View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3470_high_59 (Length: 252)

Name: NF3470_high_59
Description: NF3470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3470_high_59
NF3470_high_59
[»] chr6 (62 HSPs)
chr6 (3-238)||(15698991-15699226)
chr6 (3-238)||(22166094-22166329)
chr6 (3-238)||(22243248-22243483)
chr6 (3-237)||(22062051-22062285)
chr6 (3-238)||(20016773-20017008)
chr6 (3-238)||(22767661-22767895)
chr6 (3-238)||(24855790-24856024)
chr6 (3-238)||(15850525-15850761)
chr6 (3-238)||(20169678-20169912)
chr6 (5-239)||(18185029-18185262)
chr6 (3-239)||(18447650-18447885)
chr6 (25-239)||(18011322-18011537)
chr6 (3-232)||(18853449-18853677)
chr6 (3-233)||(29595138-29595356)
chr6 (19-239)||(25625217-25625427)
chr6 (179-239)||(15699255-15699315)
chr6 (179-239)||(22061959-22062019)
chr6 (179-239)||(22166005-22166065)
chr6 (179-239)||(22243512-22243572)
chr6 (181-239)||(18011563-18011621)
chr6 (179-239)||(15850436-15850496)
chr6 (179-239)||(30672281-30672341)
chr6 (184-239)||(29595391-29595446)
chr6 (182-236)||(15699329-15699383)
chr6 (181-231)||(18184953-18185003)
chr6 (179-233)||(18447909-18447963)
chr6 (181-239)||(18853710-18853768)
chr6 (182-236)||(19585947-19586001)
chr6 (182-236)||(22243586-22243640)
chr6 (182-236)||(25962514-25962568)
chr6 (182-236)||(25962994-25963048)
chr6 (182-236)||(25967161-25967215)
chr6 (182-236)||(25967641-25967695)
chr6 (179-239)||(19586015-19586075)
chr6 (179-239)||(19586099-19586159)
chr6 (181-233)||(21560957-21561009)
chr6 (182-233)||(18853782-18853833)
chr6 (184-239)||(22767573-22767628)
chr6 (182-233)||(29595460-29595511)
chr6 (184-234)||(20169945-20169995)
chr6 (182-236)||(22061891-22061945)
chr6 (182-236)||(22165937-22165991)
chr6 (182-231)||(18011635-18011684)
chr6 (179-239)||(20016684-20016744)
chr6 (180-232)||(20170012-20170064)
chr6 (180-232)||(22767509-22767561)
chr6 (184-239)||(24855702-24855757)
chr6 (182-232)||(20016620-20016670)
chr6 (182-232)||(24855638-24855688)
chr6 (19-99)||(25632033-25632113)
chr6 (181-232)||(25962442-25962493)
chr6 (181-232)||(25967089-25967140)
chr6 (182-236)||(15850368-15850422)
chr6 (182-236)||(30672213-30672267)
chr6 (181-232)||(25962922-25962973)
chr6 (181-232)||(25967569-25967620)
chr6 (3-62)||(30672449-30672507)
chr6 (201-239)||(20108245-20108283)
chr6 (181-233)||(25625453-25625506)
chr6 (3-62)||(19586267-19586325)
chr6 (3-62)||(25962276-25962334)
chr6 (3-62)||(25966923-25966981)
[»] chr5 (47 HSPs)
chr5 (3-238)||(20596374-20596609)
chr5 (3-238)||(20602660-20602895)
chr5 (3-238)||(20608951-20609186)
chr5 (3-238)||(23711222-23711457)
chr5 (3-238)||(24939963-24940198)
chr5 (3-238)||(15734969-15735204)
chr5 (3-238)||(24953719-24953953)
chr5 (3-238)||(20621597-20621832)
chr5 (3-238)||(23747485-23747720)
chr5 (3-238)||(20791259-20791496)
chr5 (3-238)||(18072335-18072569)
chr5 (3-233)||(23601194-23601423)
chr5 (3-238)||(24219267-24219501)
chr5 (3-233)||(21281468-21281698)
chr5 (179-239)||(24940228-24940288)
chr5 (179-239)||(15735233-15735293)
chr5 (179-239)||(21281378-21281438)
chr5 (179-239)||(20596286-20596346)
chr5 (179-239)||(20602572-20602632)
chr5 (179-239)||(20608863-20608923)
chr5 (179-239)||(23601104-23601164)
chr5 (179-239)||(23711133-23711193)
chr5 (182-236)||(24940302-24940356)
chr5 (179-239)||(20621861-20621921)
chr5 (179-239)||(23747750-23747810)
chr5 (184-239)||(20791171-20791226)
chr5 (184-239)||(24953631-24953686)
chr5 (182-236)||(15735307-15735361)
chr5 (182-236)||(20596218-20596272)
chr5 (182-236)||(20602504-20602558)
chr5 (182-236)||(20608795-20608849)
chr5 (182-236)||(23711065-23711119)
chr5 (184-239)||(18072603-18072658)
chr5 (182-233)||(24219516-24219567)
chr5 (182-232)||(18072672-18072722)
chr5 (182-232)||(20621935-20621985)
chr5 (182-232)||(23747824-23747874)
chr5 (182-232)||(24953567-24953617)
chr5 (3-99)||(20574892-20574986)
chr5 (180-232)||(20791107-20791159)
chr5 (185-233)||(23601039-23601087)
chr5 (3-99)||(22947870-22947964)
chr5 (2-63)||(20445550-20445611)
chr5 (3-63)||(18484916-18484976)
chr5 (3-63)||(22318222-22318282)
chr5 (3-63)||(22855007-22855067)
chr5 (3-63)||(25007508-25007568)
[»] chr4 (41 HSPs)
chr4 (3-238)||(11497159-11497394)
chr4 (3-238)||(13822349-13822584)
chr4 (10-238)||(15253790-15254019)
chr4 (3-238)||(42710277-42710513)
chr4 (3-238)||(22110394-22110629)
chr4 (3-233)||(10630181-10630410)
chr4 (19-239)||(38426192-38426412)
chr4 (19-233)||(18082009-18082224)
chr4 (3-232)||(18291448-18291676)
chr4 (19-239)||(3354099-3354310)
chr4 (3-233)||(45234789-45235010)
chr4 (179-239)||(42710187-42710247)
chr4 (179-239)||(3354334-3354394)
chr4 (179-239)||(10630440-10630500)
chr4 (179-239)||(11497070-11497130)
chr4 (179-239)||(13822613-13822673)
chr4 (179-239)||(15254048-15254108)
chr4 (179-239)||(45234699-45234759)
chr4 (182-236)||(13822687-13822741)
chr4 (179-233)||(17485309-17485363)
chr4 (181-239)||(38426438-38426496)
chr4 (182-236)||(38426510-38426564)
chr4 (179-239)||(17485374-17485434)
chr4 (179-239)||(17485458-17485518)
chr4 (179-239)||(22110659-22110719)
chr4 (182-233)||(18081854-18081905)
chr4 (182-236)||(11497002-11497056)
chr4 (182-236)||(15254122-15254176)
chr4 (182-236)||(42710119-42710173)
chr4 (3-64)||(15348535-15348595)
chr4 (185-233)||(10630517-10630565)
chr4 (179-239)||(56580995-56581055)
chr4 (182-233)||(3354408-3354459)
chr4 (186-237)||(18081921-18081972)
chr4 (182-232)||(22110733-22110783)
chr4 (182-228)||(45234639-45234685)
chr4 (66-150)||(56581127-56581211)
chr4 (179-233)||(18291707-18291761)
chr4 (182-233)||(56580930-56580981)
chr4 (3-63)||(15260813-15260873)
chr4 (3-63)||(17485623-17485682)
[»] chr1 (19 HSPs)
chr1 (3-238)||(27046309-27046544)
chr1 (3-238)||(17095146-17095381)
chr1 (3-238)||(20236902-20237129)
chr1 (3-238)||(21799209-21799443)
chr1 (3-233)||(3989529-3989759)
chr1 (19-235)||(52939168-52939382)
chr1 (179-239)||(17095057-17095117)
chr1 (179-239)||(27046573-27046633)
chr1 (179-239)||(20237157-20237217)
chr1 (182-236)||(17094989-17095043)
chr1 (179-239)||(52939080-52939140)
chr1 (184-239)||(21799120-21799175)
chr1 (182-236)||(27046647-27046701)
chr1 (182-236)||(20237231-20237284)
chr1 (182-232)||(21799056-21799106)
chr1 (182-233)||(52939015-52939066)
chr1 (3-99)||(8652478-8652573)
chr1 (3-130)||(19876329-19876455)
chr1 (3-63)||(21785177-21785237)
[»] chr8 (47 HSPs)
chr8 (3-238)||(21381527-21381762)
chr8 (3-238)||(21099337-21099571)
chr8 (3-238)||(23910876-23911111)
chr8 (3-238)||(21955509-21955736)
chr8 (3-238)||(8323394-8323628)
chr8 (3-238)||(8313902-8314136)
chr8 (3-233)||(17620176-17620405)
chr8 (3-233)||(20039539-20039768)
chr8 (3-233)||(21854330-21854559)
chr8 (19-233)||(19365468-19365681)
chr8 (19-233)||(16419172-16419385)
chr8 (19-211)||(21942015-21942205)
chr8 (179-239)||(17620435-17620495)
chr8 (179-239)||(20039448-20039508)
chr8 (179-239)||(21099249-21099309)
chr8 (179-239)||(21104570-21104630)
chr8 (179-239)||(21381792-21381852)
chr8 (179-239)||(21854239-21854299)
chr8 (128-235)||(20712003-20712111)
chr8 (179-239)||(21940456-21940516)
chr8 (179-239)||(23911140-23911200)
chr8 (186-239)||(20712146-20712199)
chr8 (179-239)||(8323306-8323366)
chr8 (179-239)||(16419078-16419138)
chr8 (3-95)||(20711902-20711993)
chr8 (182-236)||(21099181-21099235)
chr8 (182-236)||(21104502-21104556)
chr8 (182-236)||(21381866-21381920)
chr8 (182-236)||(23911214-23911268)
chr8 (180-232)||(8323242-8323294)
chr8 (185-233)||(17620512-17620560)
chr8 (185-233)||(20039383-20039431)
chr8 (194-238)||(21104658-21104702)
chr8 (184-239)||(8314170-8314225)
chr8 (182-232)||(8314239-8314289)
chr8 (182-236)||(14352589-14352643)
chr8 (185-239)||(14352657-14352711)
chr8 (182-233)||(16419012-16419063)
chr8 (182-233)||(20712213-20712264)
chr8 (182-233)||(21940391-21940442)
chr8 (3-99)||(20375223-20375317)
chr8 (179-217)||(21955766-21955804)
chr8 (3-63)||(20001748-20001808)
chr8 (3-63)||(19766978-19767038)
chr8 (3-63)||(22101845-22101905)
chr8 (3-63)||(22369392-22369452)
chr8 (3-63)||(23674980-23675040)
[»] chr3 (84 HSPs)
chr3 (3-238)||(7599790-7600025)
chr3 (3-238)||(9361514-9361749)
chr3 (3-238)||(10603017-10603252)
chr3 (3-238)||(6814304-6814539)
chr3 (3-238)||(15557487-15557722)
chr3 (3-238)||(12187621-12187855)
chr3 (3-238)||(12194035-12194269)
chr3 (3-238)||(11946850-11947077)
chr3 (3-238)||(37941814-37942048)
chr3 (3-239)||(15644524-15644759)
chr3 (3-239)||(16374022-16374257)
chr3 (3-238)||(10146447-10146681)
chr3 (3-238)||(10160718-10160952)
chr3 (3-238)||(13187963-13188197)
chr3 (62-238)||(16449303-16449479)
chr3 (3-217)||(4370124-4370338)
chr3 (3-233)||(13097133-13097362)
chr3 (3-233)||(13089359-13089588)
chr3 (19-233)||(12160757-12160970)
chr3 (3-112)||(22164981-22165091)
chr3 (19-232)||(10547420-10547637)
chr3 (19-233)||(11866233-11866442)
chr3 (179-239)||(15557398-15557458)
chr3 (179-239)||(9361426-9361486)
chr3 (179-239)||(10602928-10602988)
chr3 (179-239)||(11947106-11947166)
chr3 (179-239)||(13089269-13089329)
chr3 (179-239)||(13097392-13097452)
chr3 (179-239)||(16449215-16449275)
chr3 (179-236)||(14349004-14349061)
chr3 (181-237)||(13690289-13690345)
chr3 (179-233)||(3278852-3278906)
chr3 (182-236)||(3278939-3278993)
chr3 (182-236)||(16449147-16449201)
chr3 (179-236)||(3245989-3246046)
chr3 (179-239)||(3246071-3246131)
chr3 (179-239)||(7600054-7600114)
chr3 (179-239)||(12160663-12160723)
chr3 (3-99)||(20157301-20157396)
chr3 (182-233)||(4382515-4382566)
chr3 (184-239)||(10160630-10160685)
chr3 (184-239)||(12187533-12187588)
chr3 (184-239)||(12193947-12194002)
chr3 (184-239)||(37942081-37942136)
chr3 (182-236)||(9361358-9361412)
chr3 (184-234)||(10146714-10146764)
chr3 (182-236)||(10602860-10602914)
chr3 (182-236)||(11947180-11947234)
chr3 (182-236)||(15557330-15557384)
chr3 (180-232)||(12187469-12187521)
chr3 (180-232)||(12193883-12193935)
chr3 (180-232)||(16373958-16374010)
chr3 (186-237)||(4382448-4382499)
chr3 (184-239)||(13187874-13187929)
chr3 (182-232)||(6814641-6814691)
chr3 (182-232)||(7600128-7600178)
chr3 (182-232)||(10146783-10146833)
chr3 (179-233)||(10547331-10547385)
chr3 (182-232)||(15644773-15644823)
chr3 (182-232)||(37942150-37942200)
chr3 (3-44)||(16655165-16655206)
chr3 (180-232)||(10160566-10160618)
chr3 (184-236)||(12160594-12160646)
chr3 (185-233)||(13097469-13097517)
chr3 (180-232)||(13187810-13187862)
chr3 (182-233)||(13690361-13690413)
chr3 (184-239)||(6814572-6814627)
chr3 (179-220)||(11866476-11866517)
chr3 (3-39)||(16449477-16449513)
chr3 (3-99)||(17387192-17387287)
chr3 (4-99)||(13600426-13600520)
chr3 (3-99)||(1992152-1992246)
chr3 (185-233)||(13089204-13089252)
chr3 (3-63)||(13136895-13136955)
chr3 (3-46)||(13690091-13690133)
chr3 (3-46)||(13694336-13694378)
chr3 (3-63)||(3339932-3339992)
chr3 (3-63)||(12777241-12777301)
chr3 (3-63)||(13064393-13064453)
chr3 (3-63)||(15629691-15629751)
chr3 (3-63)||(15946061-15946121)
chr3 (3-63)||(20560457-20560517)
chr3 (3-63)||(20562765-20562825)
chr3 (3-63)||(20565073-20565133)
[»] scaffold0029 (3 HSPs)
scaffold0029 (3-238)||(122804-123038)
scaffold0029 (179-239)||(123068-123128)
scaffold0029 (182-236)||(123142-123196)
[»] chr7 (59 HSPs)
chr7 (3-238)||(14550531-14550766)
chr7 (3-238)||(23514502-23514737)
chr7 (3-238)||(8717300-8717535)
chr7 (3-238)||(539310-539545)
chr7 (3-239)||(18593810-18594046)
chr7 (3-239)||(18617638-18617874)
chr7 (3-238)||(13673291-13673526)
chr7 (8-238)||(9582340-9582563)
chr7 (3-141)||(16150124-16150262)
chr7 (3-235)||(10432292-10432523)
chr7 (3-239)||(12566446-12566681)
chr7 (137-238)||(16120390-16120491)
chr7 (19-235)||(16531543-16531758)
chr7 (19-235)||(16633904-16634119)
chr7 (18-235)||(16466164-16466382)
chr7 (3-239)||(13355670-13355887)
chr7 (179-239)||(9582593-9582653)
chr7 (143-233)||(12549360-12549450)
chr7 (179-239)||(539222-539282)
chr7 (179-239)||(8717564-8717624)
chr7 (179-239)||(10432199-10432259)
chr7 (179-239)||(11921761-11921821)
chr7 (179-239)||(14550797-14550857)
chr7 (179-239)||(16120301-16120361)
chr7 (179-239)||(16466071-16466131)
chr7 (179-239)||(23514766-23514826)
chr7 (179-239)||(4312239-4312299)
chr7 (179-239)||(12549270-12549330)
chr7 (181-237)||(13657555-13657611)
chr7 (179-239)||(16531790-16531850)
chr7 (179-239)||(16633812-16633872)
chr7 (3-99)||(20107724-20107819)
chr7 (185-239)||(12566711-12566765)
chr7 (182-236)||(16120233-16120287)
chr7 (182-233)||(12566783-12566834)
chr7 (182-233)||(13657627-13657678)
chr7 (182-236)||(4312313-4312367)
chr7 (182-236)||(8717638-8717692)
chr7 (182-236)||(9582667-9582721)
chr7 (182-236)||(14550871-14550925)
chr7 (182-236)||(23514840-23514894)
chr7 (185-233)||(539157-539205)
chr7 (179-239)||(13673555-13673615)
chr7 (182-232)||(13673629-13673679)
chr7 (182-232)||(18593746-18593796)
chr7 (182-232)||(18617888-18617938)
chr7 (185-233)||(12549205-12549253)
chr7 (182-233)||(11921696-11921747)
chr7 (182-233)||(16466006-16466057)
chr7 (182-233)||(16531865-16531916)
chr7 (182-233)||(16633746-16633797)
chr7 (179-220)||(13355911-13355952)
chr7 (27-99)||(48802539-48802611)
chr7 (3-46)||(13657357-13657399)
chr7 (3-60)||(4312171-4312227)
chr7 (179-211)||(10432143-10432175)
chr7 (3-63)||(15917486-15917546)
chr7 (3-63)||(16326489-16326549)
chr7 (3-63)||(18287054-18287114)
[»] chr2 (39 HSPs)
chr2 (3-238)||(12161-12396)
chr2 (3-238)||(116978-117213)
chr2 (3-238)||(22045205-22045440)
chr2 (3-238)||(25356946-25357181)
chr2 (3-238)||(16775086-16775321)
chr2 (3-238)||(17589843-17590077)
chr2 (3-238)||(24795830-24796064)
chr2 (62-238)||(22664556-22664732)
chr2 (3-238)||(27627021-27627249)
chr2 (3-233)||(25145315-25145544)
chr2 (3-203)||(24516902-24517100)
chr2 (179-239)||(12072-12132)
chr2 (179-239)||(22664761-22664821)
chr2 (179-239)||(117242-117302)
chr2 (179-239)||(25145225-25145285)
chr2 (179-239)||(16775350-16775410)
chr2 (179-239)||(22045116-22045176)
chr2 (179-239)||(25357210-25357270)
chr2 (184-239)||(24795742-24795797)
chr2 (182-233)||(25145160-25145211)
chr2 (184-239)||(27627282-27627337)
chr2 (182-236)||(12004-12058)
chr2 (182-236)||(117316-117370)
chr2 (182-236)||(22664835-22664889)
chr2 (179-239)||(17590106-17590166)
chr2 (180-232)||(24795678-24795730)
chr2 (3-99)||(25366440-25366536)
chr2 (182-232)||(16775424-16775474)
chr2 (182-232)||(17590180-17590230)
chr2 (182-232)||(22045052-22045102)
chr2 (182-232)||(25357284-25357334)
chr2 (3-99)||(25371646-25371741)
chr2 (180-232)||(27627349-27627401)
chr2 (182-233)||(23643716-23643767)
chr2 (3-39)||(22664522-22664558)
chr2 (204-239)||(23643666-23643701)
chr2 (3-63)||(24170761-24170821)
chr2 (3-63)||(27630948-27631008)
chr2 (3-63)||(27769521-27769581)
[»] scaffold0404 (3 HSPs)
scaffold0404 (3-238)||(474-708)
scaffold0404 (184-239)||(741-796)
scaffold0404 (182-232)||(810-860)
[»] scaffold0679 (2 HSPs)
scaffold0679 (3-235)||(7446-7676)
scaffold0679 (182-232)||(7694-7744)
[»] scaffold0346 (2 HSPs)
scaffold0346 (3-235)||(4159-4389)
scaffold0346 (179-234)||(4072-4127)
[»] scaffold0206 (1 HSPs)
scaffold0206 (3-233)||(17095-17324)
[»] scaffold0230 (4 HSPs)
scaffold0230 (3-132)||(12921-13050)
scaffold0230 (134-238)||(15244-15348)
scaffold0230 (179-239)||(15378-15438)
scaffold0230 (182-236)||(15452-15506)
[»] scaffold0004 (5 HSPs)
scaffold0004 (19-239)||(252413-252634)
scaffold0004 (182-233)||(252264-252315)
scaffold0004 (181-239)||(252329-252387)
scaffold0004 (181-237)||(355029-355085)
scaffold0004 (182-233)||(354962-355013)
[»] scaffold0506 (3 HSPs)
scaffold0506 (19-233)||(2836-3048)
scaffold0506 (179-239)||(2746-2806)
scaffold0506 (182-233)||(2681-2732)
[»] scaffold0162 (3 HSPs)
scaffold0162 (3-232)||(35656-35883)
scaffold0162 (179-239)||(35565-35625)
scaffold0162 (182-233)||(35500-35551)
[»] scaffold0020 (4 HSPs)
scaffold0020 (19-239)||(120400-120621)
scaffold0020 (19-154)||(116096-116232)
scaffold0020 (181-238)||(120647-120704)
scaffold0020 (182-233)||(120719-120770)
[»] scaffold0214 (2 HSPs)
scaffold0214 (131-238)||(3439-3546)
scaffold0214 (179-239)||(3351-3411)
[»] scaffold0156 (3 HSPs)
scaffold0156 (19-233)||(291-504)
scaffold0156 (179-239)||(538-598)
scaffold0156 (182-233)||(613-664)
[»] scaffold0034 (3 HSPs)
scaffold0034 (19-233)||(59182-59395)
scaffold0034 (179-239)||(59088-59148)
scaffold0034 (182-233)||(59022-59073)
[»] scaffold0315 (4 HSPs)
scaffold0315 (91-239)||(15170-15318)
scaffold0315 (91-196)||(18467-18572)
scaffold0315 (181-239)||(15084-15144)
scaffold0315 (182-229)||(15023-15070)
[»] scaffold0220 (1 HSPs)
scaffold0220 (3-147)||(8958-9101)
[»] scaffold0974 (3 HSPs)
scaffold0974 (19-233)||(551-764)
scaffold0974 (179-239)||(798-858)
scaffold0974 (182-233)||(873-924)
[»] scaffold1941 (1 HSPs)
scaffold1941 (3-203)||(820-1018)
[»] scaffold0075 (2 HSPs)
scaffold0075 (67-233)||(26990-27156)
scaffold0075 (179-239)||(26896-26956)
[»] scaffold0026 (4 HSPs)
scaffold0026 (179-239)||(10737-10797)
scaffold0026 (183-235)||(10652-10704)
scaffold0026 (185-233)||(10814-10862)
scaffold0026 (19-61)||(10602-10644)
[»] scaffold0825 (2 HSPs)
scaffold0825 (182-239)||(3307-3364)
scaffold0825 (182-233)||(3242-3293)
[»] scaffold0222 (3 HSPs)
scaffold0222 (179-239)||(26097-26157)
scaffold0222 (182-233)||(26171-26222)
scaffold0222 (206-239)||(26040-26073)
[»] scaffold0059 (1 HSPs)
scaffold0059 (3-99)||(11823-11918)
[»] scaffold0013 (1 HSPs)
scaffold0013 (3-99)||(233480-233575)
[»] scaffold1095 (3 HSPs)
scaffold1095 (181-238)||(2550-2607)
scaffold1095 (182-233)||(2622-2673)
scaffold1095 (179-239)||(2464-2524)
[»] scaffold0216 (2 HSPs)
scaffold0216 (3-63)||(10852-10911)
scaffold0216 (101-141)||(10948-10988)
[»] scaffold0032 (1 HSPs)
scaffold0032 (44-129)||(90695-90780)
[»] scaffold0117 (1 HSPs)
scaffold0117 (3-99)||(32238-32333)
[»] scaffold1225 (1 HSPs)
scaffold1225 (6-99)||(1049-1141)
[»] scaffold0328 (1 HSPs)
scaffold0328 (3-99)||(928-1022)
[»] scaffold0656 (1 HSPs)
scaffold0656 (3-63)||(3241-3301)
[»] scaffold0258 (1 HSPs)
scaffold0258 (3-63)||(22862-22922)
[»] scaffold0078 (1 HSPs)
scaffold0078 (3-63)||(29937-29997)
[»] scaffold0035 (1 HSPs)
scaffold0035 (3-63)||(51213-51273)
[»] scaffold0012 (1 HSPs)
scaffold0012 (3-63)||(12165-12225)


Alignment Details
Target: chr6 (Bit Score: 232; Significance: 1e-128; HSPs: 62)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 15698991 - 15699226
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15698991 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 15699090  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15699091 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 15699190  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||||||||    
T  15699191 ggaggtaggccctccgacttcctacgtgaagatgat 15699226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 22166329 - 22166094
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22166329 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 22166230  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22166229 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 22166130  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||||||||    
T  22166129 ggaggtaggccctccgacttcctacgtgaagatgat 22166094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 22243248 - 22243483
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22243248 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 22243347  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22243348 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 22243447  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||||||||    
T  22243448 ggaggtaggccctccgacttcctacgtgaagatgat 22243483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 3 - 237
Target Start/End: Complemental strand, 22062285 - 22062051
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  22062285 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgctttttaatcttagtggtacattaacctttaaagat 22062186  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22062185 tctcaaagtgcaagtagtataagtgagtataagggaattcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 22062086  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatga 237  Q
    |||||||||||||||||||||||||||||||||||    
T  22062085 ggaggtaggccctccgacttcctacgtgaagatga 22062051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 20017008 - 20016773
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||     
T  20017008 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttctaatcatagtggtgcattaacctttaaagac 20016909  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||    
T  20016908 tctcaaagcgccagtagtataagtgagtataagggagatcataaaaagccaaaaagccaaataaattccaagatctcatcgccgaatctagattggggaa 20016809  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||| ||||    
T  20016808 ggaggtaggccctccgacttcctacgtgaaggtgat 20016773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 22767895 - 22767661
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||| ||    
T  22767895 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttctaatcttaatggtgcattaacctttaaaaat 22767796  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  22767795 tctcaaagcgccagtagtataagtgagtataagggagatcataaaaagccaaaaagccaaat-aattccaagatctcatcactgaatctagattggggaa 22767697  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||| ||||    
T  22767696 ggaggtaggccctccgacttcctacgtgaaggtgat 22767661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 24856024 - 24855790
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  24856024 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttctaatcttagtggtgcattaacctttaaaaat 24855925  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  24855924 tctcaaagcgccagtagtataagtgagtataagggagatcataaaaagccaaaaagccaaat-aattccaagatctcatcactgaatctagattggggaa 24855826  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||| ||| ||||    
T  24855825 ggaggtaggccctccgacttcctacgtaaaggtgat 24855790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 15850761 - 15850525
Alignment:
Q  3 caatgagaaaaacacaaa-gttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaaga 101  Q
