag-atttacaattcaggcttactgaaacaacaacaacaagataaataacttagtttct 919  T
Q  200 aa 201  Q
    ||    
T  918 aa 917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 198 - 364
Target Start/End: Complemental strand, 867 - 695
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcgttcttaaactatt 297  Q
    |||||||||||||| ||||||||| ||  ||||||||||||||||||||||||| |  ||||||||||||||||||| | |||| | | |||||||||||    
T  867 ctaaacaaggcattatgtaactgggtaattcgcgaggcgagggcctctactcgctaaggcgagttcaggtgcaactcacaaaatccatccttaaactatt 768  T
Q  298 ccagattcaatcttaatttc------caatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
     ||| |||||||| ||| ||      |||||||||||||||||||||||||||||||||||||||||||||||    
T  767 acaggttcaatctcaatctcaatctacaatctttcctaatcattattatacatgttcaggcactcaaaaacat 695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 114; Significance: 9e-58; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 6206 - 6009
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaa-cataatt 99  Q
    |||||||||||||||||||  ||| |||| ||||||||||||||||||||||||||||||||||||||| |||  ||||||  ||| ||||| |||||||    
T  6206 cttagttaaataacaaacagtaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcattaacatcataaacatcaaacataatt 6107  T
Q  100 catataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagttt 197  Q
    ||| |||||||||||||||||||||||| ||||| |||||||||| |||| |||||| | |||||||||||| |||||||| ||||||||||||||||    
T  6106 catgtaatgtatatacaattatataacattagcaacaacattagattatacaattcaggcttactgaaacaataacagcaagataaataacttagttt 6009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 198 - 364
Target Start/End: Complemental strand, 5955 - 5789
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcgttcttaaactatt 297  Q
    |||||||||||||| ||||||||| ||  ||||||||||||||||||||||||| |  |||||||||||||||| || | |||| | | |||||||||||    
T  5955 ctaaacaaggcattatgtaactgggtaattcgcgaggcgagggcctctactcgctaaggcgagttcaggtgcaaatcacaaaatccatccttaaactatt 5856  T
Q  298 ccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
     | | |||||||| ||| | |||| ||||||||||||||||||||||||||||| ||||||||||||    
T  5855 actggttcaatctcaatctacaatttttcctaatcattattatacatgttcaggtactcaaaaacat 5789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 1e-56; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 21329580 - 21329381
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaa-cataatt 99  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||||| ||||||||||||||||| ||| ||| |||||||  ||| ||||| |||||||    
T  21329580 cttagttaaataacaaacagcaacataggcagtatgcaaatcatcataatataacaatatcgaattcaagtcatcaacatcataaacatcaaacataatt 21329481  T
Q  100 catataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    ||| |||||||||||||||||||||||| ||||| |||||||||| |||| |||||| | ||||||||||||||||| ||| ||||| ||||||||||||    
T  21329480 catgtaatgtatatacaattatataacattagcaacaacattagattatacaattcaggcttactgaaacaacaacaacaagataaacaacttagtttct 21329381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 198 - 364
Target Start/End: Complemental strand, 5889009 - 5888842
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaa-attcgttcttaaactat 296  Q
    |||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||| | || |||| ||||||||||||    
T  5889009 ctaaacaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcacaaagattcattcttaaactat 5888910  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||  |||||||| ||| | ||||||||||||||||| || ||||| ||||||||||||||||||||    
T  5888909 tccatgttcaatctcaatctacaatctttcctaatcatcatcatacaagttcaggcactcaaaaacat 5888842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 198 - 361
Target Start/End: Complemental strand, 21741377 - 21741213
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactat 296  Q
    ||||||||| |||| |||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||    
T  21741377 ctaaacaagacattatgtaactggttagctcacgaggcgagagcctctactcgccatggcgagttcaggtgcaactcacataaattcgttcttaaactat 21741278  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaa 361  Q
    ||||| |||||||| ||| |  ||||||||||| |||| || ||||| |||||||||||||||||    
T  21741277 tccaggttcaatctcaatctataatctttcctattcatcatcatacaagttcaggcactcaaaaa 21741213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 21502239 - 21502041
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    |||||||||  |||||||| |||| |||| |||||| |||||| ||||||||||||||||||||||||| ||| || ||||| ||| ||| |||||||||    
T  21502239 cttagttaataaacaaacagcaacataggcagtatgtaaatcagcatgatataacaatatcgaatgcaagtcatcatcatcttaaacatcaaacataatt 21502140  T
Q  100 catataatgtatatacaattatataacagtagcagcaacattagaatata-taattcaagtttactgaaacaacaacagcaaaataaataacttagttt 197  Q
    ||| |||||||||||||||||||||||| || || ||||||||||  ||| ||||||| | ||||||||||||||||||||| ||||| ||||||||||    
T  21502139 catgtaatgtatatacaattatataacattaacaacaacattagatcatattaattcaggcttactgaaacaacaacagcaagataaacaacttagttt 21502041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 26012118 - 26011917
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaa-cataatt 99  Q
    |||||||||  |||||||| |||| |||| |||||||||| || ||||||||||||||||| ||||  |||||||||||||||||| ||||| |||||||    
T  26012118 cttagttaataaacaaacagcaacataggcagtatgcaaagcaacatgatataacaatatcaaatgtgaatcaacaacatctcaaacatcaaacataatt 26012019  T
Q  100 catataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    ||| ||||||||||||||||||||||||  | || |||||| ||| |||||| |||| | ||||||||||||||| | ||| ||||| ||||||||||||    
T  26012018 catgtaatgtatatacaattatataacatcaacaacaacatcagattatatagttcaggcttactgaaacaacaataacaagataaacaacttagtttct 26011919  T
Q  200 aa 201  Q
    ||    
T  26011918 aa 26011917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 21565580 - 21565707
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    ||||||||||||||||| | |||| |||| ||||| ||||||||||||||||||||||||||||||||| ||| |||||| ||||||||| |||||||||    
T  21565580 cttagttaaataacaaatagcaacataggcagtatccaaatcatcatgatataacaatatcgaatgcaagtcatcaacatttcaaatatcaaacataatt 21565679  T
Q  100 catataatgtatatacaattatataaca 127  Q
    ||| ||||||||||||||||||||||||    
T  21565680 catgtaatgtatatacaattatataaca 21565707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 22959615 - 22959491
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    ||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||   |||||||||| ||||||| |    
T  22959615 cttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatattgaatgcaaatcaacaa---ctcaaatatcaaacataagt 22959519  T
Q  100 catataatgtatatacaattatataaca 127  Q
    ||| ||||||||||||||||||||||||    
T  22959518 catgtaatgtatatacaattatataaca 22959491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 198 - 364
Target Start/End: Complemental strand, 22959367 - 22959200
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactat 296  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||| ||  || |  |||||| ||| |||| | |    
T  22959367 ctaaacaaggcattctgtaactagttagctcgcgaggcgagagcctctactcgccatggcgagttcaggttcagttcacaaaaattcattc-taaagtct 22959269  T
Q  297 -tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
     ||||| |||||||| | | |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22959268 ctccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacat 22959200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 20027024 - 20026824
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatca--tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaa-cataa 97  Q
    ||||||||||||||||||| |||| |||| ||||| |||| ||  ||||||||||| |||||| ||||||| ||||||||||| |||  ||||| |||||    
T  20027024 cttagttaaataacaaacagcaacataggcagtatccaaaacagttcatgatataataatatcaaatgcaattcaacaacatcacaac-atcaaacataa 20026926  T
Q  98 ttcatataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagttt 197  Q
    ||||| |||||||||||||| |||||| || || || |||||||| || |||||||||| | ||||||||||||| ||| ||| ||||| ||||||||||    
T  20026925 ttcatgtaatgtatatacaactatatagcattatcaacaacattaaaacatataattcaggcttactgaaacaactacaacaagataaacaacttagttt 20026826  T
Q  198 ct 199  Q
    ||    
T  20026825 ct 20026824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 199 - 364
Target Start/End: Original strand, 21565832 - 21565998
Alignment:
Q  199 taaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaa-ttcgttcttaaactatt 297  Q
    |||||||| |||||||||||| |||||||| ||||||||| |||||| |||||||| |||||||||||| ||| || | ||| ||| |||| |||   ||    
T  21565832 taaacaagtcattctgtaactagttagctcacgaggcgagagcctctgctcgccatggcgagttcaggtacaattcacgaaaattcattctaaaatcttt 21565931  T
Q  298 ccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    |||| |||||||| | | |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21565932 ccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacat 21565998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 19668939 - 19669060
Alignment:
Q  4 agttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataattcat 102  Q
    ||||||||||||||||||||| |||  ||||||||||||||| |||||||||||||||||||||||||||||||   |||||||||| ||||||| || |    
T  19668939 agttaaataacaaacaacaacatagacagtatgcaaatcatcgtgatataacaatatcgaatgcaaatcaacaa---ctcaaatatcaaacataagtcct 19669035  T
Q  103 ataatgtatatacaattatataaca 127  Q
     ||||||||||||||||||||||||    
T  19669036 gtaatgtatatacaattatataaca 19669060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 198 - 364
Target Start/End: Complemental strand, 21329329 - 21329162
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactat 296  Q
    |||||||||||||||||||||| | ||  |||||||||||| |||||||||||| || ||||||||| ||||||||| |  |||||| ||| |||| |||    
T  21329329 ctaaacaaggcattctgtaactaggtaattcgcgaggcgagagcctctactcgctatggcgagttcaagtgcaactcccaaaaattcattcctaaattat 21329230  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||| |||||||| ||| |  ||||||| |||||||| | || ||||||||||||||||||||||||    
T  21329229 tccaggttcaatctcaatctagaatcttttctaatcataactagacatgttcaggcactcaaaaacat 21329162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 198 - 360
Target Start/End: Original strand, 22144338 - 22144500
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcg-ttcttaaactat 296  Q
    ||||||||| ||||||||||||||  | ||||||||||||| |||||||||||| || ||||||||||||| ||||| | ||| ||  |||||||| |||    
T  22144338 ctaaacaag-cattctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaactcccaaaaatccattcttaaattat 22144436  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||| |||||||| ||| |  ||||||||||||||||| ||| ||||||||||||||||||||    
T  22144437 tccaggttcaatctcaatctagaatctttcctaatcattgttacacatgttcaggcactcaaaa 22144500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 201 - 357
Target Start/End: Complemental strand, 26011865 - 26011708
Alignment:
Q  201 aacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactattcc 299  Q
    ||||| ||||||||||||| |  | |||||||||||| |||||||||||||||| ||||||||||||| ||||| |  |||| | |||||||||||||||    
T  26011865 aacaaagcattctgtaactagacaactcgcgaggcgaaggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattcc 26011766  T
Q  300 agattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactca 357  Q
    || |||||||| |||||  |||||||| |||||||||||| ||||||| || ||||||    
T  26011765 aggttcaatctcaatttagaatctttcttaatcattattacacatgtttagacactca 26011708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 22178304 - 22178103
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatca--tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataa 97  Q
    |||||||||  ||||||||||||| |||| |||||  ||| ||  ||||||||| |||||||| |||||||||||||||||||||||| |||| | ||||    
T  22178304 cttagttaataaacaaacaacaacataggcagtatataaaacagctcatgatatgacaatatcaaatgcaaatcaacaacatctcaaacatcatatataa 22178205  T
Q  98 ttcatataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagttt 197  Q
    ||||| ||||| ||||||| |||||| ||| ||  | ||||||   |  |||||||| | |||||||||||||||||||| || ||||  ||||||||||    
T  22178204 ttcatgtaatgcatatacatttatatcacattattaacaacatccaatcatataatttaggtttactgaaacaacaacagtaagataagcaacttagttt 22178105  T
Q  198 ct 199  Q
    ||    
T  22178104 ct 22178103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 198 - 364
Target Start/End: Original strand, 19669186 - 19669354
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc--taaattcgttcttaaacta 295  Q
    |||||||||||||||||||||| ||||||| | |||||||| |||||||| |||||| |||||||||||| ||| || |   |||||| |||| ||        
T  19669186 ctaaacaaggcattctgtaactagttagctggtgaggcgagagcctctacacgccatggcgagttcaggtacaattcacaaaaaattcattctaaagtct 19669285  T
Q  296 ttccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    |||||  |||||||| | |  ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  19669286 ttccacgttcaatctcattccccaatctttcctaatcattattagacatgttcagacactcaaaaacat 19669354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 22144087 - 22144211
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaata-tca-acataat 98  Q
    ||||||||||||||| ||| |||| ||||||||||||||| || ||||||||||||||||| | |||||||||||||||||||||| | ||| | |||||    
T  22144087 cttagttaaataacagacatcaacataggtagtatgcaaaacaacatgatataacaatatcaattgcaaatcaacaacatctcaaacattcatatataat 22144186  T
Q  99 tcatataatgtatatacaattatat 123  Q
    |||  ||||| ||||||||||||||    
T  22144187 tcaagtaatgcatatacaattatat 22144211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 127
Target Start/End: Complemental strand, 21741546 - 21741489
Alignment:
Q  70 atcaacaacatctcaaatatcaacataattcatataatgtatatacaattatataaca 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21741546 atcaacaacatctcaaatatcaacataattcatataatgtatatacaattatataaca 21741489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 19660918 - 19660779
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    ||||||||||||||||||| |||| |||| |||||||||| |||| ||||||||  |||||||||  ||||||||||   ||||| |||| ||| ||| |    
T  19660918 cttagttaaataacaaacagcaacataggcagtatgcaaaccatcttgatataatgatatcgaatataaatcaacaa---ctcaattatcaaacttaagt 19660822  T
Q  100 catataatgtatatacaattatataacagtagcagcaacatta 142  Q
    ||| |||||||||||||||||||||||| ||  ||||||||||    
T  19660821 catgtaatgtatatacaattatataacattataagcaacatta 19660779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 285 - 364
Target Start/End: Complemental strand, 21498763 - 21498684
Alignment:
Q  285 ttcttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||| ||||||||||| |||||||| ||| | |||||| ||||||| ||||||||||||||||||||||||||||||||    
T  21498763 ttcttcaactattccaggttcaatctcaatctacaatctctcctaataattattatacatgttcaggcactcaaaaacat 21498684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 36314615 - 36314678
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaa 64  Q
    ||||||||||||||||||| |||| ||||||||||||||| ||||||||||||| |||||||||    
T  36314615 cttagttaaataacaaacagcaacataggtagtatgcaaaccatcatgatataataatatcgaa 36314678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 29448085 - 29448159
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaa 117  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||| || |||||||| ||||| ||||||||    
T  29448085 tcatgatataacaatatcaaatgcaaatcaacaacatctcaaacatcatacgtaattcatgtaatgcatatacaa 29448159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 198 - 360
Target Start/End: Complemental strand, 11581078 - 11580916
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcg-ttcttaaa-cta 295  Q
    ||||||||| |||||||||| ||| |  ||||||||||||| |||||| |||||||| ||||||||||||   | |||| || ||   |||| ||| |||    
T  11581078 ctaaacaag-cattctgtaaatgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattctcaaagttttattctaaaatcta 11580980  T
Q  296 ttccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    | |||| |||||||| | | | || ||||||||||||||||||| ||||||||||||||||||||    
T  11580979 t-ccaggttcaatctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaa 11580916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 123
Target Start/End: Original strand, 40725911 - 40726015
Alignment:
Q  21 caacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaat-atca-acataattcatataatgtatatacaat 118  Q
    ||||||||| |||||||||| ||||||||||||| ||||||| | | || | ||||||||||||||| |||| | ||||||||  ||||| |||||||||    
T  40725911 caacgtaggcagtatgcaaagcatcatgatataataatatcgcacgtaagtaaacaacatctcaaataatcacatataattcaagtaatgcatatacaat 40726010  T
Q  119 tatat 123  Q
    |||||    
T  40726011 tatat 40726015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 360
Target Start/End: Original strand, 1096760 - 1096917
Alignment:
Q  204 aaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaa--ttcgttcttaaactattccag 301  Q
    ||||||||||||  |||| |  ||||||||||||| ||||||||||||| | |||||||||||| ||  | || |||  ||| ||||  ||   ||||||    
T  1096760 aaggcattctgtttctgggtcactcgcgaggcgagagcctctactcgccgtggcgagttcaggt-cagatttccaaaagttcattctgcaatctttccag 1096858  T
Q  302 attcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||| |   | || ||||||||||||||||||| ||||||||||||||||||||    
T  1096859 attcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaa 1096917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 21501984 - 21501918
Alignment:
Q  201 aacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtg 268  Q
    |||||||||||||| |||||| || ||||||||||||| |||||||||||| || |||||||||||||    
T  21501984 aacaaggcattctg-aactgggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggtg 21501918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 203 - 267
Target Start/End: Complemental strand, 21871400 - 21871336
Alignment:
Q  203 caaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggt 267  Q
