View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3468_low_4 (Length: 551)

Name: NF3468_low_4
Description: NF3468
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3468_low_4
NF3468_low_4
[»] chr8 (30 HSPs)
chr8 (15-164)||(45084244-45084393)
chr8 (41-164)||(38098786-38098909)
chr8 (41-162)||(25487226-25487347)
chr8 (41-162)||(35393523-35393644)
chr8 (41-162)||(8352381-8352502)
chr8 (41-194)||(27719211-27719364)
chr8 (40-162)||(36781653-36781775)
chr8 (41-162)||(483159-483280)
chr8 (41-162)||(11020404-11020525)
chr8 (41-162)||(29997495-29997616)
chr8 (41-160)||(30655004-30655123)
chr8 (41-162)||(33411046-33411168)
chr8 (41-162)||(24757770-24757890)
chr8 (41-162)||(26416301-26416422)
chr8 (41-162)||(30700018-30700139)
chr8 (43-160)||(32834592-32834709)
chr8 (58-162)||(20818956-20819060)
chr8 (41-162)||(39780313-39780435)
chr8 (41-162)||(20187473-20187594)
chr8 (41-162)||(20206542-20206663)
chr8 (41-164)||(5458259-5458381)
chr8 (43-162)||(12986672-12986789)
chr8 (41-162)||(31097516-31097628)
chr8 (41-161)||(1104947-1105066)
chr8 (67-163)||(13174238-13174334)
chr8 (41-138)||(18574818-18574916)
chr8 (40-138)||(20524967-20525064)
chr8 (118-161)||(16584425-16584468)
chr8 (115-151)||(29225977-29226013)
chr8 (113-161)||(34918179-34918227)
[»] scaffold0189 (1 HSPs)
scaffold0189 (15-164)||(27790-27939)
[»] chr4 (41 HSPs)
chr4 (15-161)||(35949441-35949587)
chr4 (15-164)||(43957798-43957947)
chr4 (14-198)||(29933471-29933656)
chr4 (41-164)||(49332097-49332220)
chr4 (41-164)||(54202330-54202453)
chr4 (41-160)||(50621666-50621785)
chr4 (41-162)||(3875630-3875751)
chr4 (41-164)||(11005617-11005740)
chr4 (41-164)||(56162473-56162596)
chr4 (41-162)||(17445625-17445746)
chr4 (41-162)||(22169111-22169232)
chr4 (41-194)||(27767601-27767753)
chr4 (41-164)||(2491831-2491954)
chr4 (41-160)||(36308968-36309087)
chr4 (41-152)||(45884570-45884681)
chr4 (29-160)||(55541828-55541959)
chr4 (41-162)||(24744955-24745076)
chr4 (41-162)||(39677670-39677791)
chr4 (41-162)||(3874535-3874656)
chr4 (41-162)||(7327661-7327782)
chr4 (41-162)||(28867680-28867801)
chr4 (41-162)||(36225098-36225219)
chr4 (40-164)||(26488351-26488476)
chr4 (41-160)||(29923605-29923724)
chr4 (41-162)||(3931953-3932075)
chr4 (41-162)||(20492505-20492626)
chr4 (51-162)||(7554415-7554526)
chr4 (41-162)||(33961766-33961887)
chr4 (41-162)||(36432452-36432572)
chr4 (41-162)||(55282438-55282558)
chr4 (41-164)||(11308766-11308889)
chr4 (41-152)||(41764655-41764765)
chr4 (41-163)||(44878043-44878165)
chr4 (40-164)||(11381884-11382007)
chr4 (92-162)||(28573784-28573854)
chr4 (44-163)||(7326406-7326526)
chr4 (98-164)||(7795306-7795370)
chr4 (99-157)||(41476705-41476763)
chr4 (120-164)||(7818464-7818508)
chr4 (117-161)||(15506589-15506633)
chr4 (125-163)||(1536980-1537018)
[»] chr7 (29 HSPs)
chr7 (15-164)||(42697406-42697555)
chr7 (41-164)||(40431284-40431407)
chr7 (41-164)||(42076334-42076457)
chr7 (40-162)||(47455052-47455174)
chr7 (41-162)||(9741235-9741356)
chr7 (41-162)||(18676765-18676886)
chr7 (41-162)||(31587927-31588048)
chr7 (41-160)||(31621940-31622059)
chr7 (41-162)||(44508505-44508627)
chr7 (44-162)||(47020481-47020599)
chr7 (41-162)||(3887672-3887793)
chr7 (41-162)||(5544313-5544434)
chr7 (41-162)||(12726227-12726348)
chr7 (41-188)||(41118786-41118933)
chr7 (41-162)||(12848442-12848563)
chr7 (41-162)||(30888401-30888522)
chr7 (41-162)||(40186715-40186836)
chr7 (41-154)||(44061818-44061931)
chr7 (41-162)||(44291054-44291175)
chr7 (43-164)||(3112086-3112207)
chr7 (41-162)||(9870411-9870532)
chr7 (41-162)||(38743238-38743353)
chr7 (83-152)||(40190120-40190188)
chr7 (122-163)||(39494885-39494926)
chr7 (102-153)||(10242424-10242475)
chr7 (41-96)||(25105043-25105098)
chr7 (113-164)||(38168128-38168179)
chr7 (113-161)||(37544993-37545041)
chr7 (117-160)||(27419118-27419161)
[»] chr3 (52 HSPs)
chr3 (41-164)||(22497239-22497362)
chr3 (41-164)||(43218755-43218878)
chr3 (41-164)||(17338486-17338609)
chr3 (41-164)||(26717974-26718097)
chr3 (41-162)||(10471361-10471482)
chr3 (41-162)||(20607698-20607819)
chr3 (41-162)||(30357252-30357373)
chr3 (41-162)||(35846748-35846869)
chr3 (41-162)||(37126638-37126759)
chr3 (41-162)||(43973238-43973359)
chr3 (41-162)||(51754424-51754545)
chr3 (41-164)||(48458385-48458508)
chr3 (41-162)||(1546191-1546312)
chr3 (41-162)||(24348804-24348925)
chr3 (41-162)||(44377783-44377904)
chr3 (41-162)||(51167184-51167305)
chr3 (40-164)||(53018980-53019104)
chr3 (41-162)||(5273587-5273708)
chr3 (41-162)||(8828623-8828744)
chr3 (41-162)||(10659527-10659648)
chr3 (41-162)||(13286931-13287052)
chr3 (41-162)||(31655046-31655167)
chr3 (41-162)||(37821063-37821183)
chr3 (41-159)||(49804868-49804986)
chr3 (41-162)||(2445962-2446083)
chr3 (41-162)||(10049122-10049243)
chr3 (41-162)||(38252520-38252641)
chr3 (58-162)||(46528091-46528195)
chr3 (41-160)||(23150742-23150861)
chr3 (58-160)||(24405774-24405876)
chr3 (43-162)||(27449492-27449611)
chr3 (41-151)||(41114111-41114221)
chr3 (41-162)||(9745945-9746065)
chr3 (41-162)||(28555175-28555295)
chr3 (41-162)||(55274154-55274275)
chr3 (58-162)||(47697769-47697873)
chr3 (40-162)||(12227756-12227879)
chr3 (41-162)||(998325-998446)
chr3 (41-162)||(8068529-8068650)
chr3 (41-164)||(41454245-41454368)
chr3 (41-162)||(26229373-26229486)
chr3 (41-192)||(3019173-3019323)
chr3 (65-164)||(501738-501837)
chr3 (40-164)||(35513066-35513190)
chr3 (41-162)||(26975482-26975594)
chr3 (59-129)||(33591124-33591194)
chr3 (94-162)||(5218974-5219042)
chr3 (92-164)||(9126350-9126421)
chr3 (92-164)||(9134457-9134528)
chr3 (124-160)||(9116495-9116531)
chr3 (119-161)||(50507665-50507707)
chr3 (117-153)||(31608391-31608427)
[»] chr5 (23 HSPs)
chr5 (15-164)||(1420968-1421117)
chr5 (41-162)||(3390836-3390957)
chr5 (41-163)||(36484605-36484727)
chr5 (41-164)||(42221725-42221848)
chr5 (41-162)||(10691915-10692036)
chr5 (41-162)||(33591699-33591820)
chr5 (41-162)||(41743365-41743486)
chr5 (41-162)||(42675663-42675784)
chr5 (41-162)||(8836536-8836656)
chr5 (41-162)||(25031425-25031546)
chr5 (41-162)||(35066049-35066169)
chr5 (41-162)||(18185763-18185883)
chr5 (41-162)||(23191888-23192009)
chr5 (41-162)||(27771264-27771385)
chr5 (41-162)||(28349035-28349156)
chr5 (15-164)||(33570048-33570197)
chr5 (58-162)||(15472688-15472792)
chr5 (41-164)||(29296186-29296309)
chr5 (41-162)||(8335320-8335441)
chr5 (41-162)||(6230225-6230346)
chr5 (43-164)||(8782690-8782811)
chr5 (64-164)||(8935914-8936014)
chr5 (67-163)||(25472320-25472416)
[»] chr1 (51 HSPs)
chr1 (15-164)||(3416304-3416453)
chr1 (41-162)||(50490803-50490924)
chr1 (41-164)||(25828675-25828798)
chr1 (41-164)||(46674743-46674866)
chr1 (41-162)||(26770129-26770250)
chr1 (41-162)||(37094156-37094277)
chr1 (41-162)||(42885268-42885389)
chr1 (41-162)||(48542556-48542677)
chr1 (41-164)||(13556075-13556198)
chr1 (41-164)||(40359665-40359788)
chr1 (41-164)||(47533999-47534122)
chr1 (15-162)||(8895623-8895778)
chr1 (193-353)||(35104275-35104435)
chr1 (41-162)||(3770505-3770626)
chr1 (41-162)||(15475984-15476105)
chr1 (41-162)||(28226347-28226468)
chr1 (41-162)||(35719711-35719833)
chr1 (41-162)||(31760706-31760827)
chr1 (41-162)||(44054821-44054942)
chr1 (41-162)||(52469437-52469558)
chr1 (41-161)||(18604860-18604980)
chr1 (41-194)||(45502357-45502509)
chr1 (41-152)||(15907250-15907361)
chr1 (41-162)||(24180564-24180686)
chr1 (41-162)||(3994874-3994994)
chr1 (41-162)||(6978903-6979024)
chr1 (41-162)||(28068833-28068954)
chr1 (41-162)||(44234030-44234153)
chr1 (41-152)||(46234336-46234447)
chr1 (41-162)||(4490145-4490266)
chr1 (41-162)||(17580887-17581008)
chr1 (41-162)||(20599599-20599720)
chr1 (41-162)||(30159014-30159135)
chr1 (41-162)||(30361156-30361277)
chr1 (41-152)||(49456849-49456960)
chr1 (78-164)||(25729961-25730047)
chr1 (68-164)||(17926221-17926317)
chr1 (436-516)||(35096895-35096975)
chr1 (43-162)||(3046763-3046882)
chr1 (83-162)||(11335634-11335713)
chr1 (83-162)||(11493654-11493733)
chr1 (53-164)||(8969464-8969575)
chr1 (41-159)||(43106534-43106659)
chr1 (58-164)||(7042878-7042984)
chr1 (41-152)||(49740096-49740207)
chr1 (41-112)||(29033669-29033740)
chr1 (93-164)||(12320252-12320323)
chr1 (98-160)||(23545621-23545683)
chr1 (132-164)||(641456-641488)
chr1 (41-152)||(17136907-17137018)
chr1 (118-161)||(45926257-45926300)
[»] chr2 (27 HSPs)
chr2 (41-164)||(2380295-2380418)
chr2 (41-162)||(21866987-21867108)
chr2 (40-164)||(12242742-12242868)
chr2 (41-164)||(19390575-19390698)
chr2 (41-162)||(11124337-11124458)
chr2 (41-162)||(14287455-14287576)
chr2 (41-162)||(26479856-26479977)
chr2 (41-162)||(30787147-30787268)
chr2 (41-160)||(2357341-2357460)
chr2 (41-162)||(17977750-17977872)
chr2 (41-162)||(31547278-31547399)
chr2 (41-162)||(33965449-33965570)
chr2 (41-162)||(2372096-2372217)
chr2 (41-162)||(20115063-20115184)
chr2 (41-162)||(25336526-25336647)
chr2 (41-160)||(39430263-39430382)
chr2 (41-162)||(4049461-4049581)
chr2 (61-162)||(8113689-8113790)
chr2 (41-162)||(41568710-41568831)
chr2 (41-162)||(6034413-6034535)
chr2 (41-162)||(11978764-11978885)
chr2 (52-160)||(1222638-1222746)
chr2 (113-164)||(932074-932125)
chr2 (118-161)||(43652933-43652976)
chr2 (114-164)||(9141717-9141767)
chr2 (118-162)||(17435356-17435400)
chr2 (117-161)||(35006464-35006508)
[»] scaffold0562 (2 HSPs)
scaffold0562 (41-162)||(6449-6570)
scaffold0562 (41-162)||(5354-5475)
[»] chr6 (29 HSPs)
chr6 (41-162)||(4169666-4169787)
chr6 (41-162)||(4210395-4210516)
chr6 (43-164)||(5545371-5545492)
chr6 (41-162)||(17595873-17595994)
chr6 (41-160)||(33131142-33131261)
chr6 (41-163)||(8933814-8933936)
chr6 (41-162)||(33489794-33489915)
chr6 (41-162)||(8062791-8062912)
chr6 (41-162)||(10790493-10790614)
chr6 (41-161)||(742860-742980)
chr6 (41-164)||(32938410-32938533)
chr6 (41-162)||(8658989-8659113)
chr6 (15-162)||(28914103-28914255)
chr6 (41-162)||(18676712-18676833)
chr6 (43-162)||(34475145-34475264)
chr6 (45-164)||(12713099-12713218)
chr6 (41-162)||(29516667-29516788)
chr6 (40-164)||(9576029-9576153)
chr6 (41-164)||(11590246-11590369)
chr6 (44-164)||(2559730-2559849)
chr6 (41-152)||(9224609-9224720)
chr6 (41-163)||(8313766-8313888)
chr6 (67-164)||(20554819-20554916)
chr6 (41-101)||(29863937-29863997)
chr6 (117-164)||(25144160-25144207)
chr6 (115-159)||(13889147-13889191)
chr6 (113-164)||(24418698-24418748)
chr6 (113-161)||(3095288-3095336)
chr6 (118-154)||(26947090-26947126)
[»] scaffold0041 (1 HSPs)
scaffold0041 (41-188)||(105710-105857)
[»] scaffold1360 (1 HSPs)
scaffold1360 (41-162)||(948-1070)
[»] scaffold0057 (1 HSPs)
scaffold0057 (41-162)||(42686-42804)
[»] scaffold0548 (1 HSPs)
scaffold0548 (41-164)||(5256-5379)
[»] scaffold0081 (1 HSPs)
scaffold0081 (41-164)||(11110-11233)
[»] scaffold0025 (1 HSPs)
scaffold0025 (90-162)||(20394-20466)
[»] scaffold0237 (1 HSPs)
scaffold0237 (41-101)||(19634-19694)


Alignment Details
Target: chr8 (Bit Score: 134; Significance: 2e-69; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 45084393 - 45084244
Alignment:
Q  15 agatgtcgattcagatattggttgcatgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagag 114  Q
    |||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45084393 agatgttgattcagatattggttgcgtgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagag 45084294  T
Q  115 gacaattttggtattattgtaaaattttaaataaatttgggtgtaactag 164  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  45084293 ggcaattttggtattattgtaaaattttaaataaatttgggtgtaactag 45084244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 41 - 164
Target Start/End: Original strand, 38098786 - 38098909
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38098786 tgatttgtggatgaaagggggtaagggttcagaacgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 38098885  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||||||||||||    
T  38098886 ttaaataaatttgggtgtaactag 38098909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 25487226 - 25487347
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  25487226 tgatttgtggatgaaaggggataagggttcagaatgatcataaaagatggatttttagaaatttacatgaagaggacaattttggtattattgtaaaatt 25487325  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  25487326 ttaaataaatttgggtgtaact 25487347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 35393523 - 35393644
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35393523 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 35393622  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  35393623 ttaaataaatttgggtgtaact 35393644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 8352502 - 8352381
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8352502 tgatttgtggatgaaaggggggaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 8352403  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  8352402 ttaaataaatttgggtgtaact 8352381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 41 - 194
Target Start/End: Complemental strand, 27719364 - 27719211
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  27719364 tgatttgtggatgaaagagggtaagggttcagaatgatcataaaagatgggtttttagaaatttacatgaagagggcaattttggtattattgtaaaatt 27719265  T
Q  141 ttaaataaatttgggtgtaactagnnnnnnnggggtgtgactagcacccgtctt 194  Q
    |||||||||||||||||||||| |       ||||||||||||||||| |||||    
T  27719264 ttaaataaatttgggtgtaacttgtttttttggggtgtgactagcaccagtctt 27719211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 40 - 162
Target Start/End: Complemental strand, 36781775 - 36781653
Alignment:
Q  40 atgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaat 139  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||    
T  36781775 atgatttgtggatgaaagggggtaagggttcaaaatgatcataaaagatgagtttttaaaaatttacatgaagagggcaattttggtattattgtaaaat 36781676  T
Q  140 tttaaataaatttgggtgtaact 162  Q
    |||||||||||||||||||||||    
T  36781675 tttaaataaatttgggtgtaact 36781653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 483159 - 483280
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  483159 tgatttgtggatgaaagggggtaagggttcaaaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttagtattattgtaaaatt 483258  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||||| |||||||    
T  483259 ttaaataaatttggatgtaact 483280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 11020525 - 11020404
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  11020525 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttatatgaagagggcaattttggtattattgtaaaatt 11020426  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||| ||||||||||    
T  11020425 ttaaataaattcgggtgtaact 11020404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 29997616 - 29997495
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||    
T  29997616 tgatttgtggatgaaagggggtaagggttcagaataatcataaaagatgggtttttaaaaatttacatgaagaaggcaattttggtattattgtaaaatt 29997517  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  29997516 ttaaataaatttgggtgtaact 29997495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 41 - 160
Target Start/End: Complemental strand, 30655123 - 30655004
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||||||||||||||||| || | |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  30655123 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaaaataggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 30655024  T
Q  141 ttaaataaatttgggtgtaa 160  Q
    ||||||||||||||||||||    
T  30655023 ttaaataaatttgggtgtaa 30655004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 33411168 - 33411046
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaa-tttacatgaagaggacaattttggtattattgtaaaat 139  Q
    ||||||||||||||||  ||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||    
T  33411168 tgatttgtggatgaaagagggtaagggttcaaaatgatcataaaagatgggtttttaaaaaatttacatgaagagggcaattttggtattattgtaaaat 33411069  T
Q  140 tttaaataaatttgggtgtaact 162  Q
    |||||||||||||||||||||||    
T  33411068 tttaaataaatttgggtgtaact 33411046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 24757770 - 24757890
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24757770 tgatttgtggatgaaaaggggtaagagttcagaatgatcataaaa-atgggtttttaaaaatttacatgaagaggacaattttagtattattgtaaaatt 24757868  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||||| |||||||    
T  24757869 ttaaataaatttggatgtaact 24757890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 26416301 - 26416422
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||| |||||| |||||||||||||||    