    |||||||||||||||||| || ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15850761 caatgagaaaaacacaaaagtggcttcccttgagtgaatgtatgaataggtattttaaggaaacgcgttttaatcttagtggggcattaacctttaaaga 15850662  T
Q  102 ttctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattcc-aagatctcatcattgaatctagattgggg 200  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  15850661 ttctcaaagtgctagtagtataagttagtataagggaattcataaaaagcc-aaaagccaaataaattccaaagatctcatcattgaatctagattgggg 15850563  T
Q  201 aaggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||||||||||    
T  15850562 aaggaggtaggccctccgacttcctacgtgaagatgat 15850525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 20169678 - 20169912
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | || |||||||||||||||||||||||||||| ||    
T  20169678 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacacattctaatcttagtggtgcattaacctttaaaaat 20169777  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||    
T  20169778 tctcaaagcgccagtagtataagtgagtataagggagatcataaaaagccaaaaagccaaat-aattccaaggtctcatcactgaatctagattggggaa 20169876  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||| ||||    
T  20169877 ggaggtaggccctccgacttcctacgtgaaggtgat 20169912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 5 - 239
Target Start/End: Complemental strand, 18185262 - 18185029
Alignment:
Q  5 atgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagattc 104  Q
    ||||||||||||||| |||||||||||||||||| ||||| ||| ||||||||||||||| ||||| |||| |||||||| | || ||||||||| ||||    
T  18185262 atgagaaaaacacaa-gttgcttcccttgagtaagtgtataaataggtattttaaggaaatgcgttctaattttagtggtacgttgacctttaaaaattc 18185164  T
Q  105 tcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaagg 204  Q
    |||||||   ||||||||||||||||||||||||||| ||||||||||||| ||||||||  ||| |||| |  ||||||||||||||||||||||||||    
T  18185163 tcaaagtaaaagtagtataagttagtataagggagtttataaaaagccaaatagccaaattgatttcaaggttgcatcattgaatctagattggggaagg 18185064  T
Q  205 aggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||||||||||||||||||||||||||| |||||    
T  18185063 aggtaggccctccgacttcctacgtgaaggtgatg 18185029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 239
Target Start/End: Original strand, 18447650 - 18447885
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||| |||||||| | || ||||||||| ||    
T  18447650 caatgagaaaaacacaa-gttgcttcccttgagtaagtgtatgaataggtattttaaggaaatgcgttctaattttagtggtacgttgacctttaaaaat 18447748  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    | |||||||   ||||||||||||||||||||||||||| ||||||| ||||| ||||||||  ||| |||| |  ||| ||||||||||||||||||||    
T  18447749 tttcaaagtaaaagtagtataagttagtataagggagtttataaaaatccaaatagccaaatggatttcaaggttgcattattgaatctagattggggaa 18447848  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    || ||||||||||| |||||||||||||||| |||||    
T  18447849 gggggtaggccctcagacttcctacgtgaaggtgatg 18447885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 25 - 239
Target Start/End: Original strand, 18011322 - 18011537
Alignment:
Q  25 cttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagattctcaaa-gtgccagtagtata 123  Q
    ||||||||||||||||||||| || ||||||||||||||| ||||| |||| |||||||| |||| ||||||||| ||||||||| ||   | |||||||    
T  18011322 cttcccttgagtaaatgtatggataggtattttaaggaaatgcgttctaatattagtggtacattgacctttaaaaattctcaaaagtaaaattagtata 18011421  T
Q  124 agttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaaggaggtaggccctccgacttc 223  Q
    |||||||||||||||||  ||||||||||||| ||||||||  ||| |||| || |||||||||||||||||||||||||| ||||||||||||||||||    
T  18011422 agttagtataagggagtctataaaaagccaaatagccaaattgatttcaaggtcacatcattgaatctagattggggaagggggtaggccctccgacttc 18011521  T
Q  224 ctacgtgaagatgatg 239  Q
    |||||||||| |||||    
T  18011522 ctacgtgaaggtgatg 18011537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 3 - 232
Target Start/End: Original strand, 18853449 - 18853677
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||| ||||| || | ||||||||   || ||||||||| ||    
T  18853449 caatgagaaaaacacaa-gttgcttcccttgagtaagtgtatgaataggtattttaaggaaatgcgttctagttttagtggtatgttgacctttaaaaat 18853547  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
     ||||||||   ||||||||||||||||||||||||||| ||| ||||| ||| ||||||||  ||| |||| |  ||||||||||||||||||| ||||    
T  18853548 cctcaaagtaaaagtagtataagttagtataagggagtttatagaaagcaaaatagccaaattgatttcaaggttgcatcattgaatctagattgaggaa 18853647  T
Q  203 ggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||||||||||    
T  18853648 ggaggtaggccctccgacttcctacgtgaa 18853677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 3 - 233
Target Start/End: Original strand, 29595138 - 29595356
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||| |||||||| |||| ||||||||| |     
T  29595138 caatgagaaaaacacaa-gttgcttcccttgagtaagtgtatgaataggtattttaaggaaatgcgttctaattttagtggtacattgacctttaaaaac 29595236  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
     |||||          ||| |||| ||||||||||||   ||||||||||||| |||||||  |||| ||||||  ||| ||||||||||||||||||||    
T  29595237 cctcaa----------gtaaaagt-agtataagggagcctataaaaagccaaatagccaaaataatttcaagattgcattattgaatctagattggggaa 29595325  T
Q  203 ggaggtaggccctccgacttcctacgtgaag 233  Q
    || ||||||||||||||||||||||||||||    
T  29595326 gggggtaggccctccgacttcctacgtgaag 29595356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 25625217 - 25625427
Alignment:
Q  19 aagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagattctcaaagtgccagta 118  Q
    ||||| ||||||||||||||||||||| || ||||||||||||||| ||||| |||| |||||||| | || ||||||||| |||||||||||           
T  25625217 aagtttcttcccttgagtaaatgtatggataggtattttaaggaaatgcgttctaatattagtggtacgttgacctttaaaaattctcaaagt------- 25625309  T
Q  119 gtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaaggaggtaggccctccg 218  Q
      | |||| |||||||||||||  ||||||||||||  ||||||||  ||| |||| ||||||||||| ||||||||||||||||| ||||||||||| |    
T  25625310 --aaaagt-agtataagggagtctataaaaagccaattagccaaattgatttcaaggtctcatcattggatctagattggggaagggggtaggccctctg 25625406  T
Q  219 acttcctacgtgaagatgatg 239  Q
    || |||||||||||| |||||    
T  25625407 acatcctacgtgaaggtgatg 25625427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 15699255 - 15699315
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15699255 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 15699315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 22062019 - 22061959
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22062019 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 22061959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 22166065 - 22166005
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22166065 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 22166005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 22243512 - 22243572
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  22243512 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 22243572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 18011563 - 18011621
Alignment:
Q  181 tcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18011563 tcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 18011621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 15850496 - 15850436
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  15850496 catcattgaatctagattggggaaggaggtaggcccttagacttcctacgtgaagatgatg 15850436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 30672341 - 30672281
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  30672341 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgcaggtgatg 30672281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 29595391 - 29595446
Alignment:
Q  184 ttgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29595391 ttgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 29595446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 15699329 - 15699383
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  15699329 cattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatg 15699383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 18185003 - 18184953
Alignment:
Q  181 tcattgaatctagattggggaaggaggtaggccctccgacttcctacgtga 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18185003 tcattgaatctagattggggaaggaggtaggccctccgacttcctacgtga 18184953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 18447909 - 18447963
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18447909 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaag 18447963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 18853710 - 18853768
Alignment:
Q  181 tcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18853710 tcattgaatttagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 18853768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 19586001 - 19585947
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19586001 cattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatg 19585947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 22243586 - 22243640
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22243586 cattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatg 22243640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 25962514 - 25962568
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25962514 cattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatg 25962568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 25962994 - 25963048
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25962994 cattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatg 25963048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 25967161 - 25967215
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25967161 cattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatg 25967215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 25967641 - 25967695
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25967641 cattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatg 25967695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 19586075 - 19586015
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||    
T  19586075 catcattgaatctagattgaggaaggggttaggccctccgacttcctacgtgaagatgatg 19586015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 19586159 - 19586099
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||    
T  19586159 catcattgaatctagatttgggatggaggtaggccctccgacttcctacgtgaaggtgatg 19586099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 233
Target Start/End: Complemental strand, 21561009 - 21560957
Alignment:
Q  181 tcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21561009 tcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaag 21560957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 18853782 - 18853833
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18853782 cattgaatctagattggggaagggggtaggccctccgacttcctacgtgaag 18853833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 22767628 - 22767573
Alignment:
Q  184 ttgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22767628 ttgaaactagattggggaaggaggtaggccctccgacttcctacgtgaagacgatg 22767573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 29595460 - 29595511
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29595460 cattgaatctagattggggaagggggtaggccctccgacttcctacgtgaag 29595511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 20169945 - 20169995
Alignment:
Q  184 ttgaatctagattggggaaggaggtaggccctccgacttcctacgtgaaga 234  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20169945 ttgaaactagattggggaaggaggtaggccctccgacttcctacgtgaaga 20169995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 22061945 - 22061891
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  22061945 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaagatg 22061891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 22165991 - 22165937
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  22165991 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaagatg 22165937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 231
Target Start/End: Original strand, 18011635 - 18011684
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtga 231  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  18011635 cattgaatctagattggggaagggggtaggccctccgacttcctacgtga 18011684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 20016744 - 20016684
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||| ||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  20016744 catcgttgaaactagattggggaaggaggtaggccctccgactccctacgtgaagacgatg 20016684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 20170012 - 20170064
Alignment:
Q  180 atcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  20170012 atcattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 20170064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 22767561 - 22767509
Alignment:
Q  180 atcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  22767561 atcattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 22767509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 24855757 - 24855702
Alignment:
Q  184 ttgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  24855757 ttgaaactagattggggaaggaggtaggccccccgacttcctacgtgaagacgatg 24855702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 20016670 - 20016620
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  20016670 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 20016620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 24855688 - 24855638
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  24855688 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 24855638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 25632113 - 25632033
Alignment:
Q  19 aagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaa 99  Q
    |||||||||||||||||||| |||||||||  ||||||||||||||  |||| |||| |||||||| | ||||| ||||||    
T  25632113 aagttgcttcccttgagtaagtgtatgaatatgtattttaaggaaatacgttctaattttagtggtacgttaacttttaaa 25632033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 25962442 - 25962493
Alignment:
Q  181 tcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||| ||||    
T  25962442 tcattgaatctagattggggaagggggtaagccctccgacttcctacatgaa 25962493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 25967089 - 25967140
Alignment:
Q  181 tcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||| ||||    
T  25967089 tcattgaatctagattggggaagggggtaagccctccgacttcctacatgaa 25967140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 15850422 - 15850368
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||| ||||||||||||||||| | ||||||||||||| |||||||||||||||    
T  15850422 cattggatctagattggggaaggggataggccctccgacctcctacgtgaagatg 15850368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 30672267 - 30672213
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||| ||||| |||||||||| ||||||||    
T  30672267 cattgaatctagattggggaagggggtagaccctctgacttcctacatgaagatg 30672213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 25962922 - 25962973
Alignment:
Q  181 tcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||||| ||||    
T  25962922 tcattgaatctagattggggaagggggtaagccctccaacttcctacatgaa 25962973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 232
Target Start/End: Original strand, 25967569 - 25967620
Alignment:
Q  181 tcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||||| ||||    
T  25967569 tcattgaatctagattggggaagggggtaagccctccaacttcctacatgaa 25967620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 30672507 - 30672449
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaagga 62  Q
    ||||||||||||||||| ||||| ||||||||| || ||||||||| |||||||||||||    
T  30672507 caatgagaaaaacacaa-gttgcatcccttgagaaattgtatgaataggtattttaagga 30672449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 239
Target Start/End: Complemental strand, 20108283 - 20108245
Alignment:
Q  201 aaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  20108283 aagggggtaggccctccgacttcctacgtgaagatgatg 20108245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 25625453 - 25625506
Alignment:
Q  181 tcattgaatctagattggggaaggaggtagg-ccctccgacttcctacgtgaag 233  Q
    |||||||||||||||||||||||| |||||| ||||| ||||| ||||||||||    
T  25625453 tcattgaatctagattggggaagggggtaggcccctcagactttctacgtgaag 25625506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 19586325 - 19586267
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaagga 62  Q
    ||||||||||| ||||| ||||| ||||||||| || ||||||||| |||||||||||||    
T  19586325 caatgagaaaagcacaa-gttgcatcccttgagcaattgtatgaataggtattttaagga 19586267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 25962276 - 25962334
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaagga 62  Q
    ||||||||||| ||| | ||||| ||||||||| |||||||||||| |||||||||||||    
T  25962276 caatgagaaaagcacga-gttgcatcccttgagcaaatgtatgaataggtattttaagga 25962334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 25966923 - 25966981
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaagga 62  Q
    ||||||||||| ||| | ||||| ||||||||| |||||||||||| |||||||||||||    
T  25966923 caatgagaaaagcacga-gttgcatcccttgagcaaatgtatgaataggtattttaagga 25966981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 232; Significance: 1e-128; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 20596609 - 20596374
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20596609 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 20596510  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20596509 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 20596410  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||||||||    
T  20596409 ggaggtaggccctccgacttcctacgtgaagatgat 20596374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 20602895 - 20602660
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20602895 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 20602796  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20602795 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 20602696  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||||||||    
T  20602695 ggaggtaggccctccgacttcctacgtgaagatgat 20602660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 20609186 - 20608951
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20609186 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 20609087  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20609086 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 20608987  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||||||||    
T  20608986 ggaggtaggccctccgacttcctacgtgaagatgat 20608951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 23711457 - 23711222
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23711457 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacacgttttaatcttagtggtgcattaacctttaaagat 23711358  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23711357 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 23711258  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||||||||    
T  23711257 ggaggtaggccctccgacttcctacgtgaagatgat 23711222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 24939963 - 24940198
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24939963 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 24940062  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24940063 tctcaaagtgccagtagtataagttagtataagggagtgcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 24940162  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||||||||    
T  24940163 ggaggtaggccctccgacttcctacgtgaagatgat 24940198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 15734969 - 15735204
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15734969 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 15735068  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    ||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15735069 tctcaaaatgccagtagtataagtcagtataagggagttcatgaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 15735168  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||||||||    
T  15735169 ggaggtaggccctccgacttcctacgtgaagatgat 15735204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 24953953 - 24953719
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  24953953 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttctaatcttagtggtgcattaacctttaaaaat 24953854  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  24953853 tctcaaagcgccagtagtataagtgagtataagggagatcataaaaagccaaaaagccaaat-aattccaagatctcatcactgaatctagattggggaa 24953755  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||| ||||    
T  24953754 ggaggtaggccctccgacttcctacgtgaaggtgat 24953719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 20621597 - 20621832
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||     
T  20621597 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaagaaaacgcgttctaatcttagtggtgcattaacctttaaagac 20621696  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||    
T  20621697 tctcaaagcgccagtagtataagtgagtataagggagatcataaaaagccaaaaagccaaataaattccaagatctcatcgccgaatctagattggggaa 20621796  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||| ||||    
T  20621797 ggaggtaggccctccgacttcctacgtgaaggtgat 20621832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 23747485 - 23747720
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||     
T  23747485 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgtgttctaatcttagtggtgcattaacctttaaagac 23747584  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||    
T  23747585 tctcaaagcgccagtagtataagtgagtataagggagatcataaaaagccaaaaagccaaataatttccaggatctcatcactgaatctagattggggaa 23747684  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||| ||||    
