View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3468_low_15 (Length: 234)

Name: NF3468_low_15
Description: NF3468
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3468_low_15
NF3468_low_15
[»] scaffold0328 (2 HSPs)
scaffold0328 (9-144)||(6712-6849)
scaffold0328 (9-144)||(6152-6288)
[»] chr7 (49 HSPs)
chr7 (9-147)||(13863310-13863450)
chr7 (9-144)||(44599489-44599626)
chr7 (9-145)||(13863875-13864011)
chr7 (29-145)||(44600073-44600190)
chr7 (9-147)||(8643684-8643823)
chr7 (9-147)||(46816229-46816368)
chr7 (39-146)||(10533032-10533140)
chr7 (39-144)||(37888833-37888939)
chr7 (66-146)||(37889235-37889315)
chr7 (39-145)||(20419272-20419379)
chr7 (39-145)||(22740155-22740262)
chr7 (66-145)||(37972372-37972451)
chr7 (66-144)||(9035269-9035347)
chr7 (54-147)||(9412288-9412382)
chr7 (66-144)||(13741557-13741635)
chr7 (39-144)||(29293294-29293400)
chr7 (66-148)||(37971956-37972038)
chr7 (66-147)||(20418885-20418966)
chr7 (39-145)||(3205041-3205148)
chr7 (39-144)||(3687604-3687710)
chr7 (39-145)||(17156966-17157073)
chr7 (39-141)||(18863970-18864073)
chr7 (39-145)||(29292921-29293028)
chr7 (39-147)||(9034864-9034974)
chr7 (39-144)||(36527746-36527852)
chr7 (66-145)||(13744209-13744287)
chr7 (39-145)||(38826861-38826968)
chr7 (9-117)||(46815195-46815304)
chr7 (39-146)||(18864350-18864457)
chr7 (68-144)||(48359320-48359395)
chr7 (90-145)||(9412022-9412077)
chr7 (66-141)||(22740567-22740641)
chr7 (66-116)||(3204695-3204745)
chr7 (83-148)||(13772637-13772702)
chr7 (39-146)||(42418976-42419084)
chr7 (90-144)||(13772901-13772955)
chr7 (39-112)||(48359606-48359680)
chr7 (88-145)||(16198975-16199032)
chr7 (88-145)||(30857902-30857959)
chr7 (91-144)||(38191566-38191619)
chr7 (96-147)||(23686723-23686774)
chr7 (82-125)||(35080215-35080258)
chr7 (66-145)||(42418590-42418669)
chr7 (93-143)||(5735253-5735303)
chr7 (91-153)||(6908204-6908265)
chr7 (81-144)||(5349724-5349784)
chr7 (92-153)||(18925053-18925114)
chr7 (90-142)||(34235978-34236030)
chr7 (76-116)||(36527411-36527451)
[»] chr6 (27 HSPs)
chr6 (9-146)||(33829553-33829692)
chr6 (29-144)||(33828990-33829106)
chr6 (39-144)||(33974247-33974353)
chr6 (39-144)||(10087806-10087912)
chr6 (39-146)||(3403936-3404045)
chr6 (39-144)||(18242103-18242210)
chr6 (83-154)||(3403707-3403778)
chr6 (39-145)||(7654496-7654603)
chr6 (66-141)||(32733972-32734047)
chr6 (66-144)||(22684334-22684411)
chr6 (66-144)||(22754657-22754734)
chr6 (66-143)||(22755065-22755142)
chr6 (68-145)||(29074350-29074426)
chr6 (68-145)||(29079114-29079190)
chr6 (68-145)||(29106923-29106999)
chr6 (90-146)||(10039674-10039729)
chr6 (54-145)||(21031978-21032069)
chr6 (66-145)||(2354786-2354865)
chr6 (90-145)||(18241853-18241908)
chr6 (39-147)||(30388311-30388419)
chr6 (90-144)||(11656782-11656836)
chr6 (90-147)||(13579651-13579707)
chr6 (95-146)||(21032285-21032336)
chr6 (90-145)||(33655115-33655169)
chr6 (39-144)||(2354409-2354514)
chr6 (66-116)||(13176647-13176697)
chr6 (91-145)||(31598274-31598327)
[»] chr8 (51 HSPs)
chr8 (9-144)||(39723965-39724102)
chr8 (9-147)||(13026632-13026772)
chr8 (9-145)||(9823278-9823416)
chr8 (9-144)||(22851390-22851527)
chr8 (9-133)||(39723413-39723539)
chr8 (9-144)||(3307338-3307475)
chr8 (9-144)||(9822748-9822885)
chr8 (29-141)||(13027219-13027332)
chr8 (9-146)||(13937307-13937445)
chr8 (145-234)||(2967530-2967619)
chr8 (9-145)||(6092776-6092911)
chr8 (12-145)||(13936722-13936853)
chr8 (9-155)||(15042134-15042281)
chr8 (62-142)||(15442765-15442845)
chr8 (39-144)||(41662350-41662457)
chr8 (39-148)||(37396704-37396814)
chr8 (9-75)||(22851903-22851970)
chr8 (39-145)||(24473716-24473823)
chr8 (39-148)||(6199044-6199154)
chr8 (66-145)||(20861614-20861693)
chr8 (66-145)||(41662520-41662599)
chr8 (54-142)||(765736-765825)
chr8 (39-147)||(6198655-6198764)
chr8 (39-147)||(34498503-34498612)
chr8 (54-145)||(12281123-12281215)
chr8 (39-144)||(15156132-15156239)
chr8 (39-145)||(17431286-17431393)
chr8 (62-141)||(34498125-34498204)
chr8 (39-144)||(43245871-43245978)
chr8 (39-116)||(9623530-9623608)
chr8 (62-148)||(15155879-15155965)
chr8 (66-144)||(37397121-37397199)
chr8 (68-147)||(15444625-15444704)
chr8 (92-143)||(22851958-22852009)
chr8 (90-144)||(12281426-12281480)
chr8 (90-144)||(16929242-16929296)
chr8 (66-144)||(24473343-24473421)
chr8 (66-116)||(25439102-25439152)
chr8 (82-144)||(37752084-37752146)
chr8 (90-147)||(16928939-16928996)
chr8 (39-141)||(33727053-33727156)
chr8 (90-145)||(43246176-43246231)
chr8 (82-144)||(23123338-23123400)
chr8 (88-142)||(25438794-25438848)
chr8 (90-144)||(37752416-37752470)
chr8 (68-144)||(16169174-16169249)
chr8 (88-147)||(2856523-2856582)
chr8 (90-125)||(23123517-23123552)
chr8 (91-144)||(3463946-3463999)
chr8 (82-130)||(9930831-9930879)
chr8 (66-142)||(15444213-15444289)
[»] chr5 (51 HSPs)
chr5 (9-147)||(18816949-18817089)
chr5 (9-144)||(18817528-18817665)
chr5 (9-145)||(11350807-11350944)
chr5 (9-146)||(11351346-11351483)
chr5 (39-147)||(12498564-12498673)
chr5 (39-148)||(12498876-12498986)
chr5 (66-147)||(26571140-26571221)
chr5 (39-144)||(18433015-18433122)
chr5 (39-143)||(22729388-22729492)
chr5 (39-146)||(25115755-25115864)
chr5 (39-146)||(25174847-25174956)
chr5 (39-145)||(26020449-26020557)
chr5 (39-141)||(3888610-3888713)
chr5 (66-141)||(21207229-21207304)
chr5 (39-149)||(26570724-26570835)
chr5 (67-146)||(31569905-31569983)
chr5 (39-117)||(42919331-42919410)
chr5 (66-141)||(43463759-43463833)
chr5 (39-144)||(3888239-3888345)
chr5 (39-116)||(19514554-19514632)
chr5 (82-147)||(22429188-22429252)
chr5 (39-147)||(43464140-43464248)
chr5 (47-141)||(2817152-2817247)
chr5 (39-145)||(19514911-19515018)
chr5 (66-145)||(25940520-25940599)
chr5 (66-145)||(37610201-37610279)
chr5 (66-145)||(37780319-37780397)
chr5 (91-144)||(23011079-23011131)
chr5 (62-147)||(25175123-25175208)
chr5 (39-145)||(34147140-34147245)
chr5 (39-145)||(34147458-34147565)
chr5 (66-116)||(11316950-11317000)
chr5 (66-144)||(37780718-37780796)
chr5 (82-147)||(22428931-22428995)
chr5 (39-144)||(22729008-22729112)
chr5 (90-147)||(25116061-25116118)
chr5 (68-116)||(10098919-10098967)
chr5 (65-156)||(5187805-5187896)
chr5 (90-145)||(18433316-18433371)
chr5 (66-116)||(37610594-37610644)
chr5 (94-147)||(16466746-16466799)
chr5 (39-130)||(34576880-34576972)
chr5 (90-146)||(33324838-33324894)
chr5 (66-116)||(10098547-10098597)
chr5 (92-138)||(16726084-16726130)
chr5 (82-144)||(34577156-34577217)
chr5 (66-116)||(41072190-41072240)
chr5 (91-149)||(41382888-41382945)
chr5 (66-143)||(25940990-25941067)
chr5 (66-142)||(2817551-2817626)
chr5 (82-141)||(9665560-9665617)
[»] chr2 (51 HSPs)
chr2 (9-146)||(2639399-2639538)
chr2 (9-141)||(7591204-7591337)
chr2 (9-144)||(26842155-26842292)
chr2 (9-147)||(26841584-26841724)
chr2 (9-145)||(2638819-2638958)
chr2 (29-143)||(18296077-18296192)
chr2 (9-144)||(7591767-7591904)
chr2 (47-145)||(37720203-37720301)
chr2 (39-146)||(30190921-30191030)
chr2 (39-141)||(8851151-8851254)
chr2 (82-145)||(18296685-18296748)
chr2 (9-112)||(38490758-38490863)
chr2 (66-147)||(41790888-41790969)
chr2 (39-146)||(7664246-7664354)
chr2 (9-75)||(18296639-18296707)
chr2 (54-145)||(24832330-24832422)
chr2 (39-153)||(7664621-7664736)
chr2 (66-145)||(8851558-8851637)
chr2 (39-141)||(26692768-26692871)
chr2 (66-144)||(16910827-16910905)
chr2 (38-153)||(5378652-5378768)
chr2 (54-145)||(20347427-20347519)
chr2 (39-145)||(17851350-17851457)
chr2 (66-147)||(7979564-7979643)
chr2 (55-144)||(11883890-11883980)
chr2 (39-116)||(16911217-16911295)
chr2 (66-144)||(17850978-17851055)
chr2 (38-146)||(5379906-5380015)
chr2 (42-142)||(6325298-6325399)
chr2 (39-145)||(6171404-6171511)
chr2 (54-145)||(11883622-11883714)
chr2 (39-141)||(40469676-40469780)
chr2 (66-141)||(5793450-5793525)
chr2 (66-141)||(41790494-41790568)
chr2 (67-137)||(6324924-6324994)
chr2 (66-116)||(18750102-18750152)
chr2 (39-116)||(19141797-19141875)
chr2 (66-116)||(26692424-26692474)
chr2 (90-144)||(26737781-26737835)
chr2 (62-144)||(40469427-40469509)
chr2 (39-121)||(32673090-32673174)
chr2 (69-116)||(7979982-7980029)
chr2 (62-153)||(30191197-30191288)
chr2 (92-148)||(17346037-17346092)
chr2 (90-145)||(26737481-26737534)
chr2 (72-142)||(19141446-19141515)
chr2 (62-144)||(32672842-32672924)
chr2 (92-145)||(6495723-6495776)
chr2 (92-144)||(6171156-6171207)
chr2 (90-146)||(20347161-20347217)
chr2 (92-139)||(40469607-40469655)
[»] chr4 (66 HSPs)
chr4 (9-145)||(36095816-36095953)
chr4 (9-145)||(43051169-43051307)
chr4 (9-144)||(50679341-50679478)
chr4 (9-141)||(36096392-36096526)
chr4 (29-146)||(50678777-50678895)
chr4 (9-150)||(43050601-43050744)
chr4 (9-147)||(45830115-45830253)
chr4 (9-146)||(56505691-56505830)
chr4 (9-146)||(56506491-56506630)
chr4 (9-147)||(47219122-47219258)
chr4 (9-145)||(45828993-45829130)
chr4 (9-144)||(32703568-32703704)
chr4 (39-148)||(28196342-28196452)
chr4 (9-145)||(28196691-28196828)
chr4 (39-144)||(16555764-16555871)
chr4 (39-144)||(4239314-4239420)
chr4 (26-147)||(39744400-39744522)
chr4 (39-146)||(9380689-9380797)
chr4 (9-143)||(11529169-11529305)
chr4 (40-143)||(25161879-25161983)
chr4 (66-145)||(26207722-26207801)
chr4 (66-144)||(169415-169493)
chr4 (39-144)||(9380307-9380413)
chr4 (66-147)||(9023241-9023322)
chr4 (39-145)||(9023628-9023735)
chr4 (39-145)||(32703224-32703331)
chr4 (39-144)||(23540200-23540306)
chr4 (39-144)||(39086571-39086677)
chr4 (39-148)||(39744026-39744136)
chr4 (66-144)||(43292333-43292411)
chr4 (55-147)||(16555512-16555605)
chr4 (66-145)||(169012-169092)
chr4 (26-145)||(293152-293272)
chr4 (66-148)||(292778-292860)
chr4 (56-145)||(18077167-18077257)
chr4 (39-146)||(3930427-3930535)
chr4 (39-141)||(13198606-13198711)
chr4 (66-143)||(43292038-43292115)
chr4 (9-145)||(48405961-48406097)
chr4 (66-145)||(26207360-26207438)
chr4 (62-145)||(35393749-35393830)
chr4 (82-148)||(11241653-11241718)
chr4 (39-116)||(23539867-23539945)
chr4 (83-145)||(24775776-24775838)
chr4 (66-116)||(44468899-44468949)
chr4 (66-116)||(48406361-48406411)
chr4 (90-140)||(49178816-49178866)
chr4 (90-145)||(13198906-13198961)
chr4 (39-117)||(25162261-25162340)
chr4 (38-143)||(23433433-23433538)
chr4 (90-145)||(8182172-8182228)
chr4 (90-145)||(8488187-8488242)
chr4 (62-121)||(39415247-39415306)
chr4 (82-144)||(5206222-5206283)
chr4 (90-143)||(8181992-8182046)
chr4 (94-144)||(11241389-11241439)
chr4 (90-156)||(22681563-22681628)
chr4 (91-121)||(25225399-25225429)
chr4 (90-143)||(8488482-8488534)
chr4 (67-116)||(12757794-12757843)
chr4 (62-146)||(23432474-23432559)
chr4 (66-111)||(39912463-39912508)
chr4 (83-147)||(5205985-5206049)
chr4 (61-117)||(11530170-11530225)
chr4 (92-139)||(16555695-16555743)
chr4 (103-151)||(49178526-49178574)
[»] chr1 (68 HSPs)
chr1 (29-145)||(49284408-49284525)
chr1 (9-144)||(6002237-6002374)
chr1 (9-142)||(6002810-6002946)
chr1 (9-121)||(49284972-49285086)
chr1 (39-145)||(39691948-39692055)
chr1 (39-144)||(48105064-48105170)
chr1 (39-146)||(28633718-28633826)
chr1 (39-144)||(9347126-9347232)
chr1 (82-156)||(48190759-48190833)
chr1 (39-147)||(44911022-44911131)
chr1 (66-146)||(32163019-32163099)
chr1 (39-145)||(47955305-47955413)
chr1 (39-144)||(27172116-27172221)
chr1 (39-145)||(27172490-27172596)
chr1 (39-146)||(26815067-26815175)
chr1 (39-142)||(50526420-50526524)
chr1 (82-145)||(8108985-8109048)
chr1 (39-145)||(20480167-20480273)
chr1 (66-141)||(42611188-42611263)
chr1 (39-141)||(46823846-46823949)
chr1 (39-141)||(48104681-48104784)
chr1 (83-146)||(48191348-48191411)
chr1 (66-141)||(50430057-50430132)
chr1 (66-144)||(6703870-6703948)
chr1 (39-116)||(13918474-13918552)
chr1 (39-144)||(26814694-26814800)
chr1 (39-147)||(6703457-6703566)
chr1 (39-146)||(999473-999580)
chr1 (39-146)||(9347499-9347606)
chr1 (39-142)||(17518551-17518653)
chr1 (39-146)||(28634105-28634213)
chr1 (39-144)||(50615569-50615674)
chr1 (39-144)||(50623397-50623502)
chr1 (68-145)||(4692411-4692488)
chr1 (69-150)||(20480591-20480671)
chr1 (39-151)||(49318114-49318226)
chr1 (66-146)||(44911413-44911493)
chr1 (9-75)||(48191302-48191369)
chr1 (66-145)||(46824254-46824333)
chr1 (66-145)||(50429655-50429734)
chr1 (38-147)||(19008697-19008807)
chr1 (66-144)||(21687025-21687103)
chr1 (39-144)||(49317752-49317857)
chr1 (66-143)||(13918843-13918920)
chr1 (62-147)||(17518300-17518384)
chr1 (62-146)||(31848166-31848248)
chr1 (39-141)||(22149649-22149750)
chr1 (39-145)||(33085670-33085775)
chr1 (62-146)||(47955580-47955664)
chr1 (9-75)||(48190811-48190879)
chr1 (68-144)||(49318421-49318496)
chr1 (66-141)||(999115-999189)
chr1 (90-145)||(13589659-13589713)
chr1 (66-144)||(20371328-20371406)
chr1 (62-117)||(24671283-24671338)
chr1 (66-141)||(42611590-42611665)
chr1 (66-116)||(20371066-20371116)
chr1 (38-141)||(31847898-31848002)
chr1 (68-116)||(21687445-21687493)
chr1 (39-144)||(41082909-41083015)
chr1 (74-116)||(32162757-32162799)
chr1 (66-116)||(47498327-47498377)
chr1 (68-114)||(50949191-50949237)
chr1 (90-151)||(8108714-8108775)
chr1 (67-112)||(44224096-44224141)
chr1 (91-147)||(39690791-39690847)
chr1 (90-146)||(41083211-41083266)
chr1 (66-146)||(50949541-50949621)
[»] chr3 (54 HSPs)
chr3 (9-148)||(1928351-1928491)
chr3 (39-144)||(8314013-8314119)
chr3 (17-147)||(10771501-10771629)
chr3 (39-146)||(48159895-48160003)
chr3 (62-144)||(21896483-21896564)
chr3 (66-154)||(48160309-48160397)
chr3 (39-144)||(10293608-10293715)
chr3 (39-144)||(20968967-20969073)
chr3 (39-141)||(27238848-27238951)
chr3 (39-145)||(40848520-40848626)
chr3 (39-145)||(53687887-53687994)
chr3 (39-144)||(42673244-42673349)
chr3 (39-144)||(47666283-47666389)
chr3 (69-154)||(3353118-3353202)
chr3 (39-143)||(22429159-22429264)
chr3 (39-147)||(27238462-27238571)
chr3 (66-146)||(40848937-40849017)
chr3 (43-145)||(47871073-47871176)
chr3 (66-145)||(26007181-26007259)
chr3 (26-144)||(42672978-42673096)
chr3 (66-116)||(10348775-10348825)
chr3 (66-144)||(24485436-24485513)
chr3 (88-144)||(3644781-3644837)
chr3 (82-146)||(45060863-45060927)
chr3 (9-75)||(1927812-1927878)
chr3 (69-116)||(24485049-24485096)
chr3 (66-116)||(3353527-3353577)
chr3 (66-116)||(22429572-22429622)
chr3 (66-112)||(42456171-42456217)
chr3 (39-116)||(53688251-53688329)
chr3 (66-116)||(53766191-53766241)
chr3 (39-147)||(26007567-26007676)
chr3 (68-149)||(36180968-36181049)
chr3 (83-147)||(14015957-14016020)
chr3 (9-121)||(28702300-28702410)
chr3 (62-145)||(20968717-20968800)
chr3 (68-147)||(47665908-47665987)
chr3 (82-144)||(1927772-1927834)
chr3 (90-144)||(10293909-10293963)
chr3 (62-144)||(18875163-18875245)
chr3 (82-147)||(21895654-21895720)
chr3 (39-116)||(36180582-36180660)
chr3 (67-143)||(10348480-10348556)
chr3 (68-144)||(44008379-44008454)
chr3 (91-146)||(1101182-1101237)
chr3 (91-146)||(18874880-18874935)
chr3 (90-144)||(13657445-13657499)
chr3 (82-144)||(17372298-17372360)
chr3 (91-140)||(4947263-4947312)
chr3 (95-148)||(42455786-42455839)
chr3 (91-151)||(1100908-1100968)
chr3 (91-147)||(8315083-8315138)
chr3 (90-141)||(13657621-13657673)
chr3 (93-145)||(17441066-17441118)
[»] scaffold0110 (2 HSPs)
scaffold0110 (39-150)||(45754-45866)
scaffold0110 (62-145)||(45536-45618)
[»] scaffold0460 (2 HSPs)
scaffold0460 (39-145)||(329-436)
scaffold0460 (66-116)||(739-789)
[»] scaffold0192 (1 HSPs)
scaffold0192 (39-145)||(25316-25424)
[»] scaffold0802 (2 HSPs)
scaffold0802 (39-144)||(1367-1474)
scaffold0802 (62-144)||(1118-1200)
[»] scaffold0176 (2 HSPs)
scaffold0176 (66-145)||(19620-19698)
scaffold0176 (78-146)||(20031-20099)
[»] scaffold0017 (2 HSPs)
scaffold0017 (66-144)||(185250-185328)
scaffold0017 (39-143)||(184840-184945)
[»] scaffold0319 (2 HSPs)
scaffold0319 (39-144)||(6644-6750)
scaffold0319 (90-145)||(6393-6448)
[»] scaffold0041 (2 HSPs)
scaffold0041 (39-145)||(38643-38750)
scaffold0041 (66-111)||(38284-38329)
[»] scaffold0001 (3 HSPs)
scaffold0001 (62-144)||(438930-439012)
scaffold0001 (62-146)||(439173-439255)
scaffold0001 (54-145)||(183626-183717)
[»] scaffold0029 (1 HSPs)
scaffold0029 (39-145)||(9904-10012)
[»] scaffold0009 (1 HSPs)
scaffold0009 (90-145)||(205686-205740)
[»] scaffold0069 (2 HSPs)
scaffold0069 (66-144)||(50482-50560)
scaffold0069 (66-116)||(50101-50151)
[»] scaffold0035 (1 HSPs)
scaffold0035 (92-143)||(72967-73018)
[»] scaffold0535 (1 HSPs)
scaffold0535 (94-145)||(10011-10062)
[»] scaffold0002 (1 HSPs)
scaffold0002 (39-144)||(411923-412028)
[»] scaffold1221 (1 HSPs)
scaffold1221 (88-121)||(1533-1566)
[»] scaffold0376 (1 HSPs)
scaffold0376 (88-145)||(7454-7510)