T  26416301 tgatttgtggatgaaagggggtaagggttcagaataatcataaaagatgggtttttagaaatttacatgaagaggaccattttgatattattgtaaaatt 26416400  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||||| |||||||    
T  26416401 ttaaataaatttggatgtaact 26416422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 30700018 - 30700139
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||  |||||| |||||||| |||||||||||||||    
T  30700018 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgaatttttaaaaatttacacaaagagggcaattttgatattattgtaaaatt 30700117  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||| ||||||||    
T  30700118 ttaaataaatttgagtgtaact 30700139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 43 - 160
Target Start/End: Complemental strand, 32834709 - 32834592
Alignment:
Q  43 atttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatttt 142  Q
    |||||||||||||| ||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32834709 atttgtggatgaaaggggataagggttcagaataatcataaaaaatggatttttaaaaatttacatgaagatgacaattttggtattattgtaaaatttt 32834610  T
Q  143 aaataaatttgggtgtaa 160  Q
    |||||||||| |||||||    
T  32834609 aaataaatttaggtgtaa 32834592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 58 - 162
Target Start/End: Complemental strand, 20819060 - 20818956
Alignment:
Q  58 ggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtg 157  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20819060 ggggtaagggttcagaatgatcataaaagatgggtttttagaaatttacatgaagagggcaattttggtattattgtaaaattttaaataaatttgggtg 20818961  T
Q  158 taact 162  Q
    |||||    
T  20818960 taact 20818956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 39780435 - 39780313
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatgga-tttttaaaaatttacatgaagaggacaattttggtattattgtaaaat 139  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||| ||||||| ||||||    
T  39780435 tgatttgtggatgaaagggtgtaagggttcagaatgatcataaaagatggggtttttaaaaatttacatgaagagggcaattttgatattattataaaat 39780336  T
Q  140 tttaaataaatttgggtgtaact 162  Q
    |||||||||||||||||||||||    
T  39780335 tttaaataaatttgggtgtaact 39780313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 20187594 - 20187473
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||| ||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  20187594 tgatttgtagatgaaagggggtaagagttcataatgatcataaaagatgggtttttaaaaatttacatgaagatgacaattttgatattattgtaaaatt 20187495  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| |||||||||    
T  20187494 ttaaataaatttaggtgtaact 20187473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 20206663 - 20206542
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||| ||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  20206663 tgatttgtagatgaaagggggtaagagttcataatgatcataaaagatgggtttttaaaaatttacatgaagatgacaattttgatattattgtaaaatt 20206564  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| |||||||||    
T  20206563 ttaaataaatttaggtgtaact 20206542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 41 - 164
Target Start/End: Complemental strand, 5458381 - 5458259
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||| |   ||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  5458381 tgatttgtggatgaaagggggtgaaa-ttcagaatgatcataaaagatgggtttttagaaatttacatgaagagggcaattttggtattattgtaaaatt 5458283  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||||||||||||    
T  5458282 ttaaataaatttgggtgtaactag 5458259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 43 - 162
Target Start/End: Complemental strand, 12986789 - 12986672
Alignment:
Q  43 atttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatttt 142  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||  |||||||||||||||| ||||||| |||||||| |||||||||||||||||    
T  12986789 atttgtggatgaaatgg--taagggttcagaatgatcataaaagatgagtttttaaaaatttacacgaagagggcaattttgatattattgtaaaatttt 12986692  T
Q  143 aaataaatttgggtgtaact 162  Q
    |||||||||| |||||||||    
T  12986691 aaataaatttaggtgtaact 12986672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 31097628 - 31097516
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||         |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  31097628 tgatttgtggatgaaagggggtaagggttca---------taaaagatgggtttttaaaaatttacatgaagaagacaattttggtattattgtaaaatt 31097538  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  31097537 ttaaataaatttgggtgtaact 31097516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 1104947 - 1105066
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||| || ||||||||| |||||||||||||| ||||||  ||||||||||||||   ||||||||||||||||||||||||    
T  1104947 tgatttgtggatgaaa-ggggtgagagttcagaattatcataaaagatgggtttttagtaatttacatgaagaaagcaattttggtattattgtaaaatt 1105045  T
Q  141 ttaaataaatttgggtgtaac 161  Q
    |||||||||||| ||||||||    
T  1105046 ttaaataaatttaggtgtaac 1105066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 67 - 163
Target Start/End: Complemental strand, 13174334 - 13174238
Alignment:
Q  67 gttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaacta 163  Q
    ||||| ||||||||| ||| | || ||||||||||||||| ||||||||  ||||| ||||||||||||||||||||| |||||||| |||||||||    
T  13174334 gttcataatgatcatgaaaaaagggtttttaaaaatttacttgaagaggctaatttcggtattattgtaaaattttaagtaaatttgagtgtaacta 13174238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 41 - 138
Target Start/End: Complemental strand, 18574916 - 18574818
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatg-gatttttaaaaatttacatgaagaggacaattttggtattattgtaaaa 138  Q
    |||||||||||||||| ||||| |||||||| |||||| ||  |||| | | |||||| |||||||||||||||||  |||||||||||||||||||||    
T  18574916 tgatttgtggatgaaagggggtgagggttcaaaatgataatggaagaagagttttttacaaatttacatgaagagggtaattttggtattattgtaaaa 18574818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 40 - 138
Target Start/End: Complemental strand, 20525064 - 20524967
Alignment:
Q  40 atgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaa 138  Q
    ||||||| ||| ||||| ||| ||| |||||| | |||| || ||||| || |||| ||||||||||||||||| |||||||| |||||||||||||||    
T  20525064 atgatttttgggtgaaaagggataaaggttcaaagtgataatgaaagaagg-ttttaaaaaatttacatgaagaagacaatttcggtattattgtaaaa 20524967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 16584468 - 16584425
Alignment:
Q  118 aattttggtattattgtaaaattttaaataaatttgggtgtaac 161  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||    
T  16584468 aattttggtattattataaaattttaagtaaatttgggtgtaac 16584425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 115 - 151
Target Start/End: Original strand, 29225977 - 29226013
Alignment:
Q  115 gacaattttggtattattgtaaaattttaaataaatt 151  Q
    |||||||||| ||||||||||||||||||||||||||    
T  29225977 gacaattttgatattattgtaaaattttaaataaatt 29226013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 34918179 - 34918227
Alignment:
Q  113 aggacaattttggtattattgtaaaattttaaataaatttgggtgtaac 161  Q
    |||||||||||||||||||   ||||||||||  |||||||||||||||    
T  34918179 aggacaattttggtattataaaaaaattttaagaaaatttgggtgtaac 34918227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 130; Significance: 4e-67; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 27790 - 27939
Alignment:
Q  15 agatgtcgattcagatattggttgcatgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagag 114  Q
    |||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27790 agatgttgattcagatattggttgcgtgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagag 27889  T
Q  115 gacaattttggtattattgtaaaattttaaataaatttgggtgtaactag 164  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27890 ggcaattttggtattattgtaaaattttaaataaatttgggtgtaactag 27939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 127; Significance: 3e-65; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 15 - 161
Target Start/End: Original strand, 35949441 - 35949587
Alignment:
Q  15 agatgtcgattcagatattggttgcatgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagag 114  Q
    |||||| |||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35949441 agatgttgattcagatatttgttgcgtgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacataaagag 35949540  T
Q  115 gacaattttggtattattgtaaaattttaaataaatttgggtgtaac 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  35949541 gacaattttggtattattgtaaaattttaaataaatttgggtgtaac 35949587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 43957798 - 43957947
Alignment:
Q  15 agatgtcgattcagatattggttgcatgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagag 114  Q
    |||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||    
T  43957798 agatgttgattcagatattggttgcgtgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaattttacatgaaaag 43957897  T
Q  115 gacaattttggtattattgtaaaattttaaataaatttgggtgtaactag 164  Q
    | ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  43957898 ggcaattttggtattattgtaaaattttaaataaatttgggggtaactag 43957947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 29933471 - 29933656
Alignment:
Q  14 gagatgtcgattcagatattggttgcatgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaaga 113  Q
    ||||||| |||||||||||||||||| ||||||||||||||||  ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  29933471 gagatgttgattcagatattggttgcgtgatttgtggatgaaagagggtaagggttcagaataatcataaaagatgggtttttaaaaatttacatgaaga 29933570  T
Q  114 ggacaattttggtattattgtaaaattttaaataaatttgggtgtaactag-nnnnnnnggggtgtgactagcacccgtcttcatt 198  Q
    || |||||||||||||||||||||||||||||||||||| | |||||||||        ||||||||||||||||| |||||||||    
T  29933571 gggcaattttggtattattgtaaaattttaaataaatttagatgtaactagttttttttggggtgtgactagcaccggtcttcatt 29933656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 41 - 164
Target Start/End: Original strand, 49332097 - 49332220
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  49332097 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaaat 49332196  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||||||||||||    
T  49332197 ttaaataaatttgggtgtaactag 49332220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 41 - 164
Target Start/End: Complemental strand, 54202453 - 54202330
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  54202453 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 54202354  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||||||||||||    
T  54202353 ttaaataaatttgggtgtaactag 54202330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 41 - 160
Target Start/End: Complemental strand, 50621785 - 50621666
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  50621785 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 50621686  T
Q  141 ttaaataaatttgggtgtaa 160  Q
    ||||||||||||||||||||    
T  50621685 ttaaataaatttgggtgtaa 50621666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 3875630 - 3875751
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3875630 tgatttgtggatgaaatgggataagggttcagaatgatcataaaatatgggtttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 3875729  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  3875730 ttaaataaatttgggtgtaact 3875751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 41 - 164
Target Start/End: Original strand, 11005617 - 11005740
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||    
T  11005617 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgttaaatt 11005716  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||||||||||||    
T  11005717 ttaaataaatttgggtgtaactag 11005740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 41 - 164
Target Start/End: Complemental strand, 56162596 - 56162473
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  56162596 tgatttgtggatgaaagggggtaagggttcagaacgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 56162497  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||||||||||||    
T  56162496 ttaaataaatttgggtgtaactag 56162473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 17445625 - 17445746
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||    
T  17445625 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttagaaatttacatgaagaggataattttggtattattgtaaaatt 17445724  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  17445725 ttaaataaatttgggtgtaact 17445746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 22169232 - 22169111
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22169232 tgatttgtggatgaaaggggataagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 22169133  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||| ||||||||||    
T  22169132 ttaaataaattcgggtgtaact 22169111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 41 - 194
Target Start/End: Original strand, 27767601 - 27767753
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27767601 tgatttgtggatgaaa-ggggtaagggttcagaacgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 27767699  T
Q  141 ttaaataaatttgggtgtaactagnnnnnnnggggtgtgactagcacccgtctt 194  Q
    ||||||||||||||||||||||||       ||||||| ||||||||| |||||    
T  27767700 ttaaataaatttgggtgtaactagtttttttggggtgtaactagcaccagtctt 27767753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 41 - 164
Target Start/End: Complemental strand, 2491954 - 2491831
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||| |||||    
T  2491954 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttgatattattgttaaatt 2491855  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||||||||||||    
T  2491854 ttaaataaatttgggtgtaactag 2491831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 41 - 160
Target Start/End: Original strand, 36308968 - 36309087
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  36308968 tgatttgtggatgaaaaggagtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 36309067  T
Q  141 ttaaataaatttgggtgtaa 160  Q
    ||||||||||||||||||||    
T  36309068 ttaaataaatttgggtgtaa 36309087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 41 - 152
Target Start/End: Complemental strand, 45884681 - 45884570
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  45884681 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttgatattattgtaaaatt 45884582  T
Q  141 ttaaataaattt 152  Q
    ||||||||||||    
T  45884581 ttaaataaattt 45884570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 29 - 160
Target Start/End: Complemental strand, 55541959 - 55541828
Alignment:
Q  29 atattggttgcatgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtat 128  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||  ||||||||||||    
T  55541959 atattggttgcgtgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaattttacatgaagagagcaattttggtat 55541860  T
Q  129 tattgtaaaattttaaataaatttgggtgtaa 160  Q
    ||||||||||||||||||||||||| ||||||    
T  55541859 tattgtaaaattttaaataaatttgagtgtaa 55541828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 24744955 - 24745076
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  24744955 tgatttgtggatgaaagggggtaagggttcagaatgattataaaagatggatttttaaaaatttatatgaagagggcaattttggtattattgtaaaatt 24745054  T
Q  141 ttaaataaatttgggtgtaact 162  Q
     |||||||||||||||||||||    
T  24745055 gtaaataaatttgggtgtaact 24745076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 39677670 - 39677791
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  39677670 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggtaattttggtattattgtaaaatt 39677769  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| |||||||||    
T  39677770 ttaaataaatttaggtgtaact 39677791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 3874535 - 3874656
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||| ||||    
T  3874535 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttagaaatttacatgaagaggacaattttggtattatagtacaatt 3874634  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||||| |||||||    
T  3874635 ttaaataaatttggatgtaact 3874656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 7327661 - 7327782
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||| | ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7327661 tgatttgtggatgaaagggggtaaagattcagaatgatcataaaagatgagtttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 7327760  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||||| |||||||    
T  7327761 ttaaataaatttggatgtaact 7327782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 28867680 - 28867801
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  28867680 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgagtttttaaaaatttacatgaagagagcaattttggtattattgtaaaatt 28867779  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||  ||||||||    