    ||||||||||||||  ||||||||||||||| || | ||||||||||||||| |||||| |||||    
T  21871400 caaggcattctgtatttggttagctcgcgagccgggagcctctactcgccatggcgagtacaggt 21871336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 203 - 267
Target Start/End: Complemental strand, 21875680 - 21875616
Alignment:
Q  203 caaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggt 267  Q
    ||||||||||||||  ||||||||||||||| || | ||||||||||||||| |||||| |||||    
T  21875680 caaggcattctgtatttggttagctcgcgagccgggagcctctactcgccatggcgagtacaggt 21875616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 360
Target Start/End: Complemental strand, 21985882 - 21985818
Alignment:
Q  296 ttccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||| |||||||| | | | || ||||||||||||||||||| ||||||||||||||||||||    
T  21985882 ttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaa 21985818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22412222 - 22412309
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    |||||||||||||| |  |||||| |||| ||||| |||| || ||||| |||| |||||| ||||||| |||||||||||||||||||    
T  22412222 cttagttaaataacgat-aacaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatat 22412309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 226 - 360
Target Start/End: Complemental strand, 36154634 - 36154499
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaa-attcgttcttaaa-ctattccagattcaatcttaatttccaatct 323  Q
    ||||||||||||| ||||||||||||||| ||||||||||||   | |||| ||  ||  |||| ||| ||| ||||| |||||||| | | | || |||    
T  36154634 ctcgcgaggcgagagcctctactcgccatggcgagttcaggtcagattctcaaagttttattctaaaatcta-tccaggttcaatctcactctacattct 36154536  T
Q  324 ttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  36154535 ttcctaatcattattagacatgttcaagcactcaaaa 36154499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 19660547 - 19660508
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  19660547 tctttcctaatcattattagacatgttcaggcactcaaaa 19660508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 23390206 - 23390167
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  23390206 tctttcctaatcattattagacatgttcaggcactcaaaa 23390167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 360
Target Start/End: Complemental strand, 20026568 - 20026534
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||||||||||||||||||||||||    
T  20026568 cctaatcattattatacatgttcaggcactcaaaa 20026534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 1096505 - 1096593
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaat-catcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    |||||||||||||||| || ||||  ||||||||||||||  || ||| | |||| |||||| |||||||||||||||||||||| ||||    
T  1096505 cttagttaaataacaa-cagcaacacaggtagtatgcaaaaacaacataacataataatatcaaatgcaaatcaacaacatctcacatat 1096593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 323 - 360
Target Start/End: Original strand, 9078365 - 9078402
Alignment:
Q  323 tttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  9078365 tttcctaatcattattagacatgttcaggcactcaaaa 9078402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 21292691 - 21292652
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||| ||||||| ||||||||||||||||||||    
T  21292691 tctttcctaattattattagacatgttcaggcactcaaaa 21292652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 21871281 - 21871242
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  21871281 tctttcctaatcattaataaacatgttcaggcactcaaaa 21871242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 21875561 - 21875522
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  21875561 tctttcctaatcattaataaacatgttcaggcactcaaaa 21875522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 22075419 - 22075458
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||| |||||||||||||| ||||||||||||||||||||    
T  22075419 tcttacctaatcattattagacatgttcaggcactcaaaa 22075458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 265
Target Start/End: Complemental strand, 22120026 - 22119959
Alignment:
Q  198 ctaaacaaggcattctgtaa--ctggttagctcgcgaggcgagggcctctactcgccattgcgagttcag 265  Q
    ||||||||||||||||||||  || ||  |||||||||||||| |||||| |||||||| ||||||||||    
T  22120026 ctaaacaaggcattctgtaatactagt--gctcgcgaggcgagagcctctgctcgccatggcgagttcag 22119959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 24529632 - 24529671
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||| ||||    
T  24529632 tctttcctaatcattattagacatgttcaggcactgaaaa 24529671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 25421943 - 25421982
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  25421943 tctttcctaatcattaatagacatgttcaggcactcaaaa 25421982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 25431805 - 25431844
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  25431805 tctttcctaatcattaataaacatgttcaggcactcaaaa 25431844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 225 - 264
Target Start/End: Original strand, 25744035 - 25744074
Alignment:
Q  225 gctcgcgaggcgagggcctctactcgccattgcgagttca 264  Q
    |||||||||||||| ||||||||||||||| |||||||||    
T  25744035 gctcgcgaggcgagagcctctactcgccatggcgagttca 25744074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 89
Target Start/End: Complemental strand, 20766173 - 20766115
Alignment:
Q  31 agtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    ||||| |||| || ||||| |||| |||||| ||||||| |||||||||||||||||||    
T  20766173 agtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatat 20766115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 22107094 - 22107056
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaa 359  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  22107094 tctttcctaatcaatattagacatgttcaggcactcaaa 22107056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 22119903 - 22119865
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaa 359  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  22119903 tctttcctaatcaatattagacatgttcaggcactcaaa 22119865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 360
Target Start/End: Complemental strand, 22177848 - 22177814
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| |||||||||||||||    
T  22177848 cctaatcattattatacatattcaggcactcaaaa 22177814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 360
Target Start/End: Complemental strand, 26732463 - 26732429
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||| ||||||||||||||||||||||||    
T  26732463 cctaatcattcttatacatgttcaggcactcaaaa 26732429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 360
Target Start/End: Complemental strand, 26740276 - 26740242
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||| ||||||||||||||||||||||||    
T  26740276 cctaatcattcttatacatgttcaggcactcaaaa 26740242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 21729147 - 21729059
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaa-tcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    |||||||||||||||| || |||| |||| ||||| |||| ||| ||||| |||| |||||| | ||||| |||||||||||| ||||||    
T  21729147 cttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatcttaaatat 21729059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 21808472 - 21808384
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaa-tcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    |||||||||||||||| || |||| |||| ||||| |||| ||| ||||| |||| |||||| | ||||| |||||||||||| ||||||    
T  21808472 cttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatcttaaatat 21808384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22075057 - 22075145
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaa-tcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    |||||||||||||||| || |||| |||| ||||| |||| ||| ||||| |||| |||||| | ||||| |||||||||||| ||||||    
T  22075057 cttagttaaataacaa-cagcaacataggaagtatacaaaatcaacatgacataataatatcaattgcaattcaacaacatcttaaatat 22075145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 360
Target Start/End: Complemental strand, 25574097 - 25574064
Alignment:
Q  327 ctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||| ||||||||||||||||||||||||    
T  25574097 ctaatcattcttatacatgttcaggcactcaaaa 25574064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 360
Target Start/End: Complemental strand, 25575290 - 25575257
Alignment:
Q  327 ctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||| ||||||||||||||||||||||||    
T  25575290 ctaatcattcttatacatgttcaggcactcaaaa 25575257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 360
Target Start/End: Complemental strand, 25576483 - 25576450
Alignment:
Q  327 ctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||| ||||||||||||||||||||||||    
T  25576483 ctaatcattcttatacatgttcaggcactcaaaa 25576450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 252
Target Start/End: Original strand, 15796735 - 15796763
Alignment:
Q  224 agctcgcgaggcgagggcctctactcgcc 252  Q
    |||||||||||||||||||||||||||||    
T  15796735 agctcgcgaggcgagggcctctactcgcc 15796763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 20909090 - 20909177
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  20909090 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 20909177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 24493626 - 24493694
Alignment:
Q  21 caacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    |||| |||| ||||| |||| || ||||| |||| |||||| ||||||| |||||||||||| ||||||    
T  24493626 caacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatcttaaatat 24493694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 39363462 - 39363549
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  39363462 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 39363549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 42245449 - 42245362
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  42245449 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 42245362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1257 (Bit Score: 108; Significance: 4e-54; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 2283 - 2100
Alignment:
Q  19 aacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattcatataatgtatatacaat 118  Q
    |||||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2283 aacaacataggcagtatgcaaatcatcatgatataacaatatcaaatgcaaatcaacaacatctcaaatatcagcataattcatataatgtatatacaat 2184  T
Q  119 tatataacagtagcagcaacattagaatata-taattcaagtttactgaaacaacaacagcaaaataaataacttagtttctaa 201  Q
    |||||| || || || ||||||| ||  ||| ||| ||| | ||||||||||||||||||||| ||||| |||||| |||||||    
T  2183 tatataccattaacaacaacattggatcatattaaatcaggcttactgaaacaacaacagcaagataaacaacttattttctaa 2100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 106; Significance: 6e-53; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 12804 - 13005
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaa-cataatt 99  Q
    ||||| |||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||| ||| |||||||  ||| ||||| |||||||    
T  12804 cttagctaaataacaaacaacaacataggcaatatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatcataaacatcaaacataatt 12903  T
Q  100 catataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    ||| |||||||||||||||||||||||| ||  | ||||||||||  |||||||||| | |||||| |||||||||||||| |||||  |||||||||||    
T  12904 catgtaatgtatatacaattatataacattaataacaacattagatcatataattcaggcttactggaacaacaacagcaagataaaccacttagtttct 13003  T
Q  200 aa 201  Q
    ||    
T  13004 aa 13005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 363
Target Start/End: Original strand, 13259 - 13296
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaaaca 363  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  13259 cctaatcattatcatacatgttcaggcactcataaaca 13296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 106; Significance: 6e-53; HSPs: 4)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 6649 - 6850
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaa-cataatt 99  Q
    |||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||| | | || |||   ||| ||||| |||||||    
T  6649 cttagttaaataacaaacaacaacataggcagtatgcaaatcatgatgatataacaatatcgaatgcaagttatcatcattataaacatcaaacataatt 6748  T
Q  100 catataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    ||| |||||||||||||||||||||||| || || ||||||||||  |||||||||||| ||||| ||||||||||||||| ||||| ||||||| ||||    
T  6749 catgtaatgtatatacaattatataacattaacaacaacattagatcatataattcaagcttactaaaacaacaacagcaagataaacaacttagattct 6848  T
Q  200 aa 201  Q
    ||    
T  6849 aa 6850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 14029 - 14230
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaa-cataatt 99  Q
    |||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||| | | || |||   ||| ||||| |||||||    
T  14029 cttagttaaataacaaacaacaacataggcagtatgcaaatcatgatgatataacaatatcgaatgcaagttatcatcattataaacatcaaacataatt 14128  T
Q  100 catataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    ||| |||||||||||||||||||||||| || || ||||||||||  |||||||||||| ||||| ||||||||||||||| ||||| ||||||| ||||    
T  14129 catgtaatgtatatacaattatataacattaacaacaacattagatcatataattcaagcttactaaaacaacaacagcaagataaacaacttagattct 14228  T
Q  200 aa 201  Q
    ||    
T  14229 aa 14230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 198 - 364
Target Start/End: Original strand, 6900 - 7067
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcg-ttcttaaactat 296  Q
    |||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||| || || | ||| ||  ||||||||||||    
T  6900 ctaaacaatgcattctataactggttagcttgcgaggcgagggcctctactcgccatggcgagttcaggtgtaattcccaaaaatccattcttaaactat 6999  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||| |||||||||||| |  |||||||||||||||| |||||||||||| ||||||||||||||||    
T  7000 tccaggttcaatcttaatctataatctttcctaatcatcattatacatgtttaggcactcaaaaacat 7067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 198 - 364
Target Start/End: Original strand, 14280 - 14447
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcg-ttcttaaactat 296  Q
    |||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||| || || | ||| ||  ||||||||||||    
T  14280 ctaaacaatgcattctataactggttagcttgcgaggcgagggcctctactcgccatggcgagttcaggtgtaattcccaaaaatccattcttaaactat 14379  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||| |||||||||||| |  |||||||||||||||| |||||||||||| ||||||||||||||||    
T  14380 tccaggttcaatcttaatctataatctttcctaatcatcattatacatgtttaggcactcaaaaacat 14447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 106; Significance: 6e-53; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 14780 - 14579
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 100  Q
    ||||||||| ||||||||| |||| |||| |||| | ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  14780 cttagttaactaacaaacagcaacataggcagtaagaaaatcatcatgatatagtaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 14681  T
Q  101 atataatgtatatacaattatataacagtagcagcaacattagaatata-taattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    ||||||||||||||| |||||||| || || ||  |||||||||  ||| ||| ||| | ||||||||||||||||||||| ||| | ||||||||||||    
T  14680 atataatgtatatactattatataccattaacaaaaacattagatcatattaaatcaggcttactgaaacaacaacagcaagatatacaacttagtttct 14581  T
Q  200 aa 201  Q
    ||    
T  14580 aa 14579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 106; Significance: 6e-53; HSPs: 68)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 23019444 - 23019645
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaa-cataatt 99  Q
    |||||||||  |||||||| |||| || | |||||||||| || ||||||||||||||||| ||||||| |||||||||||||||| ||||| |||||||    
T  23019444 cttagttaataaacaaacagcaacataagcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcaacaacatctcaaacatcaaacataatt 23019543  T
Q  100 catataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    ||| |||||||||||||||||||||||| || || | |||||||| |||||| |||| | ||||||||||||||||||||| ||||| ||||||||||||    
T  23019544 catgtaatgtatatacaattatataacattaacaacgacattagattatatagttcaggcttactgaaacaacaacagcaagataaacaacttagtttct 23019643  T
Q  200 aa 201  Q
    ||    
T  23019644 aa 23019645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 19652233 - 19652358
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 100  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |    
T  19652233 cttagttaaacaacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaatgc-aatcaacaacatctcaaacatcaacataatcc 19652331  T
Q  101 atataatgtatatacaattatataaca 127  Q
    || ||| ||||||||||||||||||||    
T  19652332 atttaaagtatatacaattatataaca 19652358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 224 - 364
Target Start/End: Complemental strand, 22080545 - 22080404
Alignment:
Q  224 agctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactattccagattcaatcttaatttccaatc 322  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||  ||||| | ||| ||||||||||||||||||||| |||||||||||| || ||||    
T  22080545 agctcgcgaggcgagagcctctactcgccatggcgagttcaggtataactcccataagttcgttcttaaactattccaggttcaatcttaatctctaatc 22080446  T
Q  323 tttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||| ||||||||||||| |||||||||| |||||||||||||    
T  22080445 ttttctaatcattattagacatgttcagtcactcaaaaacat 22080404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 1561341 - 1561480
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    ||||||||||||||||| |||||  ||||||||||||||| ||||||||||||| ||||||||||||||||||||||   |||||||||| ||||||| |    