Alignment Details
Target: scaffold0328 (Bit Score: 114; Significance: 6e-58; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 9 - 144
Target Start/End: Original strand, 6712 - 6849
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  6712 acatcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 6811  T
Q  107 aattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  6812 aattggcaaaagataggggtgaaaaatgcaattaagcc 6849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 6288 - 6152
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcaca 107  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||| |||||||| |||||||||||    
T  6288 acatcatcactaaaacacatgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcatttaaaaatatggggtgtaaaatcgcaca 6189  T
Q  108 attggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||| ||||||||||  |||||||| ||||||||||||    
T  6188 attagcaaaagatagaggtgaaaagtgcaattaagcc 6152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 113; Significance: 2e-57; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 13863450 - 13863310
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    ||||||||||||||||||||||||| |||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13863450 acatcatcactaaaacacatggggggcctccaaatcagaaagagggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 13863351  T
Q  107 aattggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  13863350 aattggcaaaagataggggtgaaaaatgcaattaagcctaa 13863310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 44599626 - 44599489
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  44599626 acatcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 44599527  T
Q  107 aattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  44599526 aattggcaaaagataggggtgaaaagtgcaattaagcc 44599489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 9 - 145
Target Start/End: Original strand, 13863875 - 13864011
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcaca 107  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||    
T  13863875 acatcatcactaaaacacatcggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgc-aaatcgcaca 13863973  T
Q  108 attggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  13863974 attggcaaaagataggggtgaaaagtgcaattaagcct 13864011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 29 - 145
Target Start/End: Original strand, 44600073 - 44600190
Alignment:
Q  29 gggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtg 127  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44600073 gggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtg 44600172  T
Q  128 aaaaatgcaattaagcct 145  Q
    |||| |||||||||||||    
T  44600173 aaaagtgcaattaagcct 44600190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 8643684 - 8643823
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcaca 107  Q
    |||||||| ||||||||||| ||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  8643684 acatcatcgctaaaacacataggggccttcaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaataacatggggtgcaaaatcgcaca 8643783  T
Q  108 attggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    ||||| |||||||| || |||||| |||||||||||||||    
T  8643784 attggtaaaagatagggatgaaaagtgcaattaagcctaa 8643823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 46816229 - 46816368
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcaca 107  Q
    ||||||||| ||||| | |||||||||| |||| |||||| ||| |||| |||||| | |||||||||||||||||||| |||||||||||||||||| |    
T  46816229 acatcatcattaaaatatatgggggccttcaaaccagaaaggggaaaaatgatggggtacaaaatcgctcgtttaaaaatatggggtgcaaaatcgcata 46816328  T
Q  108 attggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    ||||| ||||||||  ||  |||| |||||||||||||||    
T  46816329 attggtaaaagatagcgggaaaaagtgcaattaagcctaa 46816368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 10533140 - 10533032
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||||||||  ||| ||| ||||| |||||    
T  10533140 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 10533041  T
Q  138 ttaagccta 146  Q
    |||||||||    
T  10533040 ttaagccta 10533032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 37888939 - 37888833
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||||||||  ||| ||| ||||| |||||    
T  37888939 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 37888840  T
Q  138 ttaagcc 144  Q
    |||||||    
T  37888839 ttaagcc 37888833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 66 - 146
Target Start/End: Original strand, 37889235 - 37889315
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagccta 146  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||  ||| ||| ||||| ||||||||||||||    
T  37889235 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 37889315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 20419272 - 20419379
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||| ||||  ||| ||| ||||| |||||    
T  20419272 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaa 20419371  T
Q  138 ttaagcct 145  Q
    ||||||||    
T  20419372 ttaagcct 20419379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 22740262 - 22740155
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||| ||||  ||| ||| ||||| |||||    
T  22740262 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaa 22740163  T
Q  138 ttaagcct 145  Q
    ||||||||    
T  22740162 ttaagcct 22740155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 37972372 - 37972451
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||  ||| ||| ||||| |||||||||||||    
T  37972372 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 37972451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 66 - 144
Target Start/End: Original strand, 9035269 - 9035347
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||  ||| ||| ||||| ||||||||||||    
T  9035269 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9035347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 54 - 147
Target Start/End: Original strand, 9412288 - 9412382
Alignment:
Q  54 aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    ||||||||||| |||||||||||||    ||||| | |||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||    
T  9412288 aaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcctaa 9412382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 66 - 144
Target Start/End: Complemental strand, 13741635 - 13741557
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||| |||  ||| ||| ||||||||||||||||||    
T  13741635 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggtaaactataggggggaaaaatgcaattaagcc 13741557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 29293294 - 29293400
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| |||||||||||||||| |||  |||| ||||||||||||||||||||||||  ||| ||| |||||||||||    
T  29293294 aaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaacaatggagtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaa 29293393  T
Q  138 ttaagcc 144  Q
    |||||||    
T  29293394 ttaagcc 29293400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 66 - 148
Target Start/End: Complemental strand, 37972038 - 37971956
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaat 148  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||  | | ||| ||||| ||||||||||||||||    
T  37972038 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactacaggggagaaaagtgcaattaagcctaat 37971956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 66 - 147
Target Start/End: Complemental strand, 20418966 - 20418885
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||  ||| ||| ||||| ||||||||| |||||    
T  20418966 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaaacctaa 20418885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 3205041 - 3205148
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  | |||||||||||||||||||||| ||||  ||| ||| ||||| |||||    
T  3205041 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactacggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaa 3205140  T
Q  138 ttaagcct 145  Q
    ||||||||    
T  3205141 ttaagcct 3205148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 3687604 - 3687710
Alignment:
Q  39 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | |||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  3687604 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaa-aaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgca 3687702  T
Q  137 attaagcc 144  Q
    ||||||||    
T  3687703 attaagcc 3687710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 17157073 - 17156966
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| |||||||||||| |||||||  |||||||||||||||||||||||| ||||  ||| ||| ||||| |||||    
T  17157073 aaatcagaaagggggaaaactatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaa 17156974  T
Q  138 ttaagcct 145  Q
    ||||||||    
T  17156973 ttaagcct 17156966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 18864073 - 18863970
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||| ||||  ||| ||| ||||| |||||    
T  18864073 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaa 18863974  T
Q  138 ttaa 141  Q
    ||||    
T  18863973 ttaa 18863970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 29293028 - 29292921
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| |||||||||||||||| |||  ||||| |||||||||||||||||||||||  ||| ||| ||||| |||||    
T  29293028 aaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaacaatgggatgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 29292929  T
Q  138 ttaagcct 145  Q
    ||||||||    
T  29292928 ttaagcct 29292921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 9034974 - 9034864
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||| |||| ||||||||||||||||||  ||| ||| ||||| ||||    
T  9034974 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggggtgcagaatcgcacaattggcaaattataggggggaaaagtgca 9034875  T
Q  137 attaagcctaa 147  Q
    |||||||||||    
T  9034874 attaagcctaa 9034864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 36527746 - 36527852
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||| |||||||||||| ||||||||||  ||| | | |||||||||||    
T  36527746 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcataattggcaaactatatgagggaaaaatgcaa 36527845  T
Q  138 ttaagcc 144  Q
    |||||||    
T  36527846 ttaagcc 36527852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 13744209 - 13744287
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| ||||  || |||| ||||| |||||||||||||    
T  13744209 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactat-agggggaaaagtgcaattaagcct 13744287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 38826861 - 38826968
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| |||||| || ||||||||||  ||| |||||||||||||||||||| ||||  ||| ||| |||||||||||    
T  38826861 aaatcagaaagggggaaaactatagggggcaaaaccgttcgtttaaaactatgaggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaa 38826960  T
Q  138 ttaagcct 145  Q
    ||||||||    
T  38826961 ttaagcct 38826968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 117
Target Start/End: Complemental strand, 46815304 - 46815195
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagatgg-gtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcaca 107  Q
    ||||||||||||||||| ||||| || | ||||||||||| |||||||| ||||| |||||| |||| | ||||||||| ||| | ||||| || |||||    
T  46815304 acatcatcactaaaacatatgggagcattcaaatcagaaagggggaaaatgatggagtgcaagatcgtttgtttaaaaatatgagatgcaagattgcaca 46815205  T
Q  108 attggcaaaa 117  Q
    |||| |||||    
T  46815204 attgacaaaa 46815195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 18864350 - 18864457
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| |||||||||||| |||||||  ||| |||||||||||||||||||||||||  || |||| ||||| | |||    
T  18864350 aaatcagaaagggggaaaactatagggggcaaaatcgctcttttaaaactatgaggtgcaaaatcgcacaattggcaaactat-agggggaaaagtacaa 18864448  T
Q  138 ttaagccta 146  Q
    |||||||||    
T  18864449 ttaagccta 18864457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 144
Target Start/End: Complemental strand, 48359395 - 48359320
Alignment:
Q  68 aaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||||||||||||  |||||||||||||||||||||||| ||||  || |||| ||||| ||||||||||||    
T  48359395 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactat-agggggaaaagtgcaattaagcc 48359320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 9412077 - 9412022
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    |||||||||||||||||||||  ||||||||||||| ||||| |||||||||||||    
T  9412077 ggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagcct 9412022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 66 - 141
Target Start/End: Original strand, 22740567 - 22740641
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaa 141  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| ||||  || |||| ||||| |||||||||    
T  22740567 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactat-agggggaaaagtgcaattaa 22740641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 3204745 - 3204695
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    ||||||| ||||||||||||  |||||||||||||||||||||||||||||    
T  3204745 gcaaaattgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 3204695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 83 - 148
Target Start/End: Complemental strand, 13772702 - 13772637
Alignment:
Q  83 aaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaat 148  Q
    |||| ||||||||||||||| ||||||| |||||||||| ||  ||||| ||||||||||||||||    
T  13772702 aaaagatggggtgcaaaatcacacaattagcaaaagatagggaggaaaagtgcaattaagcctaat 13772637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 42418976 - 42419084
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||| ||||||| |||||||||||||||  || |||| ||||| ||||    
T  42418976 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggggtgcaaaaacgcacaattggcaaactat-agggggaaaagtgca 42419074  T
Q  137 attaagccta 146  Q
    ||||| ||||    
T  42419075 attaaaccta 42419084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 13772901 - 13772955
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||||||||||||||| ||||| |||| ||| ||||| ||||||||||||    
T  13772901 ggggtgcaaaatcgcacaattagcaaatgataggggggaaaagtgcaattaagcc 13772955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 112
Target Start/End: Original strand, 48359606 - 48359680
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattgg 112  Q
    |||||||||| ||||||||  || ||| |||||||||||||||| |||  ||| |||||||||||||||||||||    
T  48359606 aaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaactatgtggtgcaaaatcgcacaattgg 48359680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 16198975 - 16199032
Alignment:
Q  88 atggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    |||||||||||||||||||||||||||||  |||| ||  |||| |||||||||||||    
T  16198975 atggggtgcaaaatcgcacaattggcaaactataatgggaaaaagtgcaattaagcct 16199032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 30857902 - 30857959
Alignment:
Q  88 atggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    |||||||||||||| ||||||||| ||||||||||| |  |||| |||||||||||||    
T  30857902 atggggtgcaaaattgcacaattgacaaaagataagagacaaaagtgcaattaagcct 30857959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 38191566 - 38191619
Alignment:
Q  91 gggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||||||||| ||||  ||||||||| |||| |||||||||||||||||    
T  38191566 gggtgcaaaatcgcataattaacaaaagataggggtaaaaaatgcaattaagcc 38191619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 23686723 - 23686774
Alignment:
Q  96 caaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    ||||||||||||||| |||||||||| |||  |||| |||||||||||||||    
T  23686723 caaaatcgcacaattagcaaaagatagggggaaaaagtgcaattaagcctaa 23686774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 82 - 125
Target Start/End: Original strand, 35080215 - 35080258
Alignment:
Q  82 aaaaacatggggtgcaaaatcgcacaattggcaaaagataaggg 125  Q
    ||||| |||||||||||||||||||||||  |||||||||||||    
T  35080215 aaaaagatggggtgcaaaatcgcacaattaacaaaagataaggg 35080258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 42418669 - 42418590
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||||||||||  || || | ||||||||||||||| |||||  ||| ||| ||||| || ||||||||||    
T  42418669 gcaaaatcgctcgtttaaaactataggatacaaaatcgcacaattagcaaactataggggggaaaagtgaaattaagcct 42418590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 5735303 - 5735253
Alignment:
Q  93 gtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagc 143  Q
    |||||||||||||||||| || ||||||| ||| ||||| |||||||||||    
T  5735303 gtgcaaaatcgcacaattagccaaagataggggagaaaagtgcaattaagc 5735253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 153
Target Start/End: Complemental strand, 6908265 - 6908204
Alignment:
Q  91 gggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaataaata 153  Q
    ||||||||||||||||||||  ||| ||||| ||| ||||| ||||||||||||||| |||||    
T  6908265 gggtgcaaaatcgcacaattaacaatagatagggg-gaaaagtgcaattaagcctaaaaaata 6908204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 5349724 - 5349784
Alignment:
Q  81 taaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    |||||| |||||||||||||||||||||||  ||||||||| |||   ||| ||||||||||||    
T  5349724 taaaaagatggggtgcaaaatcgcacaattaacaaaagatagggg---aaagtgcaattaagcc 5349784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 153
Target Start/End: Complemental strand, 18925114 - 18925053
Alignment:
Q  92 ggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaataaata 153  Q
    |||||||||| |||||||| |||||||||| ||  ||||| |||||||||||| || |||||    
T  18925114 ggtgcaaaattgcacaattagcaaaagatagggaagaaaagtgcaattaagccaaaaaaata 18925053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 34235978 - 34236030
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaag 142  Q
    ||||||||||||||||||||| ||||||||||   | ||||||| ||||||||    
T  34235978 ggggtgcaaaatcgcacaattagcaaaagatagaagggaaaaatacaattaag 34236030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 116
Target Start/End: Complemental strand, 36527451 - 36527411
Alignment:
Q  76 tcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    ||||||||||  |||||||||||||||||||||||| ||||    
T  36527451 tcgtttaaaactatggggtgcaaaatcgcacaattgacaaa 36527411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 112; Significance: 9e-57; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 33829553 - 33829692
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33829553 acatcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 33829652  T
Q  107 aattggcaaaagataagggtgaaaaatgcaattaagccta 146  Q
    ||||||||||||||| ||||||||| ||||||||||||||    
T  33829653 aattggcaaaagataggggtgaaaagtgcaattaagccta 33829692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 29 - 144
Target Start/End: Complemental strand, 33829106 - 33828990
Alignment:
Q  29 gggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtg 127  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33829106 gggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtg 33829007  T
Q  128 aaaaatgcaattaagcc 144  Q
    |||| ||||||||||||    
T  33829006 aaaagtgcaattaagcc 33828990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 33974247 - 33974353
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||||||||  ||| ||| |||||||||||    
T  33974247 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaa 33974346  T
Q  138 ttaagcc 144  Q
    |||||||    
T  33974347 ttaagcc 33974353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 10087806 - 10087912
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||||||||  | | ||| ||||| |||||    
T  10087806 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactaaaggggggaaaagtgcaa 10087905  T
Q  138 ttaagcc 144  Q
    |||||||    
T  10087906 ttaagcc 10087912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 3403936 - 3404045
Alignment:
Q  39 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | ||||||||||||||||||||| |||||||||| ||| ||||| ||||    
T  3403936 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgca 3404035  T
Q  137 attaagccta 146  Q
    ||||||||||    
T  3404036 attaagccta 3404045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 18242103 - 18242210
Alignment:
Q  39 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | |||||||||||||||||||||||||||||||| ||   |||||||||    
T  18242103 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagatagggaaaaaaaatgca 18242202  T
Q  137 attaagcc 144  Q
    ||||||||    
T  18242203 attaagcc 18242210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 83 - 154
Target Start/End: Complemental strand, 3403778 - 3403707
Alignment:
Q  83 aaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaataaatat 154  Q
    |||| ||||||||||||||||||||||| |||||||||| ||| ||||| |||||||||||| || ||||||    
T  3403778 aaaagatggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagccaaagaaatat 3403707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 7654496 - 7654603
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||| || |||||||||||  |||||||||||||||||||||||| ||||  ||| ||| ||||| |||||    
T  7654496 aaatcagaaagggggaaaactatagggggcaaagtcactcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaa 7654595  T
Q  138 ttaagcct 145  Q
    ||||||||    
T  7654596 ttaagcct 7654603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 66 - 141
Target Start/End: Original strand, 32733972 - 32734047
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaa 141  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||||||||  ||| ||  ||||| |||||||||    
T  32733972 gcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaa 32734047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 144
Target Start/End: Original strand, 22684334 - 22684411
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||| | ||||||||  ||||||||||||||| |||||||||||||  ||||||| ||||| ||||||||||||    
T  22684334 gcaaaatcgtttgtttaaaactatggggtgcaaaatcacacaattggcaaactataaggg-gaaaagtgcaattaagcc 22684411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 144
Target Start/End: Complemental strand, 22754734 - 22754657
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||| | ||||||||  ||||||||||||||| |||||||||||||  ||||||| ||||| ||||||||||||    
T  22754734 gcaaaatcgtttgtttaaaactatggggtgcaaaatcacacaattggcaaactataaggg-gaaaagtgcaattaagcc 22754657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 22755065 - 22755142
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagc 143  Q
    ||||||||||||||||||||  ||| |||||||||||||| ||||| ||||  |||| || ||||| |||||||||||    
T  22755065 gcaaaatcgctcgtttaaaactatgtggtgcaaaatcgcataattgacaaactataaaggggaaaagtgcaattaagc 22755142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 145
Target Start/End: Original strand, 29074350 - 29074426
Alignment:
Q  68 aaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    |||||||||||||| |||  |||||||||||||||||||||||||||||  ||| ||| |||| | ||||||||||||    
T  29074350 aaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaga-gcaattaagcct 29074426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 145
Target Start/End: Original strand, 29079114 - 29079190
Alignment:
Q  68 aaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    |||||||||||||| |||  |||||||||||||||||||||||||||||  ||| ||| |||| | ||||||||||||    
T  29079114 aaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaga-gcaattaagcct 29079190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 145
Target Start/End: Original strand, 29106923 - 29106999
Alignment:
Q  68 aaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    |||||||||||||| |||  |||||||||||||||||||||||||||||  ||| ||| |||| | ||||||||||||    
T  29106923 aaaatcgctcgttttaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaga-gcaattaagcct 29106999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 90 - 146
Target Start/End: Complemental strand, 10039729 - 10039674
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagccta 146  Q
    ||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||||||    
T  10039729 ggggtgcaaaatcgcacaattagcaaaagat-agggggaaaagtgcaattaagccta 10039674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 145
Target Start/End: Complemental strand, 21032069 - 21031978
Alignment:
Q  54 aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||| |||||||||||||    ||||| | ||||||||||||||||||||| ||||||| | |||| ||||| |||||||||||||    
T  21032069 aaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaag-ttagggggaaaagtgcaattaagcct 21031978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 2354786 - 2354865
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||| |||||||| |||  |||||||||||||||||||||||| ||||  |||   | |||||||||||||||||||    
T  2354786 gcaaaatggctcgttttaaacaatggggtgcaaaatcgcacaattgacaaactatagacgggaaaaatgcaattaagcct 2354865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 18241908 - 18241853
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    |||||||||||||||||||||  ||||||||| ||| ||||| |||||||||||||    
T  18241908 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 18241853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 30388311 - 30388419
Alignment:
Q  39 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | ||||||||||||||||||||| |||||||||| |||  |||| | ||    
T  30388311 aaatcagaaagggggtaaaaagatggggtgcaaaatcgctcaa--aaaaaaagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtaca 30388408  T
Q  137 attaagcctaa 147  Q
    ||||| |||||    
T  30388409 attaaacctaa 30388419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 11656782 - 11656836
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||||||||||||||| |||||||||| | | ||||| ||||||||||||    
T  11656782 ggggtgcaaaatcgcacaattagcaaaagataggagagaaaagtgcaattaagcc 11656836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 13579651 - 13579707
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    ||||||||||||||||||||| ||||| ||| |||| ||||| |||||||||||||||    
T  13579651 ggggtgcaaaatcgcacaattagcaaacgat-agggagaaaagtgcaattaagcctaa 13579707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 146
Target Start/End: Original strand, 21032285 - 21032336
Alignment:
Q  95 gcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagccta 146  Q
    ||||||||||||||||  ||||||||| ||| ||||| ||||||||||||||    
T  21032285 gcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagccta 21032336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 33655115 - 33655169
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    |||||||||||| |||||||| |||||||||||||| || || |||||||||||||    
T  33655115 ggggtgcaaaattgcacaattagcaaaagataaggg-gacaagtgcaattaagcct 33655169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 2354514 - 2354409
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| | |||||||||||||| |||  ||||| |||||||||| |||||||  |||  || |||| |||||||||||    
T  2354514 aaatcagaaagggggaaaactatagggggaaaaatcgctcgttttaaacaatgggatgcaaaatcgtacaattgaaaaactat-agggggaaaaatgcaa 2354416  T
Q  138 ttaagcc 144  Q
    |||||||    
T  2354415 ttaagcc 2354409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 13176697 - 13176647
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    |||||||||||| ||||||| |||||| | |||||||| ||||||||||||    
T  13176697 gcaaaatcgctcatttaaaatcatgggatacaaaatcgtacaattggcaaa 13176647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 31598274 - 31598327
Alignment:
Q  91 gggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    |||||||||||||||||||| ||||||||| || | ||||||| |||||||||||    
T  31598274 gggtgcaaaatcgcacaattagcaaaagat-agagggaaaaatacaattaagcct 31598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 110; Significance: 1e-55; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 9 - 144
Target Start/End: Original strand, 39723965 - 39724102
Alignment:
Q  9 acatcatcactaaaacacatgg-gggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  39723965 acatcatcactaaaacacatggagggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 39724064  T
Q  107 aattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  39724065 aattggcaaaagataggggtgaaaagtgcaattaagcc 39724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 13026772 - 13026632
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  13026772 acatcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatgaggtgcaaaatcgcac 13026673  T
Q  107 aattggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  13026672 aattggcaaaagataggggtgaaaagtgcaattaagcctaa 13026632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 145
Target Start/End: Original strand, 9823278 - 9823416
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    |||||||||||||||  |||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9823278 acatcatcactaaaattcatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 9823377  T
Q  107 aattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  9823378 aattggcaaaagataggggtgaaaagtgcaattaagcct 9823416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 22851527 - 22851390
Alignment:
Q  9 acatcatcactaaaacacatgg-gggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  22851527 acatcatcactaaaacacatggagggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgcttgtttaaaaacatggggtgcaaaatcgcac 22851428  T
Q  107 aattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||| ||||||||| ||||||||| ||||||||||||    
T  22851427 aattgacaaaagataggggtgaaaagtgcaattaagcc 22851390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 9 - 133
Target Start/End: Complemental strand, 39723539 - 39723413
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  39723539 acatcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatgggatgcaaaatcgcac 39723440  T
Q  107 aattggcaaaagataagggtgaaaaat 133  Q
    |||||||||||||||  ||||||||||    
T  39723439 aattggcaaaagatagaggtgaaaaat 39723413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 3307475 - 3307338
Alignment:
Q  9 acatcatcactaaaacacat-gggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    |||||||||||||||||||| |||||||||||||||||||| || |||||||||||| |||||||||||| ||||||||| ||||| |||||||||||||    
T  3307475 acatcatcactaaaacacatagggggcctccaaatcagaaagggagaaaaagatggggtgcaaaatcgcttgtttaaaaatatgggatgcaaaatcgcac 3307376  T
Q  107 aattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  3307375 aattgacaaaagataggggtgaaaaatgcaattaagcc 3307338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 9822885 - 9822748
Alignment:
Q  9 acatcatcactaaaacacatggg-ggcctccaaatcagaaaaggggaaaaagatg-ggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    |||| |||||||||||||||||| ||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  9822885 acatgatcactaaaacacatgggtggcctccaaatcagaaagggggaaaaagatatggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 9822786  T
Q  107 aattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    |||||  |||||||| ||||||||| ||||||||||||    
T  9822785 aattgataaaagataggggtgaaaagtgcaattaagcc 9822748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 29 - 141
Target Start/End: Original strand, 13027219 - 13027332
Alignment:
Q  29 gggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtg 127  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13027219 gggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtg 13027318  T
Q  128 aaaaatgcaattaa 141  Q
    |||| |||||||||    
T  13027319 aaaagtgcaattaa 13027332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 13937307 - 13937445
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagatg-ggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcaca 107  Q
    |||||||||||||||||||||||||||| |||| |||||| |||||||| |||| ||||||||||| ||||||||||||||||||||||||| |||||||    
T  13937307 acatcatcactaaaacacatgggggccttcaaaccagaaagggggaaaaggatgaggtgcaaaatcactcgtttaaaaacatggggtgcaaattcgcaca 13937406  T
Q  108 attggcaaaagataagggtgaaaaatgcaattaagccta 146  Q
    |||| ||||| ||| ||| ||||| ||||||||||||||    
T  13937407 attgacaaaaaataggggggaaaagtgcaattaagccta 13937445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 145 - 234
Target Start/End: Complemental strand, 2967619 - 2967530
Alignment:
Q  145 taataaatataaggattgtaaatgttgtaggagctagcactgctacgaaactatattgaagccacttcttgaaacatgcaatatgaagcc 234  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2967619 taataaatataaggattgtaaatgttgtaggagctagcactgctatgaaactatattgaagccacttcttgaaacatgcaatatgaagcc 2967530  T