T  28867780 ttaaataaatttaagtgtaact 28867801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 36225098 - 36225219
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| || ||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||    
T  36225098 tgatttgtggatgaaagggagtaagagttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttgatattattgtaaaatt 36225197  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||||| |||||||    
T  36225198 ttaaataaatttggatgtaact 36225219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 40 - 164
Target Start/End: Complemental strand, 26488476 - 26488351
Alignment:
Q  40 atgatttgtggatgaaatgggg--taagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaa 137  Q
    ||||||||||||||||| ||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||    
T  26488476 atgatttgtggatgaaagggggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgt-aa 26488378  T
Q  138 attttaaataaatttgggtgtaactag 164  Q
    |||| ||||||||||||||||||||||    
T  26488377 atttgaaataaatttgggtgtaactag 26488351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 41 - 160
Target Start/End: Complemental strand, 29923724 - 29923605
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| | |||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  29923724 tgatttgtggatgaaagggggtaagggttcaaaatgatcataaaagataggtttttaaaaatttacatgaagagggcaattttagtattattgtaaaatt 29923625  T
Q  141 ttaaataaatttgggtgtaa 160  Q
    |||||||||||| |||||||    
T  29923624 ttaaataaatttaggtgtaa 29923605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 3931953 - 3932075
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatg-gatttttaaaaatttacatgaagaggacaattttggtattattgtaaaat 139  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||| |||||||||||||||||||||||    
T  3931953 tgatttgtggataaaagggggtaagggttcagaatgatcataaaagatgaggtttttagaaatttacatgaagagggcaattttggtattattgtaaaat 3932052  T
Q  140 tttaaataaatttgggtgtaact 162  Q
    ||||||||||||| |||||||||    
T  3932053 tttaaataaattttggtgtaact 3932075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 20492626 - 20492505
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||| | || |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20492626 tgatttgtggatgaaagggggtaatgttttagaatgatcataaaagatgagtttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 20492527  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| | |||||||    
T  20492526 ttaaataaatttcgatgtaact 20492505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 51 - 162
Target Start/End: Original strand, 7554415 - 7554526
Alignment:
Q  51 atgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaat 150  Q
    |||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||    
T  7554415 atgaaagggggtaagggttcaaaatgatcataaaagatgggtttttaaaaatttacatgaagatggcaattttggtattattgtaaaatttgaaataaat 7554514  T
Q  151 ttgggtgtaact 162  Q
    ||||||||||||    
T  7554515 ttgggtgtaact 7554526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 33961766 - 33961887
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| || |||||||||||||||||||| ||||||||  |||||||||||||||||||||| | |||||||| |||||||||||||||    
T  33961766 tgatttgtggatgaaagggagtaagggttcagaatgatcagaaaagatgagtttttaaaaatttacatgaagatggcaattttgatattattgtaaaatt 33961865  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| |||||||||    
T  33961866 ttaaataaatttaggtgtaact 33961887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 36432452 - 36432572
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||   |||||||||||||    
T  36432452 tgatttgtggatgaaagggagtaagggttcagaatgatcataaaagatgg-tttttaaaaatttacatgaagagggcaattttgacgttattgtaaaatt 36432550  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| |||||||||    
T  36432551 ttaaataaatttaggtgtaact 36432572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 55282438 - 55282558
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| | |||||||||||||||||||||||||| |||| |||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  55282438 tgatttgtggatgaaa-gaggtaagggttcagaatgatcataaaatatgggtttttaaaaaattacatgaagagggcaattttggtattattgtaaaatt 55282536  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| | |||||||    
T  55282537 ttaaataaatttagatgtaact 55282558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 41 - 164
Target Start/End: Complemental strand, 11308889 - 11308766
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||| ||  ||||||||||||||||||||||| |||||| ||||||||||||| ||| |||||||||||| |||||||||||    
T  11308889 tgatttgtggatgaaagggggtgagaattcagaatgatcataaaagatgggtttttagaaatttacatgaacagggcaattttggtataattgtaaaatt 11308790  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    ||||||||||||| ||||||||||    
T  11308789 ttaaataaatttgagtgtaactag 11308766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 41 - 152
Target Start/End: Original strand, 41764655 - 41764765
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||| ||| | |||||| ||||||||||||||||||||||   |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  41764655 tgatttgtggataaaaggaggtaagagttcagaatgatcataaaagataagtttttaaaaatttacatgaaga-gacaattttgatattattgtaaaatt 41764753  T
Q  141 ttaaataaattt 152  Q
    ||||||||||||    
T  41764754 ttaaataaattt 41764765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 41 - 163
Target Start/End: Complemental strand, 44878165 - 44878043
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||| ||||||||| ||||| | ||||||||| ||||||||||||||  ||| || ||||||||||||||||||||||||| ||||||||||||| ||    
T  44878165 tgatttatggatgaaagggggtgaaggttcagaacgatcataaaagatgagtttctagaaatttacatgaagaggacaattttagtattattgtaaattt 44878066  T
Q  141 ttaaataaatttgggtgtaacta 163  Q
    |||||||||||||  ||||||||    
T  44878065 ttaaataaatttgaatgtaacta 44878043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 40 - 164
Target Start/End: Original strand, 11381884 - 11382007
Alignment:
Q  40 atgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaat 139  Q
    ||||||||||||||||| ||||| ||  || |||||||||||||||||||  |||||| |||||||| |||| ||  |||||||| ||||||||||||||    
T  11381884 atgatttgtggatgaaa-ggggtgagaatttagaatgatcataaaagatgagtttttagaaatttacttgaacagagcaattttgatattattgtaaaat 11381982  T
Q  140 tttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||| | |||||||    
T  11381983 tttaaataaatttggatataactag 11382007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 92 - 162
Target Start/End: Original strand, 28573784 - 28573854
Alignment:
Q  92 tttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaact 162  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||    
T  28573784 tttttaaaaatttacatgaagagggcaattttgatattactgtaaaattttaaataaatttgggtgtaact 28573854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 44 - 163
Target Start/End: Original strand, 7326406 - 7326526
Alignment:
Q  44 tttgtggatgaaatggggtaagggttcagaatgatcataaaagatgga-tttttaaaaatttacatgaagaggacaattttggtattattgtaaaatttt 142  Q
    ||||||| |||||  || ||| |||||| ||||||||| ||| ||||  |||||| || |||||||| ||||| ||||||  |||||||| |||||||||    
T  7326406 tttgtgggtgaaagaggttaaaggttcaaaatgatcatgaaaaatggggtttttagaattttacatggagagggcaatttcagtattattctaaaatttt 7326505  T
Q  143 aaataaatttgggtgtaacta 163  Q
    |||||||||||||||||||||    
T  7326506 aaataaatttgggtgtaacta 7326526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 7795306 - 7795370
Alignment:
Q  98 aaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaactag 164  Q
    |||||||| ||||| ||| || ||||||||||||| ||||||||| |||||||||||||||||||||    
T  7795306 aaaatttatatgaaaagg-cagttttggtattattataaaatttt-aataaatttgggtgtaactag 7795370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 41476705 - 41476763
Alignment:
Q  99 aaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtg 157  Q
    ||||||||||  ||||||||||||||| ||  |||||||||||||| ||||||||||||    
T  41476705 aaatttacatagagaggacaattttggcatcgttgtaaaattttaagtaaatttgggtg 41476763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 7818464 - 7818508
Alignment:
Q  120 ttttggtattattgtaaaattttaaataaatttgggtgtaactag 164  Q
    ||||||||||||| |||| |||||| |||||||||||||||||||    
T  7818464 ttttggtattattataaatttttaagtaaatttgggtgtaactag 7818508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 15506589 - 15506633
Alignment:
Q  117 caattttggtattattgtaaaattttaaataaatttgggtgtaac 161  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||||    
T  15506589 caatttttgtattattataaaattttaagtaaatttgggtgtaac 15506633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 163
Target Start/End: Original strand, 1536980 - 1537018
Alignment:
Q  125 gtattattgtaaaattttaaataaatttgggtgtaacta 163  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  1536980 gtattattgtaaaatttttagtaaatttgggtgtaacta 1537018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 126; Significance: 1e-64; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 42697555 - 42697406
Alignment:
Q  15 agatgtcgattcagatattggttgcatgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagag 114  Q
    |||||| |||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  42697555 agatgttgattcagatatttgttgcgtgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgaatttttaaaaatttacataaagag 42697456  T
Q  115 gacaattttggtattattgtaaaattttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42697455 gacaattttggtattattgtaaaattttaaataaatttgggtgtaactag 42697406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 41 - 164
Target Start/End: Original strand, 40431284 - 40431407
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  40431284 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaaat 40431383  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||||||||||||    
T  40431384 ttaaataaatttgggtgtaactag 40431407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 41 - 164
Target Start/End: Complemental strand, 42076457 - 42076334
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  42076457 tgatttgtggatgaaatggggtaacggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaaat 42076358  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||||||||||||    
T  42076357 ttaaataaatttgggtgtaactag 42076334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 40 - 162
Target Start/End: Complemental strand, 47455174 - 47455052
Alignment:
Q  40 atgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaat 139  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  47455174 atgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaat 47455075  T
Q  140 tttaaataaatttgggtgtaact 162  Q
    |||||||||||||||||||||||    
T  47455074 tttaaataaatttgggtgtaact 47455052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 9741235 - 9741356
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9741235 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 9741334  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  9741335 ttaaataaatttgggtgtaact 9741356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 18676765 - 18676886
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  18676765 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagatggcaattttggtattattgtaaaatt 18676864  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  18676865 ttaaataaatttgggtgtaact 18676886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 31587927 - 31588048
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31587927 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 31588026  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  31588027 ttaaataaatttgggtgtaact 31588048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 41 - 160
Target Start/End: Complemental strand, 31622059 - 31621940
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31622059 tgatttgtggatgaaagggagtaagggttcagaatgatcataaaagatgaatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 31621960  T
Q  141 ttaaataaatttgggtgtaa 160  Q
    |||||||||||||| |||||    
T  31621959 ttaaataaatttggatgtaa 31621940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 44508627 - 44508505
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaa-tttacatgaagaggacaattttggtattattgtaaaat 139  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||    
T  44508627 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaaatttacatgaagagggcaattttggtattattgtaaaat 44508528  T
Q  140 tttaaataaatttgggtgtaact 162  Q
    |||||||||||||||||||||||    
T  44508527 tttaaataaatttgggtgtaact 44508505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 44 - 162
Target Start/End: Original strand, 47020481 - 47020599
Alignment:
Q  44 tttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatttta 143  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  47020481 tttgtggatgaaagggggtaagggttcagaatgatcataaaagatgagtttttaaaaatttacatgaagaggacaattttgatattattgtaaaatttta 47020580  T
Q  144 aataaatttgggtgtaact 162  Q
    |||||||||||||||||||    
T  47020581 aataaatttgggtgtaact 47020599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 3887793 - 3887672
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||    
T  3887793 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttgatattattgtaaaatt 3887694  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||| ||||||||    
T  3887693 ttaaataaatttgagtgtaact 3887672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 5544313 - 5544434
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||  |||||||||||||||    
T  5544313 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttaatattattgtaaaatt 5544412  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  5544413 ttaaataaatttgggtgtaact 5544434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 12726227 - 12726348
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  12726227 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggtaattttggtattattgtaaaatt 12726326  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||| ||||||||||    
T  12726327 ttaaataaattcgggtgtaact 12726348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 41 - 188
Target Start/End: Original strand, 41118786 - 41118933
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  41118786 tgatttgtggatgaaagggggtaagggttcagaattatcataaaagatggatttttaaaaatttacatgaagaaggcaattttggtattattgttaaatt 41118885  T
Q  141 ttaaataaatttgggtgtaactagnnnnnnnggggtgtgactagcacc 188  Q
    |||||||||||| ||||||||| |       |||||||||||||||||    
T  41118886 ttaaataaatttaggtgtaacttgtttttttggggtgtgactagcacc 41118933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 12848563 - 12848442
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||  |||||||||||||||||||||||    
T  12848563 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttatatgaagagggtaattttggtattattgtaaaatt 12848464  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| |||||||||    
T  12848463 ttaaataaatttaggtgtaact 12848442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 30888401 - 30888522
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  30888401 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaatatgggtttttagaaatttacatgaagagggcaattttggtattattgtaaaatt 30888500  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||||| |||||||    
T  30888501 ttaaataaatttggatgtaact 30888522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 40186715 - 40186836
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||  |||||||||||||||||||||||| || ||||||||||||| |||||||    
T  40186715 tgatttgtggatgaaagggggtaagagttcagaatgatcataaaagatgagtttttaaaaatttacatgaagagggcacttttggtattattataaaatt 40186814  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||||| |||||||    
T  40186815 ttaaataaatttggatgtaact 40186836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 41 - 154
Target Start/End: Complemental strand, 44061931 - 44061818
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||  |||||||| |||||||||||||||    
T  44061931 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgagtttttaaaaatttacatgaagagagcaattttgatattattgtaaaatt 44061832  T
Q  141 ttaaataaatttgg 154  Q
    ||||||||||||||    
T  44061831 ttaaataaatttgg 44061818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 44291175 - 44291054
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||| ||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  44291175 tgatttgtagatgaaagggggtaagagttcataatgatcataaaagatgggtttttaaaaatttacatgaagatgacaattttgatattattgtaaaatt 44291076  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| |||||||||    