T  1561341 cttagttaaataacaaataacaatataggtagtatgcaaaccatcatgatataataatatcgaatgcaaatcaacaa---ctcaaatatcaaacataagt 1561437  T
Q  100 catataatgtatatacaattatataacagtagcagcaacatta 142  Q
    ||| |||||||||||||||||||||||| ||  ||||||||||    
T  1561438 catgtaatgtatatacaattatataacattataagcaacatta 1561480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 19668409 - 19668609
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatca--tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataa 97  Q
    ||||||||| ||||||||| |||| ||| ||||||||||| ||  |||||||||||||||||| ||||||||||||||||||| | || |||| || |||    
T  19668409 cttagttaattaacaaacagcaacatagatagtatgcaaaacagttcatgatataacaatatcaaatgcaaatcaacaacatcac-aacatcatacgtaa 19668507  T
Q  98 ttcatataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagttt 197  Q
    ||||| |||||||||||||| ||||||||| || || ||||| || |  |||||  |||   ||||||||||||||||||||| ||||| ||||||||||    
T  19668508 ttcatgtaatgtatatacaactatataacattatcaacaacactacatcatatacatcagacttactgaaacaacaacagcaagataaacaacttagttt 19668607  T
Q  198 ct 199  Q
    ||    
T  19668608 ct 19668609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 198 - 364
Target Start/End: Original strand, 19652482 - 19652649
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactat 296  Q
    |||||||||| ||| ||||||| |||||| ||||||||||| ||||||||||||||| |||||||||||| ||| || |  |||||| |||| ||    |    
T  19652482 ctaaacaaggtattttgtaactagttagcccgcgaggcgagagcctctactcgccatggcgagttcaggtacaattcacaaaaattcattctaaagtctt 19652581  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||| |||||||| | | | |||||||||||||||||||||| ||||||||||||||||||||||||    
T  19652582 tccaggttcaatctcattcttcaatctttcctaatcattattagacatgttcaggcactcaaaaacat 19652649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 226 - 360
Target Start/End: Original strand, 23019722 - 23019857
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaa-ttcgttcttaaactattccagattcaatcttaatttccaatctt 324  Q
    |||||||||| |||||||||||||||||| ||||||||||||| ||||| | ||| ||| |||||||| |||||||| |||||||| ||| |  ||||||    
T  23019722 ctcgcgaggcaagggcctctactcgccatggcgagttcaggtgtaactcccaaaaattcattcttaaaatattccaggttcaatctcaatctaaaatctt 23019821  T
Q  325 tcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||| | ||||||||||||||||||||    
T  23019822 tcctaatcattatcacacatgttcaggcactcaaaa 23019857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 26 - 201
Target Start/End: Complemental strand, 22080796 - 22080621
Alignment:
Q  26 taggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattcatataatgtatatacaattatataa 125  Q
    |||| |||||||||| ||||||||||||||||||||||||||| |  |||||||||||||| |||  ||||||| |||||||||||||||| ||||||||    
T  22080796 taggcagtatgcaaaacatcatgatataacaatatcgaatgcacag-aacaacatctcaaacatcgtcataattaatataatgtatatacatttatataa 22080698  T
Q  126 cagtagcagcaacattagaatatat-aattcaagtttactgaaacaacaacagcaaaataaataacttagtttctaa 201  Q
    || || || || ||||||   |||| |||| | | ||||||||||||||| ||||| ||||  ||||||||||||||    
T  22080697 cattaacaacatcattaggtcatatcaatttaggcttactgaaacaacaagagcaagataagcaacttagtttctaa 22080621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 28496554 - 28496415
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    ||||||||||||||||  | |||| |||| |||||||||| ||||||||||||| ||||||||||| ||||||||||   |||||||||| ||||||| |    
T  28496554 cttagttaaataacaattagcaacataggcagtatgcaaaccatcatgatataataatatcgaatgtaaatcaacaa---ctcaaatatcaaacataagt 28496458  T
Q  100 catataatgtatatacaattatataacagtagcagcaacatta 142  Q
    ||| |||||||||||||||||||||||| ||  ||||||||||    
T  28496457 catgtaatgtatatacaattatataacattataagcaacatta 28496415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 29808965 - 29808826
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    ||||||||||||||||  | |||| |||| |||||||||| ||||||||||||| ||||||||||| ||||||||||   |||||||||| ||||||| |    
T  29808965 cttagttaaataacaattagcaacataggcagtatgcaaaccatcatgatataataatatcgaatgtaaatcaacaa---ctcaaatatcaaacataagt 29808869  T
Q  100 catataatgtatatacaattatataacagtagcagcaacatta 142  Q
    ||| |||||||||||||||||||||||| ||  ||||||||||    
T  29808868 catgtaatgtatatacaattatataacattataagcaacatta 29808826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 201 - 360
Target Start/End: Complemental strand, 27333115 - 27332955
Alignment:
Q  201 aacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaa-ttcgttcttaaactattcc 299  Q
    ||||| ||||||||||| |||  || |||||||||||| ||||||||||||||| ||||||||||||||||||| | ||| ||| |||| |||   ||||    
T  27333115 aacaaagcattctgtaattgggcagttcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcacaaaacttcattctaaaatctttcc 27333016  T
Q  300 agattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    || ||||| || | | |  |||||||||||||||| ||||||||||||||| |||||||||    
T  27333015 aggttcaacctcattctaaaatctttcctaatcatcattatacatgttcagccactcaaaa 27332955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 201 - 360
Target Start/End: Complemental strand, 27393855 - 27393695
Alignment:
Q  201 aacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaa-ttcgttcttaaactattcc 299  Q
    ||||| ||||||||||| |||  || |||||||||||| ||||||||||||||| ||||||||||||||||||| | ||| ||| |||| |||   ||||    
T  27393855 aacaaagcattctgtaattgggcagttcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaactcacaaaacttcattctaaaatctttcc 27393756  T
Q  300 agattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    || ||||| || | | |  |||||||||||||||| ||||||||||||||| |||||||||    
T  27393755 aggttcaacctcattctaaaatctttcctaatcatcattatacatgttcagccactcaaaa 27393695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 226 - 364
Target Start/End: Original strand, 25644637 - 25644776
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcg-ttcttaaactattccagattcaatcttaatttccaatctt 324  Q
    |||||||||||||||||||||||||| || |||||||| |||| ||||| | ||| ||  ||||||||||||| ||| |||||||| ||| |  ||||||    
T  25644637 ctcgcgaggcgagggcctctactcgctatggcgagttcgggtgtaactcccaaaaatccattcttaaactatttcaggttcaatctcaatctaaaatctt 25644736  T
Q  325 tcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    |||||||||   |||||||||  |||||||||||||||||    
T  25644737 tcctaatcaacgttatacatgaacaggcactcaaaaacat 25644776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 203 - 360
Target Start/End: Complemental strand, 4668042 - 4667884
Alignment:
Q  203 caaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaact-attcca 300  Q
    ||||||||||||||| ||| |||||||||||||||| ||||||||||||||| |||||||||||| ||  || |  |||||| ||| ||||||  |||||    
T  4668042 caaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggttcagttcacaaaaattcattc-taaactctttcca 4667944  T
Q  301 gattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    | | |||||| | | | || |||||||||||| |||||| || |||||||||||||||||    
T  4667943 ggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaaaa 4667884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 27333301 - 27333238
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaa 64  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||    
T  27333301 cttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaa 27333238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 27394041 - 27393978
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaa 64  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||    
T  27394041 cttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaa 27393978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 9098597 - 9098469
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatca--tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaa-cataa 97  Q
    ||||||||||||||||||| ||||  ||| |||||||||| ||  |||||||||||||||||| ||||||  |||||||| || |||  ||||| |||||    
T  9098597 cttagttaaataacaaacagcaacaaaggcagtatgcaaaacaattcatgatataacaatatcaaatgcatttcaacaacttcacaac-atcaaacataa 9098499  T
Q  98 ttcatataatgtatatacaattatataaca 127  Q
    ||||| ||||||||||| ||||||||||||    
T  9098498 ttcatgtaatgtatatataattatataaca 9098469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 20109176 - 20109295
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaata-tca-acataat 98  Q
    |||||||||  |||||||| |||| |||| |||||||||| || ||| ||||||||||||| ||||||| ||| |||||||||||||| ||| | |||||    
T  20109176 cttagttaataaacaaacagcaacataggcagtatgcaaaacaacataatataacaatatcaaatgcaagtcatcaacatctcaaatattcatatataat 20109275  T
Q  99 tcatataatgtatatacaat 118  Q
    |||  |||||||||||||||    
T  20109276 tcaagtaatgtatatacaat 20109295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 203 - 267
Target Start/End: Complemental strand, 4185652 - 4185588
Alignment:
Q  203 caaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggt 267  Q
    ||||||||||| ||| ||| |||||||||||||||| ||||||||||||||| ||||||||||||    
T  4185652 caaggcattctataaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggt 4185588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 4185902 - 4185827
Alignment:
Q  3 tagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaac 78  Q
    |||||||| |||| ||| |||| |||| ||||||||| ||||||||||||||||||||||||||||| ||| ||||    
T  4185902 tagttaaacaacagacagcaacataggcagtatgcaactcatcatgatataacaatatcgaatgcaattcatcaac 4185827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 203 - 360
Target Start/End: Original strand, 4189248 - 4189406
Alignment:
Q  203 caaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaact-attcca 300  Q
    ||||||||||||||| ||| |||||||||||||||| |||||||||||||||  |||||| |||| ||  || |  |||||| ||| ||||||  |||||    
T  4189248 caaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatgacgagtttaggttcagttcacaaaaattcattc-taaactctttcca 4189346  T
Q  301 gattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    | | |||||| | | | || |||||||||||| |||||| || |||||||||||||||||    
T  4189347 ggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaaaa 4189406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 203 - 360
Target Start/End: Complemental strand, 4674889 - 4674731
Alignment:
Q  203 caaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaact-attcca 300  Q
    ||||||||||||||| ||| |||||||||||||||| |||||||||||||||  |||||| |||| ||  || |  |||||| ||| ||||||  |||||    
T  4674889 caaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatgacgagttaaggttcagttcacaaaaattcattc-taaactctttcca 4674791  T
Q  301 gattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    | | |||||| | | | || |||||||||||| |||||| || |||||||||||||||||    
T  4674790 ggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaaaa 4674731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 360
Target Start/End: Original strand, 18457006 - 18457164
Alignment:
Q  201 aacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaa--ttcgttcttaaactattc 298  Q
    |||||||| |||||||| |||  | ||||||||||||| ||||||||||||||| || ||||||||| || ||  | |||  ||| |||||||  || ||    
T  18457006 aacaaggc-ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggctagttcaggt-cagcttccaaaaagttcattcttaat-taatc 18457102  T
Q  299 cagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||| |||||||| | | | || ||||||||||||||||||| ||||||||||||||||||||    
T  18457103 caggttcaatctcattctacattctttcctaatcattattaaacatgttcaggcactcaaaa 18457164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 361
Target Start/End: Complemental strand, 25956429 - 25956291
Alignment:
Q  224 agctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcg-ttcttaaactattccagattcaatcttaatttccaatc 322  Q
    |||| |||||||||| ||||||||||||||| |||| | |||||| |||||   ||| ||  ||||||||||||||||| || ||||| ||| |  ||||    
T  25956429 agcttgcgaggcgagagcctctactcgccatggcgaatacaggtgtaactccaaaaaatccattcttaaactattccaggttaaatctcaatctagaatc 25956330  T
Q  323 tttcctaatcattattatacatgttcaggcactcaaaaa 361  Q
    ||| | |||| | |||| |||||||||||||||||||||    
T  25956329 ttttccaatcgtaattagacatgttcaggcactcaaaaa 25956291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 123
Target Start/End: Complemental strand, 8227574 - 8227470
Alignment:
Q  21 caacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaat-atca-acataattcatataatgtatatacaat 118  Q
    ||||||||| |||||||||| ||||||||||||| ||||||| | | || | ||||||||||||||| |||| | ||||||||  ||||| |||||||||    
T  8227574 caacgtaggcagtatgcaaaacatcatgatataataatatcgcacgtaagtaaacaacatctcaaataatcacatataattcaagtaatgcatatacaat 8227475  T
Q  119 tatat 123  Q
    |||||    
T  8227474 tatat 8227470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 20360681 - 20360638
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  20360681 tctttcctaatcattattagacatgttcaggcactcaaaaacat 20360638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 4668274 - 4668217
Alignment:
Q  21 caacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaac 78  Q
    |||| |||| ||||||||| ||||||||||||||||||||||||||||| ||| ||||    
T  4668274 caacataggcagtatgcaactcatcatgatataacaatatcgaatgcaattcatcaac 4668217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Complemental strand, 4675121 - 4675064
Alignment:
Q  21 caacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaac 78  Q
    |||| |||| ||||||||| ||||||||||||||||||||||||||||| ||| ||||    
T  4675121 caacataggcagtatgcaactcatcatgatataacaatatcgaatgcaattcatcaac 4675064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 360
Target Start/End: Complemental strand, 28496279 - 28496144
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaa--ttcgttcttaaactattccagattcaatcttaatttccaatct 323  Q
    ||||||||||||| |||||| |||||||| ||||||||||||   | |||| |||  ||| |||| |  || |||||| |||||||| | | | || |||    
T  28496279 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattctcaaaagtttcattctaagtct-ttccaggttcaatctcattctacattct 28496181  T
Q  324 ttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    || ||||||||||||| ||||||||||||||||||||    
T  28496180 tttctaatcattattagacatgttcaggcactcaaaa 28496144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 19303623 - 19303540
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaa 85  Q
    |||||||||||||||| |||||||  ||| ||||| |||| || ||||| |||| |||||| ||||||| |||||||||||||||    
T  19303623 cttagttaaataacaa-caacaacacaggaagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaa 19303540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 1561714 - 1561753
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  1561714 tctttcctaatcattattagacatgttcaggcactcaaaa 1561753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 78
Target Start/End: Original strand, 4186435 - 4186482
Alignment:
Q  31 agtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaac 78  Q
    ||||||||| ||||||||||||||||||||||||||||| ||| ||||    
T  4186435 agtatgcaactcatcatgatataacaatatcgaatgcaattcatcaac 4186482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 17287506 - 17287467
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  17287506 tctttcctaatcattattagacatgttcaggcactcaaaa 17287467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 19303251 - 19303212
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  19303251 tctttcctaatcattattagacatgttcaggcactcaaaa 19303212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 20638004 - 20637965
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  20638004 tctttcctaatcattattagacatgttcaggcactcaaaa 20637965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 22779937 - 22779898
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  22779937 tctttcctaatcattattagacatgttcaggcactcaaaa 22779898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 25644358 - 25644444
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgc-aaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaa 86  Q
    ||||||||||||||| ||| |||| |||| ||||||| ||| || | ||||||||||||||| |||| || ||| ||||||||||||    
T  25644358 cttagttaaataacagacagcaacataggcagtatgcaaaaacagcgtgatataacaatatcaaatgtaagtcatcaacatctcaaa 25644444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 127
Target Start/End: Complemental strand, 31155450 - 31155355
Alignment:
Q  31 agtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaat-atcaacataattcatataatgtatatacaattatataaca 127  Q
    ||||||||| ||||| ||||||||||||||||||||||| ||| ||||   ||| || |||||||||| ||||  ||||| |||||| ||||||||||    
T  31155450 agtatgcaagtcatcgtgatataacaatatcgaatgcaattcatcaac--ttcatatcatcaacataaatcatgcaatgtttatacatttatataaca 31155355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 17106045 - 17106086
Alignment:
Q  223 tagctcgcgaggcgagggcctctactcgccattgcgagttca 264  Q
    ||||||||||| |||||||||||||||||||| |||||||||    
T  17106045 tagctcgcgagtcgagggcctctactcgccatggcgagttca 17106086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 19668663 - 19668728
Alignment:
Q  201 aacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcagg 266  Q
    |||||||  |||||||| |||  ||||||||||||||| |||||||||||| || |||||||||||    
T  19668663 aacaaggtgttctgtaattggacagctcgcgaggcgagagcctctactcgctatggcgagttcagg 19668728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 123
Target Start/End: Original strand, 18696569 - 18696648
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatat 123  Q
    |||||||||||||||||| || ||||||||| |||||||| || |||| | ||||||||| ||||| ||||||| ||||||    
T  18696569 tcatgatataacaatatc-aaagcaaatcaataacatctccaacatcatatataattcatgtaatgcatatacatttatat 18696648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 123