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Target: chr8; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 145
Target Start/End: Complemental strand, 6092911 - 6092776
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcaca 107  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||||||||||| ||||||||||||| ||  ||||||| ||||| ||||||||||||||    
T  6092911 acatcatcactaaaacacatgggggcctttaaatctgaaaaggggaaaaagatggggtgcaaaatcgttcaattaaaaatatgggatgcaaaatcgcaca 6092812  T
Q  108 attggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    |||| |||||||||  || | |||||||||||||||||    
T  6092811 attgacaaaagata--gggggaaaatgcaattaagcct 6092776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 13936853 - 13936722
Alignment:
Q  12 tcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaatt 110  Q
    |||||||||||||| |||| | ||| ||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  13936853 tcatcactaaaacatatggag-ccttcaaatcagaaa-ggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgcacaatt 13936756  T
Q  111 ggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    || ||||||| |||| ||||| |||||||||||||    
T  13936755 ggtaaaagat-agggggaaaagtgcaattaagcct 13936722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 9 - 155
Target Start/End: Complemental strand, 15042281 - 15042134
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagatgg-gtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcaca 107  Q
    ||||||||||| ||||||| |||| |||  |||||||||| |||||||| ||||| |||||||||||||| |||||||  || |||||||||||| ||||    
T  15042281 acatcatcactgaaacacacggggaccttgaaatcagaaagggggaaaatgatggcgtgcaaaatcgctcatttaaaacaatagggtgcaaaatcacaca 15042182  T
Q  108 attggcaaaagataagggtgaaaaatgcaattaagcctaataaatata 155  Q
    |||||||||||||||||| | ||| ||||||||| ||||| |||||||    
T  15042181 attggcaaaagataaggggggaaagtgcaattaaacctaaaaaatata 15042134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 62 - 142
Target Start/End: Complemental strand, 15442845 - 15442765
Alignment:
Q  62 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaag 142  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||||||| ||| ||| ||| ||||||||||||||||    
T  15442845 gggtgcaaaatcgcacgtttaaaaacatggggtgcaaaatcacacaattggcgaaatataggggggaaaaatgcaattaag 15442765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 41662350 - 41662457
Alignment:
Q  39 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||| |||| ||||||||||| |||||||||||||  | ||||| | |||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  41662350 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaataaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgca 41662449  T
Q  137 attaagcc 144  Q
    ||||||||    
T  41662450 attaagcc 41662457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 39 - 148
Target Start/End: Complemental strand, 37396814 - 37396704
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||| ||||||  ||| ||| ||||| |||||    
T  37396814 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaatcggcaaactataggggggaaaagtgcaa 37396715  T
Q  138 ttaagcctaat 148  Q
    |||||||||||    
T  37396714 ttaagcctaat 37396704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 22851903 - 22851970
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagatg-ggtgcaaaatcgc 75  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||    
T  22851903 acatcatcactaaaacacatgggggcctccaaatcagaaagggggaaaaagacgaggtgcaaaatcgc 22851970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 24473716 - 24473823
Alignment:
Q  39 aaatcagaaaaggggaaaaagatgggtg-caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || || | |||||||||||||||||||  |||||||||||||||||||||||||||||  ||| || |||||| |||||    
T  24473716 aaatcagaaagggggaaaactataggggacaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggatgaaaagtgcaa 24473815  T
Q  138 ttaagcct 145  Q
    ||||||||    
T  24473816 ttaagcct 24473823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 39 - 148
Target Start/End: Original strand, 6199044 - 6199154
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||  ||| ||  ||||| |||||    
T  6199044 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactatagggaagaaaagtgcaa 6199143  T
Q  138 ttaagcctaat 148  Q
    |||||||||||    
T  6199144 ttaagcctaat 6199154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 20861614 - 20861693
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||| |  ||| |||  ||||||||||||||||||    
T  20861614 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcagactatagggggaaaaaatgcaattaagcct 20861693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 41662599 - 41662520
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||||||||||  ||| |||||||||||||||||||||||||  ||| ||| ||||| |||||||||||||    
T  41662599 gcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaagcct 41662520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 142
Target Start/End: Complemental strand, 765825 - 765736
Alignment:
Q  54 aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaag 142  Q
    ||||||||||| |||||||||||||    ||||| | |||||||||||||||||||||||||||||||| ||| ||||| ||||||||||    
T  765825 aaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 765736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 6198764 - 6198655
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  || |||||||||||||||||||||| | |  ||| ||| ||||| |||||    
T  6198764 aaatcagaaatggggaaaactatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggaagaccatatgggagaaaagtgcaa 6198665  T
Q  138 ttaagcctaa 147  Q
    ||||||||||    
T  6198664 ttaagcctaa 6198655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 34498503 - 34498612
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||| || ||| ||| |||| || ||||||||  ||||||||||||||||||||||| |||||  ||| ||| ||||| |||||    
T  34498503 aaatcagaaagggggaaaaatatagggggcataatctcttgtttaaaactatggggtgcaaaatcgcacaatttgcaaactataggggggaaaagtgcaa 34498602  T
Q  138 ttaagcctaa 147  Q
    ||||||||||    
T  34498603 ttaagcctaa 34498612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 145
Target Start/End: Complemental strand, 12281215 - 12281123
Alignment:
Q  54 aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||| |||||||||||||    ||||| | | |||||||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  12281215 aaaaagatggggtgcaaaatcgctcaaaaaaaaagaggaggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 12281123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 15156132 - 15156239
Alignment:
Q  39 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||| |||| ||||||||||| ||||||||||||     ||||| | |||||||||||||||||||||| ||||||||| ||| ||||| ||||    
T  15156132 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctaaaaaaaaaagagggggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgca 15156231  T
Q  137 attaagcc 144  Q
    ||||||||    
T  15156232 attaagcc 15156239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 17431393 - 17431286
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||| |||| ||||||||||||||| ||||  ||| ||| ||||| |||||    
T  17431393 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgaaaaatcgcacaattgacaaactatatgggggaaaagtgcaa 17431294  T
Q  138 ttaagcct 145  Q
    ||||||||    
T  17431293 ttaagcct 17431286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 62 - 141
Target Start/End: Complemental strand, 34498204 - 34498125
Alignment:
Q  62 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaa 141  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||| ||||  ||| |||  |||| |||||||||    
T  34498204 gggtgcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaa 34498125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 43245978 - 43245871
Alignment:
Q  39 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||| |||| ||||||||||| |||||||||||||  | ||||| | |||||||||||||||||||||  ||||||||| |||  |||| ||||    
T  43245978 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaataaaaaagagggggtgcaaaatcgcacaattatcaaaagatagggggaaaaagtgca 43245879  T
Q  137 attaagcc 144  Q
    ||||||||    
T  43245878 attaagcc 43245871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 116
Target Start/End: Complemental strand, 9623608 - 9623530
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    ||||||||||| |||||||  || ||| ||||||| ||||||||||||  |||||||||||||||||||||||||||||    
T  9623608 aaatcagaaaaagggaaaactatagggggcaaaattgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 9623530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 148
Target Start/End: Complemental strand, 15155965 - 15155879
Alignment:
Q  62 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaat 148  Q
    ||||||||||||||||    ||||| | |||||||||||||||||||||  ||||||||| ||| ||||| ||||||||||||||||    
T  15155965 gggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcctaat 15155879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 144
Target Start/End: Original strand, 37397121 - 37397199
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||| ||||||||||||||  |||||| ||||||||||||||||||||||  ||| ||| ||||| ||||||||||||    
T  37397121 gcaaagtcgctcgtttaaaactatggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37397199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 68 - 147
Target Start/End: Original strand, 15444625 - 15444704
Alignment:
Q  68 aaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    ||||||||||||||||||  ||||||||||||||||||||||||| |||  ||| |||  |||| ||||||||| |||||    
T  15444625 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggtaaattatagggggaaaaagtgcaattaaacctaa 15444704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 22851958 - 22852009
Alignment:
Q  92 ggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagc 143  Q
    |||||||||||||||||||||||||||||| || |||||||| |||||||||    
T  22851958 ggtgcaaaatcgcacaattggcaaaagatagggatgaaaaatacaattaagc 22852009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 12281426 - 12281480
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    |||||||||||||||||||||  ||||||||||||| ||||| ||||||||||||    
T  12281426 ggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagcc 12281480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 16929242 - 16929296
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||||||||||||||| |||||||||| ||| ||||| ||||||||||||    
T  16929242 ggggtgcaaaatcgcacaattagcaaaagataggggagaaaagtgcaattaagcc 16929296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 144
Target Start/End: Complemental strand, 24473421 - 24473343
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    |||||||||||| |||||||  ||||||||||||||| |||||||||||||  ||| |||  |||| ||||||||||||    
T  24473421 gcaaaatcgctcatttaaaattatggggtgcaaaatcacacaattggcaaactatagggggaaaaagtgcaattaagcc 24473343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 25439102 - 25439152
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  25439102 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaa 25439152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 37752146 - 37752084
Alignment:
Q  82 aaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||| ||||||||||||||||||||||| |||||| ||| ||| ||||| ||||||||||||    
T  37752146 aaaaagatggggtgcaaaatcgcacaattagcaaaacataggggggaaaagtgcaattaagcc 37752084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 147
Target Start/End: Complemental strand, 16928996 - 16928939
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    ||||||||||||||||||||| |||||||||| ||| | ||| |||||||||||||||    
T  16928996 ggggtgcaaaatcgcacaattagcaaaagatagggggggaaagtgcaattaagcctaa 16928939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 33727053 - 33727156
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||  |||||||||||||||||| |||||  |||| || ||||| || ||    
T  33727053 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgaagtgcaaaatcgcacaattagcaaactataaaggagaaaagtgtaa 33727152  T
Q  138 ttaa 141  Q
    ||||    
T  33727153 ttaa 33727156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 43246176 - 43246231
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||| ||||||| |||||||||| ||| ||||| |||||||||||||    
T  43246176 ggggtgcaaaatcacacaattagcaaaagataggggggaaaagtgcaattaagcct 43246231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 23123400 - 23123338
Alignment:
Q  82 aaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||| |||||||| ||||||||||||||| ||||||||| | | ||||| ||||||||||||    
T  23123400 aaaaagatggggtgtaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaagcc 23123338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 25438848 - 25438794
Alignment:
Q  88 atggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaag 142  Q
    |||||||||||||||||||||||||||||  ||| ||| ||||| ||||||||||    
T  25438848 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 25438794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 37752416 - 37752470
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    |||||||||||||||||||||  ||||||||| ||| ||||| ||||||||||||    
T  37752416 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 37752470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 144
Target Start/End: Complemental strand, 16169249 - 16169174
Alignment:
Q  68 aaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||| ||||||||||||  ||| |||||||||| ||||||||||||||  || ||| |||||| ||||||||||||    
T  16169249 aaaattgctcgtttaaaactatgaggtgcaaaattgcacaattggcaaactat-aggatgaaaagtgcaattaagcc 16169174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 147
Target Start/End: Complemental strand, 2856582 - 2856523
Alignment:
Q  88 atggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    |||||||||||||||||||||||||||||  ||| ||  ||||| | |||||||||||||    
T  2856582 atggggtgcaaaatcgcacaattggcaaactatagggaggaaaattacaattaagcctaa 2856523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 23123517 - 23123552
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataaggg 125  Q
    ||||||||||||||||||||| ||||||||||||||    
T  23123517 ggggtgcaaaatcgcacaattagcaaaagataaggg 23123552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 3463946 - 3463999
Alignment:
Q  91 gggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    |||||||| ||||||||||| |||||| ||| ||| ||||| ||||||||||||    
T  3463946 gggtgcaagatcgcacaattagcaaaatataggggggaaaagtgcaattaagcc 3463999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 130
Target Start/End: Original strand, 9930831 - 9930879
Alignment:
Q  82 aaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaa 130  Q
    ||||||| || ||||||||||||||||||  ||||||||||||| ||||    
T  9930831 aaaaacagggagtgcaaaatcgcacaattaacaaaagataagggggaaa 9930879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 15444289 - 15444213
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaag 142  Q
    ||||||||||||||||||||  ||||  || ||||| | ||||||||||||  |||  || ||||||||||||||||    
T  15444289 gcaaaatcgctcgtttaaaactatggaatgtaaaattgtacaattggcaaactatagaggggaaaaatgcaattaag 15444213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 6e-55; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 18817089 - 18816949
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    ||||||||||||||| || |||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18817089 acatcatcactaaaatacgtggggggcctccaaatcagaaagggggaaaaagatgggatgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 18816990  T
Q  107 aattggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  18816989 aattggcaaaagataggggtgaaaaatgcaattaagcctaa 18816949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 9 - 144
Target Start/End: Original strand, 18817528 - 18817665
Alignment:
Q  9 acatcatcactaaaacacatgggggc-ctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    |||||||| ||||||||||||||||  |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18817528 acatcatcgctaaaacacatggggggtctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 18817627  T
Q  107 aattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  18817628 aattggcaaaagataggggtgaaaagtgcaattaagcc 18817665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 9 - 145
Target Start/End: Complemental strand, 11350944 - 11350807
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    ||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||    
T  11350944 acatcatcactaaaacacatggggggcctccaaatcaaaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaat-gcac 11350846  T
Q  107 aattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  11350845 aattggcaaaagataggggtgaaaaatgcaattaagcct 11350807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 11351346 - 11351483
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcaca 107  Q
    ||||||| |||||||||||||||||||||||||||| ||| |||||||| |||||| || ||||||||||||||||||| ||||||||||||||||||||    
T  11351346 acatcattactaaaacacatgggggcctccaaatcataaagggggaaaa-gatggggtgtaaaatcgctcgtttaaaaatatggggtgcaaaatcgcaca 11351444  T
Q  108 attggcaaaagataagggtgaaaaatgcaattaagccta 146  Q
    |||||||||||||| | ||||||| ||||||||| ||||    
T  11351445 attggcaaaagataggagtgaaaagtgcaattaaaccta 11351483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 12498673 - 12498564
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||||||||  ||| ||| ||||| |||||    
T  12498673 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 12498574  T
Q  138 ttaagcctaa 147  Q
    ||||||||||    
T  12498573 ttaagcctaa 12498564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 39 - 148
Target Start/End: Original strand, 12498876 - 12498986
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||| ||||||||  |||||||||||||||||||||||||||||  ||| ||| ||||| |||||    
T  12498876 aaatcagaaagggggaaaactatagggggcaaaatcgcttgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 12498975  T
Q  138 ttaagcctaat 148  Q
    |||||||||||    
T  12498976 ttaagcctaat 12498986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 26571140 - 26571221
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||  ||| ||| ||||| |||||||||||||||    
T  26571140 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcctaa 26571221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 18433122 - 18433015
Alignment:
Q  39 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| ||||||||||||||||||||||| |||||||||| ||| ||||| ||||    
T  18433122 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgca 18433023  T
Q  137 attaagcc 144  Q
    ||||||||    
T  18433022 attaagcc 18433015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 39 - 143
Target Start/End: Original strand, 22729388 - 22729492
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||||||||  || |||| ||||| |||||    
T  22729388 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaattat-agggggaaaagtgcaa 22729486  T
Q  138 ttaagc 143  Q
    ||||||    
T  22729487 ttaagc 22729492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 25115864 - 25115755
Alignment:
Q  39 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | ||||||||||||| |||||||||||||||||| ||| ||||| ||||    
T  25115864 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaaaagggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgca 25115765  T
Q  137 attaagccta 146  Q
    ||||||||||    
T  25115764 attaagccta 25115755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 25174956 - 25174847
Alignment:
Q  39 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | ||||||||||||| |||||||||||||||||| ||| ||||| ||||    
T  25174956 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaaaagggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgca 25174857  T
Q  137 attaagccta 146  Q
    ||||||||||    
T  25174856 attaagccta 25174847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 26020557 - 26020449
Alignment:
Q  39 aaatcagaaaagggg-aaaaagatg-ggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||| |||| ||||||||| |||||||||||||||    ||||| ||||||||||||||||||||||| |||||||||| ||  ||||| ||||    
T  26020557 aaatcagaaagggggcaaaaagatgcggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaagatagggaggaaaagtgca 26020458  T
Q  137 attaagcct 145  Q
    |||||||||    
T  26020457 attaagcct 26020449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 3888610 - 3888713
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||| ||||||||||||  ||||| | ||||| |||||    
T  3888610 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaattataagagggaaaagtgcaa 3888709  T
Q  138 ttaa 141  Q
    ||||    
T  3888710 ttaa 3888713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 66 - 141
Target Start/End: Complemental strand, 21207304 - 21207229
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaa 141  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||  ||| ||| ||||| |||||||||    
T  21207304 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 21207229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 149
Target Start/End: Complemental strand, 26570835 - 26570724
Alignment:
Q  39 aaatcagaaaaggggaaaaagatgggtg-caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || || | |||||||||||||||||||  |||||||||||||||||||||||| ||||  ||| ||| ||||| || ||    
T  26570835 aaatcagaaagggggaaaactataggggacaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgtaa 26570736  T
Q  138 ttaagcctaata 149  Q
    ||||||||||||    
T  26570735 ttaagcctaata 26570724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 67 - 146
Target Start/End: Complemental strand, 31569983 - 31569905
Alignment:
Q  67 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagccta 146  Q
    ||||||| |||||||||||||||| |||||||||||||||||||| |||||||| |||| ||||| ||||||||| ||||    
T  31569983 caaaatcactcgtttaaaaacatgaggtgcaaaatcgcacaattgacaaaagat-agggggaaaagtgcaattaaaccta 31569905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 117
Target Start/End: Complemental strand, 42919410 - 42919331
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaa 117  Q
    |||||||||| ||| |||| ||| ||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||    
T  42919410 aaatcagaaaggggaaaaatgatagggtgcaaaatcgctcgtttaaaaacatgtggtgaaaaatcgcacaattggaaaaa 42919331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 66 - 141
Target Start/End: Complemental strand, 43463833 - 43463759
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaa 141  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||  ||||||| ||||| |||||||||    
T  43463833 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataaggg-gaaaagtgcaattaa 43463759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 3888345 - 3888239
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||| ||||||||||||  ||| ||| ||||  |||||    
T  3888345 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaactataggggggaaatgtgcaa 3888246  T
Q  138 ttaagcc 144  Q
    |||||||    
T  3888245 ttaagcc 3888239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 116
Target Start/End: Complemental strand, 19514632 - 19514554
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  19514632 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 19514554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 82 - 147
Target Start/End: Original strand, 22429188 - 22429252
Alignment:
Q  82 aaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    ||||| ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||    
T  22429188 aaaaagatggggtgcaaaatcgcacaattagcaaaagat-agggggaaaaatgcaattaagcctaa 22429252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 43464140 - 43464248
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||| |||||||||||||||||||| ||||  || |||| ||||| |||||    
T  43464140 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattgacaaactat-agggggaaaagtgcaa 43464238  T
Q  138 ttaagcctaa 147  Q
    ||||||||||    
T  43464239 ttaagcctaa 43464248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 47 - 141
Target Start/End: Complemental strand, 2817247 - 2817152
Alignment:
Q  47 aaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaa 141  Q
    |||||||||||| || ||| ||||||||||||||||||||  ||||| |||||||||||||||||||||||  ||| ||  ||||| |||||||||    
T  2817247 aaaggggaaaaatatagggggcaaaatcgctcgtttaaaattatgggatgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaa 2817152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 19514911 - 19515018
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| |||||||  |||||||||||  |||||||||||||||||||||||| ||||  ||| ||| ||||| |||||    
T  19514911 aaatcagaaagggggaaaactatagggggcaaaataactcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaa 19515010  T
Q  138 ttaagcct 145  Q
    ||||||||    
T  19515011 ttaagcct 19515018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 25940599 - 25940520
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||||||||||  || ||||||||||||||||||||| ||||  ||| |||  ||||||||||||||||||    
T  25940599 gcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattgacaaactataggggaaaaaaatgcaattaagcct 25940520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 37610279 - 37610201
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||||||||||  ||||||||||||||| |||||||||||||  || |||| ||||| |||||||||||||    
T  37610279 gcaaaatcgctcgtttaaaactatggggtgcaaaatcacacaattggcaaactat-agggggaaaagtgcaattaagcct 37610201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 37780397 - 37780319
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||||||||||  ||||||||||||||| |||||||||||||  || |||| ||||| |||||||||||||    
T  37780397 gcaaaatcgctcgtttaaaactatggggtgcaaaatcacacaattggcaaactat-agggggaaaagtgcaattaagcct 37780319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 91 - 144
Target Start/End: Complemental strand, 23011131 - 23011079
Alignment:
Q  91 gggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  23011131 gggtgcaaaatcgcacaattagcaaaagataaggg-gaaaaatgcaattaagcc 23011079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 62 - 147
Target Start/End: Original strand, 25175123 - 25175208
Alignment:
Q  62 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    ||||||||||||||||    ||||| | |||||||||||||||||||||  ||||||||| ||| ||||| |||||||||||||||    
T  25175123 gggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcctaa 25175208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 34147245 - 34147140
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  | ||||||||||||||||||||||  |||  ||||||  ||||| |||||    
T  34147245 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactacggggtgcaaaatcgcacaattgataaactataagg--gaaaagtgcaa 34147148  T
Q  138 ttaagcct 145  Q
    ||||||||    
T  34147147 ttaagcct 34147140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 34147458 - 34147565
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  | | |||||||||||||||||||| ||||  ||| |||  |||| |||||    
T  34147458 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactacgaggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaa 34147557  T
Q  138 ttaagcct 145  Q
    ||||||||    
T  34147558 ttaagcct 34147565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 11316950 - 11317000
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    |||||||||||| |||||||  |||||||||||||||||||||||||||||    
T  11316950 gcaaaatcgctcatttaaaacaatggggtgcaaaatcgcacaattggcaaa 11317000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 144
Target Start/End: Original strand, 37780718 - 37780796
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||||||||||||||  ||| ||||||||||||||||||| |||||  ||| ||| ||||| | ||||||||||    
T  37780718 gcaaaatcgctcgtttaaaacaatgaggtgcaaaatcgcacaattagcaaactataggggggaaaagtacaattaagcc 37780796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 22428995 - 22428931
Alignment:
Q  82 aaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    ||||| ||||||||||||||||||||||| ||||||||| |||| | ||| |||||||||||||||    
T  22428995 aaaaagatggggtgcaaaatcgcacaattagcaaaagat-aggggggaaagtgcaattaagcctaa 22428931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 22729112 - 22729008
Alignment:
Q  39 aaatcagaaaaggggaaaaagatgggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaat 138  Q
    |||||||||| ||||||||  || || ||||||||||||||||||||  |||  ||||||||||||||||||  ||||  || |||| ||||| ||||||    
T  22729112 aaatcagaaagggggaaaactataggggcaaaatcgctcgtttaaaactatgaagtgcaaaatcgcacaatttacaaactat-agggggaaaagtgcaat 22729014  T
Q  139 taagcc 144  Q
    ||||||    
T  22729013 taagcc 22729008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 90 - 147
Target Start/End: Original strand, 25116061 - 25116118
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    |||||||||||||||||||||  ||||||||| ||| ||||| |||||||||||||||    
T  25116061 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcctaa 25116118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 10098919 - 10098967
Alignment:
Q  68 aaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    ||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  10098919 aaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaa 10098967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 156
Target Start/End: Original strand, 5187805 - 5187896
Alignment:
Q  65 tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaataaatataa 156  Q
    |||||||||||||    ||||| | |||||||||||| ||||||||  |||||||||||||  |||| ||||||||||||||| ||| ||||    
T  5187805 tgcaaaatcgctcaaaaaaaaatagggggtgcaaaattgcacaattaacaaaagataaggggcaaaagtgcaattaagcctaaaaaaaataa 5187896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 18433316 - 18433371