T  44291075 ttaaataaatttaggtgtaact 44291054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 43 - 164
Target Start/End: Original strand, 3112086 - 3112207
Alignment:
Q  43 atttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatttt 142  Q
    |||||||||||||| ||||| | |||||| |||||||||||||||| | ||||||  |||||||||||||| |  |||||||||||||||||||||||||    
T  3112086 atttgtggatgaaagggggtgaaggttcataatgatcataaaagataggtttttagtaatttacatgaagatggtaattttggtattattgtaaaatttt 3112185  T
Q  143 aaataaatttgggtgtaactag 164  Q
    ||||||||||||||||||||||    
T  3112186 aaataaatttgggtgtaactag 3112207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 9870411 - 9870532
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||| |||| |||||||||||| ||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||| ||    
T  9870411 tgatttgtggatgaaaggggataagtgttcagaatgataataaaagatgggtttttagaaatttacatgaagaggacaattttgttattattgtaaactt 9870510  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    || ||| ||||||| |||||||    
T  9870511 tttaattaatttggatgtaact 9870532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 38743238 - 38743353
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||      ||||| |||||||| |||||||||||||||    
T  38743238 tgatttgtggatgaaaggaggtaagggttcagaatgatcataaaagatggatttttaaaatttt------agagggcaattttgatattattgtaaaatt 38743331  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||| ||||||||    
T  38743332 ttaaataaatttgagtgtaact 38743353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 40190120 - 40190188
Alignment:
Q  83 aaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaattt 152  Q
    |||||||| |||||| ||||||| ||||||||| |||||||| ||||||||| |||||||||||||||||    
T  40190120 aaagatgggtttttagaaatttatatgaagagggcaattttgatattattgt-aaattttaaataaattt 40190188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 122 - 163
Target Start/End: Complemental strand, 39494926 - 39494885
Alignment:
Q  122 ttggtattattgtaaaattttaaataaatttgggtgtaacta 163  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  39494926 ttggtattattgtaaaattttaaataaatttaggtgtaacta 39494885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 102 - 153
Target Start/End: Original strand, 10242424 - 10242475
Alignment:
Q  102 tttacatgaagaggacaattttggtattattgtaaaattttaaataaatttg 153  Q
    |||||||||||| || ||||||||||||||||| ||||||||| ||||||||    
T  10242424 tttacatgaagatgataattttggtattattgtcaaattttaagtaaatttg 10242475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 25105098 - 25105043
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggattttt 96  Q
    |||||||||||||||| ||| ||| |||||||||| |||||||||||||| |||||    
T  25105098 tgatttgtggatgaaaggggataaaggttcagaataatcataaaagatgggttttt 25105043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 113 - 164
Target Start/End: Original strand, 38168128 - 38168179
Alignment:
Q  113 aggacaattttggtattattgtaaaattttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||||| |||||||||||||| ||| ||||| |||||||||    
T  38168128 aggacaattttggtatttttgtaaaattttaagtaattttggatgtaactag 38168179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 37544993 - 37545041
Alignment:
Q  113 aggacaattttggtattattgtaaaattttaaataaatttgggtgtaac 161  Q
    |||||||||||| ||||||||| ||||||||| |||| |||||||||||    
T  37544993 aggacaattttgatattattgttaaattttaagtaaaattgggtgtaac 37545041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 160
Target Start/End: Original strand, 27419118 - 27419161
Alignment:
Q  117 caattttggtattattgtaaaattttaaataaatttgggtgtaa 160  Q
    |||||||||||||||| ||||||||||| ||||||| |||||||    
T  27419118 caattttggtattattataaaattttaagtaaatttaggtgtaa 27419161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 116; Significance: 9e-59; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 41 - 164
Target Start/End: Complemental strand, 22497362 - 22497239
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  22497362 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaaat 22497263  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||||||||||||    
T  22497262 ttaaataaatttgggtgtaactag 22497239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 41 - 164
Target Start/End: Complemental strand, 43218878 - 43218755
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  43218878 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaaat 43218779  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||||||||||||    
T  43218778 ttaaataaatttgggtgtaactag 43218755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 41 - 164
Target Start/End: Original strand, 17338486 - 17338609
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  17338486 tgatttgtggatgaaagggagtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaaat 17338585  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||||||||||||    
T  17338586 ttaaataaatttgggtgtaactag 17338609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 41 - 164
Target Start/End: Original strand, 26717974 - 26718097
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  26717974 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagagggcaattttgatattattgtaaaatt 26718073  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||||||||||||    
T  26718074 ttaaataaatttgggtgtaactag 26718097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 10471361 - 10471482
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10471361 tgatttgtggatgaaagggggtaaaggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 10471460  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  10471461 ttaaataaatttgggtgtaact 10471482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 20607698 - 20607819
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  20607698 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttgatattattgtaaaatt 20607797  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  20607798 ttaaataaatttgggtgtaact 20607819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 30357373 - 30357252
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30357373 tgatttgtggatgaaagggggtaagggttcaaaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 30357274  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| |||||||||    
T  30357273 ttaaataaatttaggtgtaact 30357252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 35846869 - 35846748
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  35846869 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 35846770  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  35846769 ttaaataaatttgggtgtaact 35846748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 37126638 - 37126759
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  37126638 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 37126737  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  37126738 ttaaataaatttgggtgtaact 37126759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 43973238 - 43973359
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  43973238 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 43973337  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||||||| |||||    
T  43973338 ttaaataaatttgggtataact 43973359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 51754545 - 51754424
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  51754545 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 51754446  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  51754445 ttaaataaatttgggtgtaact 51754424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 41 - 164
Target Start/End: Complemental strand, 48458508 - 48458385
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  48458508 tgatttgtggatgaaagggggtaagggttcagaacgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 48458409  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||||||||||||    
T  48458408 ttaaataaatttgggtgtaactag 48458385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 1546191 - 1546312
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||    
T  1546191 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttgatattattgtaaaatt 1546290  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  1546291 ttaaataaatttgggtgtaact 1546312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 24348925 - 24348804
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||    
T  24348925 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagatggcaattttggtattattgtaaaatt 24348826  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  24348825 ttaaataaatttgggtgtaact 24348804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 44377904 - 44377783
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  44377904 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagagagcaattttggtattattgtaaaatt 44377805  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| |||||||||    
T  44377804 ttaaataaatttaggtgtaact 44377783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 51167184 - 51167305
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  51167184 tgatttgtggatgaaagggggtaagggttcataatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 51167283  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  51167284 ttaaataaatttgggtgtaact 51167305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 40 - 164
Target Start/End: Complemental strand, 53019104 - 53018980
Alignment:
Q  40 atgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaat 139  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||    
T  53019104 atgatttgtggatgaaagggggtaagggttcagaacgatcataaaagatgggtttttaaacatttacatgaagaggacaattttgatattattgtaaaat 53019005  T
Q  140 tttaaataaatttgggtgtaactag 164  Q
    |||||||||||||||||||||||||    
T  53019004 tttaaataaatttgggtgtaactag 53018980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 5273587 - 5273708
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||| |||||||||||||||||    
T  5273587 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgagtttttaaaaatttacatgaagagggcaatttcggtattattgtaaaatt 5273686  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  5273687 ttaaataaatttgggtgtaact 5273708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 8828623 - 8828744
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8828623 tgatttgtggatgaaagggggtaagagttcagaatgatcataaaagatgggtttttaaaaatttacatgacgaggacaattttggtattattgtaaaatt 8828722  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||||| |||||||    
T  8828723 ttaaataaatttggatgtaact 8828744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 10659648 - 10659527
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10659648 tgatttgtggatgaaagggggtaagggttcagaatgatcgtaaacgatggatttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 10659549  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||||||| |||||    
T  10659548 ttaaataaatttgggtttaact 10659527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 13287052 - 13286931
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  13287052 tgatttgtggatgaaagggggtaagggttcaaaattatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 13286953  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  13286952 ttaaataaatttgggtgtaact 13286931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 31655167 - 31655046
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||| |||||    
T  31655167 tgatttgtggatgaaatgaggtaagggttcagaatgatcataaaagatgggtttttagaaatttacatgaagagggcaattttggtattattgttaaatt 31655068  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  31655067 ttaaataaatttgggtgtaact 31655046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 37821183 - 37821063
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37821183 tgatttgtggatgaaa-gaggtacgggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattataaaatt 37821085  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  37821084 ttaaataaatttgggtgtaact 37821063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 41 - 159
Target Start/End: Original strand, 49804868 - 49804986
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  49804868 tgatttgtggatgaaagggggtaagggttcagaacgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttagtattattgtaaaatt 49804967  T
Q  141 ttaaataaatttgggtgta 159  Q
    |||||||||||||| ||||    
T  49804968 ttaaataaatttggatgta 49804986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 2446083 - 2445962
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||| |||||||| |||||||||||||||    
T  2446083 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaatatgggtttttaaaaattcacatgaagagggcaattttgatattattgtaaaatt 2445984  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| |||||||||    
T  2445983 ttaaataaatttaggtgtaact 2445962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 10049122 - 10049243
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    ||||||||||||||||  ||||||||||||| |||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10049122 tgatttgtggatgaaagagggtaagggttcataatgatcataaaagatgagtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 10049221  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  10049222 ttaaataaatttgggtgtaact 10049243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 38252641 - 38252520
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38252641 tgatttgtgaatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 38252542  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| | |||||||    
T  38252541 ttaaataaatttagatgtaact 38252520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 58 - 162
Target Start/End: Complemental strand, 46528195 - 46528091
Alignment:
Q  58 ggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtg 157  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  46528195 ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttaggtg 46528096  T
Q  158 taact 162  Q
    |||||    
T  46528095 taact 46528091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 41 - 160
Target Start/End: Complemental strand, 23150861 - 23150742
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  23150861 tgatttgtggatgaaaggggataagggtttagaatgatcataaaagatggatttttaaaaatttacatgaagagggcaattttggtattattataaaatt 23150762  T
Q  141 ttaaataaatttgggtgtaa 160  Q
    |||||||||| |||||||||    
T  23150761 ttaaataaatatgggtgtaa 23150742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 58 - 160
Target Start/End: Complemental strand, 24405876 - 24405774
Alignment:
Q  58 ggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtg 157  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  24405876 ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttggatg 24405777  T
Q  158 taa 160  Q
    |||    
T  24405776 taa 24405774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 43 - 162
Target Start/End: Complemental strand, 27449611 - 27449492
Alignment:
Q  43 atttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatttt 142  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  27449611 atttgtggatgaaaggggataagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggaaattttggtattattgtaaaatttt 27449512  T
Q  143 aaataaatttgggtgtaact 162  Q
    |||||||||| | |||||||    
T  27449511 aaataaatttagatgtaact 27449492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 41 - 151
Target Start/End: Original strand, 41114111 - 41114221
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  41114111 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagataaatttttaaaaatttacatgaagaggataattttgatattattgtaaaatt 41114210  T
Q  141 ttaaataaatt 151  Q
    |||||||||||    
T  41114211 ttaaataaatt 41114221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 9746065 - 9745945
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||| |    
T  9746065 tgatttgtggataaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttagtattattgtaaaa-t 9745967  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||| ||||||||||    
T  9745966 ttaaataaattcgggtgtaact 9745945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 28555175 - 28555295
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||   |||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  28555175 tgatttgtggatgaaa-gaggtaagggttcagaatgatcataaaagataagtttttagaaatttacatgaagaagacaattttggtattattgtaaaatt 28555273  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  28555274 ttaaataaatttgggtgtaact 28555295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 55274154 - 55274275