Target Start/End: Original strand, 18706387 - 18706466
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatat 123  Q
    |||||||||||||||||| || ||||||||| ||||||| ||| |||| | ||||||||| ||||| ||||||| ||||||    
T  18706387 tcatgatataacaatatc-aaagcaaatcaataacatcttaaacatcatatataattcatgtaatgcatatacatttatat 18706466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 360
Target Start/End: Complemental strand, 29808690 - 29808554
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaa-attcgttcttaaact-attccagattcaatcttaatttccaatct 323  Q
    ||||||||||||| |||||| |||||||| ||||||||||||   | || | ||  ||| |||| ||| |  |||||| |||||||| | | | || |||    
T  29808690 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattctacattct 29808591  T
Q  324 ttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    || ||||||||||||| ||||||||||||||||||||    
T  29808590 tttctaatcattattagacatgttcaggcactcaaaa 29808554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 361
Target Start/End: Original strand, 18696979 - 18697014
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaaa 361  Q
    ||||||||||||||||||| ||||||||||||||||    
T  18696979 cctaatcattattatacatattcaggcactcaaaaa 18697014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 325 - 360
Target Start/End: Complemental strand, 18821536 - 18821501
Alignment:
Q  325 tcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||| ||||||||||||||||||||    
T  18821536 tcctaatcattattaaacatgttcaggcactcaaaa 18821501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 357
Target Start/End: Original strand, 20109631 - 20109662
Alignment:
Q  326 cctaatcattattatacatgttcaggcactca 357  Q
    ||||||||||||||||||||||||||||||||    
T  20109631 cctaatcattattatacatgttcaggcactca 20109662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 267
Target Start/End: Complemental strand, 18821627 - 18821585
Alignment:
Q  225 gctcgcgaggcgagggcctctactcgccattgcgagttcaggt 267  Q
    |||||||||||||| |||||| |||||||| ||||||||||||    
T  18821627 gctcgcgaggcgagagcctctgctcgccatggcgagttcaggt 18821585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 359
Target Start/End: Complemental strand, 25603091 - 25603057
Alignment:
Q  325 tcctaatcattattatacatgttcaggcactcaaa 359  Q
    ||||||||||||||| |||||||||||||||||||    
T  25603091 tcctaatcattattagacatgttcaggcactcaaa 25603057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 359
Target Start/End: Complemental strand, 25611429 - 25611395
Alignment:
Q  325 tcctaatcattattatacatgttcaggcactcaaa 359  Q
    ||||||||||||||| |||||||||||||||||||    
T  25611429 tcctaatcattattagacatgttcaggcactcaaa 25611395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 364
Target Start/End: Original strand, 35008642 - 35008680
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    |||||||||| ||||||||||||||||||| ||||||||    
T  35008642 cctaatcattcttatacatgttcaggcacttaaaaacat 35008680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 16496282 - 16496370
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaa-tcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    |||||||||||||||| || |||| |||| ||||| |||| ||| ||||| |||| |||||| | ||||| |||||||||||| ||||||    
T  16496282 cttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaattgcaattcaacaacatcttaaatat 16496370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 264
Target Start/End: Complemental strand, 18177471 - 18177438
Alignment:
Q  231 gaggcgagggcctctactcgccattgcgagttca 264  Q
    |||||||||||||||||||||||| |||||||||    
T  18177471 gaggcgagggcctctactcgccatggcgagttca 18177438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 264
Target Start/End: Original strand, 18204400 - 18204433
Alignment:
Q  231 gaggcgagggcctctactcgccattgcgagttca 264  Q
    |||||||||||||||||||||||| |||||||||    
T  18204400 gaggcgagggcctctactcgccatggcgagttca 18204433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 358
Target Start/End: Original strand, 21939794 - 21939831
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaa 358  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  21939794 tctttcctaatcaatattacacatgttcaggcactcaa 21939831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 29060578 - 29060662
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaat-catcatgatataacaatatcgaatgcaaatcaacaacatctcaa 85  Q
    |||||||||||||||| || |||| |||| ||||| ||||  || ||||| |||| |||||| ||||||| |||||||||||||||    
T  29060578 cttagttaaataacaa-cagcaacataggcagtatacaaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaa 29060662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 360
Target Start/End: Original strand, 33443530 - 33443571
Alignment:
Q  319 aatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||| ||||||||||||| ||||| |||||||||||||||    
T  33443530 aatcttgcctaatcattattgtacatattcaggcactcaaaa 33443571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 2291264 - 2291177
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  2291264 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 2291177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 267
Target Start/End: Original strand, 16830108 - 16830152
Alignment:
Q  223 tagctcgcgaggcgagggcctctactcgccattgcgagttcaggt 267  Q
    |||||||||||||||| ||||||||||||||  ||||||| ||||    
T  16830108 tagctcgcgaggcgagagcctctactcgccacggcgagttaaggt 16830152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 18334676 - 18334589
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  18334676 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 18334589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 360
Target Start/End: Complemental strand, 18409562 - 18409498
Alignment:
Q  296 ttccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||| |||||||| | | | || |||||||||||||||| || ||||||| ||||||||||||    
T  18409562 ttccaggttcaatctcattctacattctttcctaatcattaatagacatgttaaggcactcaaaa 18409498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 265
Target Start/End: Original strand, 21939698 - 21939738
Alignment:
Q  225 gctcgcgaggcgagggcctctactcgccattgcgagttcag 265  Q
    |||||||||||||| |||||| |||||||| ||||||||||    
T  21939698 gctcgcgaggcgagagcctctgctcgccatggcgagttcag 21939738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 123
Target Start/End: Original strand, 22782305 - 22782385
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatat-ca-acataattcatataatgtatatacaattatat 123  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| ||| || ||||||||||  ||||| ||||||||||||||    
T  22782305 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacacataattcaagtaatgcatatacaattatat 22782385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 23414969 - 23415045
Alignment:
Q  48 gatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatat 123  Q
    |||||||||||||| ||||  ||||||||||| || ||| |||| | |||||||| |||||| |||||||| |||||    
T  23414969 gatataacaatatcaaatgataatcaacaacaacttaaacatcatatataattcacataatgcatatacaaatatat 23415045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 267
Target Start/End: Complemental strand, 25611533 - 25611489
Alignment:
Q  223 tagctcgcgaggcgagggcctctactcgccattgcgagttcaggt 267  Q
    |||||||||||||||| |||||| ||| |||| ||||||||||||    
T  25611533 tagctcgcgaggcgagagcctctgctctccatggcgagttcaggt 25611489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 25629394 - 25629354
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaa 85  Q
    ||||| ||||||||||| ||||||| |||||||||||||||    
T  25629394 catgacataacaatatcaaatgcaagtcaacaacatctcaa 25629354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 26924724 - 26924637
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  26924724 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 26924637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 360
Target Start/End: Original strand, 29060954 - 29060990
Alignment:
Q  324 ttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||||  ||||||||||||||||||||    
T  29060954 ttcctaatcattattggacatgttcaggcactcaaaa 29060990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 35008463 - 35008503
Alignment:
Q  224 agctcgcgaggcgagggcctctactcgccattgcgagttca 264  Q
    ||||||||||||||| |||||||||||| || |||||||||    
T  35008463 agctcgcgaggcgagagcctctactcgctatggcgagttca 35008503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 167 - 292
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    |||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  167 cttagttaaacaacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaaacataatt 266  T
Q  100 catataatgtatatacaattatataa 125  Q
    ||| ||||||||||||||||||||||    
T  267 catgtaatgtatatacaattatataa 292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 203 - 361
Target Start/End: Original strand, 422 - 581
Alignment:
Q  203 caaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactattccag 301  Q
    |||| |||||||||||||| |  ||||||||||||| |||||| |||||||| ||||||||||||||||||| |  |||||| |||| |||   |||||     
T  422 caagacattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggtgcaactcacaaaaattcattctaaaatctttccaa 521  T
Q  302 attcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaa 361  Q
     |||||||| | | |||||||||||||||||||||||| ||||||| |||||||||||||    
T  522 gttcaatctcattctccaatctttcctaatcattattagacatgtttaggcactcaaaaa 581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0810 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 198 - 364
Target Start/End: Original strand, 3219 - 3386
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaa-ttcgttcttaaactat 296  Q
    |||||||||||||||||||||| || |  || ||||||||||||||||||||||||| ||||||||||||  ||||| |  || ||||||||||||||||    
T  3219 ctaaacaaggcattctgtaactagtcaattcacgaggcgagggcctctactcgccatggcgagttcaggtataactcccacaagttcgttcttaaactat 3318  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||| |||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3319 tccaggttcaatctcaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacat 3386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 100; Significance: 2e-49; HSPs: 8)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 62236 - 62434
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 100  Q
    |||||||||| |||||||| |||| |||| |||||| ||| ||||||| ||||| |||||||||||||   |||||||||||||||||||||||||||||    
T  62236 cttagttaaacaacaaacagcaacataggcagtatgaaaaacatcatggtataataatatcgaatgca---caacaacatctcaaatatcaacataattc 62332  T
Q  101 atataatgtatatacaattatataacagtagcagcaacattagaatat-ataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    ||||||||||||||||||||||||||| || || || ||||||   || | |||||| | ||||||||||||||||||||| ||||| ||||||||||||    
T  62333 atataatgtatatacaattatataacattaacaacatcattagttcataacaattcaggcttactgaaacaacaacagcaagataaacaacttagtttct 62432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 226 - 364
Target Start/End: Original strand, 132968 - 133107
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaatt-cgttcttaaactattccagattcaatcttaatttccaatctt 324  Q
    ||||||||||||| |||||| |||||||| |||||||||||| ||  || | ||||| | |||| ||    |||||| |||||||| | | |||||||||    
T  132968 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttcacaaaatttcattctaaagtctttccaggttcaatctcattctccaatctt 133067  T
Q  325 tcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  133068 tcctaatcattattagacatgttcaggcactcaaaaacat 133107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 132696 - 132809
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaa-tcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataatt 99  Q
    ||||| ||||||||||||| |||| || |||||||||||| ||||||||||| |||||||||||||| || ||| |||| |||||| ||||||||||||     
T  132696 cttagataaataacaaacagcaacataagtagtatgcaaaatcatcatgatacaacaatatcgaatgtaa-tcatcaacgtctcaattatcaacataatc 132794  T
Q  100 catataatgtatata 114  Q
    ||| |||||||||||    
T  132795 catttaatgtatata 132809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 134289 - 134376
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  134289 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 134376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 136758 - 136845
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  136758 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 136845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 139227 - 139314
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  139227 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 139314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 141696 - 141783
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  141696 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 141783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 144165 - 144252
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacata--attcatataatgtatatacaattatataacagta 130  Q
    ||||| |||| |||||| ||||||| |||||||| |||||| |||  |||||  |||||  ||||| |||||||||||||| ||||||    
T  144165 catgacataataatatcaaatgcaagtcaacaacgtctcaattattcacatataattcaagtaatgcatatacaattatatcacagta 144252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 96; Significance: 5e-47; HSPs: 3)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 10624 - 10497
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    ||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||    
T  10624 cttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatctcaaatatcaaacataatt 10525  T
Q  100 catataatgtatatacaattatataaca 127  Q
    ||| ||||||||||||||||||||||||    
T  10524 catgtaatgtatatacaattatataaca 10497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 364
Target Start/End: Complemental strand, 10280 - 10235
Alignment:
Q  319 aatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||    
T  10280 aatctttactaatcattattagacatgttcaggcactcaaaaacat 10235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 274
Target Start/End: Complemental strand, 10371 - 10298
Alignment:
Q  201 aacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactc 274  Q
    ||||||||| | |||||| ||  | ||||||||||||| ||||||||||||  | ||||||||||||| |||||    
T  10371 aacaaggcagtatgtaacaggacaactcgcgaggcgagagcctctactcgctttggcgagttcaggtgtaactc 10298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 96; Significance: 5e-47; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 32574 - 32772
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaa-cataatt 99  Q
    |||||||||  |||||||| |||| |||| |||||||||| || ||||||||||||||||| ||||||| |||||||||||||||| ||||| |||||||    
T  32574 cttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaa-tcaacaacatctcaaacatcaaacataatt 32672  T
Q  100 catataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    ||| |||||||||||||| ||||||||| || ||  ||||||||| ||||||||||| | |||||||||||| |||| ||| ||||| ||||||||||||    
T  32673 catgtaatgtatatacaactatataacattaacaaaaacattagattatataattcaggcttactgaaacaataacaacaagataaacaacttagtttct 32772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 201 - 357
Target Start/End: Original strand, 32826 - 32983
Alignment:
Q  201 aacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactattcc 299  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||| |  |||| | |||||| ||||||||    
T  32826 aacaaggcattctgtaactgggtagctcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactcccaaaaatccattcttagactattcc 32925  T
Q  300 agattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactca 357  Q
    |  |||||||| ||| |  ||||||||||||||||||||| |||||||||||||||||    
T  32926 aagttcaatctcaatctagaatctttcctaatcattattacacatgttcaggcactca 32983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 325 - 360
Target Start/End: Complemental strand, 51590 - 51555
Alignment:
Q  325 tcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||| ||||||||||||||||||||    
T  51590 tcctaatcattattaaacatgttcaggcactcaaaa 51555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 95; Significance: 2e-46; HSPs: 3)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 199 - 364
Target Start/End: Complemental strand, 15663 - 15497
Alignment:
Q  199 taaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaact-ctctaaattcgttcttaaactatt 297  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| || | |   |||| | |||||||||||||    
T  15663 taaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccatggcgagttcatgtgtaattccgaaaaatccattcttaaactatt 15564  T
Q  298 ccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    |||| |||||||| ||| |  |||||||||||||||| |||||||||||| ||||||||||||||||    
T  15563 ccaggttcaatctcaatctataatctttcctaatcatcattatacatgtttaggcactcaaaaacat 15497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 15860 - 15792
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaa 69  Q
    |||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||||    
T  15860 cttagttaaataacaaacaacaacataggcagtatgcaaatcatgatgatataacaatatcgaatgcaa 15792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 149 - 201
Target Start/End: Complemental strand, 15766 - 15714
Alignment:
Q  149 ataattcaagtttactgaaacaacaacagcaaaataaataacttagtttctaa 201  Q
    |||||||| | ||||||||||||||||||||| ||||| ||||||||||||||    
T  15766 ataattcaggcttactgaaacaacaacagcaagataaacaacttagtttctaa 15714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 93; Significance: 3e-45; HSPs: 4)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 45 - 196
Target Start/End: Original strand, 8097 - 8249
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaa-cataattcatataatgtatatacaattatataacagtagcagcaacattag 143  Q