T  23747685 ggaggtaggccctccgacttcctacgtgaaggtgat 23747720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 20791496 - 20791259
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  20791496 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttctaatcttagtggtgcattaacctttaaaaat 20791397  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcat---aaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggg 199  Q
    |||||||| ||||||||||||||| |||||||||||| ||||   |||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  20791396 tctcaaagcgccagtagtataagtgagtataagggagatcataaaaaaaagccaaaaagccaaat-aattccaagatctcatcactgaatctagattggg 20791298  T
Q  200 gaaggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  20791297 gaaggaggtaggccctccgacttcctacgtgaaggtgat 20791259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 18072335 - 18072569
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  18072335 caatgagaaaaacacaaagttgcttcccttgagtaagtgtatgaataggtaatttaaggaaacacgttttaatcttagtggtgcattaacctttaaaaat 18072434  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| || |||||||||||| ||||||||||||  ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  18072435 tctcaaagcgcaagtagtataagtgagtataagggagaccataaaaagccaaaaagccaaat-aattccaagatctcatcactgaatctagattggggaa 18072533  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||| ||||    
T  18072534 ggaggtaggccctccgacttcctacgtgaaggtgat 18072569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 3 - 233
Target Start/End: Complemental strand, 23601423 - 23601194
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||   |||||||| |||||||| | || ||||||||| |     
T  23601423 caatgagaaaaacacaa-gttgcttcccttgagtaagtgtatgaataggtattttaaggaaatatgttttaattttagtggtacgttgacctttaaaaac 23601325  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||||   |||||||||||||||||||| |||||| ||||||||||||| |||||||  |||| |||| |  ||| ||||||||||||||||||||    
T  23601324 tctcaaagtaaaagtagtataagttagtataaaggagtttataaaaagccaaatagccaaaataatttcaaggttgcattattgaatctagattggggaa 23601225  T
Q  203 ggaggtaggccctccgacttcctacgtgaag 233  Q
    |||||||||||||||||||||||||||||||    
T  23601224 ggaggtaggccctccgacttcctacgtgaag 23601194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 24219267 - 24219501
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||| ||||| || | ||||||||   || ||||||||| ||    
T  24219267 caatgagaaaaacacaa-gttgcttcccttgagtaagtgtatgaataggtattttaaggaaatgcgttctagttttagtggtatgttgacctttaaaaat 24219365  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||||   ||| ||||||||||||||||||||||| ||||||||| ||| ||||||||  ||| |||| |  ||||| ||||||||||||||||||    
T  24219366 tctcaaagtaaaagtggtataagttagtataagggagtttataaaaagcaaaatagccaaattgatttcaaggttacatcactgaatctagattggggaa 24219465  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    || |||||||||||||||||||||||||||||||||    
T  24219466 gggggtaggccctccgacttcctacgtgaagatgat 24219501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 3 - 233
Target Start/End: Complemental strand, 21281698 - 21281468
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||| |||||||| | |||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||| |||||||| | || ||||||||| ||    
T  21281698 caatgaaaaaaacacta-gttgcttcccttgagtaagtgtatgaataggtattttaaggaaatgcgttctaattttagtggtacgttgacctttaaaaat 21281600  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagcc-aaataaattccaagatctcatcattgaatctagattgggga 201  Q
    |||| ||||   ||||||| |||||||||||| |||||| |||||||| |||| |||| ||||||||| |||| |  ||| |||||||||||||||||||    
T  21281599 tctctaagtaaaagtagtaaaagttagtataaaggagtttataaaaagtcaaatagccaaaataaatttcaaggttgcattattgaatctagattgggga 21281500  T
Q  202 aggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||||||| ||||||||||||||||    
T  21281499 aggaggtaggccctctgacttcctacgtgaag 21281468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 24940228 - 24940288
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24940228 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 24940288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 15735233 - 15735293
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15735233 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 15735293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 21281438 - 21281378
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21281438 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 21281378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 20596346 - 20596286
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20596346 catcgttgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 20596286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 20602632 - 20602572
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20602632 catcgttgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 20602572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 20608923 - 20608863
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20608923 catcgttgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 20608863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 23601164 - 23601104
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  23601164 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagaagatg 23601104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 23711193 - 23711133
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  23711193 catcattgaatctagattggggaaggggttaggccctccgacttcctacgtgaagatgatg 23711133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 24940302 - 24940356
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24940302 cattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatg 24940356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 20621861 - 20621921
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20621861 catcgttgaaactagattggggaaggaggtaggccctccgacttcctacgtgaagacgatg 20621921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 23747750 - 23747810
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  23747750 catcgttgaaactagattggggaaggaggtaggccctccgacttcctacgtgaagacgatg 23747810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 20791226 - 20791171
Alignment:
Q  184 ttgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  20791226 ttgaaactagattggggaaggaggtaggccctccgacttcctacgtgaagacgatg 20791171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 24953686 - 24953631
Alignment:
Q  184 ttgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24953686 ttgaaactagattggggaaggaggtaggccctccgacttcctacgtgaagacgatg 24953631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 15735307 - 15735361
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  15735307 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaagatg 15735361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 20596272 - 20596218
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  20596272 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaagatg 20596218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 20602558 - 20602504
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  20602558 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaagatg 20602504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 20608849 - 20608795
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  20608849 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaagatg 20608795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 23711119 - 23711065
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  23711119 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaagatg 23711065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 18072603 - 18072658
Alignment:
Q  184 ttgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  18072603 ttgaaactagattggggaaggaggtaggccctccgacttcctacgtaaagacgatg 18072658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 24219516 - 24219567
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  24219516 cattgaatttagattggggaagggggtaggccctccgacttcctacgtgaag 24219567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 18072672 - 18072722
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  18072672 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 18072722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 20621935 - 20621985
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  20621935 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 20621985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 23747824 - 23747874
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  23747824 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 23747874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 24953617 - 24953567
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  24953617 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 24953567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 20574892 - 20574986
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaa 99  Q
    ||||||||||| ||||| ||||| ||||||||| || ||||||||| |||||||||||| | | |||| |||| ||||||||||||||||| |||||    
T  20574892 caatgagaaaagcacaa-gttgcatcccttgagcaactgtatgaataggtattttaagg-agcacgttctaattttagtggtgcattaacccttaaa 20574986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 20791159 - 20791107
Alignment:
Q  180 atcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||| ||||    
T  20791159 atcattgaatctagattggggaagggggtaggccctccgacctcctacatgaa 20791107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 23601087 - 23601039
Alignment:
Q  185 tgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||    
T  23601087 tgaatctagattggggaagggggtaggcccttcgacttcctacgtgaag 23601039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 22947870 - 22947964
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaa 99  Q
    ||||||||||| ||||| ||| | ||||||||| || ||||||||| |||||||||||| | | |||| |||| |||||||| |||||||| |||||    
T  22947870 caatgagaaaagcacaa-gtttcatcccttgagcaagtgtatgaataggtattttaagg-agcacgttctaattttagtggtacattaacccttaaa 22947964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 20445611 - 20445550
Alignment:
Q  2 gcaatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    |||||||||||| |||  ||||||   |||||||||| ||||||||| ||||||||||||||    
T  20445611 gcaatgagaaaagcacctagttgcaatccttgagtaagtgtatgaataggtattttaaggaa 20445550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 18484976 - 18484916
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    ||||||||||| |||  ||||||   |||||||||| ||||||||| ||||||||||||||    
T  18484976 caatgagaaaagcacctagttgcaatccttgagtaagtgtatgaataggtattttaaggaa 18484916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 22318282 - 22318222
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    ||||||||||| |||  ||||||   |||||||||| ||||||||| ||||||||||||||    
T  22318282 caatgagaaaagcacctagttgcaatccttgagtaagtgtatgaataggtattttaaggaa 22318222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 22855007 - 22855067
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    ||||||||||| |||  ||||||   |||||||||| ||||||||| ||||||||||||||    
T  22855007 caatgagaaaagcacctagttgcaatccttgagtaagtgtatgaataggtattttaaggaa 22855067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 25007568 - 25007508
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    |||||||||||||||   |||||   |||||||||| ||||||||| ||||||||||||||    
T  25007568 caatgagaaaaacacctggttgcaatccttgagtaagtgtatgaataggtattttaaggaa 25007508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 232; Significance: 1e-128; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 11497394 - 11497159
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11497394 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 11497295  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11497294 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 11497195  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||||||||    
T  11497194 ggaggtaggccctccgacttcctacgtgaagatgat 11497159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 13822349 - 13822584
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13822349 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 13822448  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13822449 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 13822548  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||||||||    
T  13822549 ggaggtaggccctccgacttcctacgtgaagatgat 13822584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 10 - 238
Target Start/End: Original strand, 15253790 - 15254019
Alignment:
Q  10 aaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagattctcaaa 109  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15253790 aaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagattctcaaa 15253889  T
Q  110 gtgccagtagtataagttagtataagggagttcataaaaagccaaaaagcc-aaataaattccaagatctcatcattgaatctagattggggaaggaggt 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  15253890 gtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaaattaattccaagatctcatcattgaatctagattggggaaggaggt 15253989  T
Q  209 aggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||    
T  15253990 aggccctccgacttcctacgtgaagatgat 15254019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 42710513 - 42710277
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42710513 caataagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacacgttttaatcttagtggtgcattaacctttaaagat 42710414  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattcc-aagatctcatcattgaatctagattgggga 201  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  42710413 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaaagatctaatcattgaatctagattgggga 42710314  T
Q  202 aggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    |||||||||||||||||||||||||||||||||||||    
T  42710313 aggaggtaggccctccgacttcctacgtgaagatgat 42710277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 22110394 - 22110629
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  22110394 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttctaatcttagtggtgcattaacctttaaagac 22110493  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22110494 tctcaaagcgccagtagtataagtgagtataagggagatcataaaaagccaaaaagccaaataaattccaagatctcatcactgaatctagattggggaa 22110593  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||| ||||    
T  22110594 ggaggtaggccctccgacttcctacgtgaaggtgat 22110629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 3 - 233
Target Start/End: Original strand, 10630181 - 10630410
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||| || |||||||||||||||||| ||||||||| |||||||||||||||   |||||||| |||||||| | || ||||||||| |     
T  10630181 caatgagaaaaacataa-gttgcttcccttgagtaagtgtatgaataggtattttaaggaaatatgttttaattttagtggtacgttgacctttaaaaac 10630279  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||||   |||||||||||||||||||| |||||| ||||||||||||| |||||||  |||| |||| |  ||| ||||||||||||||||||||    
T  10630280 tctcaaagtaaaagtagtataagttagtataaaggagtttataaaaagccaaatagccaaaataatttcaaggttgcattattgaatctagattggggaa 10630379  T
Q  203 ggaggtaggccctccgacttcctacgtgaag 233  Q
    |||||||||||||||||||||||||||||||    
T  10630380 ggaggtaggccctccgacttcctacgtgaag 10630410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 38426192 - 38426412
Alignment:
Q  19 aagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagattctcaaagtgccagta 118  Q
    ||||||||||||||||||||||||||| ||  |||||||||||||| ||||| |||| |||||||| |  | ||||||||| |||||||||||   ||||    
T  38426192 aagttgcttcccttgagtaaatgtatggatatgtattttaaggaaatgcgttctaatattagtggtacgctgacctttaaaaattctcaaagtaaaagta 38426291  T
Q  119 gtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaaggaggtaggccctccg 218  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||  ||| |||| || |||||||| ||||||||||||||||  |||||||||||||    
T  38426292 gtataagttagtataagggagtctataaaaagccaaatagccaaattgatttcaaggtcgcatcattggatctagattggggaagagggtaggccctccg 38426391  T
Q  219 acttcctacgtgaagatgatg 239  Q
    ||||||||||||||| |||||    
T  38426392 acttcctacgtgaaggtgatg 38426412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 18082224 - 18082009
Alignment:
Q  19 aagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagattctcaaa-gtgccagt 117  Q
    ||||||||||||||||||||||||||| |  ||||||||||||||| ||||| |||| |||||||| | || ||||||||| ||||||||| ||   |||    
T  18082224 aagttgcttcccttgagtaaatgtatggaaaggtattttaaggaaatgcgttctaatattagtggtacgttgacctttaaaaattctcaaaagtaaaagt 18082125  T
Q  118 agtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaaggaggtaggccctcc 217  Q
    |||||||||||||||||||||||  ||||||||||||| ||||||||  ||| |||| || |||||||| ||||||||||||||||| ||||||||||||    
T  18082124 agtataagttagtataagggagtctataaaaagccaaatagccaaattgatttcaaggtcgcatcattggatctagattggggaagggggtaggccctcc 18082025  T
Q  218 gacttcctacgtgaag 233  Q
     |||||||||| ||||    
T  18082024 aacttcctacgggaag 18082009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 3 - 232
Target Start/End: Original strand, 18291448 - 18291676
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||| || || |||| ||| |||| | || || |||||| ||    
T  18291448 caatgagaaaaacacaa-gttgcttcccttgagtaagtgtatgaataggtattttaaggaaatgcattctaattttactggtacgttgacatttaaaaat 18291546  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||||   | |||||||| ||||||||||| |||| ||||||| ||||| ||||||||  ||| |||| |  ||| ||||||||||||||||||||    
T  18291547 tctcaaagtaaaattagtataatttagtataaggaagtttataaaaatccaaatagccaaattgatttcaaggttgcattattgaatctagattggggaa 18291646  T
Q  203 ggaggtaggccctccgacttcctacgtgaa 232  Q
    || |||||||||||||| ||||||||||||    
T  18291647 gggggtaggccctccgatttcctacgtgaa 18291676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 3354099 - 3354310
Alignment:
Q  19 aagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagattctcaaagtgccagta 118  Q
    ||||||||||||||||||||||||||| || ||||||||||||||| || || |||| |||||||| |||| ||||||||| |||||||||||           
T  3354099 aagttgcttcccttgagtaaatgtatggataggtattttaaggaaatgcattctaatattagtggtacattgacctttaaaaattctcaaagt------- 3354191  T
Q  119 gtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaaggaggtaggccctccg 218  Q
      ||||||||||||||||| ||  ||||||||||||| ||||||||  ||| |||| |  ||| |||||||||||||||||||||| |||||||||||||    
T  3354192 --ataagttagtataagggggtctataaaaagccaaatagccaaatttatttcaaggttgcattattgaatctagattggggaagggggtaggccctccg 3354289  T
Q  219 acttcctacgtgaagatgatg 239  Q
    ||||||||||||||| |||||    
T  3354290 acttcctacgtgaaggtgatg 3354310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 233
Target Start/End: Complemental strand, 45235010 - 45234789
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaa-cgcgttttaatcttagtggtgcattaacctttaaaga 101  Q
    ||||||||||| ||||| |||| ||||||| ||||| ||||||||| ||||||||||||||| |||||| |||| |||||||| | || ||||||||| |    
T  45235010 caatgagaaaagcacaa-gttgtttcccttaagtaagtgtatgaataggtattttaaggaaaacgcgttctaattttagtggtacgttgacctttaaa-a 45234913  T
Q  102 ttctcaa-agtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattgggg 200  Q
    ||||  | |||   |||||||||||||||| |||||||||| |||||| || ||| |         ||| |||| |  ||||||||||||||||||||||    
T  45234912 ttctttagagtaaaagtagtataagttagtgtaagggagtttataaaaggcaaaata---------atttcaaggttgcatcattgaatctagattgggg 45234822  T
Q  201 aaggaggtaggccctccgacttcctacgtgaag 233  Q
    |||||||||||||||||||||||||||||||||    
T  45234821 aaggaggtaggccctccgacttcctacgtgaag 45234789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 42710247 - 42710187
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42710247 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 42710187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 3354334 - 3354394
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3354334 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 3354394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 10630440 - 10630500
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10630440 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 10630500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 11497130 - 11497070
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11497130 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 11497070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 13822613 - 13822673
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13822613 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 13822673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 15254048 - 15254108
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15254048 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 15254108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 45234759 - 45234699
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45234759 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 45234699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 13822687 - 13822741
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13822687 cattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatg 13822741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 17485363 - 17485309
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17485363 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaag 17485309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 38426438 - 38426496
Alignment:
Q  181 tcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  38426438 tcattgaatctagattggggaagggggtaggccctctgacttcctacgtgaagatgatg 38426496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 38426510 - 38426564
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  38426510 cattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatg 38426564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 17485434 - 17485374
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  17485434 catcatttaatctagattggggaagggggtaggccctccgactttctacgtgaagatgatg 17485374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 17485518 - 17485458