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||| ||||| |||||||||||||||||  |||||||||||||||||||||||| |||||||| |||||||||||||||    
T  55274154 tgatttgtggatgaaagggggtaagagttcataatgatcataaaagatgagtttttaaaaatttacatgaagagggcaattttgatattattgtaaaatt 55274253  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||||| |||||||    
T  55274254 ttaaataaatttggatgtaact 55274275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 58 - 162
Target Start/End: Complemental strand, 47697873 - 47697769
Alignment:
Q  58 ggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtg 157  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  47697873 ggggtaagggttcagattgatcataaaagatgggtttttaaaaatttacatgaagagagcaattttggtattattgtaaaattttaaataaatttgggtg 47697774  T
Q  158 taact 162  Q
    |||||    
T  47697773 taact 47697769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 40 - 162
Target Start/End: Original strand, 12227756 - 12227879
Alignment:
Q  40 atgatttgtggatgaaatgggg-taagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaa 138  Q
    ||||||||||||||||| |||| |||||||||||||| |||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||    
T  12227756 atgatttgtggatgaaaggggggtaagggttcagaataatcataaaagatgggtttttaaaaatttacgtgaagagggcaattttggtattattgtaaaa 12227855  T
Q  139 ttttaaataaatttgggtgtaact 162  Q
    ||||||||||||||  ||||||||    
T  12227856 ttttaaataaatttaagtgtaact 12227879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 998325 - 998446
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    ||||||||| |||||| |||||||||||||||||||||||||||| |||| |||||| ||||||||||||||| | ||||||| ||||||||||||||||    
T  998325 tgatttgtgaatgaaagggggtaagggttcagaatgatcataaaacatgggtttttagaaatttacatgaagatggcaattttagtattattgtaaaatt 998424  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||||| |||||||    
T  998425 ttaaataaatttggatgtaact 998446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 8068529 - 8068650
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||||||| ||||||||| |||  |||| | ||||||||||||||||| |||| |||||||||||||||||||    
T  8068529 tgatttgtggatgaaaaggggtaagggttcagaataatcataaaatatgagttttaagaaatttacatgaagagggcaatcttggtattattgtaaaatt 8068628  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  8068629 ttaaataaatttgggtgtaact 8068650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 41 - 164
Target Start/End: Complemental strand, 41454368 - 41454245
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||| ||||||||| ||||| | ||||||||||||||||||||||||| ||||||  |||||||||||| | ||||||||||||||||||||||||||    
T  41454368 tgatttttggatgaaagggggtgaaggttcagaatgatcataaaagatgggtttttagtaatttacatgaaaaagacaattttggtattattgtaaaatt 41454269  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    |||||||||||| |||||||||||    
T  41454268 ttaaataaatttaggtgtaactag 41454245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 26229486 - 26229373
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||        ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  26229486 tgatttgtggatgaaagggggtaagggtt--------tcataaaagatgggtttttaaacatttacatgaagaggacaattttggtattattgtaaaatt 26229395  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  26229394 ttaaataaatttgggtgtaact 26229373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 41 - 192
Target Start/End: Complemental strand, 3019323 - 3019173
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||| ||||||||||||||||| ||||||||||  |||||||||||||||||||||| |||||||||  |||||||||||||||    
T  3019323 tgatttgtggatgaaa-gggataagggttcagaatgattataaaagatgagtttttaaaaatttacatgaagatgacaattttaatattattgtaaaatt 3019225  T
Q  141 ttaaataaatttgggtgtaactagnnnnnnnggggtgtgactagcacccgtc 192  Q
    |||||||||||| | ||||||| |       ||||||| |||||||||||||    
T  3019224 ttaaataaatttagatgtaacttgtttttttggggtgtaactagcacccgtc 3019173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 65 - 164
Target Start/End: Complemental strand, 501837 - 501738
Alignment:
Q  65 gggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaactag 164  Q
    |||||||||||||||||||||||||  |||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  501837 gggttcagaatgatcataaaagatgagtttttagaaatttacatgaagagaacaattttgatattattgtaaaattttaaataaatttggatgtaactag 501738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 40 - 164
Target Start/End: Original strand, 35513066 - 35513190
Alignment:
Q  40 atgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaat 139  Q
    ||||||| ||||||||| ||||| | ||||||||||||| || ||||| || ||||||||||| |||||||||||| |||||||| ||||||||||||||    
T  35513066 atgatttttggatgaaagggggtgaaggttcagaatgataatgaaagaagggtttttaaaaatctacatgaagagggcaattttgatattattgtaaaat 35513165  T
Q  140 tttaaataaatttgggtgtaactag 164  Q
    ||||||||||||| | |||||||||    
T  35513166 tttaaataaatttagatgtaactag 35513190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 26975482 - 26975594
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||         ||||||||| |||||| ||||||||    
T  26975482 tgatttgtggatgaaaggggataagggttcagaatgatcataaaagatggatttttaaaaatttac---------acaattttgatattatagtaaaatt 26975572  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| |||||||||    
T  26975573 ttaaataaatttaggtgtaact 26975594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 59 - 129
Target Start/End: Complemental strand, 33591194 - 33591124
Alignment:
Q  59 gggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtatt 129  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  33591194 gggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtatt 33591124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 5219042 - 5218974
Alignment:
Q  94 tttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaact 162  Q
    |||| ||||||| ||| || || ||||||||||||||||||||||||||||||||||||||||||||||    
T  5219042 tttagaaatttagatggagggggcaattttggtattattgtaaaattttaaataaatttgggtgtaact 5218974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 9126350 - 9126421
Alignment:
Q  92 tttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaactag 164  Q
    |||| |||||||||||||||||||  ||||| ||||||||||||||||||||| ||||||| |||||||||||    
T  9126350 ttttaaaaaatttacatgaagaggt-aatttcggtattattgtaaaattttaagtaaatttaggtgtaactag 9126421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 92 - 164
Target Start/End: Original strand, 9134457 - 9134528
Alignment:
Q  92 tttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaactag 164  Q
    |||| |||||||||||||||||||  ||||| ||||||||||||||||||||| ||||||| |||||||||||    
T  9134457 ttttaaaaaatttacatgaagaggt-aatttcggtattattgtaaaattttaagtaaatttaggtgtaactag 9134528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 9116495 - 9116531
Alignment:
Q  124 ggtattattgtaaaattttaaataaatttgggtgtaa 160  Q
    ||||||||||||||||||||| |||||||||||||||    
T  9116495 ggtattattgtaaaattttaagtaaatttgggtgtaa 9116531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 119 - 161
Target Start/End: Complemental strand, 50507707 - 50507665
Alignment:
Q  119 attttggtattattgtaaaattttaaataaatttgggtgtaac 161  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||    
T  50507707 attttggtactattgtaaaatattaagtaaatttgggtgtaac 50507665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 31608391 - 31608427
Alignment:
Q  117 caattttggtattattgtaaaattttaaataaatttg 153  Q
    |||||||||||||||| ||||||||||| ||||||||    
T  31608391 caattttggtattattataaaattttaagtaaatttg 31608427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 114; Significance: 1e-57; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 1421117 - 1420968
Alignment:
Q  15 agatgtcgattcagatattggttgcatgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagag 114  Q
    |||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||    
T  1421117 agatgttgattcagatattggttgcgtgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaattttacatgaaaag 1421018  T
Q  115 gacaattttggtattattgtaaaattttaaataaatttgggtgtaactag 164  Q
    | ||||||||||||||||||||||||||||||||||||||  ||||||||    
T  1421017 ggcaattttggtattattgtaaaattttaaataaatttggaggtaactag 1420968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 3390836 - 3390957
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  3390836 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 3390935  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  3390936 ttaaataaatttgggtgtaact 3390957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 36484605 - 36484727
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |    
T  36484605 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaaaaggacaattttggtattattgtaaaaat 36484704  T
Q  141 ttaaataaatttgggtgtaacta 163  Q
    |||||||||||| ||||||||||    
T  36484705 ttaaataaatttaggtgtaacta 36484727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 41 - 164
Target Start/End: Complemental strand, 42221848 - 42221725
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  42221848 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagtgcaattttggtattattgtaaaatt 42221749  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    ||||||||||||| ||||||||||    
T  42221748 ttaaataaatttgagtgtaactag 42221725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 10691915 - 10692036
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||    
T  10691915 tgatttgtggatgaaatcgggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttgatattattgtaaaatt 10692014  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| |||||||||    
T  10692015 ttaaataaatttaggtgtaact 10692036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 33591699 - 33591820
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33591699 tgatttgtggatgaaagggggtaaggattcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 33591798  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| |||||||||    
T  33591799 ttaaataaatttaggtgtaact 33591820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 41743365 - 41743486
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41743365 tgatttgtggatgaaaggggataagggttcaaaatgatcataaaagatgaatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 41743464  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||||| |||||||    
T  41743465 ttaaataaatttggatgtaact 41743486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 42675663 - 42675784
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  42675663 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgaatttttaaaaatttacatgaagagggcaattttgatattattgtaaaatt 42675762  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| |||||||||    
T  42675763 ttaaataaatttaggtgtaact 42675784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 8836536 - 8836656
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8836536 tgatttgtggatgaag-ggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttgatattattgtaaaatt 8836634  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| |||||||||    
T  8836635 ttaaataaatttaggtgtaact 8836656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 25031546 - 25031425
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||  |||||||| |||||||||||||||    
T  25031546 tgatttgtggatgaaagggggtaaggattcagaatgatcataaaagatgggtttttaaaaatttacatgaagagtgcaattttgatattattgtaaaatt 25031447  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  25031446 ttaaataaatttgggtgtaact 25031425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 35066049 - 35066169
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  35066049 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaa-atgggtttttaaaaatttacatgaagagagcaattttggtattattgtaaaatt 35066147  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  35066148 ttaaataaatttgggtgtaact 35066169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 18185883 - 18185763
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18185883 tgatttgtggatgaaa-ggggtaagagttcaaaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 18185785  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| |||||||||    
T  18185784 ttaaataaatttaggtgtaact 18185763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 23191888 - 23192009
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||| |||||||| |||||||    
T  23191888 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttagaaatttacatgaagagggcaattttagtattattataaaatt 23191987  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||| ||||||||||||||||    
T  23191988 ttaaacaaatttgggtgtaact 23192009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 27771264 - 27771385
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||| |||||    
T  27771264 tgatttgtggatgaaatgaggtaagagttcagaatgatcataaaagatgggtttttagaaatttacatgaagatgacaattttggtattattgttaaatt 27771363  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||||| |||||||    
T  27771364 ttaaataaatttggatgtaact 27771385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 28349156 - 28349035
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||| |||||    
T  28349156 tgatttgtggatgaaatgaggtaagggttcagaatcatcataaaagatgggtttttagaaatttacatgaagatgacaattttggtattattgttaaatt 28349057  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| |||||||||    
T  28349056 ttaaataaatttaggtgtaact 28349035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 33570048 - 33570197
Alignment:
Q  15 agatgtcgattcagatattggttgcatgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagag 114  Q
    |||||| ||||||||| |||||||||  |||||||||| ||| ||||| ||  ||||||||||||||||||| ||| |||||| ||||||||||||| |     
T  33570048 agatgttgattcagatcttggttgcacaatttgtggataaaagggggtgagaattcagaatgatcataaaaggtgggtttttagaaatttacatgaacat 33570147  T
Q  115 gacaattttggtattattgtaaaattttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33570148 gacaattttggtattattgtaaaattttaaataaatttgggtgtaactag 33570197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 58 - 162
Target Start/End: Original strand, 15472688 - 15472792
Alignment:
Q  58 ggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtg 157  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15472688 ggggtaagggttcagattgatcataaaagatgggtttttaaaaatttacatgaagaagacaattttggtattattgtaaaattttaaataaatttgggtg 15472787  T
Q  158 taact 162  Q
    |||||    
T  15472788 taact 15472792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 41 - 164
Target Start/End: Complemental strand, 29296309 - 29296186
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    ||||||||||||||||  ||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  29296309 tgatttgtggatgaaagagggtaagagttcagaatgatcataaaagatgagtttttaaaaatttacatgaagaggacaattttgatattattgtaaaatt 29296210  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    |||||||||||| | |||||||||    
T  29296209 ttaaataaatttagatgtaactag 29296186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 8335441 - 8335320
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    ||||||||||||||||  ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||| |||||||||||||||    
T  8335441 tgatttgtggatgaaagagggaaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagagcaattttgatattattgtaaaatt 8335342  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||  ||||||||    
T  8335341 ttaaataaatttaagtgtaact 8335320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 6230346 - 6230225
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||| |||||||||||||||||||||||| |||  |||||||||||||||||||||||| |||||||  |||||||||||||||    
T  6230346 tgatttgtggatgaaaggggataagggttcagaatgatcataaaatatgagtttttaaaaatttacatgaagagggcaattttaatattattgtaaaatt 6230247  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||  ||||||||    
T  6230246 ttaaataaatttaagtgtaact 6230225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 43 - 164
Target Start/End: Original strand, 8782690 - 8782811
Alignment:
Q  43 atttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatttt 142  Q
    |||||||||||||| ||||| ||  |||||||||||||| |||||||| |||||| ||||||||||||| | ||||||||| ||||||||||||||||||    
T  8782690 atttgtggatgaaagggggtgagaattcagaatgatcatgaaagatgggtttttagaaatttacatgaacaagacaattttagtattattgtaaaatttt 8782789  T
Q  143 aaataaatttgggtgtaactag 164  Q
    ||||||||||||||||||||||    
T  8782790 aaataaatttgggtgtaactag 8782811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 64 - 164
Target Start/End: Original strand, 8935914 - 8936014
Alignment:
Q  64 agggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaacta 163  Q