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    |||||||||||||||||||||  ||||||||| ||| ||||| |||||||||||||    
T  18433316 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 18433371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 37610594 - 37610644
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    ||||||||||||||||||||  ||| ||||||||||||||||||| |||||    
T  37610594 gcaaaatcgctcgtttaaaacaatgaggtgcaaaatcgcacaattagcaaa 37610644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 16466746 - 16466799
Alignment:
Q  94 tgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    ||||||||||||||||| |||||| ||| ||| ||||| |||||||||||||||    
T  16466746 tgcaaaatcgcacaattagcaaaatataggggggaaaagtgcaattaagcctaa 16466799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 34576972 - 34576880
Alignment:
Q  39 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaa 130  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| |||||||| |||||||||||||| |||||||||| ||| ||||    
T  34576972 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaa-aaaaagatggggtgtaaaatcgcacaattagcaaaagataggggggaaa 34576880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 146
Target Start/End: Original strand, 33324838 - 33324894
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagccta 146  Q
    ||||||||||||| |||||||| ||||||||| |||  |||| ||||||||||||||    
T  33324838 ggggtgcaaaatcacacaattgacaaaagataggggaaaaaagtgcaattaagccta 33324894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 10098597 - 10098547
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    ||||||||||||||||||||  || || |||||||||||||||||| ||||    
T  10098597 gcaaaatcgctcgtttaaaactataggatgcaaaatcgcacaattgacaaa 10098547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 138
Target Start/End: Complemental strand, 16726130 - 16726084
Alignment:
Q  92 ggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaat 138  Q
    |||||||||||||||||||||||||||||| |||  |||| ||||||    
T  16726130 ggtgcaaaatcgcacaattggcaaaagatagggggcaaaagtgcaat 16726084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 34577156 - 34577217
Alignment:
Q  82 aaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||| ||||||||||||||| ||||||| ||||||||| ||||  |||| ||||||||||||    
T  34577156 aaaaagatggggtgcaaaatcacacaattagcaaaagat-aggggaaaaagtgcaattaagcc 34577217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 41072190 - 41072240
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    ||||||||||||||||||||  || ||||||||||||| ||||||| ||||    
T  41072190 gcaaaatcgctcgtttaaaactatagggtgcaaaatcgtacaattgacaaa 41072240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 149
Target Start/End: Complemental strand, 41382945 - 41382888
Alignment:
Q  91 gggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaata 149  Q
    ||||||||||||||||||||  |||||||| |||| | ||||||||||||| |||||||    
T  41382945 gggtgcaaaatcgcacaattaacaaaagat-aggggggaaaatgcaattaaacctaata 41382888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 25940990 - 25941067
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagc 143  Q
    ||||||||||||||||||||  ||||| |||||||||||| ||||  ||||  ||| | | ||||| |||||||||||    
T  25940990 gcaaaatcgctcgtttaaaactatgggatgcaaaatcgcataattaacaaactataggagggaaaagtgcaattaagc 25941067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 2817551 - 2817626
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaag 142  Q
    ||||||||||||||||||||  || || || |||||||||||||| |||||  || |||| ||||| ||||||||||    
T  2817551 gcaaaatcgctcgtttaaaactattggatgtaaaatcgcacaattcgcaaactat-agggggaaaagtgcaattaag 2817626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 141
Target Start/End: Complemental strand, 9665617 - 9665560
Alignment:
Q  82 aaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaa 141  Q
    ||||| |||||||||||||| |||||||| ||||||||||  || ||||| |||||||||    
T  9665617 aaaaagatggggtgcaaaattgcacaattagcaaaagata--ggggaaaagtgcaattaa 9665560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 2e-54; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 2639399 - 2639538
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    |||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2639399 acatcatcgctaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 2639498  T
Q  107 aattggcaaaagataagggtgaaaaatgcaattaagccta 146  Q
    ||||||||||||||| ||||||||| ||||||||||||||    
T  2639499 aattggcaaaagataggggtgaaaagtgcaattaagccta 2639538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 9 - 141
Target Start/End: Complemental strand, 7591337 - 7591204
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcaca 107  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  7591337 acatcatcgctaaaacacatgggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcaca 7591238  T
Q  108 attggcaaaagataagggtgaaaaatgcaattaa 141  Q
    |||||||||||||| ||||||||| | |||||||    
T  7591237 attggcaaaagataggggtgaaaagtacaattaa 7591204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 9 - 144
Target Start/End: Original strand, 26842155 - 26842292
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26842155 acatcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 26842254  T
Q  107 aattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||||||||| ||||||||| |||| |||||||    
T  26842255 aattggcaaaagataggggtgaaaagtgcacttaagcc 26842292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 26841724 - 26841584
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    |||||||||||||||  |||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26841724 acatcatcactaaaattcatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 26841625  T
Q  107 aattggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  26841624 aattggcaaaagataggggtgaaaagtgcaattaagcctaa 26841584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 9 - 145
Target Start/End: Complemental strand, 2638958 - 2638819
Alignment:
Q  9 acatcatcactaaaacacatggggg--cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgca 105  Q
    ||||||||||||||| || ||||||  ||||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  2638958 acatcatcactaaaatacgtgggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaatatggggtgcaaaatcgca 2638859  T
Q  106 caattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  2638858 caattggcaaaagataggggtgaaaaatgcaattaagcct 2638819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 29 - 143
Target Start/End: Complemental strand, 18296192 - 18296077
Alignment:
Q  29 gggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtg 127  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18296192 gggggcctccaaatcagaaaaggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtg 18296093  T
Q  128 aaaaatgcaattaagc 143  Q
    |||| | |||||||||    
T  18296092 aaaagtacaattaagc 18296077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 144
Target Start/End: Original strand, 7591767 - 7591904
Alignment:
Q  9 acatcatcactaaaacacat-gggggcctccaaatcagaaaaggggaaaaagatg-ggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    ||||||||||||||| || | |||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7591767 acatcatcactaaaatacgtagggggcctccaaatcagaaagggggaaaaaaatgaggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 7591866  T
Q  107 aattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||| ||||||||| | |||||| |||||||||||||    
T  7591867 aattgacaaaagataggagtgaaagatgcaattaagcc 7591904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 47 - 145
Target Start/End: Complemental strand, 37720301 - 37720203
Alignment:
Q  47 aaaggggaaaaagatgggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    |||||||||||  || || ||||||||||||||||||||  |||||||||||||||||||||||||||||  ||| ||| ||||| |||||||||||||    
T  37720301 aaaggggaaaactataggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcct 37720203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 30191030 - 30190921
Alignment:
Q  39 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | |||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  30191030 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgca 30190931  T
Q  137 attaagccta 146  Q
    ||||||||||    
T  30190930 attaagccta 30190921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 8851254 - 8851151
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||||||||  ||| ||| ||||| |||||    
T  8851254 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 8851155  T
Q  138 ttaa 141  Q
    ||||    
T  8851154 ttaa 8851151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 18296685 - 18296748
Alignment:
Q  82 aaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  18296685 aaaaagatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcct 18296748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 112
Target Start/End: Original strand, 38490758 - 38490863
Alignment:
Q  9 acatcatcactaaaacacatg-ggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    |||||||||||||||   ||| |||||||  |||||| ||| ||||||||||||||| ||||||||||||||||||||| |||| | |||||||||||||    
T  38490758 acatcatcactaaaagttatgaggggccttgaaatcataaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaccatgagatgcaaaatcgcac 38490857  T
Q  107 aattgg 112  Q
    ||||||    
T  38490858 aattgg 38490863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 66 - 147
Target Start/End: Original strand, 41790888 - 41790969
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    |||||||||||||||| |||  |||||| ||||||||||||||||||||||| ||| ||| ||||| |||||||||||||||    
T  41790888 gcaaaatcgctcgttttaaacaatggggggcaaaatcgcacaattggcaaaatataggggggaaaagtgcaattaagcctaa 41790969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 7664354 - 7664246
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||||||||||||||||||||||  |||  ||| ||| ||||| |||||    
T  7664354 aaatcagaaagggggaaaattatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaa 7664255  T
Q  138 ttaagccta 146  Q
    |||||||||    
T  7664254 ttaagccta 7664246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 18296639 - 18296707
Alignment:
Q  9 acatcatcactaaaacacatgggg-gcctccaaatcagaaaaggggaaaaagat-gggtgcaaaatcgc 75  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||    
T  18296639 acatcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgc 18296707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 145
Target Start/End: Complemental strand, 24832422 - 24832330
Alignment:
Q  54 aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||| |||||||||||||    ||||| ||||||||||||||||||||||| |||||||||| ||| ||||| |||||||||||||    
T  24832422 aaaaagatggggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcct 24832330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 153
Target Start/End: Original strand, 7664621 - 7664736
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||| ||||  ||| ||  ||||| |||||    
T  7664621 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaa 7664720  T
Q  138 ttaagcctaataaata 153  Q
    ||||||| || |||||    
T  7664721 ttaagccaaaaaaata 7664736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 8851558 - 8851637
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| ||||  ||| ||| ||||| |||||||||||||    
T  8851558 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcct 8851637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 26692768 - 26692871
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||||||||  |||  || ||||| |||||    
T  26692768 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaa 26692867  T
Q  138 ttaa 141  Q
    ||||    
T  26692868 ttaa 26692871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 144
Target Start/End: Complemental strand, 16910905 - 16910827
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||  | | ||| ||||| ||||||||||||    
T  16910905 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactacatgggggaaaagtgcaattaagcc 16910827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 38 - 153
Target Start/End: Complemental strand, 5378768 - 5378652
Alignment:
Q  38 caaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||||  ||| |||| || ||| |||||||||| ||||| |||  | |||||||||||||||||||||||||||  ||| ||| ||||| ||||    
T  5378768 caaatcagaaagagggtaaaatatagggggcaaaatcgcacgttttaaactacggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgca 5378669  T
Q  137 attaagcctaataaata 153  Q
    ||||||||||| |||||    
T  5378668 attaagcctaaaaaata 5378652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 54 - 145
Target Start/End: Original strand, 20347427 - 20347519
Alignment:
Q  54 aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||| ||||||||| |||    ||||| | |||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  20347427 aaaaagatggggtgcaaaatccctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 20347519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 17851350 - 17851457
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||| ||||||||||||||||||||  ||||  |  |||| |||||    
T  17851350 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgtaaaatcgcacaattggcaaactataaaagaaaaaagtgcaa 17851449  T
Q  138 ttaagcct 145  Q
    ||||||||    
T  17851450 ttaagcct 17851457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 147
Target Start/End: Complemental strand, 7979643 - 7979564
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| ||||  ||||||  ||||| |||||| ||||||||    
T  7979643 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgtcaaactataagg--gaaaagtgcaataaagcctaa 7979564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 144
Target Start/End: Original strand, 11883890 - 11883980
Alignment:
Q  55 aaaagatgg-gtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||| ||||||||||||||    ||||| | ||||||||||||||||||||| |||||||||| ||| ||||| ||||||||||||    
T  11883890 aaaagatggagtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 11883980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 16911217 - 16911295
Alignment:
Q  39 aaatcagaaaaggggaaaaagatgggtg-caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    |||||||||| ||||||||  || || | |||||||||||||||||||  |||||||||||||||||||||||||||||    
T  16911217 aaatcagaaagggggaaaactataggggacaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 16911295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 144
Target Start/End: Complemental strand, 17851055 - 17850978
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||||||||| ||||  |||||||||||||||||||||||||||||  ||| ||| ||||| ||||||||||||    
T  17851055 gcaaaatcgctcgtt-aaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 17850978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 38 - 146
Target Start/End: Original strand, 5379906 - 5380015
Alignment:
Q  38 caaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    ||||||||||| |||| |||| || ||| |||||||||| ||||| |||  | ||||||||||||||||||||||| |||  ||| ||| ||||| ||||    
T  5379906 caaatcagaaagggggtaaaatatagggggcaaaatcgcacgttttaaactacggggtgcaaaatcgcacaattggtaaactataggggggaaaagtgca 5380005  T
Q  137 attaagccta 146  Q
    ||||||||||    
T  5380006 attaagccta 5380015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 142
Target Start/End: Original strand, 6325298 - 6325399
Alignment:
Q  42 tcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaatta 140  Q
    ||||||| ||||||||  || ||| |||||||||||||||||| |  ||| |||||||||||||||||||||||||  ||| ||| ||||| ||||||||    
T  6325298 tcagaaatggggaaaactatagggggcaaaatcgctcgtttaatactatgaggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaatta 6325397  T
Q  141 ag 142  Q
    ||    
T  6325398 ag 6325399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 6171404 - 6171511
Alignment:
Q  39 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||| |||| ||||||||||| |||||||| ||||    ||||| | ||||||||||||| |||||||||||||||||| ||| ||||| ||||    
T  6171404 aaatcagaaagggggcaaaaagatggggtgcaaaattgctcaaaaaaaaaga-ggggtgcaaaatcccacaattggcaaaagataggggggaaaagtgca 6171502  T
Q  137 attaagcct 145  Q
    |||||||||    
T  6171503 attaagcct 6171511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 145
Target Start/End: Complemental strand, 11883714 - 11883622
Alignment:
Q  54 aaaaagatg-ggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||| |||||||||| ||||    ||||| | ||||||||||||||||||||| |||||||||| ||| ||||| |||||||||||||    
T  11883714 aaaaagatgaggtgcaaaattgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcct 11883622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 40469676 - 40469780
Alignment:
Q  39 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | ||||||||||||||||||||| |||||||||| |||  |||| ||||    
T  40469676 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgca 40469775  T
Q  137 attaa 141  Q
    |||||    
T  40469776 attaa 40469780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 66 - 141
Target Start/End: Complemental strand, 5793525 - 5793450
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaa 141  Q
    ||||||||||||||||||||  || || |||||||||||||||||||||||  | ||||| ||||| |||||||||    
T  5793525 gcaaaatcgctcgtttaaaactataggatgcaaaatcgcacaattggcaaactacaagggggaaaagtgcaattaa 5793450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 66 - 141
Target Start/End: Complemental strand, 41790568 - 41790494
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaa 141  Q
    |||||||||||||||| |||  |||||||||||||||||||||||| ||||  || |||| |||||||||||||||    
T  41790568 gcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattgacaaactat-agggggaaaaatgcaattaa 41790494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 137
Target Start/End: Complemental strand, 6324994 - 6324924
Alignment:
Q  67 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||||||||||||  ||||| |||||||||||||||||||||||  ||| ||| ||||| |||||    
T  6324994 caaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 6324924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 18750102 - 18750152
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  18750102 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaa 18750152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 19141797 - 19141875
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    |||||||||| ||||||||  || ||| |||||||||||||||| |||  ||||| |||||||||||||||||||||||    
T  19141797 aaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaactatgggatgcaaaatcgcacaattggcaaa 19141875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 26692474 - 26692424
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  26692474 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaa 26692424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 26737781 - 26737835
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    |||||||||||||||||| || |||||||||| ||||||||| ||||||||||||    
T  26737781 ggggtgcaaaatcgcacagttagcaaaagataggggtgaaaagtgcaattaagcc 26737835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 40469509 - 40469427
Alignment:
Q  62 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||||||||||    ||||| | ||||||||||||||||||||| |||||||||| | | ||||||| ||||||||||    
T  40469509 gggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggagggaaaaatacaattaagcc 40469427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 32673090 - 32673174
Alignment:
Q  39 aaatcagaaa-aggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagata 121  Q
    |||||||||| ||||  |||||||||| |||||||||||||    ||||| | ||||||||||||||||||||||||||||||||    
T  32673090 aaatcagaaagagggcgaaaagatggggtgcaaaatcgctcaaaaaaaaatagggggtgcaaaatcgcacaattggcaaaagata 32673174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 116
Target Start/End: Original strand, 7979982 - 7980029
Alignment:
Q  69 aaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    |||||||||||||||||  ||||||||||||||||||||||| |||||    
T  7979982 aaatcgctcgtttaaaactatggggtgcaaaatcgcacaattagcaaa 7980029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 153
Target Start/End: Original strand, 30191197 - 30191288
Alignment:
Q  62 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaataaata 153  Q
    ||||||||||||||||    ||||| | |||||||||||||||||||||   |||||||| ||| ||||| |||||||||||| || |||||    
T  30191197 gggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaattaagccaaaaaaata 30191288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 92 - 148
Target Start/End: Original strand, 17346037 - 17346092
Alignment:
Q  92 ggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaat 148  Q
    ||||||||||||||||||| ||||||||||| ||  |||| ||||||||||||||||    
T  17346037 ggtgcaaaatcgcacaattagcaaaagataaagg-aaaaagtgcaattaagcctaat 17346092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 26737534 - 26737481
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||||||||||| ||||||||||  || ||||| |||||||||||||    
T  26737534 ggggtgcaaaatcgcacaattagcaaaagata--ggagaaaagtgcaattaagcct 26737481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 142
Target Start/End: Complemental strand, 19141515 - 19141446
Alignment:
Q  72 tcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaag 142  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||  ||| |||  |||| ||||||||||    
T  19141515 tcgctcgtttaaaactatggggtgcaaaat-gcacaattggcaaactatagggggaaaaagtgcaattaag 19141446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 32672924 - 32672842
Alignment:
Q  62 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||||||||||    ||||| |  ||||||||||||||||||||  ||||||||||||   |||| ||||||||||||    
T  32672924 gggtgcaaaatcgctcaaaaaaaaagagagggtgcaaaatcgcacaattaacaaaagataaggaacaaaagtgcaattaagcc 32672842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 145
Target Start/End: Original strand, 6495723 - 6495776
Alignment:
Q  92 ggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    |||||||||||||||||||  ||||||||| ||  ||||| |||||||||||||    
T  6495723 ggtgcaaaatcgcacaattcacaaaagatagggaggaaaagtgcaattaagcct 6495776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 144
Target Start/End: Complemental strand, 6171207 - 6171156
Alignment:
Q  92 ggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    |||||||||||||||||||  |||||||| |||| ||||| ||||||||||||    
T  6171207 ggtgcaaaatcgcacaattaacaaaagat-agggggaaaagtgcaattaagcc 6171156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 146
Target Start/End: Complemental strand, 20347217 - 20347161
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagccta 146  Q
    |||||||||||||||||||||  |||||||||  || ||||| || |||||||||||    
T  20347217 ggggtgcaaaatcgcacaattaacaaaagatagaggggaaaagtgtaattaagccta 20347161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 40469607 - 40469655
Alignment:
Q  92 ggtgcaaaatcgcacaattggcaaaa-gataagggtgaaaaatgcaatt 139  Q
    ||||||||||||||||||| |||||| |||||||| ||||| |||||||    
T  40469607 ggtgcaaaatcgcacaattagcaaaacgataagggggaaaagtgcaatt 40469655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 107; Significance: 9e-54; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 9 - 145
Target Start/End: Complemental strand, 36095953 - 36095816
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    ||||||||||||||| ||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  36095953 acatcatcactaaaatacatggggggcctccaaatcagaaa-ggggaaaaagatagggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 36095855  T
Q  107 aattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  36095854 aattggcaaaagataggggtgaaaaatgcaattaagcct 36095816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 9 - 145
Target Start/End: Original strand, 43051169 - 43051307
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    ||||||||||||||||||||||||| |||||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  43051169 acatcatcactaaaacacatggggggcctccaaatcagaaagagggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcacac 43051268  T
Q  107 aattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  43051269 aattggcaaaagataggggtgaaaaatgcaattaagcct 43051307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 9 - 144
Target Start/End: Original strand, 50679341 - 50679478
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||    
T  50679341 acatcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgtac 50679440  T
Q  107 aattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  50679441 aattggcaaaagataggggtgaaaagtgcaattaagcc 50679478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 141
Target Start/End: Original strand, 36096392 - 36096526
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  36096392 acatcatcactaaaacacatggggggcctccaaatcagaaaggggaaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 36096491  T
Q  107 aattggcaaaagataagggtgaaaaatgcaattaa 141  Q
    ||||||||||||||| ||||||||| |||||||||    
T  36096492 aattggcaaaagataggggtgaaaagtgcaattaa 36096526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 29 - 146
Target Start/End: Complemental strand, 50678895 - 50678777
Alignment:
Q  29 gggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtg 127  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  50678895 gggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtg 50678796  T
Q  128 aaaaatgcaattaagccta 146  Q
    |||| ||||||||||||||    
T  50678795 aaaagtgcaattaagccta 50678777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 9 - 150
Target Start/End: Complemental strand, 43050744 - 43050601
Alignment:
Q  9 acatcatcactaaaacacatgg-gggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  43050744 acatcatcactaaaacacatggagggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcactcgtttaaaaacatggggtgcaaaatcgcac 43050645  T
Q  107 aattggcaaaagataagggtgaaaaatgcaattaagcctaataa 150  Q
    |||||| |||||||| || |||||| ||||||||| ||| ||||    
T  43050644 aattggtaaaagatagggatgaaaagtgcaattaaaccttataa 43050601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 45830115 - 45830253
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcaca 107  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||    
T  45830115 acatcatcactaaaacatatggggggctccaaatcagaaa-ggggaaaaagatggggtgcaaaatcgctcttttaaaaacatggggtgtaaaatcgcaca 45830213  T
Q  108 attggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    |||| ||||||||| ||||||||| ||| |||||||||||    
T  45830214 attgacaaaagataggggtgaaaagtgcgattaagcctaa 45830253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 56505830 - 56505691
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    ||||||||||||||||||||||||| ||| |||| |||||| ||||||||||||||| |||||||| ||||  ||||||| |||||||||||||||||||    
T  56505830 acatcatcactaaaacacatggggggccttcaaaccagaaagggggaaaaagatggggtgcaaaatagctcaattaaaaatatggggtgcaaaatcgcac 56505731  T
Q  107 aattggcaaaagataagggtgaaaaatgcaattaagccta 146  Q
    ||||||||||||||| ||| ||||| ||||||||||||||    
T  56505730 aattggcaaaagataggggggaaaagtgcaattaagccta 56505691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 56506491 - 56506630
Alignment:
Q  9 acatcatcactaaaacacatg-ggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    ||||||||||||||||||| | ||||||| ||||||||||| |||||||| |||||| |||||||||||||  |||||||||||| || |||||| ||||    
T  56506491 acatcatcactaaaacacacgaggggccttcaaatcagaaagggggaaaatgatggggtgcaaaatcgctcaattaaaaacatggagtacaaaattgcac 56506590  T
Q  107 aattggcaaaagataagggtgaaaaatgcaattaagccta 146  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  56506591 aattggcaaaagataagggtgaaaagtgcaattaagccta 56506630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 47219122 - 47219258
Alignment:
Q  9 acatcatcactaaaacacatgg-gggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    |||||||||||||||||||||| ||||||||||||||||    |||||||||||||| || ||||||||| ||||||||||||  |||||||||||||||    
T  47219122 acatcatcactaaaacacatggagggcctccaaatcaga----gggaaaaagatggggtgtaaaatcgctggtttaaaaacataaggtgcaaaatcgcac 47219217  T
Q  107 aattggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    |||| ||||||||||  |||||||||||||||||| |||||    
T  47219218 aattagcaaaagatagaggtgaaaaatgcaattaaacctaa 47219258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 145
Target Start/End: Complemental strand, 45829130 - 45828993
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcaca 107  Q
    ||||||||||||||||| || | ||| | ||||||||||   |||||||||||||| |||||||||||| |||||| ||||| |||| ||||||||||||    
T  45829130 acatcatcactaaaacatatagaggcattcaaatcagaacgagggaaaaagatgggatgcaaaatcgcttgtttaataacattgggtacaaaatcgcaca 45829031  T
Q  108 attggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||| |||||||| | ||||||| | |||||||||||    
T  45829030 attggtaaaagataggagtgaaaagtacaattaagcct 45828993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 9 - 144
Target Start/End: Original strand, 32703568 - 32703704
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcaca 107  Q
    ||||||||||||||   ||||||| ||   |||||||||||||||||||  || ||| ||||||||||||||||||||  ||||||||||||||||||||    
T  32703568 acatcatcactaaatgtcatggggaccataaaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcaca 32703667  T
Q  108 attggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    |||||||||  ||| ||| ||||| ||||||||||||    
T  32703668 attggcaaactataggggggaaaagtgcaattaagcc 32703704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 39 - 148
Target Start/End: Complemental strand, 28196452 - 28196342
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||||||||  ||| ||| ||||| |||||    
T  28196452 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaattataggggggaaaagtgcaa 28196353  T
Q  138 ttaagcctaat 148  Q
    |||||||||||    
T  28196352 ttaagcctaat 28196342  T