    ||||||||||||||||| ||||||| |||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||| || || |||||||||    
T  8097 catgatataacaatatcaaatgcaagtcaacaacatctcaaacatcaaacataattcatgtaatgtatatacaattatataacattaacaacaacattag 8196  T
Q  144 aatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtt 196  Q
    | ||||||||||| | ||||||||||||||||||||  ||||| |||||||||    
T  8197 attatataattcaggcttactgaaacaacaacagcaggataaacaacttagtt 8249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 6853 - 7048
Alignment:
Q  4 agttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataattcat 102  Q
    |||||||||||||||| |||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||   |||||||||| ||||||| ||||    
T  6853 agttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatattgaatgcaaatcaacaa---ctcaaatatcaaacataagtcat 6949  T
Q  103 ataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttctaa 201  Q
     |||||||||||||||||||||||| ||  | ||||||||    ||||   |||   |||||| |||||||||||||| ||||| ||||||||||||||    
T  6950 gtaatgtatatacaattatataacattataaacaacattaattcatatgcatcagtcttactggaacaacaacagcaagataaacaacttagtttctaa 7048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 198 - 364
Target Start/End: Original strand, 7098 - 7265
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactat 296  Q
    |||||||||||||||||||||| |||||||||| ||||||| ||||||||||||||| |||||||||||| ||  || |  |||||| |||| |||   |    
T  7098 ctaaacaaggcattctgtaactagttagctcgcaaggcgagagcctctactcgccatggcgagttcaggttcagttcacaaaaattcattctaaaatctt 7197  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||| |||||||| | | |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  7198 tccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacat 7265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 201 - 364
Target Start/End: Original strand, 8306 - 8470
Alignment:
Q  201 aacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactattcc 299  Q
    ||||| ||||| |||||||||  | ||||||||||||||||||| ||||||||| ||||||||||||| ||||| |  |||| | |||||||||||||||    
T  8306 aacaaagcattatgtaactggacaactcgcgaggcgagggcctccactcgccatggcgagttcaggtgtaactcccaaaaatccattcttaaactattcc 8405  T
Q  300 agattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    || |||||||| ||| |  ||||||| ||||||||||||| |||| ||||| ||| |||||||||    
T  8406 aggttcaatctcaatctagaatcttttctaatcattattacacatattcagacacccaaaaacat 8470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 92; Significance: 1e-44; HSPs: 6)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 129943 - 130070
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    ||||||||||||||| ||| |||| |||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||    
T  129943 cttagttaaataacacacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatctcaaatatcaaacataatt 130042  T
Q  100 catataatgtatatacaattatataaca 127  Q
    ||| ||||||||||||||||||||||||    
T  130043 catgtaatgtatatacaattatataaca 130070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 198 - 364
Target Start/End: Original strand, 130194 - 130361
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaactat 296  Q
    |||||||||||||| ||||||| |||||||||||||||||| |||||| |||||||| ||||||| ||||| || || |  |||| | ||||||||||||    
T  130194 ctaaacaaggcattttgtaactagttagctcgcgaggcgagagcctctgctcgccatggcgagtttaggtgtaattcccaaaaatccattcttaaactat 130293  T
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||| |||||||| ||| |  ||||||| |||||||| | || ||||||||||||||||||||||||    
T  130294 tccaggttcaatctcaatctagaatcttttctaatcataactagacatgttcaggcactcaaaaacat 130361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 198 - 266
Target Start/End: Complemental strand, 60547 - 60479
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcagg 266  Q
    |||||||| | |||||||||||||  | ||||||||||||| |||||||||||| || |||||||||||    
T  60547 ctaaacaatgtattctgtaactgggaaactcgcgaggcgagagcctctactcgctatggcgagttcagg 60479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 60799 - 60713
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatca--tcatgatataacaatatcgaatgcaaatcaacaacatctcaaa 86  Q
    |||||||||  |||||||| |||| |||| ||||| |||| ||  |||||||||| ||||||| ||||||||||||||||||||||||    
T  60799 cttagttaataaacaaacagcaacataggcagtatacaaaacagctcatgatataccaatatc-aatgcaaatcaacaacatctcaaa 60713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 326 - 357
Target Start/End: Complemental strand, 60343 - 60312
Alignment:
Q  326 cctaatcattattatacatgttcaggcactca 357  Q
    ||||||||||||||||||||||||||||||||    
T  60343 cctaatcattattatacatgttcaggcactca 60312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 201
Target Start/End: Original strand, 130103 - 130144
Alignment:
Q  160 ttactgaaacaacaacagcaaaataaataacttagtttctaa 201  Q
    |||||| |||||||||||||| ||||| ||||||||||||||    
T  130103 ttactggaacaacaacagcaagataaacaacttagtttctaa 130144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 2889 - 2686
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataattc 100  Q
    ||||||||||||||||||| | || |||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||    
T  2889 cttagttaaataacaaacagctacataggcagtatgcaaatcatcatgatataacaatatcaaatgcaaatcaacaacatctcaaatatcagcttaattc 2790  T
Q  101 atataatg----tatatacaattatataacagtagcagcaacattagaatata-taattcaagtttactgaaacaacaacagcaaaataaataacttagt 195  Q
    ||| ||||    ||||||||||  |||| || || || ||||| ||||  ||| ||| ||| | ||||||||||||||||||||| ||||| ||||||||    
T  2789 ataaaatgtatatatatacaat--tataccattaacaacaacaatagatcatattaaatcaggcttactgaaacaacaacagcaagataaacaacttagt 2692  T
Q  196 ttctaa 201  Q
    ||||||    
T  2691 ttctaa 2686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 226 - 360
Target Start/End: Complemental strand, 2608 - 2474
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcgttcttaaactattccagattcaatcttaatttccaatcttt 325  Q
    ||||||||||||| ||||||||||||||| |||||||||||| ||  || | || ||| |||| |||   || ||| ||||| || | | ||||||||||    
T  2608 ctcgcgaggcgagagcctctactcgccatggcgagttcaggttcagttcacaaatttcattctaaaatctttacaggttcaaactcattctccaatcttt 2509  T
Q  326 cctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||| ||||||||||| ||||||||    
T  2508 cctaatcattattagacatgttcaggtactcaaaa 2474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 88; Significance: 3e-42; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 22753 - 22626
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    ||||||||||||||||||| | || |||  ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||||    
T  22753 cttagttaaataacaaacagcgacatagacagtatgcaaatcatcatgatataacaatatcgaatgcaagtcatcaacatctcaaatatcaaacataatt 22654  T
Q  100 catataatgtatatacaattatataaca 127  Q
    ||| ||||||||||||||||||||||||    
T  22653 catgtaatgtatatacaattatataaca 22626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 358
Target Start/End: Complemental strand, 80042 - 80005
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaa 358  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  80042 tctttcctaatcaatattagacatgttcaggcactcaa 80005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 1120 - 1319
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||  ||| |||||| ||||| ||| |||||||||    
T  1120 cttagttaaataacaaacaacaacataggcagtatgcaaatcatcatgatataacaatatcgaatacaggtcatcaacatttcaaacatcaaacataatt 1219  T
Q  100 catataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    |||  ||||||||||||| ||||||||| || || |||||| | |  |||||  |||   |||||| |||||||||| ||| ||||| ||||||||||||    
T  1220 catggaatgtatatacaactatataacattaacaacaacatcaaatcatatacatcagtcttactggaacaacaacaacaagataaaaaacttagtttct 1319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 45875 - 45748
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    |||||||||||||||||||  ||  |||| |||||||||||||||||||||||||||||||||||| || ||| ||||||||||| |||| |||||||||    
T  45875 cttagttaaataacaaacagaaaaataggcagtatgcaaatcatcatgatataacaatatcgaatgtaagtcatcaacatctcaattatcaaacataatt 45776  T
Q  100 catataatgtatatacaattatataaca 127  Q
    ||| | ||||||||||||||||||||||    
T  45775 catgtgatgtatatacaattatataaca 45748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 198 - 364
Target Start/End: Complemental strand, 45624 - 45456
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc--taaattcgttcttaaacta 295  Q
    ||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||| ||| || |   |||||| ||| |||| |     
T  45624 ctaaacaagacattctgtaactagttagctcgcgaggcgagagcctctactcgccatggcgagttcaggtacaattcacaaaaaattcattc-taaagtc 45526  T
Q  296 tt-ccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    || |||| |||||||| | |  ||||||||||||||||||||||| |||| |||||||||||||||||||    
T  45525 ttaccaggttcaatctcattccccaatctttcctaatcattattagacatattcaggcactcaaaaacat 45456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 76; Significance: 4e-35; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 160722 - 160848
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    |||||||||||||||| || |||| |||| ||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||| ||||||| |    
T  160722 cttagttaaataacaatcagcaacataggcagtatgcaaatcatcatgatataacaatatcaaatgc-aatcaacaacatgtcaaatatcaaacataagt 160820  T
Q  100 catataatgtatatacaattatataaca 127  Q
    ||| |||| |||||||||||||||||||    
T  160821 catgtaatatatatacaattatataaca 160848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 198 - 364
Target Start/End: Original strand, 160972 - 161139
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaa-ttcgttcttaaactat 296  Q
    |||| |||| |||||||||||| |||| |||| |||| ||| ||||||||||||||| |||| ||||||| ||  || | ||| ||| |||| ||| | |    
T  160972 ctaaccaagacattctgtaactagttacctcgtgaggtgagagcctctactcgccatggcgacttcaggttcagttcacaaaaattcattct-aaagtct 161070  T
Q  297 -tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
     ||||| |||||||| | | |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  161071 ctccaggttcaatctcattctccaatctttcctaatcattattagacatgttcaggcactcaaaaacat 161139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 360
Target Start/End: Original strand, 446965 - 446999
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||||||||||||| |||||    
T  446965 cctaatcattattatacatgttcaggcacccaaaa 446999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 360
Target Start/End: Original strand, 497896 - 497930
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||||||||||||| |||||    
T  497896 cctaatcattattatacatgttcaggcacacaaaa 497930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 73; Significance: 3e-33; HSPs: 8)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 44 - 198
Target Start/End: Complemental strand, 136407 - 136252
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatataacagtagcagcaacatta 142  Q
    |||||||||||||||||| ||||||||||||||||||| ||   |||  ||||||||||| |||||||||||||| ||||||||| || || ||||||||    
T  136407 tcatgatataacaatatcaaatgcaaatcaacaacatcacatc-atcgtacataattcatgtaatgtatatacaactatataacattaacaacaacatta 136309  T
Q  143 gaat-atataattcaagtttactgaaacaacaacagcaaaataaataacttagtttc 198  Q
     ||| |||||||||| | ||||||||||||||||||||| ||||| |||||||||||    
T  136308 aaatcatataattcaggcttactgaaacaacaacagcaagataaacaacttagtttc 136252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 44 - 198
Target Start/End: Complemental strand, 145115 - 144960
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatataacagtagcagcaacatta 142  Q
    |||||||||||||||||| ||||||||||||||||||| ||   |||  ||||||||||| |||||||||||||| ||||||||| || || ||||||||    
T  145115 tcatgatataacaatatcaaatgcaaatcaacaacatcacatc-atcgtacataattcatgtaatgtatatacaactatataacattaacaacaacatta 145017  T
Q  143 gaat-atataattcaagtttactgaaacaacaacagcaaaataaataacttagtttc 198  Q
     ||| |||||||||| | ||||||||||||||||||||| ||||| |||||||||||    
T  145016 aaatcatataattcaggcttactgaaacaacaacagcaagataaacaacttagtttc 144960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 296 - 364
Target Start/End: Original strand, 62947 - 63015
Alignment:
Q  296 ttccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    |||||| |||||||| | | |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  62947 ttccaggttcaatctcattctccaatctttcctaatcattattagacatgttcatgcactcaaaaacat 63015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 124993 - 125032
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  124993 tctttcctaatcattattagacatgttcaggcactcaaaa 125032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 357
Target Start/End: Complemental strand, 136044 - 135965
Alignment:
Q  278 aaattcgttcttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactca 357  Q
    |||||| || ||||||| | |||| |||||||| ||| |  || ||| |||||||||||||||||||||||| |||||||    
T  136044 aaattcatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaagcactca 135965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 278 - 357
Target Start/End: Complemental strand, 144752 - 144673
Alignment:
Q  278 aaattcgttcttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactca 357  Q
    |||||| || ||||||| | |||| |||||||| ||| |  || ||| |||||||||||||||||||||||| |||||||    
T  144752 aaattcatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaagcactca 144673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 136172 - 136132
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcagg 266  Q
    ||||||||||||| |||||||||||| || |||||||||||    
T  136172 ctcgcgaggcgagagcctctactcgctatggcgagttcagg 136132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 266
Target Start/End: Complemental strand, 144880 - 144840
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcagg 266  Q
    ||||||||||||| |||||||||||| || |||||||||||    
T  144880 ctcgcgaggcgagagcctctactcgctatggcgagttcagg 144840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 1152 - 1028
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataatt 99  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||||||||| ||||||||||| ||||||||||   ||||| ||||| || ||| |    
T  1152 cttagttaaataacaaacaacaacataggcagtatgcaaaccatcatgatataataatatcgaatgtaaatcaacaa---ctcaattatcagacttaagt 1056  T
Q  100 catataatgtatatacaattatataaca 127  Q
    ||| ||||||||||||||||||||||||    
T  1055 catgtaatgtatatacaattatataaca 1028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 224 - 364
Target Start/End: Complemental strand, 43592 - 43451
Alignment:
Q  224 agctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcg-ttcttaaactattccagattcaatcttaatttccaatc 322  Q
    ||||||||||||||| ||||||||||| ||| |||||| |||||| ||||| | ||| ||  ||||||||||||||||| |||||||| ||| |  ||||    
T  43592 agctcgcgaggcgagagcctctactcgtcatggcgagtacaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcaatctagaatc 43493  T
Q  323 tttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||| |||||||| |||| ||||||||||||||||||||||||    
T  43492 ttttctaatcataattagacatgttcaggcactcaaaaacat 43451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 224 - 364
Target Start/End: Complemental strand, 47512 - 47371
Alignment:
Q  224 agctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcg-ttcttaaactattccagattcaatcttaatttccaatc 322  Q
    ||||||||||||||| ||||||||||| ||| || ||| |||||| ||||| | ||| ||  ||||||||||||||||| |||||||| ||| |  ||||    
T  47512 agctcgcgaggcgagagcctctactcgtcatggctagtacaggtgtaactcccaaaaatccattcttaaactattccaggttcaatctcaatctagaatc 47413  T
Q  323 tttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||| |||||||| |||| ||||||||||||||||||||||||    
T  47412 ttttctaatcataattagacatgttcaggcactcaaaaacat 47371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 15699 - 15838
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    ||||||||||||||||||| |||| |||| ||||| |||| ||||||||||||| ||||||||||| ||||||||||   ||||| |||| ||| ||| |    
T  15699 cttagttaaataacaaacagcaacataggcagtatacaaaccatcatgatataataatatcgaatgtaaatcaacaa---ctcaattatcaaacttaagt 15795  T
Q  100 catataatgtatatacaattatataacagtagcagcaacatta 142  Q
    ||| |||||||||||||||||||||||| ||  ||||||||||    
T  15796 catgtaatgtatatacaattatataacattataagcaacatta 15838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 16069 - 16108
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  16069 tctttcctaatcattattagacatattcaggcactcaaaa 16108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 65; Significance: 2e-28; HSPs: 4)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 8157 - 7960
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatca--tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataa 97  Q
    |||||||||  |||||||| |||| |||| ||||| |||| ||  |||||||||||||||||| ||| ||||||||||||||| |||  |||| | ||||    
T  8157 cttagttaacaaacaaacagcaacataggcagtatacaaaccagttcatgatataacaatatcaaatacaaatcaacaacatcacaac-atcatatataa 8059  T
Q  98 ttcatataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagttt 197  Q
    ||||| |||||||||||||| ||||||||| || || |||||||| |  |||||||||| | ||||||||||   |||||||| ||||| ||||||||||    
T  8058 ttcatgtaatgtatatacaactatataacattatcaacaacattaaatcatataattcaggcttactgaaac---aacagcaagataaacaacttagttt 7962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 127
Target Start/End: Complemental strand, 29354 - 29239
Alignment:
Q  10 ataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataattcatataatg 108  Q
    |||||||||| |||| |||||||||| ||||  |||||||||||| ||||||||||| |||||| |||   ||||| |||| ||| ||| |||| || ||    
T  29354 ataacaaacagcaacataggtagtattcaaactatcatgatataataatatcgaatgtaaatcagcaa---ctcaattatcaaacttaagtcatgtactg 29258  T
Q  109 tatatacaattatataaca 127  Q
    |||||||||||||||||||    
