View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3470_high_54 (Length: 266)
Name: NF3470_high_54
Description: NF3470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3470_high_54 |
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Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 19 - 255
Target Start/End: Original strand, 42044631 - 42044867
Alignment:
| Q |
19 |
tcaagtccaatcaagatcacagaattgagaaagctctcgaacagtgaggtaattaccgtttcaaactttcttagcaatcccgtttccacttcgtgccctc |
118 |
Q |
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| T |
42044631 |
tcaagtccaatcaagatcacagaattgagaaagctctcgaacagtgaggtaattaccgtttcaaactttcttagcaatcccgtttccacttcgtgccctc |
42044730 |
T |
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| Q |
119 |
tttgaatctggaggttgtggctcaccagaaattctcccggacccatcaaatacatgaacaatatttgcagtttcattgaaaccttctccagagactgcca |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42044731 |
tttgaatctggaggttgtggctcaccagaaattctcccggacccatcaaatacatgaacaatatttgcagtttcattgaaaccttctccagagactgcca |
42044830 |
T |
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| Q |
219 |
ccgcaaaattccgaaaatactcaccactttgcttctt |
255 |
Q |
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| T |
42044831 |
ccgcaaaattccgaaaatactcaccactttgcttctt |
42044867 |
T |
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