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||    
T  17485518 catcattgaatctagattagggaagggggtaggccctccgacttcctacgtgaaggtgatg 17485458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 22110659 - 22110719
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22110659 catcgttgaaactagattggggaaggaggtaggccctccgacttcctacgtgaagacgatg 22110719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 18081905 - 18081854
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18081905 cattgaatctagattggggaagggggtaggccctccgacttcctacgtgaag 18081854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 11497056 - 11497002
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  11497056 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaagatg 11497002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 15254122 - 15254176
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  15254122 cattgaatctagattggggaagggggtaggccctccgacttcctatgtgaagatg 15254176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 42710173 - 42710119
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  42710173 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaagatg 42710119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 15348595 - 15348535
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaa 64  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||    
T  15348595 caatgagaaaaacacaa-gttgcttcccttgagtaagtgtatgaataggtattttaaggaaa 15348535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 10630517 - 10630565
Alignment:
Q  185 tgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10630517 tgaatctagattggggaagggggtaggccctccgacttcctacgtgaag 10630565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 56581055 - 56580995
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||||||||||||||||| |||||| |||||||||| | |||||||||||||||||||||    
T  56581055 catcattgaatctagattgaggaagggggtaggccctacaacttcctacgtgaagatgatg 56580995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 3354408 - 3354459
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  3354408 cattgaatctaaattggggaagggggtaggccctccgacttcctacgtgaag 3354459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 18081972 - 18081921
Alignment:
Q  186 gaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatga 237  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  18081972 gaatctagattggggaagggggtaggccctccgacttcctacgagaagatga 18081921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 22110733 - 22110783
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  22110733 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 22110783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 228
Target Start/End: Complemental strand, 45234685 - 45234639
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacg 228  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  45234685 cattgaatctagattggggaagggggtaggccctccgacttcctacg 45234639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 150
Target Start/End: Complemental strand, 56581211 - 56581127
Alignment:
Q  66 gcgttttaatcttagtggtgcattaacctttaaagattctcaaagtgccagtagtataagttagtataagggagttcataaaaag 150  Q
    ||||| |||| |||||||| | |||||||||||| |||||||||||   | |||||||||||||||||| |||||| ||||||||    
T  56581211 gcgttctaattttagtggtacgttaacctttaaaaattctcaaagtaaaaatagtataagttagtataaaggagtttataaaaag 56581127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 18291707 - 18291761
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    |||||||||||||||||||||||||  |||||||||| ||| |||||||||||||    
T  18291707 catcattgaatctagattggggaagagggtaggcccttcgatttcctacgtgaag 18291761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 56580981 - 56580930
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||||||||||||||| |||||||||||| || || |||||||||    
T  56580981 cattgaatctagattggggaagggggtaggccctccaacctcatacgtgaag 56580930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 15260873 - 15260813
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    |||||||||||||||  ||||||   |||||||||| |||||||| |||||||||||||||    
T  15260873 caatgagaaaaacacctagttgcaatccttgagtaagtgtatgaaggggtattttaaggaa 15260813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 17485682 - 17485623
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    ||||||||||| ||| | ||||| |||||||||||| |||||||||  |||||||||||||    
T  17485682 caatgagaaaagcacga-gttgcatcccttgagtaattgtatgaataagtattttaaggaa 17485623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 232; Significance: 1e-128; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 27046309 - 27046544
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27046309 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 27046408  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27046409 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 27046508  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||||||||    
T  27046509 ggaggtaggccctccgacttcctacgtgaagatgat 27046544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 17095381 - 17095146
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  17095381 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacacgttttaatcttagtggtgcattaaccttcaaagat 17095282  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| ||||||||| | ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17095281 tctcaaagcgccagtagtataagtgagtataaggaaattcataagaagccaaaaagccaaataaattccaagatctcatcactgaatctagattggggaa 17095182  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||| ||||    
T  17095181 ggaggtaggccctccgacttcctacgtgaaggtgat 17095146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 20236902 - 20237129
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20236902 caatgagaaaaacacaaagttgcttcccttgagtaaatgtataaataggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 20237001  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    ||||||||||||||||||||||||||||||||||||||||||        |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20237002 tctcaaagtgccagtagtataagttagtataagggagttcat--------aaaaagccaaattaattccaagatctcatcattgaatctagattggggaa 20237093  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||| ||||||||||||||    
T  20237094 ggaggtaggccctccgacttcatacgtgaagatgat 20237129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 21799443 - 21799209
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  21799443 caatgagaaaaacacaaagttgcttcccttgagtaagtgtatgaataggtaatttaaggaaacacgttttaatcttagtggtgcattaacctttaaaaat 21799344  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| ||||||||||||  ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  21799343 tctcaaagcgccagtagtataagtgagtataagggagaccataaaaagccaaaaagccaaat-aattccaagatctcatcactgaatctagattggggaa 21799245  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||| ||||    
T  21799244 ggaggtaggccctccgacttcctacgtgaaggtgat 21799209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 3 - 233
Target Start/End: Original strand, 3989529 - 3989759
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||| |||||||| |||| ||||||||| ||    
T  3989529 caatgagaaaaatacaaagttgcttcccttgagtaagtgtatgaataggtattttaaggaaatgcgttctaattttagtggtacattgacctttaaaaat 3989628  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||||   ||||||||||||||||||||| ||||| ||| ||||||||||||||||||  ||| |||| |  ||||||||||||||||||||||||    
T  3989629 tctcaaagtaaaagtagtataagttagtataagagagtttatataaagccaaaaagccaaattgatttcaaggttgcatcattgaatctagattggggaa 3989728  T
Q  203 ggaggtaggccctccgacttcctacgtgaag 233  Q
    || ||||||||||||||||||||||||||||    
T  3989729 gggggtaggccctccgacttcctacgtgaag 3989759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 19 - 235
Target Start/End: Complemental strand, 52939382 - 52939168
Alignment:
Q  19 aagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagattctcaaagtgccagta 118  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||| ||||| |||| ||| |||| | |||||||||||| |||||||||||   | ||    
T  52939382 aagttgcttccattgagtaaatgtatgaataggtattttaaggaaatgcgttctaattttaatggtacgttaacctttaaaaattctcaaagtaaaaata 52939283  T
Q  119 gtataagttagtataagggagttcataaaaagccaaaaagc-caaataaattccaagatctcatcattgaatctagattggggaaggaggtaggccctcc 217  Q
    |||||||||||||||| |||||| ||||||||||   ||||  ||||  ||| |||| |  ||| ||||||||||||||||||||||||||||||||||     
T  52939282 gtataagttagtataaaggagtttataaaaagcc---aagctaaaatttatttcaaggttgcattattgaatctagattggggaaggaggtaggccctct 52939186  T
Q  218 gacttcctacgtgaagat 235  Q
    ||||||||||||||||||    
T  52939185 gacttcctacgtgaagat 52939168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 17095117 - 17095057
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17095117 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 17095057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 27046573 - 27046633
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27046573 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 27046633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 20237157 - 20237217
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  20237157 catcattgaatctagatttgggaagggggtaggccctccgacttcctacgtgaagatgatg 20237217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 17095043 - 17094989
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  17095043 cattgaatctagattggggaaggaggtaggccctccgacctcctacgtgaagatg 17094989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 52939140 - 52939080
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||    
T  52939140 catcattgaatctagattggggaagggggtaggccctccaacctcctacgtgaagatgatg 52939080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 21799175 - 21799120
Alignment:
Q  184 ttgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21799175 ttgaaactagattggggaaggaggtaggccctccgacttcctacgtgaagacgatg 21799120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 27046647 - 27046701
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  27046647 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaagatg 27046701  T

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Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 20237231 - 20237284
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  20237231 cattgaatctagattggggaagg-ggtaggccctccgacttcctatgtgaagatg 20237284  T

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Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 21799106 - 21799056
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  21799106 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 21799056  T

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Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 52939066 - 52939015
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||||||||||||||| |||||||||||| || ||||||||||||    
T  52939066 cattgaatctagattggggaagggggtaggccctccaacctcctacgtgaag 52939015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 8652478 - 8652573
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaa 99  Q
    ||||||||||| ||||| ||||| ||||||||| || ||||||||| |||||||||||||| | | || |||| |||||||| | ||||| ||||||    
T  8652478 caatgagaaaagcacaa-gttgcatcccttgagcaagtgtatgaataggtattttaaggaagcacattctaattttagtggtacgttaacttttaaa 8652573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 19876455 - 19876329
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaa-cctttaaaga 101  Q
    ||||||||||| ||||  |||||  || |||||||| ||||||||| |||||||||||| ||| |||| |||| ||||||||  ||||| |||||||||     
T  19876455 caatgagaaaagcacatggttgcagcctttgagtaagtgtatgaataggtattttaagg-aacacgttctaattttagtggtaaattaaccctttaaag- 19876358  T
Q  102 ttctcaaagtgccagtagtataagttagt 130  Q
    || ||| |||   ||||||||||||||||    
T  19876357 ttttcagagtaaaagtagtataagttagt 19876329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 21785237 - 21785177
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    ||||||||||| |||  ||||||   |||||||||||||||||| | ||||||||||||||    
T  21785237 caatgagaaaagcacctagttgcaatccttgagtaaatgtatgagtaggtattttaaggaa 21785177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 228; Significance: 1e-126; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 21381527 - 21381762
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21381527 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 21381626  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21381627 tctcaaagtgccagtagtataagttagtataagggagctcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 21381726  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||||||||    
T  21381727 ggaggtaggccctccgacttcctacgtgaagatgat 21381762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 21099571 - 21099337
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21099571 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 21099472  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  21099471 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaag-caaataaattccaagatctcatcattgaatctagattggggaa 21099373  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||||||||    
T  21099372 ggaggtaggccctccgacttcctacgtgaagatgat 21099337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 23910876 - 23911111
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23910876 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataagtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 23910975  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23910976 tctcaaagtgccggtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 23911075  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||||||||    
T  23911076 ggaggtaggccctccgacttcctacgtgaagatgat 23911111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 21955509 - 21955736
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  21955509 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttttaatcttagtggtgcattaaccttttaagat 21955608  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    ||||||||||||||||||||||||||||||||||||||||||        |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21955609 tctcaaagtgccagtagtataagttagtataagggagttcat--------aaaaagccaaattaattccaagatctcatcattgaatctagattggggaa 21955700  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||||||||    
T  21955701 ggaggtaggccctccgacttcctacgtgaagatgat 21955736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 8323628 - 8323394
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||    
T  8323628 caataagaaaaacacaaagttgcttcccttgagtgaatgtatgaatgggtattttaaggaaacgcgttctaatcttagtggtacattaacctttaaaaat 8323529  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  8323528 tctcaaagcgccagtagtataagtgagtataagggagatcataaaaagccaaaaagccaaat-aattccaagatctcatcactgaatctagattggggaa 8323430  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||| ||||    
T  8323429 ggaggtaggccctccgacttcctacgtgaaggtgat 8323394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 8313902 - 8314136
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  8313902 caatgagaaaaacacaaagttgcttcccttgagtaagtgtatgaataggtaatttaaggaaacacgttttaatcttagtggtgcattaacctttaaaaat 8314001  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| ||||||||||||  ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  8314002 tctcaaagcgccagtagtataagtgagtataagggagaccataaaaagccaaaaagccaaat-aattccaagatctcatcactgaatctagattggggaa 8314100  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||| ||||    
T  8314101 ggaggtaggccctccgacttcctacgtgaaggtgat 8314136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 3 - 233
Target Start/End: Original strand, 17620176 - 17620405
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||| |||||||||| |||||||||||||||||| |||||||||  ||||||||||||||  ||||||||| |||||||| | || ||||||||| |     
T  17620176 caatgataaaaacacaa-gttgcttcccttgagtaagtgtatgaataagtattttaaggaaatacgttttaattttagtggtacgttgacctttaaaaac 17620274  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||||   |||||||||||||||||||| |||||| ||||||||||||| |||||||  |||| |||| |  ||| ||||||||||||||||||||    
T  17620275 tctcaaagtaaaagtagtataagttagtataaaggagtttataaaaagccaaatagccaaaataatttcaaggttgcattattgaatctagattggggaa 17620374  T
Q  203 ggaggtaggccctccgacttcctacgtgaag 233  Q
    |||||||||||||||||||||||||||||||    
T  17620375 ggaggtaggccctccgacttcctacgtgaag 17620405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 3 - 233
Target Start/End: Complemental strand, 20039768 - 20039539
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    ||||||||||||||||| | |||||||||||||||| ||||||||| |||||||||||||||  ||||||||| |||||||| | || ||||||||| |     
T  20039768 caatgagaaaaacacaa-gctgcttcccttgagtaagtgtatgaataggtattttaaggaaagacgttttaattttagtggtacgttgacctttaaaaac 20039670  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||||   |||||||||||||||||||| |||||| ||||||||||||| |||||||  |||| |||| |  ||| ||||||||||||||||||||    
T  20039669 tctcaaagtaaaagtagtataagttagtataaaggagtttataaaaagccaaatagccaaaataatttcaaggttgcattattgaatctagattggggaa 20039570  T
Q  203 ggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||| |||||||||||||||||||||||||    
T  20039569 ggaggcaggccctccgacttcctacgtgaag 20039539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 3 - 233
Target Start/End: Complemental strand, 21854559 - 21854330
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    ||||||||||||||||| |||||||||||||| ||| | ||||||| |||||||||||||||   |||||||| |||||||| | || ||||||||| |     
T  21854559 caatgagaaaaacacaa-gttgcttcccttgattaagtatatgaataggtattttaaggaaatatgttttaattttagtggtacgttgacctttaaaaac 21854461  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||||   |||||||||||||||||||| |||||| ||||||||||||| |||||||  |||| |||| |  ||| ||||||||||||||||||||    
T  21854460 tctcaaagtaaaagtagtataagttagtataaaggagtttataaaaagccaaatagccaaaataatttcaaggttgcattattgaatctagattggggaa 21854361  T
Q  203 ggaggtaggccctccgacttcctacgtgaag 233  Q
    |||||||||||||||||||||||||||||||    
T  21854360 ggaggtaggccctccgacttcctacgtgaag 21854330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 19365468 - 19365681
Alignment:
Q  19 aagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagattctcaaagtgccagta 118  Q
    |||||||||||||||||||||||||||||| |||||||||| |||| ||||| |||| |||||||| | |||||||||||| |||||||||||   | ||    
T  19365468 aagttgcttcccttgagtaaatgtatgaataggtattttaacgaaatgcgttctaattttagtggtactttaacctttaaaaattctcaaagtaaaaata 19365567  T
Q  119 gtataagttagtataagggagttcataaaaagccaaaaagc--caaataaattccaagatctcatcattgaatctagattggggaaggaggtaggccctc 216  Q
     ||||||||||||||| |||||| ||||||||||   ||||   |||   ||| |||| |  ||| |||||||||||||||||||||||||||||||||     
T  19365568 atataagttagtataaaggagtttataaaaagcc---aagcttaaaacttatttcaaggttgcattattgaatctagattggggaaggaggtaggccctt 19365664  T
Q  217 cgacttcctacgtgaag 233  Q
    |||||||||||||||||    
T  19365665 cgacttcctacgtgaag 19365681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 16419385 - 16419172
Alignment:
Q  19 aagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagattctcaaagtgccagta 118  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||| ||||| || | |||| ||||||| |||||||||||   | ||    
T  16419385 aagttgcttcccttgagtaaatgtatgaataggtattttaaggaaatgcgttctaattttagttgtacgttaatctttaaaaattctcaaagtaaaaata 16419286  T
Q  119 gtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaaggaggtaggccctccg 218  Q
     ||||||||||| ||| |||| | |||||||||| ||   | ||||  ||| |||| |  ||| ||||||||||||||||||||||||||||||||||||    
T  16419285 atataagttagtttaaaggagattataaaaagcc-aagctcaaaatttatttcaaggttgcattattgaatctagattggggaaggaggtaggccctccg 16419187  T
Q  219 acttcctacgtgaag 233  Q
    |||||||||||||||    
T  16419186 acttcctacgtgaag 16419172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 211
Target Start/End: Complemental strand, 21942205 - 21942015
Alignment:
Q  19 aagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagattctcaaagtgccagta 118  Q
    |||||||||||||||||||||||||||||| |||||| |||||||| ||||| |||| |||||||| | |||||||||||| |||||||||||   | |     
T  21942205 aagttgcttcccttgagtaaatgtatgaataggtattctaaggaaatgcgttctaattttagtggtacgttaacctttaaaaattctcaaagtaaaaatg 21942106  T
Q  119 gtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaaggaggtagg 211  Q
    |||||||||||||||| |||||| ||||||||||  ||    ||||  ||| |||| |  ||| |||||||||||||||||||||||||||||    
T  21942105 gtataagttagtataaaggagtttataaaaagcc--aagttaaaatttattgcaaggttgcattattgaatctagattggggaaggaggtagg 21942015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 17620435 - 17620495
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  17620435 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 17620495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 20039508 - 20039448
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20039508 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 20039448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 21099309 - 21099249
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21099309 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 21099249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 21104630 - 21104570
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21104630 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 21104570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 21381792 - 21381852
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21381792 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 21381852  T

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Target: chr8; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 21854299 - 21854239
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21854299 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 21854239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 20712003 - 20712111
Alignment:
Q  128 agtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa-ggaggtaggccctccgacttccta 226  Q
    ||||||||||||   ||||||||||||| |||||||  |||| ||||||  ||| |||||||||||||||| ||| || |||||||||||||||||||||    