T  29257 tatatacaattatataaca 29239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 28990 - 28951
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  28990 tctttcctaatcattattagacatgttcaggcactcaaaa 28951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 7906 - 7841
Alignment:
Q  201 aacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcagg 266  Q
    ||||||||||| |||||||||  | ||||||||||||| |||| ||||||| || |||||||||||    
T  7906 aacaaggcattttgtaactgggcaactcgcgaggcgagagcctttactcgctatggcgagttcagg 7841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 2035 - 2174
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    |||||||||||||||||||  ||| |||| |||||||||| ||||||||||||| ||||||||||| ||||||||||   ||||| |||| ||| ||| |    
T  2035 cttagttaaataacaaacacaaacataggcagtatgcaaaccatcatgatataataatatcgaatgtaaatcaacaa---ctcaattatcaaacttaagt 2131  T
Q  100 catataatgtatatacaattatataacagtagcagcaacatta 142  Q
    ||| |||||||||||||||||||||||| ||  ||||||||||    
T  2132 catgtaatgtatatacaattatataacattataagcaacatta 2174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 11330 - 11469
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataatt 99  Q
    ||||||||||||||||||| |||| |||| |||||||||| ||||||||||||| ||||||||||| ||||||||||   ||||| |||| ||| ||| |    
T  11330 cttagttaaataacaaacagcaacataggcagtatgcaaaccatcatgatataataatatcgaatgtaaatcaacaa---ctcaattatcaaacttaagt 11426  T
Q  100 catataatgtatatacaattatataacagtagcagcaacatta 142  Q
    ||| |||||||||||| ||||||||||| ||  ||||||||||    
T  11427 catgtaatgtatatactattatataacattataagcaacatta 11469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 203 - 364
Target Start/End: Complemental strand, 7886 - 7724
Alignment:
Q  203 caaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaa-ttcgttcttaaactattccag 301  Q
    |||||||||||| |||  | || ||||||||||||| |||||||||||| || ||||||||||||| ||| | | ||| ||| |||||||||||||| ||    
T  7886 caaggcattctggaacaaggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaacccccaaaaattcattcttaaactattctag 7787  T
Q  302 attcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
     |||||||| | | |   |||||||||||||||||||| |||||||||| |||||||||||||    
T  7786 gttcaatctcagtctaggatctttcctaatcattattacacatgttcagacactcaaaaacat 7724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 8144 - 8018
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatca--tcatgatataacaatatcgaatgcaaatcaacaacatctcaaata-tca-acata 96  Q
    |||| |||||||||||| | || | |||| |||||||||||||  ||||||||||| |||||| |||| || |||||||||||| ||| | ||| | |||    
T  8144 cttaattaaataacaaatagcagcataggcagtatgcaaatcagctcatgatataataatatcaaatgaaattcaacaacatcttaaacattcatatata 8045  T
Q  97 attcatataatgtatatacaattatat 123  Q
    |||||  ||||||||||| ||||||||    
T  8044 attcaagtaatgtatataaaattatat 8018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 32136 - 32249
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaa-tcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataatt 99  Q
    ||||| |||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||  ||||| |||| |||||| ||||||||||||     
T  32136 cttagataaataacaaacaacaacataagtagtatgcaaaatcatcatgatataacaatatcgaatg-taatcatcaacgtctcaattatcaacataatc 32234  T
Q  100 catataatgtatata 114  Q
    ||| |||||||||||    
T  32235 catttaatgtatata 32249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 226 - 364
Target Start/End: Original strand, 32398 - 32537
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaatt-cgttcttaaactattccagattcaatcttaatttccaatctt 324  Q
    ||||||||| ||| |||||| |||||||| |||||||||||| ||  || | ||||| | |||| ||    |||||| |||||||| | | |||||||||    
T  32398 ctcgcgaggtgagagcctctgctcgccatggcgagttcaggttcagttcacaaaatttcattctaaagtctttccaggttcaatctcattctccaatctt 32497  T
Q  325 tcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  32498 tcctaatcattattagacatgttcaggcactcaaaaacat 32537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 6367 - 6166
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatca--tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataa 97  Q
    |||||||||  |||||||| |||| |||| |||||  ||| ||  ||||||||| |||||||| |||||||||||||||||||||||| |||| | ||||    
T  6367 cttagttaatgaacaaacagcaacataggcagtatataaaacagctcatgatatgacaatatcaaatgcaaatcaacaacatctcaaacatcatatataa 6268  T
Q  98 ttcatataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagttt 197  Q
    ||||| ||||| ||||||| |||||| ||| ||  | |||||| | |  |||||||||| | ||||||||||||||||||  | ||||  ||||||||||    
T  6267 ttcatgtaatgcatatacatttatatcacattaataacaacatcaaatcatataattcaggcttactgaaacaacaacagtgagataagcaacttagttt 6168  T
Q  198 ct 199  Q
    ||    
T  6167 ct 6166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 59; Significance: 6e-25; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 103714 - 103523
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatca--tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaacataat 98  Q
    |||||||||  || ||||| |||| ||||||||||  ||| ||  |||||||||||||||||| |||||||| ||||||||||      ||  |||||||    
T  103714 cttagttaataaataaacagcaacataggtagtataaaaaacaattcatgatataacaatatcaaatgcaaaacaacaacatc------at--acataat 103623  T
Q  99 tcatataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttc 198  Q
    |||| |||||||||||||| || |||||| || || |||||||| |  |||||||||| | |||||||||||||||||| || ||||| |||||||||||    
T  103622 tcatgtaatgtatatacaactacataacattaacaacaacattaaatcatataattcaggcttactgaaacaacaacaggaagataaagaacttagtttc 103523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 357
Target Start/End: Complemental strand, 103336 - 103257
Alignment:
Q  278 aaattcgttcttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactca 357  Q
    |||||| || ||||||| | |||| |||||||| ||| |  || ||| ||||||||||||||||||||||||||||||||    
T  103336 aaattcatttttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactca 103257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 58; Significance: 2e-24; HSPs: 5)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 16183 - 16098
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaa 86  Q
    |||||||||  ||||||||||||| ||||||||||||||| || ||||||||||||||||| |||| |||||||||||||||||||    
T  16183 cttagttaataaacaaacaacaacataggtagtatgcaaaacaacatgatataacaatatcaaatgtaaatcaacaacatctcaaa 16098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 13166 - 13247
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatct 82  Q
    |||||||||  ||||||||||||| |||| |||||||||| || ||||||||||||||||| ||||||||||||||||||||    
T  13166 cttagttaataaacaaacaacaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaaatcaacaacatct 13247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 264
Target Start/End: Complemental strand, 15932 - 15866
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttca 264  Q
    ||||||||||||||||||||||||  | |||||||||||||||||| ||||||| || |||||||||    
T  15932 ctaaacaaggcattctgtaactgggcaactcgcgaggcgagggcctatactcgctatggcgagttca 15866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 285 - 355
Target Start/End: Original strand, 13582 - 13652
Alignment:
Q  285 ttcttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcact 355  Q
    |||||||||| | |||| |||||||| ||| |  || ||| ||||||||||||||||||||||||||||||    
T  13582 ttcttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcact 13652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 262
Target Start/End: Original strand, 13418 - 13482
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagtt 262  Q
    |||||||||||||||||||||| |  | |||  ||||||||||||| ||||||| || |||||||    
T  13418 ctaaacaaggcattctgtaactaggcaactcatgaggcgagggcctatactcgctatggcgagtt 13482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 58; Significance: 2e-24; HSPs: 3)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 27832 - 27747
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaa 86  Q
    |||||||||  ||||||||||||| ||||||||||||||| || ||||||||||||||||| |||| |||||||||||||||||||    
T  27832 cttagttaataaacaaacaacaacataggtagtatgcaaaacagcatgatataacaatatcaaatgtaaatcaacaacatctcaaa 27747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 360
Target Start/End: Complemental strand, 27347 - 27313
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||||||||||||||||||||||||    
T  27347 cctaatcattattatacatgttcaggcactcaaaa 27313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 226 - 265
Target Start/End: Complemental strand, 27524 - 27485
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcag 265  Q
    |||||||||||||||||||||||||| || ||||||||||    
T  27524 ctcgcgaggcgagggcctctactcgctatggcgagttcag 27485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 57; Significance: 1e-23; HSPs: 3)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 34161 - 34300
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaa-cataatt 99  Q
    |||||||||||||||||||||||| |||| ||||| |||  ||||||||||||| ||||||||||| |||||||||||   |||| |||||| | ||| |    
T  34161 cttagttaaataacaaacaacaacataggcagtatacaacccatcatgatataataatatcgaatgtaaatcaacaac---tcaattatcaaacttaagt 34257  T
Q  100 catataatgtatatacaattatataacagtagcagcaacatta 142  Q
    ||  |||| ||||||||||||||||||| ||  ||||||||||    
T  34258 caagtaatatatatacaattatataacattataagcaacatta 34300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 34531 - 34570
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  34531 tctttcctaatcattattagacatgttcaggcactcaaaa 34570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 13503 - 13542
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||| |||| ||||||||||||||||||||    
T  13503 tctttcctaatcataattagacatgttcaggcactcaaaa 13542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 23966 - 23898
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaa 69  Q
    ||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||    
T  23966 cttagttaaataacaaacagcaacataggcagtatgcaaatcatcatgatataacaatatcgaatgcaa 23898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 296 - 360
Target Start/End: Original strand, 20498 - 20562
Alignment:
Q  296 ttccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||| |||||||||| | | || ||||||||||||||||||| ||||||||||||||||||||    
T  20498 ttccaggttcaatcttattctacattctttcctaatcattattagacatgttcaggcactcaaaa 20562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 57; Significance: 1e-23; HSPs: 4)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 53632 - 53508
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaata-tca-acataat 98  Q
    |||||||||  |||||||| |||| |||| |||||||||| || ||||||||||||||||| ||||||| ||| |||||||||||||| ||| | |||||    
T  53632 cttagttaataaacaaacagcaacataggcagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaacatctcaaatattcatatataat 53533  T
Q  99 tcatataatgtatatacaattatat 123  Q
    |||  ||||||||||||||||||||    
T  53532 tcaagtaatgtatatacaattatat 53508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 360
Target Start/End: Complemental strand, 53214 - 53142
Alignment:
Q  288 ttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||| | |||| |||||||| ||| |  || ||| ||||||||||||||||| |||||||||||||||||    
T  53214 ttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacttgttcaggcactcaaaa 53142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 226 - 265
Target Start/End: Complemental strand, 53353 - 53314
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcag 265  Q
    |||||||||||||||||||||||||| || ||||||||||    
T  53353 ctcgcgaggcgagggcctctactcgctatggcgagttcag 53314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 8004 - 7966
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaa 359  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  8004 tctttcctaatcaatattagacatgttcaggcactcaaa 7966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 57; Significance: 1e-23; HSPs: 5)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 44 - 199
Target Start/End: Complemental strand, 129009 - 128853
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatataacagtagcagcaacatta 142  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||| | ||||||||| ||||| |||||||| ||||| ||| ||  | |||||| |    
T  129009 tcatgatataacaatatcaaatgcaaatcaacaacatctcaaacatcatatataattcatgtaatggatatacaaatatatcacattattaacaacatca 128910  T
Q  143 gaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
     |  || ||| ||| | |||||||||||||||||| || ||||  ||||||||||||    
T  128909 aatcatctaaatcaggcttactgaaacaacaacagtaagataagcaacttagtttct 128853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 44 - 196
Target Start/End: Original strand, 78405 - 78556
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataattcatataatgtatatacaattatataacagtagcagcaacatta 142  Q
    |||||||||||||||||| ||||||||||||||||||||| || |||    ||||||||| ||||| ||||||| |||||| ||| ||  | |||||| |    
T  78405 tcatgatataacaatatc-aatgcaaatcaacaacatctc-aacatcgtttataattcatgtaatgcatatacatttatatcacattattaacaacatca 78502  T
Q  143 gaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtt 196  Q
     |  |||||||||| | |||||||||||||||||| || ||||  |||||||||    
T  78503 aatcatataattcaggcttactgaaacaacaacagtaagataagcaacttagtt 78556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 360
Target Start/End: Original strand, 80716 - 80788
Alignment:
Q  288 ttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||| | |||| |||||||| ||| |  || ||| |||||||||||||||||||||||||||||||||||    
T  80716 ttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcactcaaaa 80788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 289 - 360
Target Start/End: Complemental strand, 128636 - 128565
Alignment:
Q  289 taaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||| |||||| |||||||| ||| ||  | ||| ||||||||||||||||||| |||||||||| ||||    
T  128636 taaacttttccaggttcaatctcaatctcataacttgcctaatcattattatacatattcaggcacttaaaa 128565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 266
Target Start/End: Complemental strand, 128777 - 128735
Alignment:
Q  224 agctcgcgaggcgagggcctctactcgccattgcgagttcagg 266  Q
    ||||||||||||||| |||||||||||| || |||||||||||    
T  128777 agctcgcgaggcgagagcctctactcgctatggcgagttcagg 128735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2014 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold2014
Description:

Target: scaffold2014; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 1070 - 1158
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    ||||||||||||||||||| |||| |||| |||||||||| || ||||||||||||||||| ||| | ||||| |||||||||||||||    
T  1070 cttagttaaataacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatacgaatcatcaacatctcaaatat 1158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 203 - 360
Target Start/End: Original strand, 9368 - 9526
Alignment:
Q  203 caaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctc-taaattcgttcttaaact-attcca 300  Q
    ||||||||||||||| ||| |||||||||||||||| ||||||||||||||| |||||||||||| ||  || |  |||||| ||| ||||||  |||||    
T  9368 caaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggttcagttcacaaaaattcattc-taaactctttcca 9466  T
Q  301 gattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    | | |||||| | | | || |||||||||||| |||||| || |||||||||||||||||    
T  9467 ggtccaatctcactctacattctttcctaatcgttattagacttgttcaggcactcaaaa 9526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 78
Target Start/End: Original strand, 9136 - 9193
Alignment:
Q  21 caacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaac 78  Q
    |||| |||| ||||||||| ||||||||||||||||||||||||||||| ||| ||||    
T  9136 caacataggcagtatgcaactcatcatgatataacaatatcgaatgcaattcatcaac 9193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 12606 - 12803
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaata--tcaacataat 98  Q
    |||||||||  |||||||| |||| |||| |||||||||| || ||||||||||||||||| ||||||| ||| ||||||||||||||  |  | |||||    
T  12606 cttagttaataaacaaacagcaacataggcagtatgcaaaacagcatgatataacaatatcaaatgcaagtcatcaacatctcaaatacttatatataat 12705  T
Q  99 tcatataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagttt 197  Q
    |||  |||||||||||||||||||| ||| ||  | |||||| | |  ||| |  | |   ||||||||||||||||||||| ||||| ||||||||||    
T  12706 tca-gtaatgtatatacaattatatcacattataaacaacatcaaataatacacattagacttactgaaacaacaacagcaagataaacaacttagttt 12803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 360
Target Start/End: Complemental strand, 15349 - 15286
Alignment:
Q  297 tccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||| | | | || ||||||||||||||||||| |||| |||||||||||||||    
T  15349 tccagattcaatctcattctacattctttcctaatcattattaaacatattcaggcactcaaaa 15286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 285 - 360
Target Start/End: Original strand, 227867 - 227942
Alignment:
Q  285 ttcttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||| |||||||| ||| |  ||||||||||||||||||||||||||||| ||||||||||||    
T  227867 ttcttaaactattccaggttcaatctcaatctagaatctttcctaatcattattatacatgtttaggcactcaaaa 227942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 225475 - 225568
Alignment:
Q  31 agtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaata-tca-acataattcatataatgtatatacaattatat 123  Q
    |||||||||| || | |||||||| |||||| ||||||| |||||||||||||||| | ||| | ||||||||  ||||| ||||||||||||||    
T  225475 agtatgcaaaacagcgtgatataataatatcaaatgcaa-tcaacaacatctcaaacattcatatataattcaagtaatgcatatacaattatat 225568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 38354 - 38555
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatca--tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataa 97  Q