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Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 145
Target Start/End: Original strand, 28196691 - 28196828
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcaca 107  Q
    ||||||||||||||   ||||||| ||   |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||||||||||||||||||    
T  28196691 acatcatcactaaatgtcatggggaccataaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcaca 28196790  T
Q  108 attggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    |||||||||  ||| ||| ||||| |||||||||||||    
T  28196791 attggcaaactataggggggaaaagtgcaattaagcct 28196828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 16555764 - 16555871
Alignment:
Q  39 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| ||||||||||||||||||||||| |||||||||||||| ||||| ||||    
T  16555764 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagatggggtgcaaaatcgcacaattagcaaaagataagggggaaaagtgca 16555863  T
Q  137 attaagcc 144  Q
    ||||||||    
T  16555864 attaagcc 16555871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 4239314 - 4239420
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||| || ||| ||||||||||||||||||||  |||||||||||||||||||||||||||||  ||| |||  |||| |||||    
T  4239314 aaatcagaaagggggaaaaatatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaa 4239413  T
Q  138 ttaagcc 144  Q
    |||||||    
T  4239414 ttaagcc 4239420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 26 - 147
Target Start/End: Original strand, 39744400 - 39744522
Alignment:
Q  26 catgggggcctccaaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagg 124  Q
    ||||||| || | |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||| ||||  ||| ||    
T  39744400 catggggaccacaaaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggg 39744499  T
Q  125 gtgaaaaatgcaattaagcctaa 147  Q
    | ||||| |||||||||||||||    
T  39744500 gggaaaagtgcaattaagcctaa 39744522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 9380689 - 9380797
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||| ||||||||||||||||||||||||  ||| ||| ||||| |||||    
T  9380689 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggagtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 9380788  T
Q  138 ttaagccta 146  Q
    |||||||||    
T  9380789 ttaagccta 9380797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 9 - 143
Target Start/End: Complemental strand, 11529305 - 11529169
Alignment:
Q  9 acatcatcactaaaacacatg-ggggcctccaaatcagaaaaggggaaaaagatg-ggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    ||||||||||||||||| ||| |||| || ||||  | |||  ||||||| |||| ||||||||||||| || ||||||||||||||||||||||| |||    
T  11529305 acatcatcactaaaacatatgaggggacttcaaactaaaaagagggaaaatgatgtggtgcaaaatcgcacgattaaaaacatggggtgcaaaatcacac 11529206  T
Q  107 aattggcaaaagataagggtgaaaaatgcaattaagc 143  Q
    |||||||||||| || ||  ||||| |||||||||||    
T  11529205 aattggcaaaagttagggaggaaaagtgcaattaagc 11529169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 40 - 143
Target Start/End: Complemental strand, 25161983 - 25161879
Alignment:
Q  40 aatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaat 138  Q
    ||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||||||||  ||| ||| ||||| ||||||    
T  25161983 aatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaat 25161884  T
Q  139 taagc 143  Q
    |||||    
T  25161883 taagc 25161879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 26207722 - 26207801
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    |||||||||||||||| |||  |||||||||||||||||||||||||||||  ||| ||| |||||||||||||||||||    
T  26207722 gcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagcct 26207801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 66 - 144
Target Start/End: Original strand, 169415 - 169493
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| ||||  ||| ||| ||||||||||||||||||    
T  169415 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaagcc 169493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 9380413 - 9380307
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||| ||||||||||||||||||||||  ||| ||| ||||| |||||    
T  9380413 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 9380314  T
Q  138 ttaagcc 144  Q
    |||||||    
T  9380313 ttaagcc 9380307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 66 - 147
Target Start/End: Complemental strand, 9023322 - 9023241
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    |||||||| |||||||||||  |||||||||||||||||||||||||||||  ||| ||| ||||| |||||||||||||||    
T  9023322 gcaaaatcactcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggagaaaagtgcaattaagcctaa 9023241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 9023628 - 9023735
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| |||||||||||| |||||||  |||||||||||||||||||||||| ||||  ||| ||| ||||| |||||    
T  9023628 aaatcagaaagggggaaaactatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaa 9023727  T
Q  138 ttaagcct 145  Q
    ||||||||    
T  9023728 ttaagcct 9023735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 32703331 - 32703224
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  | |||||||| ||||||||||||||||||  ||| ||| ||||| |||||    
T  32703331 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactacggggtgcataatcgcacaattggcaaattataggggggaaaagtgcaa 32703232  T
Q  138 ttaagcct 145  Q
    ||||||||    
T  32703231 ttaagcct 32703224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 23540200 - 23540306
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| | ||||||||||||||||||  || ||||||||||||||||||||| ||||  ||| ||||||||| |||||    
T  23540200 aaatcagaaagggggaaaactatagggggtaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattgacaaactataggggtgaaaagtgcaa 23540299  T
Q  138 ttaagcc 144  Q
    |||||||    
T  23540300 ttaagcc 23540306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 39086571 - 39086677
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||  |||||||||||||||||||||||||  ||| ||| ||||| |||||    
T  39086571 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactattaggtgcaaaatcgcacaattggcaaactatatgggagaaaagtgcaa 39086670  T
Q  138 ttaagcc 144  Q
    |||||||    
T  39086671 ttaagcc 39086677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 148
Target Start/End: Complemental strand, 39744136 - 39744026
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||| |||||||||||||||| |||  ||| |||  |||| |||||    
T  39744136 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaattatggggtggaaaatcgcacaattggtaaactatagggggaaaaagtgcaa 39744037  T
Q  138 ttaagcctaat 148  Q
    |||||||||||    
T  39744036 ttaagcctaat 39744026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 144
Target Start/End: Original strand, 43292333 - 43292411
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||||||||  | | ||| ||||||||||||||||||    
T  43292333 gcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattggcaaactaaaggggggaaaaatgcaattaagcc 43292411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 147
Target Start/End: Complemental strand, 16555605 - 16555512
Alignment:
Q  55 aaaagatgggtgcaaaatcgctcgtttaaaaac-atggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    |||||||||||||||||||||||    |||||  | |||||||||||||||||||||  ||||||||||||| ||||| |||||||||||||||    
T  16555605 aaaagatgggtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataagggggaaaagtgcaattaagcctaa 16555512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 169092 - 169012
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagata-agggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||  |||  ||| ||||| |||||||||||||    
T  169092 gcaaaatcgctcgtttaaaattatggggtgcaaaatcgcacaattggcaaactatagggggagaaaagtgcaattaagcct 169012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 145
Target Start/End: Original strand, 293152 - 293272
Alignment:
Q  26 catgggggcctccaaatcagaaaaggggaaaaagatg-ggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagg 124  Q
    ||||||||||   |||||||||| ||||||||  ||  || ||||||||||||||||||||  |||||||||||||||||||||||| ||||  ||| ||    
T  293152 catgggggccataaaatcagaaagggggaaaactatacggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggg 293251  T
Q  125 gtgaaaaatgcaattaagcct 145  Q
    |  |||| |||||||||||||    
T  293252 ggaaaaagtgcaattaagcct 293272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 148
Target Start/End: Complemental strand, 292860 - 292778
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaat 148  Q
    ||||||||||||||||||||  ||| | |||||||| ||||||||||||||  ||| ||| ||||| ||||||||||||||||    
T  292860 gcaaaatcgctcgtttaaaactatgagatgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaagcctaat 292778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 56 - 145
Target Start/End: Original strand, 18077167 - 18077257
Alignment:
Q  56 aaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||| |||||||||||||    ||||| | ||||||||||||||||||||| |||||| ||| ||||||||| |||||||||||||    
T  18077167 aaagatgggatgcaaaatcgctcaacaaaaaagagggggtgcaaaatcgcacaattagcaaaaaataggggtgaaaagtgcaattaagcct 18077257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 3930427 - 3930535
Alignment:
Q  39 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||| |||| ||||||||||| ||||||||||||     ||||| | ||||||||||||||||||||| ||||||||| |||| ||||| ||||    
T  3930427 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctaaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagat-agggggaaaagtgca 3930525  T
Q  137 attaagccta 146  Q
    ||||||||||    
T  3930526 attaagccta 3930535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 13198711 - 13198606
Alignment:
Q  39 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaac-atggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgc 135  Q
    |||||||||| |||| ||||||||||| |||||||||||||    |||||  | ||||||||||||||||||||||||||||||||| || ||||| |||    
T  13198711 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataaaggagaaaagtgc 13198612  T
Q  136 aattaa 141  Q
    ||||||    
T  13198611 aattaa 13198606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 43292115 - 43292038
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagc 143  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| ||||  ||| |||  |||| |||||||||||    
T  43292115 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggaaaaaagtgcaattaagc 43292038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 9 - 145
Target Start/End: Complemental strand, 48406097 - 48405961
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcaca 107  Q
    ||||||||||||||   ||||||| ||   || ||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||| ||| |    
T  48406097 acatcatcactaaatgtcatggggaccataaagtcagaaagggggaaaattatagggggcaaaatcgctcgtttaaaactatggggtgcaaaattgcata 48405998  T
Q  108 attggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    |||||||||  || |||| ||||| |||||||||||||    
T  48405997 attggcaaactat-agggggaaaagtgcaattaagcct 48405961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 26207438 - 26207360
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    |||||||||||||||| |||  |||||||||||||||||||||||||||||  || |||| | ||| |||||||||||||    
T  26207438 gcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaactat-aggggggaaagtgcaattaagcct 26207360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 62 - 145
Target Start/End: Original strand, 35393749 - 35393830
Alignment:
Q  62 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    |||||||||||||||| |  ||||| | |||||||||| |||||||||| |||||||||| ||||||||| |||||||||||||    
T  35393749 gggtgcaaaatcgctcata-aaaaagagggggtgcaaattcgcacaattagcaaaagata-gggtgaaaagtgcaattaagcct 35393830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 148
Target Start/End: Original strand, 11241653 - 11241718
Alignment:
Q  82 aaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaat 148  Q
    ||||| ||||||||||||||| ||||||||||||||||| |||| ||||| | ||||||||||||||    
T  11241653 aaaaagatggggtgcaaaatcccacaattggcaaaagat-agggggaaaagtacaattaagcctaat 11241718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 116
Target Start/End: Complemental strand, 23539945 - 23539867
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    |||||||||| | ||||||| || ||| ||||||||| |||||| |||  |||||||||||||||||||||||||||||    
T  23539945 aaatcagaaaggaggaaaaatatagggggcaaaatcgttcgttttaaactatggggtgcaaaatcgcacaattggcaaa 23539867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 145
Target Start/End: Original strand, 24775776 - 24775838
Alignment:
Q  83 aaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    |||| |||||||||||||||||||||||| ||||||||| | | ||||| |||||||||||||    
T  24775776 aaaagatggggtgcaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaagcct 24775838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 44468899 - 44468949
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    ||||||||||||||||||||  ||| |||||||||||||||||||||||||    
T  44468899 gcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaa 44468949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 48406361 - 48406411
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    ||||||||||||||||||||  || ||||||||||||||||||||||||||    
T  48406361 gcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaa 48406411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 90 - 140
Target Start/End: Original strand, 49178816 - 49178866
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaatta 140  Q
    |||||||||||||||||||||||||||||||| ||| ||||| ||||||||    
T  49178816 ggggtgcaaaatcgcacaattggcaaaagataggggagaaaagtgcaatta 49178866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 13198906 - 13198961
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    |||||||||||||||||||||  ||||||||| ||| ||||| |||||||||||||    
T  13198906 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcct 13198961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 25162261 - 25162340
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaa 117  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||| |||||||||| |||||||| |||||    
T  25162261 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggagtgcaaaatcacacaattgacaaaa 25162340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 143
Target Start/End: Original strand, 23433433 - 23433538
Alignment:
Q  38 caaatcagaaaaggggaaaaagatgggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    ||||||||||| ||| |||||   ||||||||||||||||  ||||||| |  || |||| ||||||||||||| ||||||||||| |  | || |||||    
T  23433433 caaatcagaaaggggcaaaaaagagggtgcaaaatcgctcacttaaaaagaaaggatgcacaatcgcacaattgacaaaagataagaggcagaagtgcaa 23433532  T
Q  138 ttaagc 143  Q
    ||||||    
T  23433533 ttaagc 23433538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 8182172 - 8182228
Alignment:
Q  90 ggggtgcaaaatcgcacaattggc-aaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||||||||||| || |||| ||| ||||||||| |||||||||||||    
T  8182172 ggggtgcaaaatcgcacaattagcaaaaaaataggggtgaaaagtgcaattaagcct 8182228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 8488242 - 8488187
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    |||||||||||||||||||||  ||||||||| ||   ||||||||||||||||||    
T  8488242 ggggtgcaaaatcgcacaattaacaaaagatatggaaaaaaaatgcaattaagcct 8488187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 121
Target Start/End: Complemental strand, 39415306 - 39415247
Alignment:
Q  62 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagata 121  Q
    ||||||||||||||||   |||||| |  |||||||||||||||||||| ||||||||||    
T  39415306 gggtgcaaaatcgctcaaataaaaagagagggtgcaaaatcgcacaattagcaaaagata 39415247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 144
Target Start/End: Original strand, 5206222 - 5206283
Alignment:
Q  82 aaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||| || ||||||||||||||||||||   |||||||||||| ||||| ||||||||||||    
T  5206222 aaaaagatagggtgcaaaatcgcacaattaa-aaaagataagggggaaaagtgcaattaagcc 5206283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 8182046 - 8181992
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaa-gataagggtgaaaaatgcaattaagc 143  Q
    |||||||||||||||||||||||||||| |||| |||  |||| |||||||||||    
T  8182046 ggggtgcaaaatcgcacaattggcaaaacgatagggggcaaaagtgcaattaagc 8181992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 144
Target Start/End: Complemental strand, 11241439 - 11241389
Alignment:
Q  94 tgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    |||||||||||||||||  ||||||||||||  ||||| ||||||||||||    
T  11241439 tgcaaaatcgcacaattaacaaaagataaggaggaaaagtgcaattaagcc 11241389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 22681628 - 22681563
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaataaatataa 156  Q
    |||||||||||||||||||||| |||||||| |||| | ||| |||||||||||  | |||||||||    
T  22681628 ggggtgcaaaatcgcacaattgacaaaagat-aggggggaaagtgcaattaagctaattaaatataa 22681563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 121
Target Start/End: Original strand, 25225399 - 25225429
Alignment:
Q  91 gggtgcaaaatcgcacaattggcaaaagata 121  Q
    |||||||||||||||||||||||||||||||    
T  25225399 gggtgcaaaatcgcacaattggcaaaagata 25225429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 8488482 - 8488534
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagc 143  Q
    ||||||||||||||||||||| | ||||||||| || ||||| |||||||||||    
T  8488482 ggggtgcaaaatcgcacaattagaaaaagataa-ggcgaaaagtgcaattaagc 8488534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 116
Target Start/End: Complemental strand, 12757843 - 12757794
Alignment:
Q  67 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    |||||||||||||||||||  ||| | |||||||||||||||||| ||||    
T  12757843 caaaatcgctcgtttaaaactatgagatgcaaaatcgcacaattgacaaa 12757794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 146
Target Start/End: Complemental strand, 23432559 - 23432474
Alignment:
Q  62 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggc-aaaagataagggtgaaaaatgcaattaagccta 146  Q
    ||||||||||| | || |||||||| |||||||||| ||| ||||||||| | |||| ||| |||  |||| ||||||||||||||    
T  23432559 gggtgcaaaattgttcatttaaaaagatggggtgcagaattgcacaattgacaaaaaaatagggggcaaaagtgcaattaagccta 23432474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 111
Target Start/End: Original strand, 39912463 - 39912508
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattg 111  Q
    |||||||| |||||||||||  ||||| ||||||||||||||||||    
T  39912463 gcaaaatcactcgtttaaaactatgggatgcaaaatcgcacaattg 39912508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 147
Target Start/End: Complemental strand, 5206049 - 5205985
Alignment:
Q  83 aaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    |||| |||||||||||||||||  ||||  ||||||||| ||  ||||| |||||||||||||||    
T  5206049 aaaagatggggtgcaaaatcgccaaattaacaaaagatagggaggaaaagtgcaattaagcctaa 5205985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 11530170 - 11530225
Alignment:
Q  61 tgggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaa 117  Q
    ||||||||||||||| || ||||||| || |||| ||||||||||||||||| ||||    
T  11530170 tgggtgcaaaatcgcacgattaaaaatat-gggttcaaaatcgcacaattggtaaaa 11530225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 139
Target Start/End: Original strand, 16555695 - 16555743
Alignment:
Q  92 ggtgcaaaatcgcacaattggc-aaaagataagggtgaaaaatgcaatt 139  Q
    ||||||||||||||||||| || |||||||||||| ||||| |||||||    
T  16555695 ggtgcaaaatcgcacaattagcaaaaagataagggggaaaagtgcaatt 16555743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 151
Target Start/End: Complemental strand, 49178574 - 49178526
Alignment:
Q  103 gcacaattggcaaaagataagggtgaaaaatgcaattaagcctaataaa 151  Q
    |||||||| |||||||||| ||| ||||| |||||||||||| ||||||    
T  49178574 gcacaattagcaaaagatatgggagaaaagtgcaattaagccaaataaa 49178526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 98; Significance: 2e-48; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 29 - 145
Target Start/End: Complemental strand, 49284525 - 49284408
Alignment:
Q  29 gggggcctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtg 127  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  49284525 gggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataggggtg 49284426  T
Q  128 aaaaatgcaattaagcct 145  Q
    |||| |||||||||||||    
T  49284425 aaaagtgcaattaagcct 49284408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 6002374 - 6002237
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    |||||||||||||||  |||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  6002374 acatcatcactaaaattcatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcacac 6002275  T
Q  107 aattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||| ||||||||| ||||||||| ||||||||||||    
T  6002274 aattgacaaaagataggggtgaaaagtgcaattaagcc 6002237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 142
Target Start/End: Original strand, 6002810 - 6002946
Alignment:
Q  9 acatcatcactaaaacacatggggg--cctccaaatcagaaaaggggaaaaagatg-ggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgca 105  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  6002810 acatcatcactaaaacacatgggggggcctccaaatcagaaagggggaaaaagatgaggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgca 6002909  T
Q  106 caattggcaaaagataagggtgaaaaatgcaattaag 142  Q
    ||||||  |||||||| || |||||| ||||||||||    
T  6002910 caattgcgaaaagatagggatgaaaagtgcaattaag 6002946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 49284972 - 49285086
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  49284972 acatcatcactaaaacacatggggggcctccaaatcagaaagggggaaaaagatggggtgcaaaatcgcttgtttaaaaacatggggtgcaaaatcgcac 49285071  T
Q  107 aattggcaaaagata 121  Q
    |||||||||||||||    
T  49285072 aattggcaaaagata 49285086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 39691948 - 39692055
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| |||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||| ||||| ||| ||| ||||| |||||    
T  39691948 aaatcagaaagggggaaaaagatagggtgcaaaatcacacgtttaaaaacatggggtgcaaaatcgcacaattgacaaaatataggggggaaaagtgcaa 39692047  T
Q  138 ttaagcct 145  Q
    ||||||||    
T  39692048 ttaagcct 39692055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 48105064 - 48105170
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||||||||  ||||||| ||||| |||||    
T  48105064 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaa 48105163  T
Q  138 ttaagcc 144  Q
    |||||||    
T  48105164 ttaagcc 48105170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 28633826 - 28633718
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||| ||||||||||||  ||||||| ||||| |||||    
T  28633826 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgtacaattggcaaactataagggggaaaagtgcaa 28633727  T
Q  138 ttaagccta 146  Q
    |||||||||    
T  28633726 ttaagccta 28633718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 9347232 - 9347126
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||||||||  ||| ||| ||||| |||||    
T  9347232 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 9347133  T
Q  138 ttaagcc 144  Q
    |||||||    
T  9347132 ttaagcc 9347126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 82 - 156
Target Start/End: Complemental strand, 48190833 - 48190759
Alignment:
Q  82 aaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaataaatataa 156  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| || ||||||||    
T  48190833 aaaaagatggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagccaaaaaaatataa 48190759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 44911131 - 44911022