T  20712003 agtataagggagcatataaaaagccaaatagccaaaataatttcaagattgcattattgaatctagattggagaaggggggtaggccctccgacttccta 20712102  T
Q  227 cgtgaagat 235  Q
    |||||||||    
T  20712103 cgtgaagat 20712111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 21940516 - 21940456
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  21940516 catcattgaatctagattggagaagggggtaggccctccgacttcctacgtgaagatgatg 21940456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 23911140 - 23911200
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23911140 catcgttgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 23911200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 20712146 - 20712199
Alignment:
Q  186 gaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20712146 gaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 20712199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 8323366 - 8323306
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8323366 catcgttgaaactagattggggaaggaggtaggccctccgacttcctacgtgaagacgatg 8323306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 16419138 - 16419078
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  16419138 catcatttaatctagattggggaagggggtaggccctccgacttcctacgtgacgatgatg 16419078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 20711902 - 20711993
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctt 95  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||||| |||||||||||||||  |||| |||| |||||||| |||| |||||    
T  20711902 caatgagataaacacaaa-ttgcttcccttgagtaagtgtatgaataggtattttaaggaaaaacgttctaattttagtggtacattgacctt 20711993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 21099235 - 21099181
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  21099235 cattgaatctagattggggaagggggtaggccctccgacttcctatgtgaagatg 21099181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 21104556 - 21104502
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  21104556 cattgaatctagattggggaagggggtaggccctccgacttcctatgtgaagatg 21104502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 21381866 - 21381920
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  21381866 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaagatg 21381920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 23911214 - 23911268
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  23911214 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaagatg 23911268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 8323294 - 8323242
Alignment:
Q  180 atcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  8323294 atcattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 8323242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 17620512 - 17620560
Alignment:
Q  185 tgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  17620512 tgaatctagattggggaagggggtaggccctccgacttcctacgtgaag 17620560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 20039431 - 20039383
Alignment:
Q  185 tgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20039431 tgaatctagattggggaagggggtaggccctccgacttcctacgtgaag 20039383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 238
Target Start/End: Complemental strand, 21104702 - 21104658
Alignment:
Q  194 attggggaaggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  21104702 attggggaaggaggtaggccctccgacttcctacgtgaagatgat 21104658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 8314170 - 8314225
Alignment:
Q  184 ttgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  8314170 ttgaaactagattggggaaggaggtaggccctctgacttcctacgtgaagacgatg 8314225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 8314239 - 8314289
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  8314239 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 8314289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 14352643 - 14352589
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    |||| |||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  14352643 cattaaatctagattcgggaagggggtaggccctccgacttcctacgtgaagatg 14352589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 185 - 239
Target Start/End: Complemental strand, 14352711 - 14352657
Alignment:
Q  185 tgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||    
T  14352711 tgaatctagattgggaaagaaggtaggccctccgacttcctacgtgaaggtgatg 14352657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 16419063 - 16419012
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||||||||||||||| |||||||||||| || ||||||||||||    
T  16419063 cattgaatctagattggggaagggggtaggccctccaacctcctacgtgaag 16419012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 20712213 - 20712264
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||||||||||||||| |||| ||||||||||||| |||||||||    
T  20712213 cattgaatctagattggggaagggggtaagccctccgacttcatacgtgaag 20712264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 21940442 - 21940391
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||||||||||||||| |||||||||||| || ||||||||||||    
T  21940442 cattgaatctagattggggaagggggtaggccctccaacctcctacgtgaag 21940391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 20375223 - 20375317
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaa 99  Q
    ||||||||||| ||||| ||||| ||||||||| || ||||||||| |||||||||||| | | |||| |||| ||||||||  |||||||||||||    
T  20375223 caatgagaaaagcacaa-gttgcatcccttgagcaagtgtatgaataggtattttaagg-agcacgttctaattttagtggtaaattaacctttaaa 20375317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 217
Target Start/End: Original strand, 21955766 - 21955804
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctcc 217  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  21955766 catcattgaatctagattggggaagggggtaggccctcc 21955804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 20001748 - 20001808
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    |||||||||||||||  ||||||   |||||||||| ||||||||| ||||||||||||||    
T  20001748 caatgagaaaaacacctagttgcaatccttgagtaagtgtatgaataggtattttaaggaa 20001808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 19766978 - 19767038
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    ||||||||||| |||  ||||||   |||||||||| ||||||||| ||||||||||||||    
T  19766978 caatgagaaaagcacctagttgcaatccttgagtaagtgtatgaataggtattttaaggaa 19767038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 22101845 - 22101905
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    |||||||||||||||   |||||   |||||||||| ||||||||| ||||||||||||||    
T  22101845 caatgagaaaaacacctggttgcaatccttgagtaagtgtatgaataggtattttaaggaa 22101905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 22369392 - 22369452
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    ||||||||||| |||  ||||||   |||||||||| ||||||||| ||||||||||||||    
T  22369392 caatgagaaaagcacctagttgcaatccttgagtaagtgtatgaataggtattttaaggaa 22369452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 23674980 - 23675040
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    |||||||||||||||  ||||||   |||||||| | ||||||||| ||||||||||||||    
T  23674980 caatgagaaaaacacctagttgcaatccttgagtgagtgtatgaataggtattttaaggaa 23675040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 228; Significance: 1e-126; HSPs: 84)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 7599790 - 7600025
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7599790 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 7599889  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7599890 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 7599989  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||| ||||    
T  7599990 ggaggtaggccctccgacttcctacgtgaaggtgat 7600025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 9361749 - 9361514
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9361749 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 9361650  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9361649 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaattaattccaagatctcatcattgaatctagattggggaa 9361550  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||| ||||||||    
T  9361549 ggaggtaggccctccgacttcctacgtaaagatgat 9361514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 10603252 - 10603017
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10603252 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttttaatcttagtggtacattaacctttaaagat 10603153  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    ||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10603152 tctcaaagtgcaagtagtataagtgagtataagggaattcataaaaagccaaaaagtcaaataaattccaagatctcatcattgaatctagattggggaa 10603053  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||||||||    
T  10603052 ggaggtaggccctccgacttcctacgtgaagatgat 10603017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 6814304 - 6814539
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  6814304 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttctaatcttagtggtgcattaacctttaaagat 6814403  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6814404 tctcaaagcgccagtagtataagtgagtataagggagaccataaaaagccaaaaagccaaataaattccaagatctcatcactgaatctagattggggaa 6814503  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||| ||||    
T  6814504 ggaggtaggccctccgacttcctacgtgaaggtgat 6814539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 15557722 - 15557487
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15557722 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacacgttttaatcttagtggtgcattaacctttaaagat 15557623  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| ||||||||| | ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  15557622 tctcaaagcgccagtagtataagtgagtataaggaaattcataagaagccaaaaagccaaataaattccaagatctcatcactgaatctagattggggaa 15557523  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||| ||||    
T  15557522 ggaggtaggccctccgacttcctacgtgaaggtgat 15557487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 12187855 - 12187621
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  12187855 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacacgttttaatcttagtggtgcattaacctttaaagat 12187756  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  12187755 tctcaaagcgccagtagtataagtgagtataagggagatcataaaaagccaaaaagccaaat-aattccaagatctcatcactgaatctagattggggaa 12187657  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||| ||||||||||||||| ||||    
T  12187656 ggaggtaggccctccaacttcctacgtgaaggtgat 12187621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 12194269 - 12194035
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  12194269 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacacattttaatcttagtggtgcattaacctttaaagat 12194170  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  12194169 tctcaaagcgccagtagtataagtgagtataagggagatcataaaaagccaaaaagccaaat-aattccaagatctcatcactgaatctagattggggaa 12194071  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||| ||||||||||||||| ||||    
T  12194070 ggaggtaggccctccaacttcctacgtgaaggtgat 12194035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 11946850 - 11947077
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  11946850 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttttaatcttagcggtgcattaacctttaaagat 11946949  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||||| ||||||||||||||||||||||||||||| |        ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11946950 tctcaaagtgtcagtagtataagttagtataagggagttcgt--------aaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 11947041  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||||||||    
T  11947042 ggaggtaggccctccgacttcctacgtgaagatgat 11947077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 37941814 - 37942048
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||| ||    
T  37941814 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaagaaaacgcgttctaatcttagtggtgcattaacctttaaaaat 37941913  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||||    
T  37941914 tctcaaagcgccagtagtataagtgagtataagggagatcataaaaagccaaaaagccaaat-aatttcaagatctcatcactgaatctagattggggaa 37942012  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||| ||||    
T  37942013 ggaggtaggccctccgacttcctacgtgaaggtgat 37942048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 3 - 239
Target Start/End: Original strand, 15644524 - 15644759
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||| ||    
T  15644524 caatgagaaaaacacaaagttgcttcccttgagtaagtgtatgaataggtaatttaaggaaacacgttttaatcttagtggtgcattaacctttaaaaat 15644623  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| ||||||||||||  ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  15644624 tctcaaagcgccagtagtataagtgagtataagggagaccataaaaagccaaaaagccaaat-aattccaagatctcatcactgaatctagattggggaa 15644722  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||||||||| ||||    
T  15644723 ggaggtaggccctccgacttcctacgtgaagacgatg 15644759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 3 - 239
Target Start/End: Complemental strand, 16374257 - 16374022
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| | || |||||||||||||||||||||||||||| ||    
T  16374257 caatgagaaaaacacaaagttgcttcccttgagtgaatgtatgaataggtattttaaggaaacacattctaatcttagtggtgcattaacctttaaaaat 16374158  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  16374157 tctcaaagcgccagtagtataagtgagtataagggagatcataaaaagccaaaaagccaaat-aattccaagatctcatcactgaatctagattggggaa 16374059  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||||||||| ||||    
T  16374058 ggaggtaggccctccgacttcctacgtgaagacgatg 16374022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 10146447 - 10146681
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | || |||||||||||||||||||||||||||| ||    
T  10146447 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacacattctaatcttagtggtgcattaacctttaaaaat 10146546  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||    
T  10146547 tctcaaagcgccagtagtataagtgagtataagggagatcataaaaagccaaaaagccaaat-aattccaaggtctcatcactgaatctagattggggaa 10146645  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||| ||||    
T  10146646 ggaggtaggccctccgacttcctacgtgaaggtgat 10146681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 10160952 - 10160718
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| | || |||||||||||||||||||||||||||| ||    
T  10160952 caatgagaaaaacacaaagttgcttcccttgagtaaatgaatgaataggtattttaaggaaacacattctaatcttagtggtgcattaacctttaaaaat 10160853  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||    
T  10160852 tctcaaagcgccagtagtataagtgagtataagggagatcataaaaagccaaaaagccaaat-aattccaaggtctcatcactgaatctagattggggaa 10160754  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||| ||||    
T  10160753 ggaggtaggccctccgacttcctacgtgaaggtgat 10160718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 13188197 - 13187963
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | || |||||||||||||||||||||||||||| ||    
T  13188197 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacacattctaatcttagtggtgcattaacctttaaaaat 13188098  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||  ||||||||| |||||||| ||||||||||||||||||    
T  13188097 tctcaaagcgccagtagtataagtgagtataagggagatcataaaaagccaaaaagccaaa-caattccaaggtctcatcactgaatctagattggggaa 13187999  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||| ||||    
T  13187998 ggaggtaggccctccgacttcctacgtgaaggtgat 13187963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 62 - 238
Target Start/End: Complemental strand, 16449479 - 16449303
Alignment:
Q  62 aaacgcgttttaatcttagtggtgcattaacctttaaagattctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagcca 161  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16449479 aaacgcgttttaatcttagtggtacattaacctttaaagattctcaaagtgccagtagtataagttagtataagggagtgcataaaaagccaaaaagcca 16449380  T
Q  162 aataaattccaagatctcatcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16449379 aataaattccaagatctcatcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgat 16449303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 3 - 217
Target Start/End: Original strand, 4370124 - 4370338
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||| |||||||| | || ||||||||| ||    
T  4370124 caatgagaaaaacacaaagttgcttcccttgagtaagtgtatgaataggtattttaaggaaatgcgttctaattttagtggtacgttgacctttaaaaat 4370223  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||||   ||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||| |||| |  ||||||||||||||||||||||||    
T  4370224 tctcaaagtaaaagtagtataagttagtataagagagtttataaaaagccaaaaagccaaattgatttcaaggttgcatcattgaatctagattggggaa 4370323  T
Q  203 ggaggtaggccctcc 217  Q
    || ||||||||||||    
T  4370324 gggggtaggccctcc 4370338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 3 - 233
Target Start/End: Original strand, 13097133 - 13097362
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||  ||||||||||||||   |||||||| |||||||| | || ||||| ||| |     
T  13097133 caatgagaaaaacacaa-gttgcttcccttgagtaagtgtatgaataagtattttaaggaaatatgttttaattttagtggtacgttgaccttcaaaaac 13097231  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||||   |||||||||||||||||||| |||| | ||||||||||||| |||||||  |||| |||| |  ||| ||||||||||||||||||||    
T  13097232 tctcaaagtaaaagtagtataagttagtataaaggagattataaaaagccaaatagccaaaataatttcaaggttgcattattgaatctagattggggaa 13097331  T
Q  203 ggaggtaggccctccgacttcctacgtgaag 233  Q
    |||||||||||||||||||||||||||||||    
T  13097332 ggaggtaggccctccgacttcctacgtgaag 13097362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 3 - 233
Target Start/End: Complemental strand, 13089588 - 13089359
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||    ||||||| |||||||| | || ||||| ||| |     
T  13089588 caatgagaaaaacacaa-gttgcttcccttgagtaagtgtatgaataggtattttaaggaaatattttttaattttagtggtacgttgaccttgaaaaac 13089490  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    | |||||||   |||||||||||||||||||| |||| | ||||||||||||| |||||||  |||| |||| |  ||| ||||||||||||||||||||    
T  13089489 tgtcaaagtaaaagtagtataagttagtataaaggagattataaaaagccaaatagccaaaataatttcaaggttgcattattgaatctagattggggaa 13089390  T
Q  203 ggaggtaggccctccgacttcctacgtgaag 233  Q
    |||||||||||||||||||||||||||||||    
T  13089389 ggaggtaggccctccgacttcctacgtgaag 13089359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 12160970 - 12160757
Alignment:
Q  19 aagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagattctcaaagtgccagta 118  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||| ||||||||   |||||||||||| |||||||||||   | ||    
T  12160970 aagttgcttcccttgagtaaatgtatgaataggtattttaaggaaatgcgttctaattttagtggtatgttaacctttaaaaattctcaaagtaaaaata 12160871  T
Q  119 gtataagttagtataagggagttcataaaaagccaaaaagc--caaataaattccaagatctcatcattgaatctagattggggaaggaggtaggccctc 216  Q
    |||||||||||||||| |||||| ||||||||||   ||||   ||||  ||| |||| |  ||| ||||||||||||||||||||||||||||||||||    
T  12160870 gtataagttagtataaaggagtttataaaaagcc---aagctaaaaatttatttcaaggttgcattattgaatctagattggggaaggaggtaggccctc 12160774  T
Q  217 cgacttcctacgtgaag 233  Q
    || ||||||||||||||    
T  12160773 cgtcttcctacgtgaag 12160757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 22165091 - 22164981
Alignment:
Q  3 caatgagaaaaacacaaa-gttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaaga 101  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  22165091 caatgagaaaaacacaaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacacgttttaatcttagtggtgcattaacctttaaaga 22164992  T
Q  102 ttctcaaagtg 112  Q
    |||||||||||    
T  22164991 ttctcaaagtg 22164981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 232
Target Start/End: Complemental strand, 10547637 - 10547420
Alignment:
Q  19 aagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagattctcaaagtgccagta 118  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||| ||||| || | |||||||||||| |||||||||||   | ||    
T  10547637 aagttgcttcccttgagtaaatgtatgaataggtattttaaggaaatgcgttctaattttagtagtacgttaacctttaaaaattctcaaagtaaaaata 10547538  T
Q  119 gtataagttagtataagggagttcataaaaagccaaa---aagccaaata-aattccaagatctcatcattgaatctagattggggaaggaggtaggccc 214  Q
    |||||||||||||||| |||||| |||||||   |||   |||||||| |  ||| |||| |  ||| ||||||| |||||||||||| ||| |||||||    
T  10547537 gtataagttagtataaaggagtttataaaaaaaaaaagccaagccaaaaattatttcaaggttgcattattgaatttagattggggaaagagataggccc 10547438  T
Q  215 tccgacttcctacgtgaa 232  Q
    ||||||||||||||||||    
T  10547437 tccgacttcctacgtgaa 10547420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 11866233 - 11866442
Alignment:
Q  19 aagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagattctcaaagtgccagta 118  Q
    |||||||||||||||||||||||||||||| || |||||||||||| | ||| |||| ||||||||   |||||||||||| |||||||||||   | ||    
T  11866233 aagttgcttcccttgagtaaatgtatgaataggcattttaaggaaatgtgttctaattttagtggtatgttaacctttaaaaattctcaaagtaaaaata 11866332  T
Q  119 gtataagttagtataagggagttcataaaaagccaaaaagc--caaataaattccaagatctcatcattgaatctagattggggaaggaggtaggccctc 216  Q
     ||||||||||  ||| |||    ||||||||||   ||||   ||||  ||| |||| |  ||| ||||||||||||||||||||||||||||||||||    
T  11866333 atataagttagcgtaaagga----ataaaaagcc---aagcttaaaatttatttcaaggttgcattattgaatctagattggggaaggaggtaggccctc 11866425  T
Q  217 cgacttcctacgtgaag 233  Q
    |||||||||||||||||    
T  11866426 cgacttcctacgtgaag 11866442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 15557458 - 15557398
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15557458 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 15557398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 9361486 - 9361426
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9361486 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 9361426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 10602988 - 10602928