    |||||||||  |||||||| |||| |||| |||||  ||| ||  ||||||||| |||||||| ||||||| |||||||||||||||| |||| | ||||    
T  38354 cttagttaatgaacaaacagcaacataggcagtatataaaacagctcatgatatgacaatatcaaatgcaattcaacaacatctcaaacatcatatataa 38453  T
Q  98 ttcatataatgtatatacaattatataacagtagcagcaacattagaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagttt 197  Q
    ||||| ||||| |||||||  ||||| ||| ||    |||||| | |  |||||||||| | |||||||||||||||||| || ||||  ||||||||||    
T  38454 ttcatgtaatgcatatacatatatatcacattaatctcaacatcaaatcatataattcaggcttactgaaacaacaacagtaagataagcaacttagttt 38553  T
Q  198 ct 199  Q
    ||    
T  38554 ct 38555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1351 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold1351
Description:

Target: scaffold1351; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 44 - 199
Target Start/End: Original strand, 87 - 243
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatataacagtagcagcaacatta 142  Q
    ||||||||||||||||||  ||||||||||| ||||||||||| |||| | ||||||||| ||||| ||||||| |||||||||| ||  | |||||| |    
T  87 tcatgatataacaatatcagatgcaaatcaataacatctcaaacatcatatataattcatgtaatgcatatacatttatataacattattaacaacatca 186  T
Q  143 gaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
     |  || ||||| | | |||||||||||||||||| || |||   ||||||||||||    
T  187 aatcatttaatttaggcttactgaaacaacaacagtaagatatgcaacttagtttct 243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 38785 - 38697
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    ||||||||||||||||||| |||| |||  |||||||||| || ||||||||||||||||| ||||||| ||| ||| |||||||||||    
T  38785 cttagttaaataacaaacagcaacatagacagtatgcaaaacaacatgatataacaatatcaaatgcaagtcatcaatatctcaaatat 38697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 44 - 123
Target Start/End: Original strand, 97088 - 97168
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatat 123  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||| | ||||||||| ||||| |||||||| |||||    
T  97088 tcatgatataacaatatcaaatgcaaatcaacaacatctcaaacatcatatataattcatgtaatgcatatacaaatatat 97168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 44 - 123
Target Start/End: Original strand, 106366 - 106446
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatat 123  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||| | ||||||||| ||||| |||||||| |||||    
T  106366 tcatgatataacaatatcaaatgcaaatcaacaacatctcaaacatcatatataattcatgtaatgcatatacaaatatat 106446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 47; Significance: 9e-18; HSPs: 3)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 25144 - 25268
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatca--tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataa 97  Q
    |||||||||  |||||||| |||| |||| |||||  ||| ||  |||||||||||| ||||| |||||||||||||||||||||||| |||| | ||||    
T  25144 cttagttaataaacaaacagcaacataggcagtatataaaacagctcatgatataacgatatc-aatgcaaatcaacaacatctcaaacatcatatataa 25242  T
Q  98 ttcatataatgtatatacaattatat 123  Q
    ||||| |||||||||||||| |||||    
T  25243 ttcatgtaatgtatatacaaatatat 25268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 123
Target Start/End: Original strand, 619 - 698
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatat 123  Q
    |||||||||||||||||| || ||||||||| ||||||||||| |||| | ||||||||| ||||| ||||||| ||||||    
T  619 tcatgatataacaatatc-aaagcaaatcaataacatctcaaacatcatatataattcatgtaatgcatatacatttatat 698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 360
Target Start/End: Original strand, 25560 - 25632
Alignment:
Q  288 ttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||| |||||  |||||||| ||| |  || ||| ||||||||||||||||||| |||||||||||||||    
T  25560 ttaaacttttccaagttcaatctcaatctaaaaacttgcctaatcattattatacattttcaggcactcaaaa 25632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 198 - 360
Target Start/End: Complemental strand, 1910 - 1748
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaa--ttcgttcttaaacta 295  Q
    ||||||||| |||||||||||||| |  ||||||||||||| |||||| |||||||| |||| ||||||| ||  | || |||  ||| |||| |||       
T  1910 ctaaacaag-cattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgaattcaggt-cagatttccaaagtttcattctaaaatct 1813  T
Q  296 ttccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||| |||||||| | | | || ||||||||||||||||||| ||||||||||||||||||||    
T  1812 ttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaa 1748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 291 - 360
Target Start/End: Original strand, 12376 - 12445
Alignment:
Q  291 aactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||| |||||||| ||| |  |||||||||||||||||||||||||||||||| |||||||||    
T  12376 aactattccaggttcaatctcaatctaaaatctttcctaatcattattatacatgttcagacactcaaaa 12445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 32 - 142
Target Start/End: Complemental strand, 2494 - 2386
Alignment:
Q  32 gtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatc-aacataattcatataatgtatatacaattatataacagta 130  Q
    ||||||||| ||||||||||||| ||||||||||| |||||| |||   ||||| |||| ||| ||| |||| |||||||||||||||||||||||| ||    
T  2494 gtatgcaaaccatcatgatataataatatcgaatgtaaatcagcaa---ctcaattatcaaacttaagtcatttaatgtatatacaattatataacatta 2398  T
Q  131 gcagcaacatta 142  Q
      ||||||||||    
T  2397 taagcaacatta 2386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 2155 - 2116
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  2155 tctttcctaatcattattagacatgttcaggcactcaaaa 2116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 11502 - 11626
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaat-atca-acataat 98  Q
    ||||||||| |||||| || |||| |||| |||||||||| ||||||||||||| ||||||| | | || | ||||||||||||||| |||| | |||||    
T  11502 cttagttaattaacaatcagcaacataggcagtatgcaaaacatcatgatataataatatcgcacgtaagtaaacaacatctcaaataatcacatataat 11601  T
Q  99 tcatataatgtatatacaattatat 123  Q
    |||  ||||| ||||||||||||||    
T  11602 tcaagtaatgcatatacaattatat 11626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 226 - 360
Target Start/End: Complemental strand, 28615 - 28480
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaatt-cgttcttaaactattcc-agattcaatcttaatttccaatct 323  Q
    ||||||||||||| |||||| |||||||| |||||||||||| ||  || | ||||| | |||| ||| | |||  || |||||||| | | ||||||||    
T  28615 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttcacaaaatttcattct-aaagtcttcgtaggttcaatctcattctccaatct 28517  T
Q  324 ttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||||| ||||||||||||||||||||    
T  28516 ttcctaatcattattagacatgttcaggcactcaaaa 28480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 39515 - 39602
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    |||||||||||||||| ||||||| |||| ||||| |||| || ||||| |||| |||||| ||||||| |||||||||||||||||||    
T  39515 cttagttaaataacaa-caacaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatat 39602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 38339 - 38215
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaat-atca-acataat 98  Q
    ||||||||| |||||| || |||| |||| |||||||||| ||||||||||||| ||||||| | | || | ||||||||||||||| |||| | |||||    
T  38339 cttagttaattaacaatcagcaacataggcagtatgcaaaacatcatgatataataatatcgcacgtaagtaaacaacatctcaaataatcacatataat 38240  T
Q  99 tcatataatgtatatacaattatat 123  Q
    |||  ||||| ||||||||||||||    
T  38239 tcaagtaatgcatatacaattatat 38215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 358
Target Start/End: Complemental strand, 24361 - 24324
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaa 358  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  24361 tctttcctaatcaatattagacatgttcaggcactcaa 24324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 24457 - 24417
Alignment:
Q  225 gctcgcgaggcgagggcctctactcgccattgcgagttcag 265  Q
    |||||||||||||| |||||| |||||||| ||||||||||    
T  24457 gctcgcgaggcgagagcctctgctcgccatggcgagttcag 24417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 75297 - 75210
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    |||||||||||||||| ||||||| |||| ||||| |||| || ||||| |||| |||||| ||||||| |||||||||||||||||||    
T  75297 cttagttaaataacaa-caacaacataggcagtatacaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatat 75210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 18110 - 17986
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatcaac--ataat 98  Q
    ||||||||| |||||| || |||| || | | |||||| | ||||||||||||| ||||||||| |||| | |||||||||||||||||  ||  |||||    
T  18110 cttagttaattaacaatcagcaacatatgcattatgcacaacatcatgatataataatatcgaacgcaagtaaacaacatctcaaatattcacatataat 18011  T
Q  99 tcatataatgtatatacaattatat 123  Q
    |||  ||||| ||||||||||||||    
T  18010 tcaagtaatgcatatacaattatat 17986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 355
Target Start/End: Complemental strand, 6538 - 6504
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcact 355  Q
    ||||||||||||||||||| |||||||||||||||    
T  6538 tctttcctaatcattattagacatgttcaggcact 6504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 3233 - 3146
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    |||||||||||||||| || |||| |||| ||||| |||| || ||||| |||| |||||| ||||||| |||||||||||||||||||    
T  3233 cttagttaaataacaa-cagcaacataggcagtatacaaaacaacatgacataataatatcaaatgcaagtcaacaacatctcaaatat 3146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 360
Target Start/End: Complemental strand, 745 - 684
Alignment:
Q  299 cagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||| | | | || ||||||||||||||||||| ||||||||||||||||||||    
T  745 cagattcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaa 684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0627 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 315 - 358
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  315 tctttcctaatcattattagacatgttcaggcactcaaaaacat 358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 5834 - 5792
Alignment:
Q  318 caatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  5834 caatctttcctaatcattattagacatgttcaggcactcaaaa 5792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 675 - 633
Alignment:
Q  318 caatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  675 caatctttcctaatcattattagacatgttcaggcactcaaaa 633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 364
Target Start/End: Complemental strand, 2029 - 1968
Alignment:
Q  303 ttcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    |||||||| | | |||||||||||||||||||||||| ||||||||||  ||||||||||||    
T  2029 ttcaatctcattctccaatctttcctaatcattattagacatgttcagtgactcaaaaacat 1968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 117
Target Start/End: Complemental strand, 2303 - 2261
Alignment:
Q  75 caacatctcaaatatcaacataattcatataatgtatatacaa 117  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||    
T  2303 caacatctcgaatatcaacataatccatttaatgtatatacaa 2261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 85
Target Start/End: Complemental strand, 1836 - 1795
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaa 85  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  1836 tcatgatataacaatatcaaatgcaaatcaacaacatctcaa 1795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 310 - 375
Alignment:
Q  295 attccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||||| |   | || ||||||||||||||||||| ||||||||||||||||||||    
T  310 attccagattcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaa 375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 295 - 360
Target Start/End: Original strand, 5086 - 5151
Alignment:
Q  295 attccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||||| |   | || ||||||||||||||||||| ||||||||||||||||||||    
T  5086 attccagattcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaa 5151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 360
Target Start/End: Original strand, 39145 - 39209
Alignment:
Q  296 ttccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||| |||||||| | | | || ||||||||||||||||||| ||||||||||||||||||||    
T  39145 ttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaa 39209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 226 - 360
Target Start/End: Original strand, 17095 - 17230
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaattcg-ttcttaaa-ctattccagattcaatcttaatttccaatct 323  Q
    ||||||||||||| |||||| |||||||| ||||||||||||   | |||| || ||   |||| ||| |||| |||| |||||||| | | | || |||    
T  17095 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcatattctcaaagttttattctaaaatctat-ccaggttcaatctcattctacattct 17193  T
Q  324 ttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||||| ||||||||||||||||||||    
T  17194 ttcctaatcattattaaacatgttcaggcactcaaaa 17230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 37; Significance: 0.000000000008; HSPs: 3)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 199
Target Start/End: Complemental strand, 19923 - 19768
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatataacagtagcagcaacatta 142  Q
    |||||||||||||||||| ||||||| ||||||||||||| |  |||| | |||| |||| ||||| ||||||| |||||| ||| ||  |  ||||| |    
T  19923 tcatgatataacaatatcaaatgcaattcaacaacatctc-agcatcataaataactcatgtaatgcatatacatttatatcacattattaataacatca 19825  T
Q  143 gaatatataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
     |  |||||||||| | |||||| ||||||||||| || ||||  ||||||||||||    
T  19824 aatcatataattcatgcttactggaacaacaacagtaagataagcaacttagtttct 19768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 40227 - 40268
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggt 267  Q
    ||||||||||||| ||||||||||||| | ||||||||||||    
T  40227 ctcgcgaggcgagagcctctactcgccgtggcgagttcaggt 40268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 360
Target Start/End: Original strand, 40325 - 40361
Alignment:
Q  324 ttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||| || ||||||||||||||||||||    
T  40325 ttcctaatcattaataaacatgttcaggcactcaaaa 40361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 288 - 360
Target Start/End: Complemental strand, 24263 - 24191
Alignment:
Q  288 ttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||| |||||||| ||| |  || ||| |||||||||||||||| || |||||||||||||||    
T  24263 ttaaactattccaggttcaatctcaatctaaaagcttgcctaatcattattatatatattcaggcactcaaaa 24191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 37; Significance: 0.000000000008; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 296 - 360
Target Start/End: Complemental strand, 16950 - 16886
Alignment:
Q  296 ttccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||| |||||||| | | | || ||||||||||||||||||| ||||||||||||||||||||    
T  16950 ttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaa 16886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 79162 - 79106
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccatt 255  Q
    ||||||||||| |||||||| |||  | ||||||||||||| ||||||||||||||||    
T  79162 ctaaacaaggc-ttctgtaattgggcaactcgcgaggcgagagcctctactcgccatt 79106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 360
Target Start/End: Complemental strand, 79069 - 79033
Alignment:
Q  324 ttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||||| ||||||||| ||||||||||    
T  79069 ttcctaatcattattaaacatgttcatgcactcaaaa 79033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 37; Significance: 0.000000000008; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 40262 - 40306
Alignment:
Q  316 tccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||    
T  40262 tccattctttcctaatcattattagacatgttcaggcactcaaaa 40306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 25934 - 26021
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    ||||||||||||||||  | |||| |||| ||||| ||||  ||||||| |||| |||||| ||||||| | |||||||||||||||||    
T  25934 cttagttaaataacaat-agcaacataggcagtatacaaaatatcatgacataataatatcaaatgcaagtaaacaacatctcaaatat 26021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 39896 - 39983
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaatcatcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    ||||||||||||||||  | |||| |||| ||||| ||||  ||||||| |||| |||||| ||||||| | |||||||||||||||||    
T  39896 cttagttaaataacaat-agcaacataggcagtatacaaaatatcatgacataataatatcaaatgcaagtaaacaacatctcaaatat 39983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 360
Target Start/End: Complemental strand, 39666 - 39602
Alignment:
Q  296 ttccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||| |||||||| | | | || |||||||||||||||| || ||||||||||| ||||||||    
T  39666 ttccaggttcaatctcattctacattctttcctaatcattaatagacatgttcaggtactcaaaa 39602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 44 - 123
Target Start/End: Original strand, 267743 - 267822
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatat 123  Q
    |||||||||||||||||| ||||||||||||||| ||||| || |||| | ||||||||| ||||| ||||||| ||||||    
T  267743 tcatgatataacaatatcaaatgcaaatcaacaatatctc-aacatcatatataattcatgtaatgcatatacatttatat 267822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 288 - 355
Target Start/End: Original strand, 268106 - 268173
Alignment:
Q  288 ttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcact 355  Q
    ||||||| | |||| |||||||| ||| |  || ||| ||||||||||||||||||||||||||||||    
T  268106 ttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatgttcaggcact 268173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 770 - 731