    ||||||||||||||| || |||||  | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8935914 agggttcagaatgataatgaaagaatggtttttagaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaacta 8936013  T
Q  164 g 164  Q
    |    
T  8936014 g 8936014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 67 - 163
Target Start/End: Original strand, 25472320 - 25472416
Alignment:
Q  67 gttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaacta 163  Q
    ||||||||||||||| ||| |||| |||||| || |||| |||||||||    |||  |||||||| ||||||||||||||||||||||||||||||    
T  25472320 gttcagaatgatcatgaaaaatgggtttttagaattttaaatgaagagggtggtttcagtattattataaaattttaaataaatttgggtgtaacta 25472416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 114; Significance: 1e-57; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 3416453 - 3416304
Alignment:
Q  15 agatgtcgattcagatattggttgcatgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagag 114  Q
    |||||| |||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  3416453 agatgttgattcagatattggttgcgtgatttgtggatgaaagggggtaagggttcataatgatcataaaagatgggtttttaaaaatttacatgaagag 3416354  T
Q  115 gacaattttggtattattgtaaaattttaaataaatttgggtgtaactag 164  Q
    | | |||||||||||||||||||||||||||||||||||| | |||||||    
T  3416353 ggcgattttggtattattgtaaaattttaaataaatttggatataactag 3416304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 50490924 - 50490803
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  50490924 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 50490825  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  50490824 ttaaataaatttgggtgtaact 50490803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 41 - 164
Target Start/End: Complemental strand, 25828798 - 25828675
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25828798 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgagtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 25828699  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||||||||||||    
T  25828698 ttaaataaatttgggtgtaactag 25828675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 41 - 164
Target Start/End: Complemental strand, 46674866 - 46674743
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  46674866 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggattttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 46674767  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    |||||||||||| |||||||||||    
T  46674766 ttaaataaatttaggtgtaactag 46674743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 26770129 - 26770250
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  26770129 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttagaaatttacatgaagagggcaattttggtattattgtaaaatt 26770228  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  26770229 ttaaataaatttgggtgtaact 26770250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 37094156 - 37094277
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  37094156 tgatttgtggatgaaagggggtaagggttcagaatgatcgtaaaagaggggtttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 37094255  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  37094256 ttaaataaatttgggtgtaact 37094277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 42885389 - 42885268
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42885389 tgatttgtgtatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaatttttgtattattgtaaaatt 42885290  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  42885289 ttaaataaatttgggtgtaact 42885268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 48542556 - 48542677
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  48542556 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgtgtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 48542655  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  48542656 ttaaataaatttgggtgtaact 48542677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 41 - 164
Target Start/End: Complemental strand, 13556198 - 13556075
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  13556198 tgatttgtggacgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaattgacatgaagagggcaattttggtattattgtaaaatt 13556099  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||||||||||||    
T  13556098 ttaaataaatttgggtgtaactag 13556075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 41 - 164
Target Start/End: Complemental strand, 40359788 - 40359665
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| | ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  40359788 tgatttgtggatgaaaggaggtaagggttcagaacgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 40359689  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||||||||||||    
T  40359688 ttaaataaatttgggtgtaactag 40359665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 41 - 164
Target Start/End: Complemental strand, 47534122 - 47533999
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  47534122 tgatttgtggatgaaagggggtaagggttcagaacgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttgatattattgtaaaatt 47534023  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    ||||||||||||| ||||||||||    
T  47534022 ttaaataaatttgagtgtaactag 47533999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 15 - 162
Target Start/End: Complemental strand, 8895778 - 8895623
Alignment:
Q  15 agatgtcgattcagatattggttgca--------tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttac 106  Q
    |||||| |||||||||||||||||||        |||||||||||||||| |||||||| ||||| |||||||||||||||||| |||||||||||||||    
T  8895778 agatgttgattcagatattggttgcacatctatgtgatttgtggatgaaagggggtaagagttcataatgatcataaaagatgggtttttaaaaatttac 8895679  T
Q  107 atgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8895678 atgaagaggacaattttagtattattgtaaaattttaaataaatttgggtgtaact 8895623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 193 - 353
Target Start/End: Complemental strand, 35104435 - 35104275
Alignment:
Q  193 ttcatttatttgcttataaataaaataaaacatgttattttatttacttacgtagcattgtccttttttgtctattacgataattgtctttatttcctct 292  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||||||| ||||||||    
T  35104435 ttcatttatttgcttataaataaaataaaacatgttattttatttacatacgcagcattgtccttttttgtctattacaataattgtctttttttcctct 35104336  T
Q  293 nnnnnnnttgtcnnnnnnnatctcaccttccaaaactttatctaccctttaaacatttctt 353  Q
           |||||       ||||||||||||||||||||||||||||||||||||||||||    
T  35104335 aaaaaaattgtctttttttatctcaccttccaaaactttatctaccctttaaacatttctt 35104275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 3770626 - 3770505
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||    
T  3770626 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaaggcaattttggtattattgtaaaatt 3770527  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| |||||||||    
T  3770526 ttaaataaatttaggtgtaact 3770505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 15475984 - 15476105
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  15475984 tgatttgtggatgaaagggggtaagggttcagaatgataataaaagatgggtttttaaaaatttacatgaagagggcaatttttgtattattgtaaaatt 15476083  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  15476084 ttaaataaatttgggtgtaact 15476105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 28226347 - 28226468
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28226347 tgatttgtggatgaaagggggtaagggttcagaataatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 28226446  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| |||||||||    
T  28226447 ttaaataaatttaggtgtaact 28226468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 35719833 - 35719711
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatgga-tttttaaaaatttacatgaagaggacaattttggtattattgtaaaat 139  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||| ||||||    
T  35719833 tgatttgtggatgaaatggtgtaagggttcagaatgatcataaaagatggggtttttaaaaatttacatgaagagggcaattttggtattattataaaat 35719734  T
Q  140 tttaaataaatttgggtgtaact 162  Q
    |||||||||||||||||||||||    
T  35719733 tttaaataaatttgggtgtaact 35719711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 31760706 - 31760827
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||  |||||||||||||||    
T  31760706 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttagaaatttacatgaagaggacaatttttatattattgtaaaatt 31760805  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||| ||||||||    
T  31760806 ttaaataaatttgagtgtaact 31760827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 44054821 - 44054942
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  44054821 tgatttgtggatgaaaaggggtaagggttcaaaatgatcataaaagatgggtttttagaaatttacatgaagagggcaattttggtattattgtaaaatt 44054920  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| |||||||||    
T  44054921 ttaaataaatttaggtgtaact 44054942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 52469437 - 52469558
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    ||||||||||| |||| ||||||| |||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  52469437 tgatttgtggaagaaagggggtaatggttcataatgatcataaaagatgagtttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 52469536  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  52469537 ttaaataaatttgggtgtaact 52469558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 18604980 - 18604860
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||  |||||||||||||||| ||||||||||||||||||||||||    
T  18604980 tgatttgtggatgaaatggggtgagggttcagaatgatcataaaagatgggtttttagtaatttacatgaagagggcaattttggtattattgtaaaatt 18604881  T
Q  141 ttaaataaatttgggtgtaac 161  Q
    |||||||||||| ||||||||    
T  18604880 ttaaataaatttaggtgtaac 18604860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 41 - 194
Target Start/End: Original strand, 45502357 - 45502509
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||| |    
T  45502357 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattataaaa-t 45502455  T
Q  141 ttaaataaatttgggtgtaactagnnnnnnnggggtgtgactagcacccgtctt 194  Q
    |||| ||||||||||||||||| |       ||||||||||||||||| |||||    
T  45502456 ttaattaaatttgggtgtaacttgtttttttggggtgtgactagcaccagtctt 45502509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 41 - 152
Target Start/End: Complemental strand, 15907361 - 15907250
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15907361 tgatttgtggatgaaagggggtaagggttcaaaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 15907262  T
Q  141 ttaaataaattt 152  Q
    ||||||||||||    
T  15907261 ttaaataaattt 15907250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 24180564 - 24180686
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatgga-tttttaaaaatttacatgaagaggacaattttggtattattgtaaaat 139  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||| ||| |||||||||||||||| ||||||    
T  24180564 tgatttgtggatgaaatggtgtaagggttcagaatgatcataaaagatggggtttttaaaaatttacatgaaaagggcaattttggtattattataaaat 24180663  T
Q  140 tttaaataaatttgggtgtaact 162  Q
    |||||||||||||||||||||||    
T  24180664 tttaaataaatttgggtgtaact 24180686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 3994874 - 3994994
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||| |||||||| ||||| ||||||||||||||||||||    
T  3994874 tgatttgtggatgaaagggggtaagtgttcagaatgatcataaaagatgggtttttaaaaattttcatgaagatgacaa-tttggtattattgtaaaatt 3994972  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  3994973 ttaaataaatttgggtgtaact 3994994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 6979024 - 6978903
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||  |||||||||||||||||||||| | |||||||| |||||||||||||||    
T  6979024 tgatttgtggatgaaagggggtaagagttcagaatgatcataaaagatgagtttttaaaaatttacatgaagaaggcaattttgatattattgtaaaatt 6978925  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  6978924 ttaaataaatttgggtgtaact 6978903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 28068833 - 28068954
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  28068833 tgatttatggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaagtttggtattattgtaaaatt 28068932  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||  ||||||||    
T  28068933 ttaaataaatttatgtgtaact 28068954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 44234030 - 44234153
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttgg--tattattgtaaaa 138  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||  |||||||||||||    
T  44234030 tgatttgttgatgaaagggggtaagggttcagaatgatcataaaagatgggtttttagaaatttacatgaagagggcaattttggtatattattgtaaaa 44234129  T
Q  139 ttttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||||    
T  44234130 ttttaaataaatttgggtgtaact 44234153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 41 - 152
Target Start/End: Original strand, 46234336 - 46234447
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  46234336 tgatttgtgaatgaaagggggtaagggttcagaatgatcataaaagatgagtttttaaaaatttacatgaagaggacaattttagtattattgtaaaatt 46234435  T
Q  141 ttaaataaattt 152  Q
    ||||||||||||    
T  46234436 ttaaataaattt 46234447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 4490145 - 4490266
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||| |||||||||  | |||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||| |||||||||||||||    
T  4490145 tgatttatggatgaaagagagtaagggttcagaatgatcataaaagatgagtttttagaaatttacatgaagaggacaattttgatattattgtaaaatt 4490244  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  4490245 ttaaataaatttgggtgtaact 4490266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 17580887 - 17581008
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||| | |||||| ||| |||||||||||| |||||||||||||||||||||||||    
T  17580887 tgatttgtggatgaaagggggtaagagttcagaatgatcataaaagataggtttttagaaaattacatgaagagaacaattttggtattattgtaaaatt 17580986  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||||| |||||||    
T  17580987 ttaaataaatttggatgtaact 17581008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 20599599 - 20599720
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    ||||||||| |||||| |||||||||||||||||||||||||||| ||   ||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  20599599 tgatttgtgtatgaaagggggtaagggttcagaatgatcataaaatataagtttttaaaaatttacatgaagagaacaattttagtattattgtaaaatt 20599698  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  20599699 ttaaataaatttgggtgtaact 20599720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 30159135 - 30159014
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||| |||| |||||||||||||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  30159135 tgatttgtggatgaaaggggataagagttcagaatgatcataaaagatgagtttttaaaaatttacatgaagatgacaattttgatattattgtaaaatt 30159036  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| |||||||||    
T  30159035 ttaaataaatttaggtgtaact 30159014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 30361277 - 30361156
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||| |||||||||||||||    
T  30361277 tgatttgtggatgaaggggggtaagggttcagaatgatcataaaagatggatttttagaaatttacatgaagagagcaattttgatattattgtaaaatt 30361178  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||||  |||||||    
T  30361177 ttaaataaatttgaatgtaact 30361156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 41 - 152
Target Start/End: Complemental strand, 49456960 - 49456849
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    ||||||||||||||||   |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||    
T  49456960 tgatttgtggatgaaagatggtaagggttcagaatgatcataaaagatgaatttttaaaaatttacatgaagaggataattttagtattattgtaaaatt 49456861  T
Q  141 ttaaataaattt 152  Q
    ||||||||||||    
T  49456860 ttaaataaattt 49456849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 78 - 164
Target Start/End: Original strand, 25729961 - 25730047
Alignment:
Q  78 tcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaactag 164  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25729961 tcataaaagatgggtttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaactag 25730047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 68 - 164
Target Start/End: Original strand, 17926221 - 17926317
Alignment:
Q  68 ttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||||||||||| |||||| ||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17926221 ttcagaatgatcataaaagatgggtttttagaaatttacacgaacatgacaattttggtattattgtaaaattttaaataaatttgggtgtaactag 17926317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 436 - 516