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10602988 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 10602928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 11947106 - 11947166
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11947106 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 11947166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 13089329 - 13089269
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13089329 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 13089269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 13097392 - 13097452
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13097392 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 13097452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 16449275 - 16449215
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16449275 catcattgaatctagattggggaaggcggtaggccctccgacttcctacgtgaagatgatg 16449215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 14349061 - 14349004
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  14349061 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatg 14349004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 13690289 - 13690345
Alignment:
Q  181 tcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatga 237  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13690289 tcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatga 13690345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 179 - 233
Target Start/End: Original strand, 3278852 - 3278906
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3278852 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaag 3278906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 3278939 - 3278993
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  3278939 cattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatg 3278993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 16449201 - 16449147
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16449201 cattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatg 16449147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 179 - 236
Target Start/End: Complemental strand, 3246046 - 3245989
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  3246046 catcattgaatctagattggagaagggggtaggccctccgacttcctacgtgaagatg 3245989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 3246131 - 3246071
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  3246131 catcactgaatctagattggggaaggaggtaggccctccgacttcctacatgaaggtgatg 3246071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 7600054 - 7600114
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7600054 catcgttgaaactagattggggaaggaggtaggccctccgacttcctacgtgaagacgatg 7600114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 12160723 - 12160663
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  12160723 catcattgaatctagattggggaagagggtaggccctccgacttcctacgcgaagatgatg 12160663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 20157396 - 20157301
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaa 99  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||| |||| ||||||||||| | || |||| |||||||| | ||||| ||||||    
T  20157396 caatgagaaaagcacaa-gttgcttcccttgagtaaatgtatgaataggtactttaaggaaacacattctaattttagtggtacgttaacgtttaaa 20157301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 4382515 - 4382566
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4382515 cattgaatctagattggggaagggggtaggccctccgacttcctacgtgaag 4382566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 10160685 - 10160630
Alignment:
Q  184 ttgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  10160685 ttgaaactagattggggaaggaggtaggccctccgacttcctacgtgaagacgatg 10160630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 12187588 - 12187533
Alignment:
Q  184 ttgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12187588 ttgaaactagattggggaaggaggtaggccctccgacttcctacgtgaagacgatg 12187533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 12194002 - 12193947
Alignment:
Q  184 ttgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12194002 ttgaaactagattggggaaggaggtaggccctccgacttcctacgtgaagacgatg 12193947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 37942081 - 37942136
Alignment:
Q  184 ttgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37942081 ttgaaactagattggggaaggaggtaggccctccgacttcctacgtgaagacgatg 37942136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 9361412 - 9361358
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  9361412 cattgaatctagattggggaagggggtaggccctccgacttcctatgtgaagatg 9361358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 10146714 - 10146764
Alignment:
Q  184 ttgaatctagattggggaaggaggtaggccctccgacttcctacgtgaaga 234  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10146714 ttgaaactagattggggaaggaggtaggccctccgacttcctacgtgaaga 10146764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 10602914 - 10602860
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  10602914 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaagatg 10602860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 11947180 - 11947234
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  11947180 cattgaatctagattggggaagggggtaggccctccgacttcctatgtgaagatg 11947234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 15557384 - 15557330
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  15557384 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaagatg 15557330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 12187521 - 12187469
Alignment:
Q  180 atcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  12187521 atcattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 12187469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 12193935 - 12193883
Alignment:
Q  180 atcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  12193935 atcattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 12193883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 16374010 - 16373958
Alignment:
Q  180 atcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  16374010 atcattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 16373958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 4382448 - 4382499
Alignment:
Q  186 gaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatga 237  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  4382448 gaatctagattggggaagggggtaggccctccgacttcctacgagaagatga 4382499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 13187929 - 13187874
Alignment:
Q  184 ttgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  13187929 ttgaaactagattggggaaggaggtaggcccttcgacttcctacgtgaagacgatg 13187874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 6814641 - 6814691
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  6814641 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 6814691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 7600128 - 7600178
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  7600128 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 7600178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 10146783 - 10146833
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  10146783 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 10146833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 10547385 - 10547331
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    |||||||||||||||||||||||||| |||||||||||| || ||||||||||||    
T  10547385 catcattgaatctagattggggaagggggtaggccctccaacctcctacgtgaag 10547331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 15644773 - 15644823
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  15644773 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 15644823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 37942150 - 37942200
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  37942150 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 37942200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 16655165 - 16655206
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtat 44  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  16655165 caatgagaaaaacacaaagttgcttcccttgagtaaatgtat 16655206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 10160618 - 10160566
Alignment:
Q  180 atcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||||| |||||||||||| || |||||||||||    
T  10160618 atcattgaatctagattggggaagggggtaggccctccaacctcctacgtgaa 10160566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 12160646 - 12160594
Alignment:
Q  184 ttgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||| |||||||||||| || |||||||||||||||    
T  12160646 ttgaatctagattggggaagggggtaggccctccaacctcctacgtgaagatg 12160594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 13097469 - 13097517
Alignment:
Q  185 tgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  13097469 tgaatctagattggggaagggggtaggccctccgacttcctaggtgaag 13097517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 13187862 - 13187810
Alignment:
Q  180 atcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    |||||||||||||||| |||||||| ||||||||||||||| |||||||||||    
T  13187862 atcattgaatctagatcggggaagggggtaggccctccgacctcctacgtgaa 13187810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 13690361 - 13690413
Alignment:
Q  182 cattgaatctagattggggaaggagg-taggccctccgacttcctacgtgaag 233  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  13690361 cattgaatctagattggggaaggggggtaggccctccgacttcctacgtgaag 13690413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 6814572 - 6814627
Alignment:
Q  184 ttgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||| |||||||| |||||||||||||||||||||||||||| ||||||| ||||    
T  6814572 ttgaaactagattgaggaaggaggtaggccctccgacttcctatgtgaagacgatg 6814627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 11866476 - 11866517
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgac 220  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  11866476 catcattgaatctagattggggaagggggtaggccctccgac 11866517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 16449513 - 16449477
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaa 39  Q
    |||||||||||||||||||||||||||||||||||||    
T  16449513 caatgagaaaaacacaaagttgcttcccttgagtaaa 16449477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 17387192 - 17387287
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaa 99  Q
    ||||||||||| ||||| ||||| |||||| || || ||||||||| ||||||||||| || | |||| |||| |||||||| | ||||||||||||    
T  17387192 caatgagaaaagcacaa-gttgcatcccttaagcaagtgtatgaataggtattttaagaaagcacgttctaattttagtggtacgttaacctttaaa 17387287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 99
Target Start/End: Original strand, 13600426 - 13600520
Alignment:
Q  4 aatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaa 99  Q
    |||||||||| ||||||||||| |||||| || || ||||||||| |||||||||||| | | |||| |||| |||| ||| |||||||| |||||    
T  13600426 aatgagaaaagcacaaagttgcatcccttaagcaagtgtatgaataggtattttaagg-agcacgttataattttagaggtacattaacccttaaa 13600520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 1992152 - 1992246
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaa 99  Q
    ||||||||||| ||||| ||||| ||| ||||| || ||||||||| |||||||||||| | | |||| |||| |||||||| |||||||| |||||    
T  1992152 caatgagaaaatcacaa-gttgcatcctttgagcaattgtatgaataggtattttaagg-agcacgttctaattttagtggtacattaacccttaaa 1992246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 13089252 - 13089204
Alignment:
Q  185 tgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||||||||  || |||||||||||||||| |||||||||||    
T  13089252 tgaatctagattgggggggggggtaggccctccgactccctacgtgaag 13089204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 13136955 - 13136895
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    |||||||||||||||  ||||||   |||||||||| ||||||||| ||||||||||||||    
T  13136955 caatgagaaaaacacctagttgcaatccttgagtaagtgtatgaataggtattttaaggaa 13136895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 13690091 - 13690133
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatga 46  Q
    |||||||||| |||||| ||||||||||||||||||||||||||    
T  13690091 caatgagaaatacacaa-gttgcttcccttgagtaaatgtatga 13690133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 13694336 - 13694378
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatga 46  Q
    |||||||||| |||||| ||||||||||||||||||||||||||    
T  13694336 caatgagaaatacacaa-gttgcttcccttgagtaaatgtatga 13694378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 3339992 - 3339932
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    ||||||||||| |||  ||||||   |||||||||| ||||||||| ||||||||||||||    
T  3339992 caatgagaaaagcacctagttgcaatccttgagtaagtgtatgaataggtattttaaggaa 3339932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 12777301 - 12777241
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    ||||||||||| |||  ||||||   |||||||||| ||||||||| ||||||||||||||    
T  12777301 caatgagaaaagcacctagttgcaatccttgagtaagtgtatgaataggtattttaaggaa 12777241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 13064393 - 13064453
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    ||||||||||| |||  ||||||   |||||||||||||||||| | ||||||||||||||    
T  13064393 caatgagaaaagcacctagttgcaatccttgagtaaatgtatgagtaggtattttaaggaa 13064453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 15629751 - 15629691
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    |||||||||||||||   |||||   |||||||||| ||||||||| ||||||||||||||    
T  15629751 caatgagaaaaacacctggttgcaatccttgagtaagtgtatgaataggtattttaaggaa 15629691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 15946061 - 15946121
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    |||||||||||||||  ||||||   |||||||||| ||||||| | ||||||||||||||    
T  15946061 caatgagaaaaacacctagttgcaatccttgagtaagtgtatgagtaggtattttaaggaa 15946121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 20560457 - 20560517
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    |||||||||||||||  ||||||   |||||||||| ||||||| | ||||||||||||||    
T  20560457 caatgagaaaaacacctagttgcaatccttgagtaagtgtatgagtaggtattttaaggaa 20560517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 20562765 - 20562825
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    |||||||||||||||  ||||||   |||||||||| ||||||| | ||||||||||||||    
T  20562765 caatgagaaaaacacctagttgcaatccttgagtaagtgtatgagtaggtattttaaggaa 20562825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 20565073 - 20565133
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    |||||||||||||||  ||||||   |||||||||| ||||||| | ||||||||||||||    
T  20565073 caatgagaaaaacacctagttgcaatccttgagtaagtgtatgagtaggtattttaaggaa 20565133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 220; Significance: 1e-121; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 122804 - 123038
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  122804 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttttaatcttagtggtgcattaaccttgaaagat 122903  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  122904 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 123003  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
     |||||||||||||||||||||||||||||||||||    
T  123004 -gaggtaggccctccgacttcctacgtgaagatgat 123038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 123068 - 123128
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  123068 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 123128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 123142 - 123196
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||| ||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  123142 cattggatctagattggggaagggggtaggccctccgacctcctacgtgaagatg 123196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 220; Significance: 1e-121; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 14550531 - 14550766
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  14550531 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttttaatcctagcggtgcattaacctttaaagat 14550630  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14550631 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 14550730  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||| ||||||||||    
T  14550731 ggaggtaggccctccgacttcctacatgaagatgat 14550766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 23514502 - 23514737
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23514502 caatgagaaaaacaaaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 23514601  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23514602 tctcaaagtgccagtagtataagttagtataagggagttgataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 23514701  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||| ||||||||||||||||||||||||||||||||    
T  23514702 ggacgtaggccctccgacttcctacgtgaagatgat 23514737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 8717300 - 8717535
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8717300 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 8717399  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    ||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8717400 tctcaaaatgccagtagtataagtcagtataagggagttcatgaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagactggggaa 8717499  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||||||||    
T  8717500 ggaggtaggccctccgacttcctacgtgaagatgat 8717535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 539545 - 539310
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  539545 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgattaggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 539446  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  539445 tctcaaagtgccggtagtataagttagtataagggagttcataaaaagccaaaaagccaaattaattccaagatctcatcattgaatctagattggggaa 539346  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||  ||||||||    
T  539345 ggaggtaggccctccgacttcctacgaaaagatgat 539310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 3 - 239
Target Start/End: Complemental strand, 18594046 - 18593810
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  18594046 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttctaatcttagtggtgcattaacctttaaagac 18593947  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  18593946 tctcaaagcgccagtagtataagtgagtataagggagatcataaaaagccaaaaagccaaataaattccaagatctcatcgctgaatctagattggggaa 18593847  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||||||||| ||||    
T  18593846 ggaggtaggccctccgacttcctacgtgaagacgatg 18593810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 3 - 239
Target Start/End: Original strand, 18617638 - 18617874
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  18617638 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttctaatcttagtggtgcattaacctttaaagac 18617737  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  18617738 tctcaaagcgccagtagtataagtgagtataagggagatcataaaaagccaaaaagccaaataaattccaagatctcatcgctgaatctagattggggaa 18617837  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||||||||| ||||    
T  18617838 ggaggtaggccctccgacttcctacgtgaagacgatg 18617874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 13673291 - 13673526
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  13673291 caatgagaaatacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttctaatcttagtggtgcattaacctttaaagac 13673390  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||    
T  13673391 tctcaaagcgccagtagtataagtgagtataagggagatcataaaaagccaaaaagccaaataaattccaagatctcatcgccgaatctagattggggaa 13673490  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||| ||||    
T  13673491 ggaggtaggccctccgacttcctacgtgaaggtgat 13673526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 8 - 238
Target Start/End: Original strand, 9582340 - 9582563
Alignment:
Q  8 agaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagattctca 107  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  9582340 agaaaaacacaaatttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttttaatcttagtggtgcattaacatttaaagattctca 9582439  T
Q  108 aagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattcc-aagatctcatcattgaatctagattggggaaggag 206  Q
    |||||||||||||||||||||||||||||||||||||        ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  9582440 aagtgccagtagtataagttagtataagggagttcat--------aaaaagccaaataaattccaaagatctaatcattgaatctagattggggaaggag 9582531  T
Q  207 gtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||||    
T  9582532 gtaggccctccgacttcctacgtgaagatgat 9582563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 3 - 141
Target Start/End: Complemental strand, 16150262 - 16150124
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  16150262 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacacgttttaatcttagtggtgcattaacctttaaagat 16150163  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagtt 141  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16150162 tctcaaagtgccagtagtataagttagtataagggagtt 16150124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 10432523 - 10432292
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||  ||||||||| |||| | ||| || | |||||||| | || ||||||||| ||    
T  10432523 caatgagaaaaacacaa-gttgcttcccttgagtaagtgtatgaataagtattttaacgaaatgtgttctagttttagtggtacgttgacctttaaaaat 10432425  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||||   ||||||||||||||||||||||| ||| ||||||||| ||| ||||||||  ||| |||| |  ||| ||||||||||||||||||||    
T  10432424 tctcaaagtaaaagtagtataagttagtataagggggtttataaaaagcaaaatagccaaattgatttcaaggttgcattattgaatctagattggggaa 10432325  T
Q  203 ggaggtaggccctccgacttcctacgtgaagat 235  Q
    |||||||||||||||||||||||||||||||||    
T  10432324 ggaggtaggccctccgacttcctacgtgaagat 10432292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 3 - 239