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  770 tctttcctaatcattattagacatgttcaggcactcaaaa 731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1419 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 262
Target Start/End: Original strand, 335 - 374
Alignment:
Q  223 tagctcgcgaggcgagggcctctactcgccattgcgagtt 262  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  335 tagctcgcgaggcgagggcctctactcgccatggcgagtt 374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 2795 - 2756
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  2795 tctttcctaatcattattagacatgttcaggcactcaaaa 2756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 10147 - 10108
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  10147 tctttcctaatcattattagacatgttcaggcactcaaaa 10108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 13318 - 13279
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  13318 tctttcctaatcattattagacatgttcaggcactcaaaa 13279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 17718 - 17679
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  17718 tctttcctaatcattattagacatgttcaggcactcaaaa 17679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 16679 - 16718
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  16679 tctttcctaatcattattagacatgttcaggcactcaaaa 16718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 20814 - 20853
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  20814 tctttcctaatcattattagacatgttcaggcactcaaaa 20853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 18668 - 18629
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  18668 tctttcctaatcattattagacatgttcaggcactcaaaa 18629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 11234 - 11195
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  11234 tctttcctaatcattattagacatgttcaggcactcaaaa 11195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 360
Target Start/End: Original strand, 14055 - 14089
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| |||||||||||||||    
T  14055 cctaatcattattatacatattcaggcactcaaaa 14089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 16309 - 16270
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  16309 tctttcctaatcattattagacatgttcaggcactcaaaa 16270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 16406 - 16365
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggt 267  Q
    ||||||||||||| |||||| |||||||| ||||||||||||    
T  16406 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggt 16365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 25775 - 25736
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  25775 tctttcctaatcattattagacatgttcaggcactcaaaa 25736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 44790 - 44702
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaat-catcatgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    |||||||||||||||| || ||||  ||| ||||| ||||  || ||||| |||| |||||| ||||||| |||||||||||||||||||    
T  44790 cttagttaaataacaa-cagcaacacaggcagtatacaaaaacagcatgacataataatatcaaatgcaagtcaacaacatctcaaatat 44702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 357
Target Start/End: Complemental strand, 33204 - 33168
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactca 357  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  33204 tctttcctaatcattattagacatgtccaggcactca 33168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 8242 - 8203
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  8242 tctttcctaatcattattagacatgttcaggcactcaaaa 8203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 16498 - 16537
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  16498 tctttcctaatcattattagacatgttcaggcactcaaaa 16537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 226 - 360
Target Start/End: Complemental strand, 32765 - 32630
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaa-ttcgttcttaaactattccagattcaatcttaatttccaatctt 324  Q
    ||||||||||| | |||||| |||||  | |||||||  |||||||||| | ||| ||| |||| |||   || ||| |||||||| | | |||| || |    
T  32765 ctcgcgaggcgggagcctctcctcgctgtggcgagttagggtgcaactcacaaaaattcattctaaaatctttacaggttcaatctcattctccagtcct 32666  T
Q  325 tcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||| |||||||||| |||||||||    
T  32665 tcctaatcattattagacatgttcagacactcaaaa 32630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 226 - 360
Target Start/End: Original strand, 46240 - 46375
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaa-ttcgttcttaaactattccagattcaatcttaatttccaatctt 324  Q
    ||||||||||| | |||||| |||||  | |||||||  |||||||||| | ||| ||| |||| |||   || ||| |||||||| | | |||| || |    
T  46240 ctcgcgaggcgggagcctctcctcgctgtggcgagttagggtgcaactcacaaaaattcattctaaaatctttacaggttcaatctcattctccagtcct 46339  T
Q  325 tcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||| |||||||||| |||||||||    
T  46340 tcctaatcattattagacatgttcagacactcaaaa 46375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 2262 - 2301
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  2262 tctttcctaatcattattagacatgttcaggcactcaaaa 2301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 360
Target Start/End: Complemental strand, 119255 - 119222
Alignment:
Q  327 ctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||||||| |||||||||||||||    
T  119255 ctaatcattattatacatattcaggcactcaaaa 119222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 225 - 265
Target Start/End: Complemental strand, 207325 - 207285
Alignment:
Q  225 gctcgcgaggcgagggcctctactcgccattgcgagttcag 265  Q
    |||||||||||||| |||||| |||||||| ||||||||||    
T  207325 gctcgcgaggcgagagcctctgctcgccatggcgagttcag 207285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 52323 - 52362
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  52323 tctttcctaatcattattagacatgttcaggcactcaaaa 52362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 167700 - 167661
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  167700 tctttcctaatcattattagacatgttcaggcactcaaaa 167661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 4852 - 4814
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaa 359  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  4852 tctttcctaatcattattagacatgttcaggcactcaaa 4814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 322 - 360
Target Start/End: Original strand, 13896 - 13934
Alignment:
Q  322 ctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  13896 ctttcctaatcattattagacatgttcaggcactcaaaa 13934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 23293 - 23331
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaa 359  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  23293 tctttcctaatcattattagacatgttcaggcactcaaa 23331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 360
Target Start/End: Complemental strand, 20228 - 20097
Alignment:
Q  229 gcgaggcgagggcctctactcgccattgcgagttcaggtgcaactctctaaa--ttcgttcttaaactattccagattcaatcttaatttccaatctttc 326  Q
    |||||||||| ||||||||||||||| |||||||||||| || ||  | |||  ||| ||||| || || ||||| |||||||| | | | || ||||||    
T  20228 gcgaggcgagagcctctactcgccatggcgagttcaggt-cagcttccaaaaagttcattctt-aattaatccaggttcaatctcattctacattctttc 20131  T
Q  327 ctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||| ||||||||| ||||||||||| ||||||||    
T  20130 ctactcattattaaacatgttcaggaactcaaaa 20097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 323 - 360
Target Start/End: Complemental strand, 24010 - 23973
Alignment:
Q  323 tttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  24010 tttcctaatcattattagacatgttcaggcactcaaaa 23973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 33; Significance: 0.000000002; HSPs: 6)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 360
Target Start/End: Original strand, 4894 - 4958
Alignment:
Q  296 ttccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||| |||||||| | | | || ||||| ||||||||||||| ||||||||||||||||||||    
T  4894 ttccaggttcaatctcattctacattcttttctaatcattattagacatgttcaggcactcaaaa 4958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 360
Target Start/End: Original strand, 12476 - 12540
Alignment:
Q  296 ttccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||| |||||||| | | | || ||||| ||||||||||||| ||||||||||||||||||||    
T  12476 ttccaggttcaatctcattctacattcttttctaatcattattagacatgttcaggcactcaaaa 12540  T

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Target: scaffold0228; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 360
Target Start/End: Original strand, 22428 - 22492
Alignment:
Q  296 ttccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||| |||||||| | | | || ||||| ||||||||||||| ||||||||||||||||||||    
T  22428 ttccaggttcaatctcattctacattcttttctaatcattattagacatgttcaggcactcaaaa 22492  T

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Target: scaffold0228; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 4589 - 4633
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    ||||| |||| |||||| ||||||| |||||||||||||||||||    
T  4589 catgacataataatatcaaatgcaagtcaacaacatctcaaatat 4633  T

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Target: scaffold0228; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 12171 - 12215
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    ||||| |||| |||||| ||||||| |||||||||||||||||||    
T  12171 catgacataataatatcaaatgcaagtcaacaacatctcaaatat 12215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 22123 - 22167
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    ||||| |||| |||||| ||||||| |||||||||||||||||||    
T  22123 catgacataataatatcaaatgcaagtcaacaacatctcaaatat 22167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Complemental strand, 773 - 734
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  773 tctttcctaatcattattagacatattcaggcactcaaaa 734  T

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Target: scaffold0347 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 265
Target Start/End: Original strand, 316 - 383
Alignment:
Q  198 ctaaacaaggcattctgtaa--ctggttagctcgcgaggcgagggcctctactcgccattgcgagttcag 265  Q
    ||||||||||||||||||||  || ||  |||||||||||||| |||||| |||||||| ||||||||||    
T  316 ctaaacaaggcattctgtaatactagt--gctcgcgaggcgagagcctctgctcgccatggcgagttcag 383  T

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Target: scaffold0347; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 358
Target Start/End: Original strand, 439 - 476
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaa 358  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  439 tctttcctaatcaatattagacatgttcaggcactcaa 476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 32; Significance: 0.000000008; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 753 - 792
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  753 tcttttctaatcattattagacatgttcaggcactcaaaa 792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 3881 - 3920
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| |||||||||| |||||||||    
T  3881 tctttcctaatcattattagacatgttcagacactcaaaa 3920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 13611 - 13650
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  13611 tctttcctaatcattattagacattttcaggcactcaaaa 13650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 198 - 265
Target Start/End: Original strand, 10198 - 10265
Alignment:
Q  198 ctaaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccattgcgagttcag 265  Q
    |||||||||||||||||||||      |||||||||||||| |||||| |||||||| ||||||||||    
T  10198 ctaaacaaggcattctgtaacacaagtgctcgcgaggcgagagcctctgctcgccatggcgagttcag 10265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 10555 - 10594
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  10555 tctttcctaatcattattagacatgttcatgcactcaaaa 10594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 32; Significance: 0.000000008; HSPs: 3)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 28947 - 28986
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| ||||||||||| ||||||||    
T  28947 tctttcctaatcattattagacatgttcaggaactcaaaa 28986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 360
Target Start/End: Complemental strand, 1407 - 1374
Alignment:
Q  327 ctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||| |||||||||||||||||||||||    
T  1407 ctaatcattaatatacatgttcaggcactcaaaa 1374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 27912 - 27956
Alignment:
Q  45 catgatataacaatatcgaatgcaaatcaacaacatctcaaatat 89  Q
    ||||| |||| |||||| ||||||| |||||||||||||||||||    
T  27912 catgacataataatatcaaatgcaagtcaacaacatctcaaatat 27956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 360
Target Start/End: Original strand, 32464 - 32503
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  32464 tctttcctagtcattattagacatgttcaggcactcaaaa 32503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 21301 - 21344
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    |||||| |||||||||||| ||||||||||||||| ||||||||    
T  21301 tctttcataatcattattagacatgttcaggcactaaaaaacat 21344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1403 (Bit Score: 31; Significance: 0.00000003; HSPs: 3)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 223 - 261
Target Start/End: Original strand, 862 - 900
Alignment:
Q  223 tagctcgcgaggcgagggcctctactcgccattgcgagt 261  Q
    |||||||||||| ||||||||||||||||||| ||||||    
T  862 tagctcgcgaggtgagggcctctactcgccatggcgagt 900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1403; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 633 - 669
Alignment:
Q  44 tcatgatataacaatatcgaatgcaaatcaacaacatc 81  Q
    |||||||||||||||||| |||||||||||||||||||    
T  633 tcatgatataacaatatc-aatgcaaatcaacaacatc 669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1403; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 199
Target Start/End: Original strand, 735 - 787
Alignment:
Q  147 atataattcaagtttactgaaacaacaacagcaaaataaataacttagtttct 199  Q
    |||||||||| | ||||||||||||||||||  | ||||| ||||||||||||    
T  735 atataattcaggcttactgaaacaacaacagttagataaacaacttagtttct 787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 2261 - 2307
Alignment:
Q  318 caatctttcctaatcattattatacatgttcaggcactcaaaaacat 364  Q
    ||||||||||||||||||| | | ||| |||||||||||||||||||    
T  2261 caatctttcctaatcattagtgtgcatcttcaggcactcaaaaacat 2307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 12519 - 12481
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaa 359  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  12519 tctttcctaatcaatattagacatgttcaggcactcaaa 12481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 360
Target Start/End: Complemental strand, 35575 - 35541
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||||||||||||||| |||||||||||||||    
T  35575 cctaatcattattatacatattcaggcactcaaaa 35541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 360
Target Start/End: Complemental strand, 55313 - 55279
Alignment:
Q  326 cctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||| ||||||||||||||||||||||||    
T  55313 cctaatcattcttatacatgttcaggcactcaaaa 55279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Original strand, 51979 - 52017
Alignment:
Q  321 tctttcctaatcattattatacatgttcaggcactcaaa 359  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  51979 tctttcctaatcattattagacttgttcaggcactcaaa 52017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 322 - 360
Target Start/End: Original strand, 332804 - 332842
Alignment:
Q  322 ctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  332804 ctttcctaatcattcttatacatattcaggcactcaaaa 332842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 3269 - 3185
Alignment:
Q  1 cttagttaaataacaaacaacaacgtaggtagtatgcaaat-catcatgatataacaatatcgaatgcaaatcaacaacatctcaa 85  Q
    |||||||||||||||| || |||| |||| ||||| ||||  || |||||||||| |||||| |||| || |||||||||||||||    
T  3269 cttagttaaataacaa-cagcaacataggcagtatacaaaaacagcatgatataataatatcaaatgtaattcaacaacatctcaa 3185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 12244 - 12285
Alignment:
Q  226 ctcgcgaggcgagggcctctactcgccattgcgagttcaggt 267  Q
    ||||||||| ||| ||||||||||||||| ||||||||||||    
T  12244 ctcgcgaggtgagagcctctactcgccatggcgagttcaggt 12285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 4888 - 4968
Alignment:
Q  2 ttagttaaataacaaacaacaacgtaggtagtatgcaaa-tcatcatgatataacaatatcgaatgcaaatcaacaacatct 82  Q
    ||||||||||||||| || |||| |||| ||||| |||| ||| ||||| |||| |||||| ||||||| ||||||||||||    
T  4888 ttagttaaataacaa-cagcaacataggcagtatacaaaatcagcatgacataataatatcaaatgcaattcaacaacatct 4968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 360
Target Start/End: Original strand, 7108 - 7180
Alignment:
Q  288 ttaaactattccagattcaatcttaatttccaatctttcctaatcattattatacatgttcaggcactcaaaa 360  Q
    ||||||| | |||| |||||||| ||| |  || ||| ||||||||||||||||||| ||||| |||||||||    
T  7108 ttaaactttcccaggttcaatctcaatctaaaaacttgcctaatcattattatacatattcagtcactcaaaa 7180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 39337 - 39413
Alignment:
Q  48 gatataacaatatcgaatgcaaatcaacaacatctcaaatatca-acataattcatataatgtatatacaattatat 123  Q
    |||||||||||||| ||||  ||||||||||| || ||| |||| | |||||||| |||||| |||||||| |||||    
T  39337 gatataacaatatcaaatgataatcaacaacaacttaaacatcatatataattcacataatgcatatacaaatatat 39413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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