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| |||||||||||||||| |||  |||||||||||||||||||||||||||||| ||| ||| | ||| |||||    
T  44911131 aaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaacaatggggtgcaaaatcgcacaattggcaaaatatagggggggaaagtgcaa 44911032  T
Q  138 ttaagcctaa 147  Q
    ||||||||||    
T  44911031 ttaagcctaa 44911022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 66 - 146
Target Start/End: Original strand, 32163019 - 32163099
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagccta 146  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||  ||| ||| ||||| ||||||||||||||    
T  32163019 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagccta 32163099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 47955413 - 47955305
Alignment:
Q  39 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | |||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  47955413 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgca 47955314  T
Q  137 attaagcct 145  Q
    |||||||||    
T  47955313 attaagcct 47955305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 27172221 - 27172116
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||||||||  || |||| ||||| |||||    
T  27172221 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactat-agggggaaaagtgcaa 27172123  T
Q  138 ttaagcc 144  Q
    |||||||    
T  27172122 ttaagcc 27172116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 27172490 - 27172596
Alignment:
Q  39 aaatcagaaaaggggaaaaagatgggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaat 138  Q
    |||||||||| ||||||||  || || ||||||||||||||||||||  ||||| |||||||||||||||||||||||  | | ||| ||||| ||||||    
T  27172490 aaatcagaaagggggaaaactataggggcaaaatcgctcgtttaaaacaatgggatgcaaaatcgcacaattggcaaagtacaggggggaaaagtgcaat 27172589  T
Q  139 taagcct 145  Q
    |||||||    
T  27172590 taagcct 27172596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 26815067 - 26815175
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||||||||||||||||||||||  |||  ||| ||| ||||| |||||    
T  26815067 aaatcagaaagggggaaaattatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaa 26815166  T
Q  138 ttaagccta 146  Q
    |||||||||    
T  26815167 ttaagccta 26815175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 50526420 - 50526524
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||||||||  ||| |||  |||| |||||    
T  50526420 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaa 50526519  T
Q  138 ttaag 142  Q
    |||||    
T  50526520 ttaag 50526524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 8108985 - 8109048
Alignment:
Q  82 aaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||| |||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  8108985 aaaaagatggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcct 8109048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 20480273 - 20480167
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||| ||||  || |||| ||||| |||||    
T  20480273 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactat-agggggaaaagtgcaa 20480175  T
Q  138 ttaagcct 145  Q
    ||||||||    
T  20480174 ttaagcct 20480167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 66 - 141
Target Start/End: Complemental strand, 42611263 - 42611188
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaa 141  Q
    ||||||||||||||||||||  ||| |||||||||||||||||||||||||  ||||||| ||||| |||||||||    
T  42611263 gcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaa 42611188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 46823949 - 46823846
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||| ||||||||||||||||||||||||  ||| ||| ||||| |||||    
T  46823949 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggagtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 46823850  T
Q  138 ttaa 141  Q
    ||||    
T  46823849 ttaa 46823846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 141
Target Start/End: Complemental strand, 48104784 - 48104681
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||| ||||  ||| ||| ||||| |||||    
T  48104784 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgccaaactataggggggaaaagtgcaa 48104685  T
Q  138 ttaa 141  Q
    ||||    
T  48104684 ttaa 48104681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 146
Target Start/End: Original strand, 48191348 - 48191411
Alignment:
Q  83 aaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagccta 146  Q
    |||| ||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||    
T  48191348 aaaagatggggtgcaaaatcgcaccattggcaaaagataggggtgaaaagtgcaattaagccta 48191411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 66 - 141
Target Start/End: Original strand, 50430057 - 50430132
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaa 141  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||  ||| ||| ||||| |||||||||    
T  50430057 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 50430132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 144
Target Start/End: Original strand, 6703870 - 6703948
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||||||||||||||  |||||||||||||| ||||||||||||||  ||| ||| ||||| ||||||||||||    
T  6703870 gcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggggagaaaagtgcaattaagcc 6703948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 116
Target Start/End: Complemental strand, 13918552 - 13918474
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  13918552 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 13918474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 26814800 - 26814694
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||| ||||  ||| ||  ||||| |||||    
T  26814800 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaa 26814701  T
Q  138 ttaagcc 144  Q
    |||||||    
T  26814700 ttaagcc 26814694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 6703566 - 6703457
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||||||||||||  || ||| ||||||||||||||||||||  ||| ||||||||||||||||||||| |||  ||| | |  |||| |||||    
T  6703566 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggtaaactataggaggaaaaagtgcaa 6703467  T
Q  138 ttaagcctaa 147  Q
    ||||||||||    
T  6703466 ttaagcctaa 6703457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 999473 - 999580
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  ||||| ||||||||||||||||||||||   || |||| ||||| |||||    
T  999473 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggttgcaaaatcgcacaattggcaatctat-agggggaaaagtgcaa 999571  T
Q  138 ttaagccta 146  Q
    |||||||||    
T  999572 ttaagccta 999580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 9347499 - 9347606
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||| ||||||||||||||  || |||| | ||| |||||    
T  9347499 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactat-aggggggaaagtgcaa 9347597  T
Q  138 ttaagccta 146  Q
    |||||||||    
T  9347598 ttaagccta 9347606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 39 - 142
Target Start/End: Original strand, 17518551 - 17518653
Alignment:
Q  39 aaatcagaaaagggg-aaaaagatgggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| |||| ||||||||||||||||||| ||||    ||||| | ||||||||||||||||||||||||||||||| |||| ||||| |||||    
T  17518551 aaatcagaaagggggcaaaaagatgggtgcaaaattgctcaaa-aaaaagagggggtgcaaaatcgcacaattggcaaaagat-agggggaaaagtgcaa 17518648  T
Q  138 ttaag 142  Q
    |||||    
T  17518649 ttaag 17518653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 28634105 - 28634213
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||| ||||||||||  |||||||||||||||||||||||| ||||  ||| ||| ||||| |||||    
T  28634105 aaatcagaaagggggaaaactatagggggcaaaatcgatcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaa 28634204  T
Q  138 ttaagccta 146  Q
    |||| ||||    
T  28634205 ttaaaccta 28634213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 50615569 - 50615674
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| |||||||||||| |||||||  |||||||||||||||||||||||| ||||  || |||| ||||| |||||    
T  50615569 aaatcagaaagggggaaaactatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactat-agggggaaaagtgcaa 50615667  T
Q  138 ttaagcc 144  Q
    |||||||    
T  50615668 ttaagcc 50615674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 50623397 - 50623502
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| |||||||||||| |||||||  |||||||||||||||||||||||| ||||  || |||| ||||| |||||    
T  50623397 aaatcagaaagggggaaaactatagggggcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattgacaaactat-agggggaaaagtgcaa 50623495  T
Q  138 ttaagcc 144  Q
    |||||||    
T  50623496 ttaagcc 50623502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 68 - 145
Target Start/End: Original strand, 4692411 - 4692488
Alignment:
Q  68 aaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||||||||  |||||||||||||| ||||||||||||||  ||| |||  |||| |||||||||||||    
T  4692411 aaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactatagggggaaaaagtgcaattaagcct 4692488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 20480591 - 20480671
Alignment:
Q  69 aaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaataa 150  Q
    |||||||||||||||||  || ||||||||||||||||||||||||||  || |||| ||||| |||||||||||| |||||    
T  20480591 aaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaactat-agggggaaaagtgcaattaagccaaataa 20480671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 39 - 151
Target Start/End: Original strand, 49318114 - 49318226
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| |||||||||||||||| |||  ||||| |||||||||||||||||||||||  || |||| | ||| |||||    
T  49318114 aaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaactatgggatgcaaaatcgcacaattggcaaactat-aggggggaaagtgcaa 49318212  T
Q  138 ttaagcctaataaa 151  Q
    ||||||| ||||||    
T  49318213 ttaagccaaataaa 49318226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 146
Target Start/End: Original strand, 44911413 - 44911493
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagccta 146  Q
    |||||||||||||||| |||  || ||||||||||||||||||||||||||  ||| |||  |||||||||||||| ||||    
T  44911413 gcaaaatcgctcgttttaaacaatagggtgcaaaatcgcacaattggcaaactatagggggaaaaaatgcaattaaaccta 44911493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 48191302 - 48191369
Alignment:
Q  9 acatcatcactaaaacacat-gggggcctccaaatcagaaaaggggaaaaagat-gggtgcaaaatcgc 75  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||| ||||||| ||||||||||||||    
T  48191302 acatcatcactaaaacacatggggggcctccaaatcag-aaagggggaaaagatggggtgcaaaatcgc 48191369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 46824254 - 46824333
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||||||||||  |||||||||||||| ||||||||||||||  ||| | |  |||| |||||||||||||    
T  46824254 gcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattggcaaactataggaggaaaaagtgcaattaagcct 46824333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 50429734 - 50429655
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||||||||||  ||| ||||||||||||||||||| |||||  |||| || ||||| | |||||||||||    
T  50429734 gcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattagcaaattataaaggggaaaagtacaattaagcct 50429655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 38 - 147
Target Start/End: Original strand, 19008697 - 19008807
Alignment:
Q  38 caaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    ||||||||||| ||||||||  || ||| ||||||| || ||||| |||  ||||||||||||||||||||||||  |||  ||| ||| ||||| ||||    
T  19008697 caaatcagaaagggggaaaattatagggggcaaaattgcacgttttaaactatggggtgcaaaatcgcacaattgcgaaactataggggggaaaagtgca 19008796  T
Q  137 attaagcctaa 147  Q
    |||||||||||    
T  19008797 attaagcctaa 19008807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 144
Target Start/End: Complemental strand, 21687103 - 21687025
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||||||||||||||  ||||||||||||||  |||||||| ||||  ||| ||| ||||| ||||||||||||    
T  21687103 gcaaaatcgctcgtttaaaactatggggtgcaaaattacacaattgacaaactataggggggaaaagtgcaattaagcc 21687025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 49317857 - 49317752
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| | ||||||||||||||||||  ||||| |||||||| ||||||||||||||  || |||| ||||| |||||    
T  49317857 aaatcagaaagggggaaaactatagggggtaaaatcgctcgtttaaaactatgggatgcaaaattgcacaattggcaaactat-agggggaaaagtgcaa 49317759  T
Q  138 ttaagcc 144  Q
    |||||||    
T  49317758 ttaagcc 49317752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 143
Target Start/End: Original strand, 13918843 - 13918920
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagc 143  Q
    ||||||||| ||||||||||  ||| |||||||||||||||||||||||||  ||| ||  ||||| |||||||||||    
T  13918843 gcaaaatcgttcgtttaaaactatgaggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaagc 13918920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 147
Target Start/End: Complemental strand, 17518384 - 17518300
Alignment:
Q  62 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    ||||||||||||||||    ||||| | |||||||||||||||||||||  ||||||||||||| ||||  |||||||||||||||    
T  17518384 gggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataaggg-gaaaggtgcaattaagcctaa 17518300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 146
Target Start/End: Original strand, 31848166 - 31848248
Alignment:
Q  62 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagccta 146  Q
    |||||||||||||||||   ||||| | |||||||||||||| ||||||  ||||||||| ||| ||||| ||||||||||||||    
T  31848166 gggtgcaaaatcgctcga--aaaaagagggggtgcaaaatcgtacaattaacaaaagataggggagaaaagtgcaattaagccta 31848248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 22149649 - 22149750
Alignment:
Q  39 aaatcagaaaaggggaaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||| ||||||||||| ||||||||||||     ||||| | | ||||||||||||||||||| |||||||||| ||| ||||| |||||    
T  22149649 aaatcagaaaggggcaaaaagatggggtgcaaaatcgctaaa--aaaaaaaggaggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaa 22149746  T
Q  138 ttaa 141  Q
    ||||    
T  22149747 ttaa 22149750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 33085775 - 33085670
Alignment:
Q  39 aaatcagaaaaggggaaaaagatg-ggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| | |||||| |||| |||||||||||| |||||||||  ||||||||||||||||  ||||||| ||||| ||| ||  ||||| | |||    
T  33085775 aaatcagaaaggaggaaaaggatgaggtgcaaaatcgttcgtttaaa--catggggtgcaaaatcaaacaattgacaaaatatagggtggaaaagtacaa 33085678  T
Q  138 ttaagcct 145  Q
    ||||||||    
T  33085677 ttaagcct 33085670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 146
Target Start/End: Original strand, 47955580 - 47955664
Alignment:
Q  62 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagccta 146  Q
    ||||||||||||||||    ||||| | |||||||||||||||||||||   |||||||| ||| ||||| ||||||||||||||    
T  47955580 gggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaataaaagataggggggaaaagtgcaattaagccta 47955664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 48190879 - 48190811
Alignment:
Q  9 acatcatcactaaaacacatggggg-cctccaaatcagaaaaggggaaaaagat-gggtgcaaaatcgc 75  Q
    |||||||||||||||  |||||||| ||||||||| ||||| |||||||||||| ||||||||||||||    
T  48190879 acatcatcactaaaattcatggggggcctccaaattagaaagggggaaaaagatggggtgcaaaatcgc 48190811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 144
Target Start/End: Original strand, 49318421 - 49318496
Alignment:
Q  68 aaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||||||||||||  ||||| ||||||||||||||||||  |||  || |||| ||||||||||||||||||    
T  49318421 aaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgataaactat-agggggaaaaatgcaattaagcc 49318496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 141
Target Start/End: Complemental strand, 999189 - 999115
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaa 141  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||| ||||  || |||| ||||| |||||||||    
T  999189 gcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactat-agggggaaaagtgcaattaa 999115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 13589659 - 13589713
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||||||||||| ||||||||| |||| ||||| |||||||||||||    
T  13589659 ggggtgcaaaatcgcacaattagcaaaagat-agggggaaaagtgcaattaagcct 13589713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 144
Target Start/End: Original strand, 20371328 - 20371406
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||| ||||||||||||  |||||| |||||||||||||||||||||||  || |||| ||||| ||||||||||||    
T  20371328 gcaaaattgctcgtttaaaactatgggggtgcaaaatcgcacaattggcaaactat-agggggaaaagtgcaattaagcc 20371406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 24671338 - 24671283
Alignment:
Q  62 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaa 117  Q
    ||||||||||||||||  ||||||  |||| |||||||||||||||||||||||||    
T  24671338 gggtgcaaaatcgctcaattaaaaggatggagtgcaaaatcgcacaattggcaaaa 24671283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 141
Target Start/End: Original strand, 42611590 - 42611665
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaa 141  Q
    ||||||||||| ||||||||  ||| |||||||||||||||||||| ||||  ||| ||| ||||| |||||||||    
T  42611590 gcaaaatcgcttgtttaaaactatgaggtgcaaaatcgcacaattgacaaactataggggagaaaagtgcaattaa 42611665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 20371116 - 20371066
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    ||||||||||||||||||||  |||||||||||||| ||||||||| ||||    
T  20371116 gcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattgacaaa 20371066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 141
Target Start/End: Complemental strand, 31848002 - 31847898
Alignment:
Q  38 caaatcagaaaagggg-aaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgc 135  Q
    |||| |||||| |||| |||||||| ||||||||||||||||    ||||| ||||| |||||||| |||||||| |||||||||||||| | ||| |||    
T  31848002 caaaccagaaagggggcaaaaagatcgggtgcaaaatcgctcaaa-aaaaatatgggatgcaaaattgcacaattagcaaaagataagggggtaaagtgc 31847904  T
Q  136 aattaa 141  Q
    ||||||    
T  31847903 aattaa 31847898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 21687445 - 21687493
Alignment:
Q  68 aaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    ||||||||||||||||||  ||| ||| |||||||||||||||||||||    
T  21687445 aaaatcgctcgtttaaaactatgaggtacaaaatcgcacaattggcaaa 21687493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 41083015 - 41082909
Alignment:
Q  39 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||| |||| ||||||||||| ||||||||||||     ||||| | ||| |||||||||||||||||||||||||||| |||  |||| | ||    
T  41083015 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctaaaa-aaaaagaggggatgcaaaatcgcacaattggcaaaagatagggggaaaaagtaca 41082917  T
Q  137 attaagcc 144  Q
    ||||||||    
T  41082916 attaagcc 41082909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 116
Target Start/End: Complemental strand, 32162799 - 32162757
Alignment:
Q  74 gctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    ||||||||||||  |||||||||||||| ||||||||||||||    
T  32162799 gctcgtttaaaactatggggtgcaaaattgcacaattggcaaa 32162757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 47498377 - 47498327
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    ||||||||||| ||||||||  ||||| |||||||| ||||||||||||||    
T  47498377 gcaaaatcgcttgtttaaaactatgggatgcaaaattgcacaattggcaaa 47498327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 114
Target Start/End: Complemental strand, 50949237 - 50949191
Alignment:
Q  68 aaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggca 114  Q
    |||||||||||||| |||  ||| |||||||||||||||||||||||    
T  50949237 aaaatcgctcgttttaaacaatgaggtgcaaaatcgcacaattggca 50949191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 90 - 151
Target Start/End: Complemental strand, 8108775 - 8108714
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaataaa 151  Q
    |||||||||||||||||||||  ||||||||| ||  ||||| ||||||||| |||| ||||    
T  8108775 ggggtgcaaaatcgcacaattaacaaaagatagggaggaaaagtgcaattaaacctattaaa 8108714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 112
Target Start/End: Original strand, 44224096 - 44224141
Alignment:
Q  67 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattgg 112  Q
    |||||||||||||||||||  ||||| ||||||||| |||||||||    
T  44224096 caaaatcgctcgtttaaaactatgggatgcaaaatcacacaattgg 44224141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 39690847 - 39690791
Alignment:
Q  91 gggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    ||||||||||||||||||||||| ||| ||| |||  |||| ||||| |||||||||    
T  39690847 gggtgcaaaatcgcacaattggccaaatatagggggaaaaagtgcaactaagcctaa 39690791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 146
Target Start/End: Original strand, 41083211 - 41083266
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagccta 146  Q
    ||||||||||||||||||| |  |||||||| |||| ||||| ||||||||||||||    
T  41083211 ggggtgcaaaatcgcacaactaacaaaagat-agggggaaaagtgcaattaagccta 41083266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 146
Target Start/End: Original strand, 50949541 - 50949621
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagccta 146  Q
    |||||||||||||||| |||  ||| | |||||||||||||||||| ||||  ||| ||| | ||| |||||||| |||||    
T  50949541 gcaaaatcgctcgttttaaacaatgagatgcaaaatcgcacaattgacaaactatagggggggaaagtgcaattatgccta 50949621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 148
Target Start/End: Original strand, 1928351 - 1928491
Alignment:
Q  9 acatcatcactaaaacacatgggggcc-tccaaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcac 106  Q
    ||||||||||||||||| ||||||||| | |||| ||||||||||||||| ||| |||||||||| | |||||||||||| |||||||||||||||||||    
T  1928351 acatcatcactaaaacatatgggggcccttcaaaccagaaaaggggaaaaggatagggtgcaaaaccactcgtttaaaaatatggggtgcaaaatcgcac 1928450  T
Q  107 aattggcaaaagataagggtgaaaaatgcaattaagcctaat 148  Q
    |||||||||||||| |||| | ||||||||||||| ||||||    
T  1928451 aattggcaaaagat-agggaggaaaatgcaattaaacctaat 1928491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 8314119 - 8314013
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| |||||||| ||| |||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| ||| ||| ||||| |||||    
T  8314119 aaatcagaaagggggaaaatgatagggtgcaaaatcgcacgtttaaaaacattgggtgcaaaatcgcacaattgacaaaatataggggagaaaagtgcaa 8314020  T
Q  138 ttaagcc 144  Q
    |||||||    
T  8314019 ttaagcc 8314013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 147
Target Start/End: Complemental strand, 10771629 - 10771501
Alignment:
Q  17 actaaaacacatgggggcctccaaatcagaaaaggggaaaaagatgggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    |||||||||||||||||||| |||| |||||| ||| |||| ||| |||| ||||||||||| |||||||||||| ||  ||||||||||||||| ||||    
T  10771629 actaaaacacatgggggccttcaaaccagaaa-gggaaaaatgataggtgtaaaatcgctcggttaaaaacatggagtaaaaaatcgcacaattgacaaa 10771531  T
Q  117 agataagggtgaaaaatgcaattaagcctaa 147  Q
    |||| ||||  ||||||||||||||||||||    
T  10771530 agat-agggaaaaaaatgcaattaagcctaa 10771501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 48160003 - 48159895
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||||||||  ||| ||| ||||| |||||    
T  48160003 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 48159904  T
Q  138 ttaagccta 146  Q
    |||||||||    
T  48159903 ttaagccta 48159895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 62 - 144
Target Start/End: Original strand, 21896483 - 21896564
Alignment:
Q  62 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||| || ||||  |||||||||||||||||    
T  21896483 gggtgcaaaatcgctcgtataaaaccatggggtgcaaaatcgcacaattgacaaaatat-aggggaaaaaatgcaattaagcc 21896564  T