Target Start/End: Original strand, 12566446 - 12566681
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||  |||||||||| ||| ||||| ||||||||| ||| | || ||||||| | ||    
T  12566446 caatgagaaaaacacaa-gttgcttcccttgagtaagtgtatgaatatgtattttaagaaaatgcgttctaatcttagcggtacgttgacctttagaaat 12566544  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    ||||||| |   |||||||||||||||||||||||| || ||||||| ||||| ||||||||  ||| |||| |  ||||||||||||||||||| ||||    
T  12566545 tctcaaactaaaagtagtataagttagtataagggaatttataaaaaaccaaatagccaaattgatttcaaggttgcatcattgaatctagattgtggaa 12566644  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    || |||||||||||| || |||||||||||| |||||    
T  12566645 gggggtaggccctccaacatcctacgtgaaggtgatg 12566681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 137 - 238
Target Start/End: Complemental strand, 16120491 - 16120390
Alignment:
Q  137 gagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16120491 gagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 16120392  T
Q  237 at 238  Q
    ||    
T  16120391 at 16120390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 235
Target Start/End: Original strand, 16531543 - 16531758
Alignment:
Q  19 aagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagattctcaaagtgccagta 118  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||| |||||||| | |||||||||||| |||||||||||   | ||    
T  16531543 aagttgcttcccttgagtaaatgtatgaataggtattttaaggaaatgcgttctaattttagtggtacgttaacctttaaaaattctcaaagtaaaaata 16531642  T
Q  119 gtataagttagtataagggagttcataaaaagccaaaaagc--caaataaattccaagatctcatcattgaatctagattggggaaggaggtaggccctc 216  Q
     |||||||||| |||| |||||| ||||||| ||   ||||   ||||  ||| |||| |  ||| ||||||||||||||||||||||||||||||||||    
T  16531643 atataagttagcataaaggagtttataaaaatcc---aagcttaaaatttatttcaaggttgcattattgaatctagattggggaaggaggtaggccctc 16531739  T
Q  217 cgacttcctacgtgaagat 235  Q
    |||||||||||||||||||    
T  16531740 cgacttcctacgtgaagat 16531758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 235
Target Start/End: Complemental strand, 16634119 - 16633904
Alignment:
Q  19 aagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagattctcaaagtgccagta 118  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||| |||||||| | |||||||||||| |||||||||||   | ||    
T  16634119 aagttgcttcccttgagtaaatgtatgaataggtattttaaggaaatgcgttctaattttagtggtacgttaacctttaaaaattctcaaagtaaaaata 16634020  T
Q  119 gtataagttagtataagggagttcataaaaagccaaaaagc--caaataaattccaagatctcatcattgaatctagattggggaaggaggtaggccctc 216  Q
     |||||||||| |||| |||||| ||||||| ||   ||||   ||||  ||| |||| |  ||| ||||||||||||||||||||||||||||||||||    
T  16634019 atataagttagcataaaggagtttataaaaatcc---aagcttaaaatttatttcaaggttgcattattgaatctagattggggaaggaggtaggccctc 16633923  T
Q  217 cgacttcctacgtgaagat 235  Q
    |||||||||||||||||||    
T  16633922 cgacttcctacgtgaagat 16633904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 18 - 235
Target Start/End: Complemental strand, 16466382 - 16466164
Alignment:
Q  18 aaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagattctcaaagt--gcca 115  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||| ||||| |||| |||||||| |||||||||| ||  |||||||||||     |    
T  16466382 aaagttgcttcccttgagtaaatgtataaataggtattttaaggaaatgcgttctaattttagtggtacattaaccttaaagaattctcaaagtaaaaaa 16466283  T
Q  116 gtagtataagttagtataagggagttcataaaaagccaaaaagc--caaataaattccaagatctcatcattgaatctagattggggaaggaggtaggcc 213  Q
     |||||||||||||||||| ||||| |||||||||||   ||||   ||||  ||| |||| |  ||| |||||||||||||||||||||||||||||||    
T  16466282 atagtataagttagtataaaggagtgcataaaaagcc---aagcttaaaatttatttcaaggttgcattattgaatctagattggggaaggaggtaggcc 16466186  T
Q  214 ctccgacttcctacgtgaagat 235  Q
    ||||||||||||||||||||||    
T  16466185 ctccgacttcctacgtgaagat 16466164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 239
Target Start/End: Original strand, 13355670 - 13355887
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    ||||||||||||||||| |||||||||||||||||| ||||| ||| ||||||||||| ||| ||||| |||| |||||||| | || ||||||||| ||    
T  13355670 caatgagaaaaacacaa-gttgcttcccttgagtaagtgtataaataggtattttaagaaaatgcgttctaattttagtggtacgttgacctttaaaaat 13355768  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    ||||||         |||| |||  |||||||||||||| ||        ||||||||||||  ||| |||  |  ||||||||||||||||||||||||    
T  13355769 tctcaa---------agtaaaag-cagtataagggagtttat--------aaaaagccaaattgatttcaaagttgcatcattgaatctagattggggaa 13355850  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||||||||||||||||||||||||||||| |||||    
T  13355851 ggaggtaggccctccgacttcctacgtgaaggtgatg 13355887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 9582593 - 9582653
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9582593 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 9582653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 143 - 233
Target Start/End: Complemental strand, 12549450 - 12549360
Alignment:
Q  143 ataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||||| |||||||  |||| |||| |  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12549450 ataaaaagccaaatagccaaaataatttcaaggttgcattattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 12549360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 539282 - 539222
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  539282 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 539222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 8717564 - 8717624
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8717564 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 8717624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 10432259 - 10432199
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10432259 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 10432199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 11921821 - 11921761
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11921821 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 11921761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 14550797 - 14550857
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  14550797 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 14550857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 16120361 - 16120301
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16120361 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 16120301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 16466131 - 16466071
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16466131 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 16466071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 23514766 - 23514826
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23514766 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 23514826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 4312239 - 4312299
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  4312239 catcattgaatctagattggagaaggaggtaggccctccgacttcctacgtgaaggtgatg 4312299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 12549330 - 12549270
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  12549330 catcattgaatctagattggggaagggggtaggccctctgacttcctacgtgaagatgatg 12549270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 237
Target Start/End: Original strand, 13657555 - 13657611
Alignment:
Q  181 tcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatga 237  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13657555 tcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatga 13657611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 16531790 - 16531850
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  16531790 catcattgaatctagattggggaagagggtaggccctccgacttcctacgtgaagatgatg 16531850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 16633872 - 16633812
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  16633872 catcattgaatctagattggggaagagggtaggccctccgacttcctacgtgaagatgatg 16633812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 20107724 - 20107819
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaa 99  Q
    ||||||||||| ||||| |||||||||||||||||| |||||||||  ||||||||||||||| |||| |||| |||||||| | ||||||||||||    
T  20107724 caatgagaaaagcacaa-gttgcttcccttgagtaagtgtatgaataagtattttaaggaaacacgttctaattttagtggtacgttaacctttaaa 20107819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 185 - 239
Target Start/End: Original strand, 12566711 - 12566765
Alignment:
Q  185 tgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  12566711 tgaatctagattggggaaggaggtaggccctccgaattcctacgtgaagatgatg 12566765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 16120287 - 16120233
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16120287 cattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatg 16120233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 12566783 - 12566834
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12566783 cattgaatctagattggggaagggggtaggccctccgacttcctacgtgaag 12566834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 13657627 - 13657678
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13657627 cattgaatctagattggggaagggggtaggccctccgacttcctacgtgaag 13657678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 4312313 - 4312367
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  4312313 cattgaatctagattggggaagggggtaagccctccgacttcctacgtgaagatg 4312367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 8717638 - 8717692
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  8717638 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaagatg 8717692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 9582667 - 9582721
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  9582667 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaagatg 9582721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 14550871 - 14550925
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  14550871 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaagatg 14550925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 23514840 - 23514894
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  23514840 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaagatg 23514894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 539205 - 539157
Alignment:
Q  185 tgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  539205 tgaatctagattggggaagggggtaggccctccgacttcctacgtgaag 539157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 13673555 - 13673615
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||| ||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  13673555 catcgttgaaactagattggggaaggaggtaggccttccgacttcctacgtgaagacgatg 13673615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 13673629 - 13673679
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  13673629 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 13673679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 18593796 - 18593746
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  18593796 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 18593746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 18617888 - 18617938
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  18617888 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 18617938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 12549253 - 12549205
Alignment:
Q  185 tgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||    
T  12549253 tgaatctagattggggaacggggtaggccctccgacttcctacgtgaag 12549205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 11921747 - 11921696
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||||||||||||||| |||||||||||| || ||||||||||||    
T  11921747 cattgaatctagattggggaagggggtaggccctccaacctcctacgtgaag 11921696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 16466057 - 16466006
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||||||||||||||| |||||||||||| || ||||||||||||    
T  16466057 cattgaatctagattggggaagggggtaggccctccaacctcctacgtgaag 16466006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 16531865 - 16531916
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||||||||||||||| |||||||||||| || ||||||||||||    
T  16531865 cattgaatctagattggggaagggggtaggccctccaacctcctacgtgaag 16531916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 16633797 - 16633746
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||||||||||||||| |||||||||||| || ||||||||||||    
T  16633797 cattgaatctagattggggaagggggtaggccctccaacctcctacgtgaag 16633746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 13355911 - 13355952
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgac 220  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  13355911 catcattgaatctagattggggaagggggtaggccctccgac 13355952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 99
Target Start/End: Complemental strand, 48802611 - 48802539
Alignment:
Q  27 tcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaa 99  Q
    ||||||||| || ||||||||| |||||||||||||| | |||| |||| |||||||| | ||||||||||||    
T  48802611 tcccttgagcaagtgtatgaataggtattttaaggaagcacgttctaattttagtggtacgttaacctttaaa 48802539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 13657357 - 13657399
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatga 46  Q
    |||||||||| |||||| ||||||||||||||||||||||||||    
T  13657357 caatgagaaatacacaa-gttgcttcccttgagtaaatgtatga 13657399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 4312171 - 4312227
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaag 60  Q
    ||||||||||| ||| | ||||| |||||||||||| ||||||||| |||||||||||    
T  4312171 caatgagaaaagcacga-gttgcatcccttgagtaattgtatgaataggtattttaag 4312227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 211
Target Start/End: Complemental strand, 10432175 - 10432143
Alignment:
Q  179 catcattgaatctagattggggaaggaggtagg 211  Q
    |||||||||||||||||||||||||| ||||||    
T  10432175 catcattgaatctagattggggaagggggtagg 10432143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 15917546 - 15917486
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    ||||||||||| |||  ||||||   |||||||||| ||||||||| ||||||||||||||    
T  15917546 caatgagaaaagcacctagttgcaatccttgagtaagtgtatgaataggtattttaaggaa 15917486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 16326549 - 16326489
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    ||||||||||| |||  ||||||   |||||||||| ||||||||| ||||||||||||||    
T  16326549 caatgagaaaagcacctagttgcaatccttgagtaagtgtatgaataggtattttaaggaa 16326489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 18287054 - 18287114
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    |||||||||||||||   |||||   |||||||||| ||||||||| ||||||||||||||    
T  18287054 caatgagaaaaacacctggttgcaatccttgagtaagtgtatgaataggtattttaaggaa 18287114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 220; Significance: 1e-121; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 12396 - 12161
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12396 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 12297  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  12296 tctcaaagtgccagtagtataaattagtataagggagttcataaaaagccagaaagccaaattaattccaagatctcatcattgaatctagattggggaa 12197  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||||||||    
T  12196 ggaggtaggccctccgacttcctacgtgaagatgat 12161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 116978 - 117213
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  116978 caatgagaaaaacacaaagttgtttcccttgagtaaatgtatgaataggtattttaaggaaacacgttttaatcttagtggtgcattaacctttaaagat 117077  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  117078 tctcaaagtgtcagtagtataagttagtataagggagttcgtaaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 117177  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
     |||||||||||||||||||||||||||||||||||    
T  117178 agaggtaggccctccgacttcctacgtgaagatgat 117213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 22045440 - 22045205
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22045440 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttctaatcttagtggtgcattaacctttaaagat 22045341  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22045340 tctcaaagcgccagtagtataagtgagtataagggagatcataaaaagccaaaaagccaaataaattccaagatctcatcactgaatctagattggggaa 22045241  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||| ||||    
T  22045240 ggaggtaggccctccgacttcctacgtgaaggtgat 22045205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 25356946 - 25357181
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  25356946 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttctaatcttagtggtgcattaacctttaaagat 25357045  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25357046 tctcaaagcgccagtagtataagtgagtataagggagatcataaaaagccaaaaagccaaataaattccaagatctcatcactgaatctagattggggaa 25357145  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||| ||||    
T  25357146 ggaggtaggccctccgacttcctacgtgaaggtgat 25357181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 16775086 - 16775321
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||     
T  16775086 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttctaatcttagtggtgcattaacctttaaggac 16775185  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| |||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  16775186 tctcaaagcgccagtagtataagtgagtataagggagatcataaaaagctaaaaagcaaaataaattccaagatctcatcactgaatctagattggggaa 16775285  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||| ||||    
T  16775286 ggaggtaggccctccgacttcctacgtgaaggtgat 16775321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 17589843 - 17590077
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  17589843 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttctaatcttagtggtgcattaacctttaaaaat 17589942  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||  ||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  17589943 tctcaaaacgccagtagtataagtgagtataagggagatcataaaaagccaaaaagccaaat-aattccaagatctcatcactgaatctagattggggaa 17590041  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||| ||||    
T  17590042 ggaggtaggccctccgacttcctacgtgaaggtgat 17590077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 3 - 238
Target Start/End: Complemental strand, 24796064 - 24795830
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||| ||    
T  24796064 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgtgttctaatcttagtggtgcattaacctttaaaaat 24795965  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||    
T  24795964 tctcaaagcgccagtagtataagtgagtataagggagatcataaaaagccaaaaagccaaat-aattccaagatctcatcactaaatctagattggggaa 24795866  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||| ||||    
T  24795865 ggaggtaggccctccgacttcctacgtgaaggtgat 24795830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 62 - 238
Target Start/End: Original strand, 22664556 - 22664732
Alignment:
Q  62 aaacgcgttttaatcttagtggtgcattaacctttaaagattctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagcca 161  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22664556 aaacgcgttttaatcttagtggtacattaacctttaaagattctcaaagtgccagtagtataagttagtataagggagtgcataaaaagccaaaaagcca 22664655  T
Q  162 aataaattccaagatctcatcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22664656 aataaattccaagatctcatcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgat 22664732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 27627021 - 27627249
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||  ||||||||| |||| ||||||||||| |||||||||      |||||||||||||||||| ||    
T  27627021 caatgagaaaaacacaaagttgcttcccttgagtacgtgtatgaataggtaatttaaggaaacacgttttaat------ggtgcattaacctttaaaaat 27627114  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  27627115 tctcaaagcgccagtagtataagtgagtataagggagatcataaaaagccaaaaagccaaat-aattccaagatctcatcactgaatctagattggggaa 27627213  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||| ||||    
T  27627214 ggaggtaggccctccgacttcctacgtgaaggtgat 27627249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 3 - 233
Target Start/End: Complemental strand, 25145544 - 25145315
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||  ||||||||| |||||||| | || ||||||||| |     
T  25145544 caatgagaaaaacacaa-gttgcttcccttgagtaagtgtatgaataggtattttaaggaaatacgttttaattttagtggtacgttgacctttaaaaac 25145446  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||||   |||||||||||||||||||| |||||| ||||||||||||| |||||||  |||| |||| |  ||| ||||||||||||||||||||    
T  25145445 tctcaaagtaaaagtagtataagttagtataaaggagtttataaaaagccaaatagccaaaataatttcaaggttgcattattgaatctagattggggaa 25145346  T
Q  203 ggaggtaggccctccgacttcctacgtgaag 233  Q
    |||||||||||||||||||||||||||||||    
T  25145345 ggaggtaggccctccgacttcctacgtgaag 25145315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 203
Target Start/End: Complemental strand, 24517100 - 24516902
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||  |||||||||||||| ||||| |||| ||| |||| |||| ||||||||| |     
T  24517100 caatgagaaaaacacaaa-ttgcttcccttgagtaagtgtatgaatatgtattttaaggaaaagcgttctaattttaatggtacattgacctttaaaaac 24517002  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    | || ||||   |||||||| ||||||||||||||||   ||||||||||||| |||||||  |||| ||||||  ||| |||||||||||||||| |||    
T  24517001 tatc-aagtaaaagtagtatgagttagtataagggagcatataaaaagccaaatagccaaaataatttcaagattgcattattgaatctagattggagaa 24516903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 12132 - 12072
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12132 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 12072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 22664761 - 22664821