Target Start/End: Complemental strand, 35096975 - 35096895
Alignment:
Q  436 tttttccttgaaggagataatttttgttgttttttgaacaagaagataacttttgttgttgataacttgatattcattata 516  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35096975 ttttttcttgaaggagataatttttgttgttttttgaacaagaagataacttttgttgttgataacttgatattcattata 35096895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 43 - 162
Target Start/End: Complemental strand, 3046882 - 3046763
Alignment:
Q  43 atttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatttt 142  Q
    |||||||||||||| |   ||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||  |||||||||||||||||    
T  3046882 atttgtggatgaaaggatataagggttcagaatgatcataaaagatgagtttttaaaaatttacatgaagagggcaattttaatattattgtaaaatttt 3046783  T
Q  143 aaataaatttgggtgtaact 162  Q
    |||||||||| | |||||||    
T  3046782 aaataaatttagatgtaact 3046763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 11335634 - 11335713
Alignment:
Q  83 aaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaact 162  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11335634 aaagatgggtttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaact 11335713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 11493654 - 11493733
Alignment:
Q  83 aaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaact 162  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11493654 aaagatgggtttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaact 11493733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 53 - 164
Target Start/End: Complemental strand, 8969575 - 8969464
Alignment:
Q  53 gaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaattt 152  Q
    |||| ||||| ||||||||||||||| || ||||| ||||||||| |||||||||||||||||  |||||| ||||||||||||||||||||||||||||    
T  8969575 gaaaaggggtgagggttcagaatgataatgaaagaaggatttttagaaatttacatgaagagggaaattttagtattattgtaaaattttaaataaattt 8969476  T
Q  153 gggtgtaactag 164  Q
    | || |||||||    
T  8969475 gagtataactag 8969464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 41 - 159
Target Start/End: Original strand, 43106534 - 43106659
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggattttta-------aaaatttacatgaagaggacaattttggtattattg 133  Q
    |||||| | ||||||| ||||||||||||||||||||||||||||||| | ||||||       ||||||||||||||||||||| ||||| ||||||||    
T  43106534 tgattttttgatgaaagggggtaagggttcagaatgatcataaaagataggtttttaaaatttaaaaatttacatgaagaggacacttttgatattattg 43106633  T
Q  134 taaaattttaaataaatttgggtgta 159  Q
    |||||||||||||||||||| |||||    
T  43106634 taaaattttaaataaatttgagtgta 43106659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 58 - 164
Target Start/End: Original strand, 7042878 - 7042984
Alignment:
Q  58 ggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtg 157  Q
    ||||| |||||||| |||||| || |||||  | |||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||    
T  7042878 ggggtgagggttcaaaatgataatgaaagaatggtttttagaaatttacatgaagagggcaattttggtattattgtaagattttaaataaatttaggtg 7042977  T
Q  158 taactag 164  Q
    |||||||    
T  7042978 taactag 7042984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 152
Target Start/End: Complemental strand, 49740207 - 49740096
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| | ||| |   ||||||||||| ||| ||||||| |||||| ||||||||||||| | |||||||||| |||||||||||||||    
T  49740207 tgatttgtggatgaaaggaggtgaaaattcagaatgattatataagatgggtttttagaaatttacatgaacatgacaattttgatattattgtaaaatt 49740108  T
Q  141 ttaaataaattt 152  Q
    ||||||||||||    
T  49740107 ttaaataaattt 49740096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 41 - 112
Target Start/End: Original strand, 29033669 - 29033740
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaag 112  Q
    |||||| ||||||||| |||||||||||||||||||||||||||| ||   |||||||||||||||||||||    
T  29033669 tgatttatggatgaaagggggtaagggttcagaatgatcataaaaaataagtttttaaaaatttacatgaag 29033740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 93 - 164
Target Start/End: Original strand, 12320252 - 12320323
Alignment:
Q  93 ttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||||  ||| |||||||||| ||||||||||||||||||| |||||||  ||||||||||    
T  12320252 ttttaaaaatttacattgagaagacaattttgatattattgtaaaattttaagtaaatttaagtgtaactag 12320323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 160
Target Start/End: Complemental strand, 23545683 - 23545621
Alignment:
Q  98 aaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaa 160  Q
    |||||||| ||| | |||| |||||| ||||||||||||||||||||  ||||||||||||||    
T  23545683 aaaatttatatgtaaaggataattttagtattattgtaaaattttaatgaaatttgggtgtaa 23545621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 164
Target Start/End: Complemental strand, 641488 - 641456
Alignment:
Q  132 tgtaaaattttaaataaatttgggtgtaactag 164  Q
    |||||||||||||||||||||||||||||||||    
T  641488 tgtaaaattttaaataaatttgggtgtaactag 641456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 152
Target Start/End: Complemental strand, 17137018 - 17136907
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||   || |||||| ||| ||||| |||   || |||||| || |||| ||| | | |||||||| ||||||||| |||||||    
T  17137018 tgatttgtggatgaaagggatcaaaggttcaaaattatcatgaaaagggggtttttagaattttatatggatacgacaatttcggtattattataaaatt 17136919  T
Q  141 ttaaataaattt 152  Q
    ||||||||||||    
T  17136918 ttaaataaattt 17136907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 45926257 - 45926300
Alignment:
Q  118 aattttggtattattgtaaaattttaaataaatttgggtgtaac 161  Q
    |||||||||||||||||||| |||||| ||||||| ||||||||    
T  45926257 aattttggtattattgtaaacttttaagtaaatttaggtgtaac 45926300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 2e-56; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 41 - 164
Target Start/End: Original strand, 2380295 - 2380418
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  2380295 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagattgatttttaaaaatttacatgaagaggacaattttggtattattgtaaaaat 2380394  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||||||||||||    
T  2380395 ttaaataaatttgggtgtaactag 2380418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 21866987 - 21867108
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21866987 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 21867086  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  21867087 ttaaataaatttgggtgtaact 21867108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 40 - 164
Target Start/End: Complemental strand, 12242868 - 12242742
Alignment:
Q  40 atgatttgtggatgaaatgggg--taagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaa 137  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12242868 atgatttgtggatgaaatggggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttggtattattgtaaa 12242769  T
Q  138 attttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||| |||||||||||    
T  12242768 attttaaataaatttaggtgtaactag 12242742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 41 - 164
Target Start/End: Original strand, 19390575 - 19390698
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  19390575 tgatttgtggatgaaaaggggtaagggttcagaacgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 19390674  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||||||||||||    
T  19390675 ttaaataaatttgggtgtaactag 19390698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 11124337 - 11124458
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11124337 tgatttgtggatgaaagggggtaagggttcaaaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 11124436  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  11124437 ttaaataaatttgggtgtaact 11124458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 14287455 - 14287576
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14287455 tgatttgtggatgaaagggggtaaaggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 14287554  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| |||||||||    
T  14287555 ttaaataaatttaggtgtaact 14287576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 26479856 - 26479977
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26479856 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagattggtttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 26479955  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||| ||||||||||    
T  26479956 ttaaataaattggggtgtaact 26479977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 30787147 - 30787268
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  30787147 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaatagggcaattttggtattattgtaaaatt 30787246  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  30787247 ttaaataaatttgggtgtaact 30787268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 41 - 160
Target Start/End: Complemental strand, 2357460 - 2357341
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2357460 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttagtattattgtaaaatt 2357361  T
Q  141 ttaaataaatttgggtgtaa 160  Q
    ||||||||||||| ||||||    
T  2357360 ttaaataaatttgagtgtaa 2357341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 17977750 - 17977872
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatgga-tttttaaaaatttacatgaagaggacaattttggtattattgtaaaat 139  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||    
T  17977750 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatggggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaat 17977849  T
Q  140 tttaaataaatttgggtgtaact 162  Q
    |||||||||||||||||||||||    
T  17977850 tttaaataaatttgggtgtaact 17977872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 31547278 - 31547399
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  31547278 tgatttgtggatgaaaggaggtaagggttcagaatgatcataaaagatgaatttttaaaaatttacatgaagatgacaattttggtattattgtaaaatt 31547377  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||||||| |||||    
T  31547378 ttaaataaatttgggtctaact 31547399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 33965449 - 33965570
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    ||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33965449 tgatttgtggatgaaagagggcaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttgatattattgtaaaatt 33965548  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  33965549 ttaaataaatttgggtgtaact 33965570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 2372096 - 2372217
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |    
T  2372096 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagagggcaattttagtattattgtaaaagt 2372195  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| | |||||||    
T  2372196 ttaaataaatttagatgtaact 2372217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 20115184 - 20115063
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||    
T  20115184 tgatttgtggatgaaagagggtaaaggttcagaatgatcataaaagatgggttttaaaaaatttacatgaagaggaaaattttggtattattgtaaaatt 20115085  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  20115084 ttaaataaatttgggtgtaact 20115063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 25336647 - 25336526
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||| |||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  25336647 tgatttgtggatgaaagggggtaaaggttcagaataatcataaaagatagatttttaaaaatttacatgaaaaggacaattttgatattattgtaaaatt 25336548  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  25336547 ttaaataaatttgggtgtaact 25336526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 41 - 160
Target Start/End: Original strand, 39430263 - 39430382
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||  |||||| |||||||||||||||| |||||||||||||||||||||||||    
T  39430263 tgatttgtggatgaaaaggggtaagggttcagaatgatcataaaatatgagtttttagaaatttacatgaagagaacaattttggtattattgtaaaatt 39430362  T
Q  141 ttaaataaatttgggtgtaa 160  Q
    ||||||||||||||||||||    
T  39430363 ttaaataaatttgggtgtaa 39430382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 4049581 - 4049461
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||| ||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||    
T  4049581 tgatttgtagatgaaagggggtaagggttcagaataatcataaaagatgg-tttttaaaaatttacatgaagaagacaattttgatattattgtaaaatt 4049483  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  4049482 ttaaataaatttgggtgtaact 4049461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 61 - 162
Target Start/End: Complemental strand, 8113790 - 8113689
Alignment:
Q  61 gtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaa 160  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8113790 gtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttggtattatagtaaaattttaaataaatttgggtgtaa 8113691  T
Q  161 ct 162  Q
    ||    
T  8113690 ct 8113689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 41568710 - 41568831
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||  |||||| |||||||||||||||||| |||||||||||||||||||||||    
T  41568710 tgatttgtggatgaaaaggggtaagggttcaaaatgatcataaaagatgagtttttagaaatttacatgaagaggataattttggtattattgtaaaatt 41568809  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| |||||||||    
T  41568810 ttaaataaatttaggtgtaact 41568831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 6034535 - 6034413
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatgga-tttttaaaaatttacatgaagaggacaattttggtattattgtaaaat 139  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||| |||||||| ||||||    
T  6034535 tgatttgtggatgaaagggtgtaagggttcagaatgatcataaaagatggggtttttaaaaatttacatgaagagggcaattttagtattattataaaat 6034436  T
Q  140 tttaaataaatttgggtgtaact 162  Q
    |||||||||||||||||||||||    
T  6034435 tttaaataaatttgggtgtaact 6034413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 11978885 - 11978764
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||| |||| ||||||||||||||||||| |||| ||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  11978885 tgatttgtggatgaaaggggataagagttcagaatgatcataaaaaatgggtttttaaaaatttacagaaagatgacaattttggtattattgtaaaatt 11978786  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| |||||||||    
T  11978785 ttaaataaatttaggtgtaact 11978764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 52 - 160
Target Start/End: Original strand, 1222638 - 1222746
Alignment:
Q  52 tgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatt 151  Q
    ||||| ||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||  ||||||| |||||||||||||||| ||||||||||    
T  1222638 tgaaaggggataagggttcagaatgatcataaaagatgagtttttaaaaatttacatgaagagagcaattttagtattattgtaaaattctaaataaatt 1222737  T
Q  152 tgggtgtaa 160  Q
    |||||||||    
T  1222738 tgggtgtaa 1222746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 932125 - 932074
Alignment:
Q  113 aggacaattttggtattattgtaaaattttaaataaatttgggtgtaactag 164  Q
    |||||||||||||||||||| |||||||| || ||||| |||||||||||||    
T  932125 aggacaattttggtattattataaaatttaaagtaaatatgggtgtaactag 932074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 43652976 - 43652933
Alignment:
Q  118 aattttggtattattgtaaaattttaaataaatttgggtgtaac 161  Q
    |||||| |||||||||||||||||||||||||||||||| ||||    
T  43652976 aattttagtattattgtaaaattttaaataaatttgggtataac 43652933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 9141767 - 9141717
Alignment:
Q  114 ggacaattttggtattattgtaaaattttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||||| || |||||||||| | |||||||||||||||||    
T  9141767 ggacaattttggtattaatgcaaaattttaagttaatttgggtgtaactag 9141717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 17435400 - 17435356
Alignment:
Q  118 aattttggtattattgtaaaattttaaataaatttgggtgtaact 162  Q
    ||||||| |||||||||||||||||||||||||||  ||||||||    
T  17435400 aattttgatattattgtaaaattttaaataaatttaagtgtaact 17435356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 35006464 - 35006508
Alignment:
Q  117 caattttggtattattgtaaaattttaaataaatttgggtgtaac 161  Q
    |||||||| |||||||||||| |||||| ||||||| ||||||||    
T  35006464 caattttgatattattgtaaacttttaagtaaatttaggtgtaac 35006508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562 (Bit Score: 110; Significance: 4e-55; HSPs: 2)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 6449 - 6570