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Target: chr3; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 154
Target Start/End: Original strand, 48160309 - 48160397
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaataaatat 154  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||  ||| ||| | ||| |||||||||||| || ||||||    
T  48160309 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggggggaaagtgcaattaagccaaaaaaatat 48160397  T

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Target: chr3; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 10293715 - 10293608
Alignment:
Q  39 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | |||||||||||||||||||||| ||||||||| |||  |||||||||    
T  10293715 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattgacaaaagataggggaaaaaaatgca 10293616  T
Q  137 attaagcc 144  Q
    ||||||||    
T  10293615 attaagcc 10293608  T

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Target: chr3; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 20968967 - 20969073
Alignment:
Q  39 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | |||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  20968967 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaaaa-ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgca 20969065  T
Q  137 attaagcc 144  Q
    ||||||||    
T  20969066 attaagcc 20969073  T

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Target: chr3; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 141
Target Start/End: Original strand, 27238848 - 27238951
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||||||||  |||  || ||||| |||||    
T  27238848 aaatcagaaagggggaaaactatagggagcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaa 27238947  T
Q  138 ttaa 141  Q
    ||||    
T  27238948 ttaa 27238951  T

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Target: chr3; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 40848626 - 40848520
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||| ||||||||||||||||||||  || |||| ||||| |||||    
T  40848626 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgtaaaatcgcacaattggcaaactat-agggggaaaagtgcaa 40848528  T
Q  138 ttaagcct 145  Q
    ||||||||    
T  40848527 ttaagcct 40848520  T

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Target: chr3; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 53687994 - 53687887
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| | ||||||||||||||||||  |||||||||||||||||||||||| ||||  ||| ||| ||||| |||||    
T  53687994 aaatcagaaagggggaaaactatagggggtaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaa 53687895  T
Q  138 ttaagcct 145  Q
    ||||||||    
T  53687894 ttaagcct 53687887  T

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Target: chr3; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 42673244 - 42673349
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||||||||||||||||||||| ||||  || |||| ||||| |||||    
T  42673244 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactat-agggggaaaagtgcaa 42673342  T
Q  138 ttaagcc 144  Q
    |||||||    
T  42673343 ttaagcc 42673349  T

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Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 47666283 - 47666389
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| |||||||||||||||| |||  |||||||||||||| ||||||||||||||  ||| ||| ||||| |||||    
T  47666283 aaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaacaatggggtgcaaaattgcacaattggcaaactataggggggaaaagtgcaa 47666382  T
Q  138 ttaagcc 144  Q
    |||||||    
T  47666383 ttaagcc 47666389  T

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Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 154
Target Start/End: Complemental strand, 3353202 - 3353118
Alignment:
Q  69 aaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaataaatat 154  Q
    |||||||||||||||||  |||||||||||||||||||||||| ||||  || |||| ||||| |||||||||||| |||||||||    
T  3353202 aaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactat-agggggaaaagtgcaattaagccaaataaatat 3353118  T

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Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 143
Target Start/End: Complemental strand, 22429264 - 22429159
Alignment:
Q  39 aaatcagaaaaggggaaaaagatgggtg-caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || || | |||||||||||||||||||  || ||||||||| ||||||||||||||||| ||| ||| ||||| |||||    
T  22429264 aaatcagaaagggggaaaactataggggacaaaatcgctcgtttaaaactattgggtgcaaagtcgcacaattggcaaaatataggggagaaaagtgcaa 22429165  T
Q  138 ttaagc 143  Q
    ||||||    
T  22429164 ttaagc 22429159  T

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Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 39 - 147
Target Start/End: Complemental strand, 27238571 - 27238462
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  || ||||||||||||||||||||||||||  ||| | | ||||| | |||    
T  27238571 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatagggtgcaaaatcgcacaattggcaaactataggagggaaaagtacaa 27238472  T
Q  138 ttaagcctaa 147  Q
    ||||||||||    
T  27238471 ttaagcctaa 27238462  T

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Target: chr3; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 146
Target Start/End: Original strand, 40848937 - 40849017
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagccta 146  Q
    ||||||||||| ||||||||  |||||||||||||||||||||||||||||  |||  || ||||| ||||||||||||||    
T  40848937 gcaaaatcgcttgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaagccta 40849017  T

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Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 43 - 145
Target Start/End: Original strand, 47871073 - 47871176
Alignment:
Q  43 cagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacat-ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaatta 140  Q
    ||||||||||||||||||| ||||||||||||||||    |||||  | ||||||||||||||||||||| ||||||||| |||| ||||| ||||||||    
T  47871073 cagaaaaggggaaaaagatggggtgcaaaatcgctcaaaaaaaaaagtgggggtgcaaaatcgcacaattagcaaaagat-agggggaaaagtgcaatta 47871171  T
Q  141 agcct 145  Q
    |||||    
T  47871172 agcct 47871176  T

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Target: chr3; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 26007259 - 26007181
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| ||||  || |||| | |||||||||||||||||    
T  26007259 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaactat-aggggggaaaatgcaattaagcct 26007181  T

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Target: chr3; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 26 - 144
Target Start/End: Complemental strand, 42673096 - 42672978
Alignment:
Q  26 catgggggcctccaaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagg 124  Q
    ||||||||||   |||||| ||| ||||||||  || ||| ||||||||| ||||||||||  |||||||||||||||||||||||||||||  || |||    
T  42673096 catgggggccataaaatcataaagggggaaaactatagggggcaaaatcgatcgtttaaaactatggggtgcaaaatcgcacaattggcaaactat-agg 42672998  T
Q  125 gtgaaaaatgcaattaagcc 144  Q
    | ||||| ||||||||||||    
T  42672997 gggaaaagtgcaattaagcc 42672978  T

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Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 10348775 - 10348825
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  10348775 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 10348825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 144
Target Start/End: Original strand, 24485436 - 24485513
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    |||||||||||| |||||||  |||||||||||||||||||||||||||||  || |||| ||||| ||||||||||||    
T  24485436 gcaaaatcgctcatttaaaactatggggtgcaaaatcgcacaattggcaaactat-agggagaaaagtgcaattaagcc 24485513  T

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Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 3644781 - 3644837
Alignment:
Q  88 atggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    |||||||||||||||||||||||  ||||| ||||||| ||||||||||||||||||    
T  3644781 atggggtgcaaaatcgcacaattaacaaaaaataagggggaaaaatgcaattaagcc 3644837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 146
Target Start/End: Original strand, 45060863 - 45060927
Alignment:
Q  82 aaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagccta 146  Q
    ||||| || ||||| |||||||||||||| |||||||||| ||||||||| ||||||||||||||    
T  45060863 aaaaagatagggtgtaaaatcgcacaattagcaaaagataggggtgaaaagtgcaattaagccta 45060927  T

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Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 1927878 - 1927812
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagat-gggtgcaaaatcgc 75  Q
    ||||||||||||||| |||||||||||| |||| ||| ||||||||||||||| ||||||||||||||    
T  1927878 acatcatcactaaaatacatgggggccttcaaaccag-aaaggggaaaaagatagggtgcaaaatcgc 1927812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 69 - 116
Target Start/End: Complemental strand, 24485096 - 24485049
Alignment:
Q  69 aaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||    
T  24485096 aaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaa 24485049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 3353527 - 3353577
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    ||||||||||||||||||||  ||| |||||||||||||||||||||||||    
T  3353527 gcaaaatcgctcgtttaaaactatgaggtgcaaaatcgcacaattggcaaa 3353577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 22429572 - 22429622
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  22429572 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaa 22429622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 112
Target Start/End: Original strand, 42456171 - 42456217
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattgg 112  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||    
T  42456171 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgg 42456217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 116
Target Start/End: Original strand, 53688251 - 53688329
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    |||||||||| ||||||||  || ||| |||||||||||||||| |||  |||| ||||||||||||||||||||||||    
T  53688251 aaatcagaaagggggaaaactatagggggcaaaatcgctcgttttaaactatggagtgcaaaatcgcacaattggcaaa 53688329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 53766241 - 53766191
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| ||||    
T  53766241 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattgacaaa 53766191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 147
Target Start/End: Original strand, 26007567 - 26007676
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||  ||||||||||| ||||||||||||  ||| |||  |||| |||||    
T  26007567 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaattatgaagtgcaaaatcgtacaattggcaaactatagggggaaaaagtgcaa 26007666  T
Q  138 ttaagcctaa 147  Q
    |||| |||||    
T  26007667 ttaaacctaa 26007676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 36180968 - 36181049
Alignment:
Q  68 aaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaata 149  Q
    ||||||||||||||||||  ||||||| |||||||||||||||  ||||  ||| ||  ||||| |||||||||||||||||    
T  36180968 aaaatcgctcgtttaaaactatggggtacaaaatcgcacaattaacaaactatagggaggaaaagtgcaattaagcctaata 36181049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 14015957 - 14016020
Alignment:
Q  83 aaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    |||| ||||||||||||||||||||||| ||||||||| ||| |||||| ||||||||| |||||    
T  14015957 aaaagatggggtgcaaaatcgcacaattagcaaaagat-aggatgaaaagtgcaattaaacctaa 14016020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 121
Target Start/End: Complemental strand, 28702410 - 28702300
Alignment:
Q  9 acatcatcactaaaacacatgggggcctccaaatcagaaaaggggaaaaagatgggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaa 108  Q
    |||||||||| |||| |||| ||||||| ||||||||||| |||||||    || |||||||||| |||  ||||||| |||| ||||||||||||| ||    
T  28702410 acatcatcaccaaaa-acataggggccttcaaatcagaaa-ggggaaaggattgtgtgcaaaatcactcaattaaaaatatggagtgcaaaatcgcataa 28702313  T
Q  109 ttggcaaaagata 121  Q
    ||| |||||||||    
T  28702312 ttgacaaaagata 28702300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 145
Target Start/End: Complemental strand, 20968800 - 20968717
Alignment:
Q  62 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||||||    ||||| | |||||||||||||||||||||  ||||||||| ||| ||||  |||||||||||||    
T  20968800 gggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagataggggggaaaggtgcaattaagcct 20968717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 147
Target Start/End: Complemental strand, 47665987 - 47665908
Alignment:
Q  68 aaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    |||||| ||||||| |||  ||| |||||||||||||||||||| ||||  |||||||  |||| |||||||||||||||    
T  47665987 aaaatcactcgttttaaacaatgaggtgcaaaatcgcacaattgacaaactataaggggaaaaagtgcaattaagcctaa 47665908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 1927834 - 1927772
Alignment:
Q  82 aaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||| || ||||||||||||||| ||||||||||||||| ||| ||||  ||||||||||||    
T  1927834 aaaaagatagggtgcaaaatcgcataattggcaaaagataggggggaaaggtgcaattaagcc 1927772  T

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Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 90 - 144
Target Start/End: Original strand, 10293909 - 10293963
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    |||||||||||||||||||||  ||||||||| ||| ||||| ||||||||||||    
T  10293909 ggggtgcaaaatcgcacaattaacaaaagataggggggaaaagtgcaattaagcc 10293963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 144
Target Start/End: Original strand, 18875163 - 18875245
Alignment:
Q  62 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||||||||||    ||||| | |||||||||||||| |||||| |||||||||| |||  |||| ||||||||||||    
T  18875163 gggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgtacaattagcaaaagatagggggcaaaagtgcaattaagcc 18875245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 21895720 - 21895654
Alignment:
Q  82 aaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaa-tgcaattaagcctaa 147  Q
    ||||| ||||||||||||||| |||||||||||||| |||  || |||||| |||||||||||||||    
T  21895720 aaaaagatggggtgcaaaatcacacaattggcaaaacatagtggggaaaaagtgcaattaagcctaa 21895654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 116
Target Start/End: Complemental strand, 36180660 - 36180582
Alignment:
Q  39 aaatcagaaaaggggaaaaagatgggtg-caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    |||||||||| ||||||||  || || | |||||||||||||||||||  ||||| |||||||||||||||||| ||||    
T  36180660 aaatcagaaagggggaaaactataggggtcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaa 36180582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 143
Target Start/End: Complemental strand, 10348556 - 10348480
Alignment:
Q  67 caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagc 143  Q
    |||||||||||||||||||  ||||| |||||||| | ||||||| ||||  ||| ||| ||||| |||||||||||    
T  10348556 caaaatcgctcgtttaaaattatgggatgcaaaattgaacaattgacaaactatacgggagaaaagtgcaattaagc 10348480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 144
Target Start/End: Original strand, 44008379 - 44008454
Alignment:
Q  68 aaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||| ||||||||||||  ||| |||||||||| ||||||||||||||  || ||| |||||| ||||||||||||    
T  44008379 aaaattgctcgtttaaaactatgaggtgcaaaattgcacaattggcaaactat-aggatgaaaagtgcaattaagcc 44008454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 146
Target Start/End: Original strand, 1101182 - 1101237
Alignment:
Q  91 gggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagccta 146  Q
    ||||| ||||||||||||   |||||||||||||| ||||| ||||||||||||||    
T  1101182 gggtgaaaaatcgcacaaaaagcaaaagataagggggaaaagtgcaattaagccta 1101237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 91 - 146
Target Start/End: Complemental strand, 18874935 - 18874880
Alignment:
Q  91 gggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagccta 146  Q
    |||||||||||||||||||| |||||||||| |||  |||| ||||||| ||||||    
T  18874935 gggtgcaaaatcgcacaattagcaaaagatagggggaaaaagtgcaattgagccta 18874880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 13657499 - 13657445
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    |||||||||||||||||||||||||||| |  |||| ||||| || |||||||||    
T  13657499 ggggtgcaaaatcgcacaattggcaaaaaaatagggagaaaagtgtaattaagcc 13657445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 144
Target Start/End: Complemental strand, 17372360 - 17372298
Alignment:
Q  82 aaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||| ||||||||||||||||||||| |||||| ||| |||  |||  ||||||||||||    
T  17372360 aaaaacagggggtgcaaaatcgcacaattagcaaaaaatagggggaaaaggtgcaattaagcc 17372298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 91 - 140
Target Start/End: Complemental strand, 4947312 - 4947263
Alignment:
Q  91 gggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaatta 140  Q
    ||||||||||||||||||||  ||||| ||| ||||||||| ||||||||    
T  4947312 gggtgcaaaatcgcacaattaacaaaaaataggggtgaaaagtgcaatta 4947263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 42455839 - 42455786
Alignment:
Q  95 gcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaat 148  Q
    ||||||||||||||||| ||||  ||| ||| ||||| ||||||||||||||||    
T  42455839 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcctaat 42455786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 151
Target Start/End: Complemental strand, 1100968 - 1100908
Alignment:
Q  91 gggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaataaa 151  Q
    ||||| |||||||||||||| |||||||||| ||  || || |||||||||| ||||||||    
T  1100968 gggtgaaaaatcgcacaatttgcaaaagatagggtggataagtgcaattaagtctaataaa 1100908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 8315083 - 8315138
Alignment:
Q  91 gggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcctaa 147  Q
    ||||||||||||||||||||| ||||| || |||| | ||| |||||||||||||||    
T  8315083 gggtgcaaaatcgcacaattgacaaaatat-aggggggaaagtgcaattaagcctaa 8315138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 141
Target Start/End: Original strand, 13657621 - 13657673
Alignment:
Q  90 ggggtgcaaaatcgcacaattggc-aaaagataagggtgaaaaatgcaattaa 141  Q
    |||||||||||||||||||||||| |||||||| |||  |||| |||||||||    
T  13657621 ggggtgcaaaatcgcacaattggcaaaaagataggggacaaaagtgcaattaa 13657673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 145
Target Start/End: Original strand, 17441066 - 17441118
Alignment:
Q  93 gtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||||||||  |||||||||  |  |||||||||||||||||||    
T  17441066 gtgcaaaatcgcacaattaacaaaagatagagaggaaaaatgcaattaagcct 17441118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 39 - 150
Target Start/End: Original strand, 45754 - 45866
Alignment:
Q  39 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | ||||||||||||||||||||||||||||||| |||| ||||| ||||    
T  45754 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagat-agggggaaaagtgca 45852  T
Q  137 attaagcctaataa 150  Q
    ||||||||||||||    
T  45853 attaagcctaataa 45866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 145
Target Start/End: Complemental strand, 45618 - 45536
Alignment:
Q  62 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||||||    ||||| | || ||||||||||||||||||  |||||||| |||| ||||| |||||||||||||    
T  45618 gggtgcaaaatcgctcaaaaaaaaagagggagtgcaaaatcgcacaattaacaaaagat-agggggaaaagtgcaattaagcct 45536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 436 - 329
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||||||||||||  || ||| ||||||||||||||||||||  ||||| |||||||||||||||||| ||||  ||| ||| ||||| |||||    
T  436 aaatcagaaaaggggaaaactatagggggcaaaatcgctcgtttaaaactatgggatgcaaaatcgcacaattgacaaactataggggggaaaagtgcaa 337  T
Q  138 ttaagcct 145  Q
    ||||||||    
T  336 ttaagcct 329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 116
Target Start/End: Original strand, 739 - 789
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  739 gcaaaatcgctcgtttaaaattatggggtgcaaaatcgcacaattggcaaa 789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 25316 - 25424
Alignment:
Q  39 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | ||||||||||||||||||||| |||||||||| ||| ||||| ||||    
T  25316 aaatcagaaatggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgca 25415  T
Q  137 attaagcct 145  Q
    |||||||||    
T  25416 attaagcct 25424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 1367 - 1474
Alignment:
Q  39 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | |||||||||||||||||||||||||||||||| |||  |||| ||||    
T  1367 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattggcaaaagatagggggaaaaagtgca 1466  T
Q  137 attaagcc 144  Q
    ||||||||    
T  1467 attaagcc 1474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 1200 - 1118
Alignment:
Q  62 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||||||||||    ||||| | |||||||||||||||||||||  ||||||||| |||  |||| ||||||||||||    
T  1200 gggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattaacaaaagatagggggaaaaagtgcaattaagcc 1118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 66 - 145
Target Start/End: Complemental strand, 19698 - 19620
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||  ||| ||| ||||| |||||||||||||    
T  19698 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatatggg-gaaaattgcaattaagcct 19620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 20031 - 20099
Alignment:
Q  78 gtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagccta 146  Q
    ||||||||  |||||| ||||||||||||||||| ||||  ||||||| ||||| ||||||||||||||    
T  20031 gtttaaaactatggggggcaaaatcgcacaattgacaaactataagggggaaaagtgcaattaagccta 20099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 144
Target Start/End: Original strand, 185250 - 185328
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||  ||| ||  ||||| ||||||||||||    
T  185250 gcaaaatcgctcgtttaaaactatggggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaagcc 185328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 143
Target Start/End: Complemental strand, 184945 - 184840
Alignment:
Q  39 aaatcagaaaaggggaaaaagatgggtg-caaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || |||| |||||||||||||||||||  |||||||||||||| ||||| ||| ||||  |||  || ||||| |||||    
T  184945 aaatcagaaagggggaaaactataggtggcaaaatcgctcgtttaaaactatggggtgcaaaattgcacagttgacaaactatagaggagaaaagtgcaa 184846  T
Q  138 ttaagc 143  Q
    ||||||    
T  184845 ttaagc 184840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 6644 - 6750
Alignment:
Q  39 aaatcagaaaagggg-aaaaagatggg-tgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||| |||| ||||||||||| |||||||||||||    ||||| | ||||||||||||||||||||| ||||||||| |||| ||||| ||||    
T  6644 aaatcagaaagggggcaaaaagatggggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagat-agggggaaaagtgca 6742  T
Q  137 attaagcc 144  Q
    ||||||||    
T  6743 attaagcc 6750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 6448 - 6393
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||||||||||| |||||||||| ||| ||||| |||||||||||||    
T  6448 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcct 6393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 39 - 145
Target Start/End: Original strand, 38643 - 38750
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaa 137  Q
    |||||||||| ||||||||  || ||| ||||||||| |||||||| |  |||||||||||||||||||||||||||||  ||| |||  |||| |||||    
T  38643 aaatcagaaagggggaaaactatagggggcaaaatcgttcgtttaagactatggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaa 38742  T
Q  138 ttaagcct 145  Q
    ||||||||    
T  38743 ttaagcct 38750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 111
Target Start/End: Complemental strand, 38329 - 38284
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattg 111  Q
    |||||||||||| |||||||  ||||| ||||||||||||||||||    
T  38329 gcaaaatcgctcatttaaaactatgggatgcaaaatcgcacaattg 38284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 439012 - 438930
Alignment:
Q  62 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||||||||||||    ||||| | ||||||||||||||||||||| |||||||||| ||| ||||| ||||||||||||    
T  439012 gggtgcaaaatcgctcaaaaaaaaagagggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 438930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 146
Target Start/End: Original strand, 439173 - 439255
Alignment:
Q  62 gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagccta 146  Q
    ||||||||||||||||    ||||| | ||| ||||||||||||||||| ||||||||||||||  |||| ||||||||||||||    
T  439173 gggtgcaaaatcgctcaa--aaaaagaggggatgcaaaatcgcacaattagcaaaagataaggggaaaaagtgcaattaagccta 439255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 145
Target Start/End: Original strand, 183626 - 183717
Alignment:
Q  54 aaaaagatgggtgcaaaatcgctcgtttaaa-aacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||||||||||||||   |||| || | |||||||||| |||||||||| |||||| ||| ||| ||||| |||||||||||||    
T  183626 aaaaagatgggtgcaaaatcgctcaaataaagaagagggggtgcaaa-tcgcacaattagcaaaatataggggggaaaagtgcaattaagcct 183717  T

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Target: scaffold0029 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 145
Target Start/End: Complemental strand, 10012 - 9904
Alignment:
Q  39 aaatcagaaaaggggaaaaagat-gggtgcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||| ||||||||  || ||| ||||||||||||||||||||  |||||| || ||||||||||||||||||||  ||| |||  |||| ||||    
T  10012 aaatcagaaagggggaaaactatagggggcaaaatcgctcgtttaaaactatgggggtgaaaaatcgcacaattggcaaactatagggggaaaaagtgca 9913  T
Q  137 attaagcct 145  Q
    |||||||||    
T  9912 attaagcct 9904  T

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Target: scaffold0009 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 205740 - 205686
Alignment:
Q  90 ggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    ||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||    
T  205740 ggggtgcaaaatcgcacaattagcaaaagat-agggagaaaaatgcaattaagcct 205686  T

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Target: scaffold0069 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 144
Target Start/End: Original strand, 50482 - 50560
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatgggg-tgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcc 144  Q
    ||||||| ||||||||||||  |||||| |||||||||||||||||||||||  || |||| ||||| ||||||||||||    
T  50482 gcaaaattgctcgtttaaaactatgggggtgcaaaatcgcacaattggcaaactat-agggggaaaagtgcaattaagcc 50560  T

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Target: scaffold0069; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 116
Target Start/End: Complemental strand, 50151 - 50101
Alignment:
Q  66 gcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaa 116  Q
    ||||||||||||||||||||  |||||||||||||| ||||||||| ||||    
T  50151 gcaaaatcgctcgtttaaaactatggggtgcaaaattgcacaattgacaaa 50101  T

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Target: scaffold0035 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 143
Target Start/End: Complemental strand, 73018 - 72967
Alignment:
Q  92 ggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagc 143  Q
    |||||||||| |||||||| ||||||||||| || |||||||||||||||||    
T  73018 ggtgcaaaattgcacaattagcaaaagataaaggggaaaaatgcaattaagc 72967  T

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Target: scaffold0535 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 145
Target Start/End: Complemental strand, 10062 - 10011
Alignment:
Q  94 tgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    |||||||||| ||||||||||||||||| |||  |||| |||||||||||||    
T  10062 tgcaaaatcgtacaattggcaaaagatagggggcaaaagtgcaattaagcct 10011  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 144
Target Start/End: Complemental strand, 412028 - 411923
Alignment:
Q  39 aaatcagaaaagggg-aaaaagat-gggtgcaaaatcgctcgtttaaaaacatggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgca 136  Q
    |||||||||| |||| |||||||| |||||||||||||||     ||||| | |||||||||||||||||||||| |||||||| |||| | ||| ||||    
T  412028 aaatcagaaagggggcaaaaagatagggtgcaaaatcgcttaaa-aaaaagagggggtgcaaaatcgcacaattgacaaaagat-agggggtaaagtgca 411931  T
Q  137 attaagcc 144  Q
    ||||||||    
T  411930 attaagcc 411923  T

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Target: scaffold1221 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 121
Target Start/End: Complemental strand, 1566 - 1533
Alignment:
Q  88 atggggtgcaaaatcgcacaattggcaaaagata 121  Q
    ||||||||||||||| ||||||||||||||||||    
T  1566 atggggtgcaaaatcacacaattggcaaaagata 1533  T

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Target: scaffold0376 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 7510 - 7454
Alignment:
Q  88 atggggtgcaaaatcgcacaattggcaaaagataagggtgaaaaatgcaattaagcct 145  Q
    |||||||||||||||||| |||| ||||||||| ||||  |||| |||||||||||||    
T  7510 atggggtgcaaaatcgcataattagcaaaagat-aggggaaaaagtgcaattaagcct 7454  T

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