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6449 tgatttgtggatgaaatgggataagggttcagaatgatcataaaatatgggtttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 6548  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  6549 ttaaataaatttgggtgtaact 6570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0562; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 5354 - 5475
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||| ||||    
T  5354 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttagaaatttacatgaagaggacaattttggtattatagtacaatt 5453  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||||| |||||||    
T  5454 ttaaataaatttggatgtaact 5475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 4e-55; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 4169787 - 4169666
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4169787 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 4169688  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  4169687 ttaaataaatttgggtgtaact 4169666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 4210516 - 4210395
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4210516 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 4210417  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  4210416 ttaaataaatttgggtgtaact 4210395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 43 - 164
Target Start/End: Complemental strand, 5545492 - 5545371
Alignment:
Q  43 atttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatttt 142  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  5545492 atttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatttt 5545393  T
Q  143 aaataaatttgggtgtaactag 164  Q
    ||||||||||||||||||||||    
T  5545392 aaataaatttgggtgtaactag 5545371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 17595873 - 17595994
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  17595873 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgggtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 17595972  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  17595973 ttaaataaatttgggtgtaact 17595994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 41 - 160
Target Start/End: Original strand, 33131142 - 33131261
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  33131142 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttagtattattgtaaaaat 33131241  T
Q  141 ttaaataaatttgggtgtaa 160  Q
    ||||||||||||||||||||    
T  33131242 ttaaataaatttgggtgtaa 33131261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 8933814 - 8933936
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8933814 tgatttgtggatgaaagggggtaagggttcagaacgatcataaaagatgggtttttaaaaatttacatgaagaggacaattttggtattatagtaaaatt 8933913  T
Q  141 ttaaataaatttgggtgtaacta 163  Q
    |||||||||||||||||||||||    
T  8933914 ttaaataaatttgggtgtaacta 8933936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 33489915 - 33489794
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33489915 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatgagtttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 33489816  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  33489815 ttaaataaatttgggtgtaact 33489794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 8062912 - 8062791
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||| |||||||    
T  8062912 tgatttgtggatgaaaaggggtaagggttcagaatgatcataaaagatgggtttttagaaaattacatgaagaggacaattttggtattattataaaatt 8062813  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||||||    
T  8062812 ttaaataaatttgggtgtaact 8062791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 10790614 - 10790493
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10790614 tgatttgtggatgaaagggtgtaagggttcagaatgatcataaaagatgaatttttaaaaatttacatgaagagggcaattttggtattattgtaaaatt 10790515  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| |||||||||    
T  10790514 ttaaataaattttggtgtaact 10790493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 742860 - 742980
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||    
T  742860 tgatttgtggatgaaagggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacacgaagagagcaattttggtattattgtaaaatt 742959  T
Q  141 ttaaataaatttgggtgtaac 161  Q
    ||||||||||||| |||||||    
T  742960 ttaaataaatttgagtgtaac 742980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 41 - 164
Target Start/End: Original strand, 32938410 - 32938533
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||| ||||||| ||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  32938410 tgatttgtcgatgaaaggggataagggttcagaatgatcataaaagatgggtttttagaaatttacatgaagagggcaattttggtattattgtaaaatt 32938509  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||||||||||||    
T  32938510 ttaaataaatttgggtgtaactag 32938533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 8659113 - 8658989
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataa---aagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaa 137  Q
    |||||||||||||||| |||||||||||||| |||||||||||   ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8659113 tgatttgtggatgaaagggggtaagggttcaaaatgatcataattaaagatgggtttttaaaaatttacatgaagaggacaattttggtattattgtaaa 8659014  T
Q  138 attttaaataaatttgggtgtaact 162  Q
    |||||||||||||||||||||||||    
T  8659013 attttaaataaatttgggtgtaact 8658989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 15 - 162
Target Start/End: Original strand, 28914103 - 28914255
Alignment:
Q  15 agatgtcgattcagatattggttgca-----tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatg 109  Q
    |||||| |||||||||||||||||||     |||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  28914103 agatgttgattcagatattggttgcacatcgtgatttgtggatgaaagggggtaagggttcagaatgatcataaaagattggtttttaaaaatttacatg 28914202  T
Q  110 aagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaact 162  Q
    |||||   ||||||| ||||||||||||||||||||||||||| |||||||||    
T  28914203 aagagagtaattttgatattattgtaaaattttaaataaatttaggtgtaact 28914255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 18676712 - 18676833
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgt-aaaat 139  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||    
T  18676712 tgatttgtggatgaaa-ggggtaagggttcagaatgatcataaaagatgaatttttaaaaatttacatgaagaggacaattttggtattattataaaaat 18676810  T
Q  140 tttaaataaatttgggtgtaact 162  Q
    ||||||||||||| |||||||||    
T  18676811 tttaaataaatttaggtgtaact 18676833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 43 - 162
Target Start/End: Complemental strand, 34475264 - 34475145
Alignment:
Q  43 atttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatttt 142  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||| |    
T  34475264 atttgtggatgaaagggggtaagggttcagaatgatcataaaagatgagtttttaaaaatttacatgaagagggcaattttggtattattgtaaaattgt 34475165  T
Q  143 aaataaatttgggtgtaact 162  Q
    |||||||||| | |||||||    
T  34475164 aaataaatttagatgtaact 34475145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 45 - 164
Target Start/End: Original strand, 12713099 - 12713218
Alignment:
Q  45 ttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaa 144  Q
    |||||||||||| ||||  |||||||||||||||||||||||||||  ||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  12713099 ttgtggatgaaaaggggcgagggttcagaatgatcataaaagatggggttttagaaatttacatgaagagggcaattttggtattattgtaaaattttaa 12713198  T
Q  145 ataaatttgggtgtaactag 164  Q
    |||||||||| |||||||||    
T  12713199 ataaatttggatgtaactag 12713218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 41 - 162
Target Start/End: Complemental strand, 29516788 - 29516667
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||| ||||||| | |||||| || || ||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  29516788 tgatttgtagatgaaaggaggtaagagtccaaaatgatcataaaagatgaatttttagaaatttacatgaagagggcaattttggtattattgtaaaatt 29516689  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    |||||||||||| | |||||||    
T  29516688 ttaaataaatttagatgtaact 29516667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 40 - 164
Target Start/End: Complemental strand, 9576153 - 9576029
Alignment:
Q  40 atgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaat 139  Q
    |||||||||||||||| |||||| ||||||||||||||| || ||||| || |||||| |||||||||||| |||  ||||||| |||||||||||||||    
T  9576153 atgatttgtggatgaagtggggtgagggttcagaatgataatgaaagaagggtttttagaaatttacatgatgagagcaattttagtattattgtaaaat 9576054  T
Q  140 tttaaataaatttgggtgtaactag 164  Q
    |||||||||||||| ||||||||||    
T  9576053 tttaaataaatttgtgtgtaactag 9576029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 41 - 164
Target Start/End: Complemental strand, 11590369 - 11590246
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||| |||| |||||||||  | ||||||||||||| || ||||| ||||||||| ||||||||||||||||   |||||||||||||||||||||||    
T  11590369 tgatttatggacgaaatggggcgatggttcagaatgataatgaaagaaggatttttagaaatttacatgaagagtgtaattttggtattattgtaaaatt 11590270  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    ||||||||||||||||||||||||    
T  11590269 ttaaataaatttgggtgtaactag 11590246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 44 - 164
Target Start/End: Complemental strand, 2559849 - 2559730
Alignment:
Q  44 tttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatttta 143  Q
    ||||||| ||||| ||||| |||||||| |||||| || ||||| | ||||||| ||||| ||||||||||| |||||||||||||||| ||||||||||    
T  2559849 tttgtgggtgaaaaggggtgagggttcaaaatgataatgaaagaag-atttttagaaattgacatgaagagggcaattttggtattattataaaatttta 2559751  T
Q  144 aataaatttgggtgtaactag 164  Q
    ||||||||| |||||||||||    
T  2559750 aataaattttggtgtaactag 2559730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 41 - 152
Target Start/End: Complemental strand, 9224720 - 9224609
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||| | ||||||| ||||| |||||||| |||||| || ||||| || |||| |||||||||||||||||||||||||||| |||| ||||||||||    
T  9224720 tgatttctagatgaaagggggtgagggttcaaaatgataatgaaagaagggttttaaaaaatttacatgaagaggacaattttgatattgttgtaaaatt 9224621  T
Q  141 ttaaataaattt 152  Q
    ||||||||||||    
T  9224620 ttaaataaattt 9224609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 41 - 163
Target Start/End: Original strand, 8313766 - 8313888
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||| | ||||||| ||||| ||||||| ||||||| || ||| |  | |||||| ||||||||||||||||||||||| || |||||||||||||||    
T  8313766 tgatttattgatgaaagggggtgagggttcggaatgataatgaaataaaggtttttacaaatttacatgaagaggacaattatgatattattgtaaaatt 8313865  T
Q  141 ttaaataaatttgggtgtaacta 163  Q
    ||| ||||||| | |||||||||    
T  8313866 ttatataaattcgagtgtaacta 8313888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 67 - 164
Target Start/End: Original strand, 20554819 - 20554916
Alignment:
Q  67 gttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaactag 164  Q
    |||||||||||| || ||||| |  |||||| |||||||||||||||||  |||||| ||||||||||| | |||||||||||||| | |||||||||    
T  20554819 gttcagaatgataatgaaagaagagtttttagaaatttacatgaagagggtaattttagtattattgtacagttttaaataaatttagatgtaactag 20554916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 29863937 - 29863997
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaa 101  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| |||| ||||||||||    
T  29863937 tgatttgtggatgaaagggggtaagggttcagaatgatcgtaaaaaatgggtttttaaaaa 29863997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 164
Target Start/End: Original strand, 25144160 - 25144207
Alignment:
Q  117 caattttggtattattgtaaaattttaaataaatttgggtgtaactag 164  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||    
T  25144160 caattttggtattattgtaaaattttaagtaaatttgagtgtaactag 25144207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 159
Target Start/End: Original strand, 13889147 - 13889191
Alignment:
Q  115 gacaattttggtattattgtaaaattttaaataaatttgggtgta 159  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||    
T  13889147 gacaattttggtattattgtaaaattttaagtaaatttaggtgta 13889191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 24418748 - 24418698
Alignment:
Q  113 aggacaattttggtattattgtaaaattttaaataaatttgggtgtaactag 164  Q
    |||| ||||||||||| ||| |||||||||||||||||| ||||||||||||    
T  24418748 aggataattttggtat-attctaaaattttaaataaattggggtgtaactag 24418698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 3095288 - 3095336
Alignment:
Q  113 aggacaattttggtattattgtaaaattttaaataaatttgggtgtaac 161  Q
    |||||||||||||||||||   ||||||||||  |||||||||||||||    
T  3095288 aggacaattttggtattataaaaaaattttaagaaaatttgggtgtaac 3095336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 26947126 - 26947090
Alignment:
Q  118 aattttggtattattgtaaaattttaaataaatttgg 154  Q
    |||||||||||||||||||| |||||| |||||||||    
T  26947126 aattttggtattattgtaaacttttaagtaaatttgg 26947090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 41 - 188
Target Start/End: Original strand, 105710 - 105857
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||    
T  105710 tgatttgtggatgaaagggggtaagggttcagaattatcataaaagatggatttttaaaaatttacatgaagaaggcaattttggtattattgttaaatt 105809  T
Q  141 ttaaataaatttgggtgtaactagnnnnnnnggggtgtgactagcacc 188  Q
    |||||||||||| ||||||||| |       |||||||||||||||||    
T  105810 ttaaataaatttaggtgtaacttgtttttttggggtgtgactagcacc 105857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1360 (Bit Score: 91; Significance: 8e-44; HSPs: 1)
Name: scaffold1360
Description:

Target: scaffold1360; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 948 - 1070
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatg-gatttttaaaaatttacatgaagaggacaattttggtattattgtaaaat 139  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||| | |||||| ||||||||||||||||| |||||||||||||||||||||||    
T  948 tgatttgtggataaaagggggtaagggttcagaatgatcataaaagatgaggtttttagaaatttacatgaagagggcaattttggtattattgtaaaat 1047  T
Q  140 tttaaataaatttgggtgtaact 162  Q
    ||||||||||||| |||||||||    
T  1048 tttaaataaattttggtgtaact 1070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 88; Significance: 5e-42; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 41 - 162
Target Start/End: Original strand, 42686 - 42804
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||| |||||||||   ||||||||||||    
T  42686 tgatttgtggatgaaatggggtaagggttcaaaatgatcataaaagatggagtttttaaaatttacatgaagagggcaattttgg---tattgtaaaatt 42782  T
Q  141 ttaaataaatttgggtgtaact 162  Q
    ||||||||||||| ||||||||    
T  42783 ttaaataaatttgagtgtaact 42804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0548 (Bit Score: 84; Significance: 1e-39; HSPs: 1)
Name: scaffold0548
Description:

Target: scaffold0548; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 41 - 164
Target Start/End: Complemental strand, 5379 - 5256
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||||||||||||| ||||| ||  ||||||||||||||||||||||| |||||| ||||||||||||| ||| |||||||||||| |||||||||||    
T  5379 tgatttgtggatgaaagggggtgagaattcagaatgatcataaaagatgggtttttagaaatttacatgaacagggcaattttggtataattgtaaaatt 5280  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    ||||||||||||| ||||||||||    
T  5279 ttaaataaatttgagtgtaactag 5256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 76; Significance: 7e-35; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 41 - 164
Target Start/End: Complemental strand, 11233 - 11110
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaatttacatgaagaggacaattttggtattattgtaaaatt 140  Q
    |||||| ||||||||| ||| | ||||||||||||||||||||||||||| ||||||  ||| |||||||||||| |||||||| |||||||||||||||    
T  11233 tgatttttggatgaaaggggatgagggttcagaatgatcataaaagatgggtttttagtaatatacatgaagagggcaattttgttattattgtaaaatt 11134  T
Q  141 ttaaataaatttgggtgtaactag 164  Q
    |||||||||||| | |||||||||    
T  11133 ttaaataaatttagatgtaactag 11110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 20394 - 20466
Alignment:
Q  90 gatttttaaaaatttacatgaagaggacaattttggtattattgtaaaattttaaataaatttgggtgtaact 162  Q
    ||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  20394 gatttttaaaaatttacattaagagggcaattttgatattattgtaaaattttaaataaatttgggtgtaact 20466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 101
Target Start/End: Original strand, 19634 - 19694
Alignment:
Q  41 tgatttgtggatgaaatggggtaagggttcagaatgatcataaaagatggatttttaaaaa 101  Q
    |||||||||||||||| |||||||||||||||||||||| ||||| |||| ||||||||||    
T  19634 tgatttgtggatgaaagggggtaagggttcagaatgatcgtaaaaaatgggtttttaaaaa 19694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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