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22664761 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 22664821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 117242 - 117302
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  117242 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 117302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 25145285 - 25145225
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25145285 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 25145225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 16775350 - 16775410
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  16775350 catcgttgaaactagattggggaaggaggtaggccctccgacttcctacgtgaagacgatg 16775410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 22045176 - 22045116
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22045176 catcgttgaaactagattggggaaggaggtaggccctccgacttcctacgtgaagacgatg 22045116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 25357210 - 25357270
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25357210 catcgttgaaactagattggggaaggaggtaggccctccgacttcctacgtgaagacgatg 25357270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 24795797 - 24795742
Alignment:
Q  184 ttgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  24795797 ttgaaactagattggggaaggaggtaggccctccgacttcctacgtgaagacgatg 24795742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 25145211 - 25145160
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25145211 cattgaatctagattggggaagggggtaggccctccgacttcctacgtgaag 25145160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 27627282 - 27627337
Alignment:
Q  184 ttgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  27627282 ttgaaactagattggggaaggaggtaggccctccgacttcctacgtgaagacgatg 27627337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Complemental strand, 12058 - 12004
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  12058 cattgaatctagattggggaagggggtaggccctccgacttcctaggtgaagatg 12004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 117316 - 117370
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  117316 cattgaatctagattggggaagggggtaggccctccgacttcctaagtgaagatg 117370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 22664835 - 22664889
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  22664835 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaagatg 22664889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 17590106 - 17590166
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  17590106 catcgttgaaactagattggggaaggaggtaggccctccgacttcctacgagaagacgatg 17590166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 24795730 - 24795678
Alignment:
Q  180 atcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  24795730 atcattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 24795678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 25366536 - 25366440
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaa 99  Q
    |||||||||||||||  ||||||   |||||||||| ||||||||| |||||||||||||| | |||| |||| |||||||| | ||||||||||||    
T  25366536 caatgagaaaaacacctagttgcaatccttgagtaagtgtatgaataggtattttaaggaagcacgttctaattttagtggtacgttaacctttaaa 25366440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 16775424 - 16775474
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  16775424 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 16775474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 17590180 - 17590230
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  17590180 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 17590230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 22045102 - 22045052
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  22045102 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 22045052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 25357284 - 25357334
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  25357284 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 25357334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 25371741 - 25371646
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaa 99  Q
    ||||||||||| ||||| ||||| ||||||||| || ||||||||| |||| ||||||||| | |||| |||| |||||||| | ||||||||||||    
T  25371741 caatgagaaaagcacaa-gttgcatcccttgagcaagtgtatgaataggtactttaaggaagcacgttctaattttagtggtacgttaacctttaaa 25371646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 232
Target Start/End: Original strand, 27627349 - 27627401
Alignment:
Q  180 atcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||||| ||||||||||||||| | |||||||||    
T  27627349 atcattgaatctagattggggaagggggtaggccctccgaccttctacgtgaa 27627401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 23643716 - 23643767
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||||||||||||||| |||||||||||| || ||||||||||||    
T  23643716 cattgaatctagattggggaagggggtaggccctccaacctcctacgtgaag 23643767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 22664522 - 22664558
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaa 39  Q
    |||||||||||||||||||||||||||||||||||||    
T  22664522 caatgagaaaaacacaaagttgcttcccttgagtaaa 22664558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 239
Target Start/End: Original strand, 23643666 - 23643701
Alignment:
Q  204 gaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||||||||||||||||||||||||||||||||||    
T  23643666 gaggtaggccctccgacttcctacgtgaagatgatg 23643701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 24170761 - 24170821
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    ||||||||||| |||  ||||||   |||||||||| ||||||||| ||||||||||||||    
T  24170761 caatgagaaaagcacctagttgcaatccttgagtaagtgtatgaataggtattttaaggaa 24170821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 27630948 - 27631008
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    |||||||||||||||   |||||   |||||||||| ||||||||| ||||||||||||||    
T  27630948 caatgagaaaaacacctggttgcaatccttgagtaagtgtatgaataggtattttaaggaa 27631008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 27769581 - 27769521
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    |||||||||||||||  ||||||   |||||||||| ||||||| | ||||||||||||||    
T  27769581 caatgagaaaaacacctagttgcaatccttgagtaagtgtatgagtaggtattttaaggaa 27769521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 188; Significance: 1e-102; HSPs: 3)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 3 - 238
Target Start/End: Original strand, 474 - 708
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  474 caatgagaaaaacacaaagttgcttccctagagtaaatgtatgaataggtattttaaggaaacgcgttctaatcttagtggtgcattaacctttaaaaat 573  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||    
T  574 tctcaaagcgccagtagtataagtgagtataagggagatcataaaaagccaaaaagccaaat-aactccaagatctcatcactgaatctagattggggaa 672  T
Q  203 ggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||| ||||    
T  673 ggaggtaggccctccgacttcctacgtgaaggtgat 708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 741 - 796
Alignment:
Q  184 ttgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  741 ttgaaactagattggggaaggaggtaggccctccgacttcctacgtgaagacgatg 796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 810 - 860
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  810 cattgaatctagattggggaagggggtaggccctccgacctcctacgtgaa 860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 129; Significance: 7e-67; HSPs: 2)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 3 - 235
Target Start/End: Original strand, 7446 - 7676
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||  ||| ||||||||| |     
T  7446 caatgagaaaaacacaa-gttgcttcccttgagtaaatgtatgaataggtattttaaggaaacgcgttctaattttagtggtatattgacctttaaaaac 7544  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||| ||   |||||||||||||||||||||||||   ||||||||||||| |||||||  |||| ||||||  ||| ||||||||||||||||||||    
T  7545 tctcaa-gtaaaagtagtataagttagtataagggagcctataaaaagccaaatagccaaaataatttcaagattacattattgaatctagattggggaa 7643  T
Q  203 ggaggtaggccctccgacttcctacgtgaagat 235  Q
    || ||||||||||||||||||||||||||||||    
T  7644 gggggtaggccctccgacttcctacgtgaagat 7676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 182 - 232
Target Start/End: Original strand, 7694 - 7744
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaa 232  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  7694 cattgaatctagattggggaagggggtaggccctccgacttcctacttgaa 7744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 121; Significance: 4e-62; HSPs: 2)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 3 - 235
Target Start/End: Complemental strand, 4389 - 4159
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    ||||||||||||||||| |||||||||||| ||||| ||||| ||| ||||||||||||||| ||||| |||| |||||||| | || ||||||||| ||    
T  4389 caatgagaaaaacacaa-gttgcttcccttaagtaagtgtat-aataggtattttaaggaaatgcgttctaattttagtggtacgttgacctttaaaaat 4292  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||||   |||||||||||||||||||||||||    |||||||||||| |||||||  |||| ||||||  ||| ||||||||||||||||||||    
T  4291 tctcaaagtaaaagtagtataagttagtataagggagcctgtaaaaagccaaatagccaaaataatttcaagattacattattgaatctagattggggaa 4192  T
Q  203 ggaggtaggccctccgacttcctacgtgaagat 235  Q
    |||||||||||||||||||||||||||||||||    
T  4191 ggaggtaggccctccgacttcctacgtgaagat 4159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 179 - 234
Target Start/End: Complemental strand, 4127 - 4072
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaaga 234  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4127 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaaga 4072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 119; Significance: 7e-61; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 3 - 233
Target Start/End: Complemental strand, 17324 - 17095
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    ||||||||||||||||| | |||||||||||||||| ||||||||| |||||||||||||||   |||||||| |||||||| | || ||||||||| |     
T  17324 caatgagaaaaacacaa-gctgcttcccttgagtaagtgtatgaataggtattttaaggaaatatgttttaattttagtggtacgttgacctttaaaaac 17226  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    |||||||||   |||||||||||||||||||| |||||| ||||||||||||| |||||||  |||| |||| |  ||| ||||||||||||||||||||    
T  17225 tctcaaagtaaaagtagtataagttagtataaaggagtttataaaaagccaaatagccaaaataatttcaaggttgcattattgaatctagattggggaa 17126  T
Q  203 ggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||| |||||||||||||||||||||||||    
T  17125 ggaggcaggccctccgacttcctacgtgaag 17095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 114; Significance: 6e-58; HSPs: 4)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 12921 - 13050
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  12921 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaaggaaacacgttttaatcttagtggtacattaacctttaaagat 13020  T
Q  103 tctcaaagtgccagtagtataagttagtat 132  Q
    |||||||||| |||||||||||||||||||    
T  13021 tctcaaagtgtcagtagtataagttagtat 13050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 15244 - 15348
Alignment:
Q  134 agggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15244 agggagctcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 15343  T
Q  234 atgat 238  Q
    |||||    
T  15344 atgat 15348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 15378 - 15438
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15378 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 15438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 15452 - 15506
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatg 236  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  15452 cattgaatctagattggggaagggggtaggccctccgacttcctatgtgaagatg 15506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 114; Significance: 6e-58; HSPs: 5)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 252634 - 252413
Alignment:
Q  19 aagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagattctcaa-agtgccagt 117  Q
    ||||||||||||||||||||||||||| || ||||||||||| ||| || || |||| |||||||| | || ||||||||| ||| |||| |||   |||    
T  252634 aagttgcttcccttgagtaaatgtatggataggtattttaagaaaatgcattctaatattagtggtacgttgacctttaaaaattttcaagagtaaaagt 252535  T
Q  118 agtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaaggaggtaggccctcc 217  Q
    |||||||||||||||||||||||  ||||||||||||| ||||||||  ||| |||| || |||||||||||||||||||||||||| ||||||||||||    
T  252534 agtataagttagtataagggagtctataaaaagccaaatagccaaattgatttcaaggtcgcatcattgaatctagattggggaagggggtaggccctcc 252435  T
Q  218 gacttcctacgtgaagatgatg 239  Q
    |||||||||||||||| |||||    
T  252434 gacttcctacgtgaaggtgatg 252413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 252315 - 252264
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  252315 cattgaatctagatttgggaaggaggtaggccctccgacttcctacgtgaag 252264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 252387 - 252329
Alignment:
Q  181 tcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||    
T  252387 tcattgaatctagactggggaagagggtaggccctccgacttcctacgtgaagatgatg 252329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 237
Target Start/End: Complemental strand, 355085 - 355029
Alignment:
Q  181 tcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatga 237  Q
    |||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||    
T  355085 tcattgaatctagattggggaagggggtacgccctctgacttcctacgtgaagatga 355029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 355013 - 354962
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  355013 cattgaatctaggttggggaagggggtaggccctccgacttcctacgtgaag 354962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 110; Significance: 2e-55; HSPs: 3)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 3048 - 2836
Alignment:
Q  19 aagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagattctcaaagtgccagta 118  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||| |||||||| | |||||||||||| |||||||||||   | ||    
T  3048 aagttgcttcccttgagtaaatgtatgaataggtattttaaggaaatgcgttctaattttagtggtacgttaacctttaaaaattctcaaagtaaaaata 2949  T
Q  119 gtataagttagtataagggagttcataaaaagccaaaaagc-caaataaattccaagatctcatcattgaatctagattggggaaggaggtaggccctcc 217  Q
    |||||||||||||||| |||||| ||||||||||   ||||  ||||  ||| |||| |  ||| |||||||||||||||||||||||||||||||||||    
T  2948 gtataagttagtataaaggagtttataaaaagcc---aagctaaaatttatttcaaggttgcattattgaatctagattggggaaggaggtaggccctcc 2852  T
Q  218 gacttcctacgtgaag 233  Q
    ||||||||||||||||    
T  2851 gacttcctacgtgaag 2836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 2806 - 2746
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  2806 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 2746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 2732 - 2681
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||||||||||||||| |||||||||||| || || |||||||||    
T  2732 cattgaatctagattggggaagggggtaggccctccaacctcatacgtgaag 2681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 110; Significance: 2e-55; HSPs: 3)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 3 - 232
Target Start/End: Complemental strand, 35883 - 35656
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||| |||| |||||||| |||| ||||||||| |     
T  35883 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaataggtattttaagaaaatgcgttctaattttagtggtacattgacctttaaaaac 35784  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    ||| |||||   ||||||||||||| |||||||||||   ||||||||||||| |||||||  |||| ||||||  | | ||||||||||||||||| ||    
T  35783 tct-aaagtaaaagtagtataagtttgtataagggagcctataaaaagccaaatagccaaaataatttcaagattgcgttattgaatctagattgggaaa 35685  T
Q  203 ggaggtaggccctccgacttcctacgtgaa 232  Q
    || |||||||||||||||||||||| ||||    
T  35684 gg-ggtaggccctccgacttcctacatgaa 35656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 35625 - 35565
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  35625 catcgttgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 35565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 35551 - 35500
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  35551 cattgaatctagattggggaagggggtaggccctccgacttcctacatgaag 35500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 102; Significance: 9e-51; HSPs: 4)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 19 - 239
Target Start/End: Original strand, 120400 - 120621
Alignment:
Q  19 aagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagattctcaaa-gtgccagt 117  Q
    |||||||||||||||||||||||| || || |||||||| |||||| ||||| |||| |||||||| | || ||||||||| ||||||||| ||   |||    
T  120400 aagttgcttcccttgagtaaatgtgtggataggtatttttaggaaatgcgttctaatattagtggtacgttgacctttaaaaattctcaaaagtaaaagt 120499  T
Q  118 agtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaaggaggtaggccctcc 217  Q
    |||||||||||||||||||||||  ||||| ||||||  ||||||||  ||| |||  || |||||||||||||| ||||||||||| ||||||||||||    
T  120500 agtataagttagtataagggagtctataaatagccaattagccaaattgatttcaaagtcgcatcattgaatctacattggggaagggggtaggccctcc 120599  T
Q  218 gacttcctacgtgaagatgatg 239  Q
    |||||||||||||||| |||||    
T  120600 gacttcctacgtgaaggtgatg 120621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 116096 - 116232
Alignment:
Q  19 aagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagattctc-aaagtgccagt 117  Q
    |||||||||||||||||||||||| || || |||||||| |||||| ||||| |||| |||||||| | || ||||||||| |||||| |||||   |||    
T  116096 aagttgcttcccttgagtaaatgtgtggataggtatttttaggaaatgcgttctaatattagtggtacgttgacctttaaaaattctcaaaagtaaaagt 116195  T
Q  118 agtataagttagtataagggagttcataaaaagccaa 154  Q
    |||||||||||||||||||||||  ||||| ||||||    
T  116196 agtataagttagtataagggagtctataaatagccaa 116232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 120647 - 120704
Alignment:
Q  181 tcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  120647 tcattgaatctagattggggaaggaggtaggccctccaacttcctacgtgaagatgat 120704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 120719 - 120770
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  120719 cattgaatctagattgaggaagggggtaggccctccgacttcctacgtgaag 120770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 131 - 238
Target Start/End: Complemental strand, 3546 - 3439
Alignment:
Q  131 ataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaaggaggtaggccctccgacttcctacgtg 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  3546 ataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattgtggaaggaggtaggccctccgacttcctacgtg 3447  T
Q  231 aagatgat 238  Q
     |||||||    
T  3446 tagatgat 3439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 3411 - 3351
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3411 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 3351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 100; Significance: 1e-49; HSPs: 3)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 291 - 504
Alignment:
Q  19 aagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagattctcaaagtgccagta 118  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||| |||||||| | |||||| ||||| |||||||||||   | ||    
T  291 aagttgcttcccttgagtaaatgtatgaataggtattttaaggaaatgcgttctaattttagtggtacgttaaccattaaaaattctcaaagtaaaaata 390  T
Q  119 gtataagttagtataagggagttcataaaaagccaaaaagc--caaataaattccaagatctcatcattgaatctagattggggaaggaggtaggccctc 216  Q
    ||||||||||||||||  ||||| ||||||||||   ||||   ||||  ||| |||| |  ||| ||||||||||||||||||||||||||||||||||    
T  391 gtataagttagtataaaagagtttataaaaagcc---aagctaaaaatttatttcaaggttgcattattgaatctagattggggaaggaggtaggccctc 487  T
Q  217 cgacttcctacgtgaag 233  Q
    |||||||||||||||||    
T  488 cgacttcctacgtgaag 504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 538 - 598
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  538 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 613 - 664
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||||||||  ||||| ||||||||||||||||||||||||||||    
T  613 cattgaatctagattgaagaagggggtaggccctccgacttcctacgtgaag 664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 88; Significance: 2e-42; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 59395 - 59182
Alignment:
Q  19 aagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagattctcaaagtgccagta 118  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||| | |||||||||||| |||||||||||   | ||    
T  59395 aagttgcttcccttgagtaaatgtatgaataggtattttaaggaaatgcgttttaattttagtggtacgttaacctttaaaaattctcaaagtaaaaata 59296  T
Q  119 gtataagttagtataagggagttcataaaaagccaaaaagc--caaataaattccaagatctcatcattgaatctagattggggaaggaggtaggccctc 216  Q
     ||||||||||||||| |||||| ||||||| ||   ||||   |||   ||| |||| |   || ||||||||||||||||||||||  ||||||||||    
T  59295 atataagttagtataaaggagtttataaaaatcc---aagcttaaaacttatttcaaggttgaattattgaatctagattggggaagggagtaggccctc 59199  T
Q  217 cgacttcctacgtgaag 233  Q
    |||||||||||||||||    
T  59198 cgacttcctacgtgaag 59182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 59148 - 59088
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  59148 catcattgaatctagattggggaagggagtaggccctccgacttcctacgtgaagatgatg 59088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 59073 - 59022
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||||||||||||||  |||||||||||| || ||||||||||||    
T  59073 cattgaatctagattggggaagtgggtaggccctccaacctcctacgtgaag 59022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 85; Significance: 1e-40; HSPs: 4)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 91 - 239
Target Start/End: Complemental strand, 15318 - 15170
Alignment:
Q  91 acctttaaagattctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatc 190  Q
    ||||||||| |||||||||||   ||||||||||||||||||||||||||  ||||||||||||| ||||||||  ||| |||| || |||||||| |||    
T  15318 acctttaaaaattctcaaagtaaaagtagtataagttagtataagggagtctataaaaagccaaatagccaaattgatttcaaggtcgcatcattggatc 15219  T
Q  191 tagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||| || ||||||||||||||||||||||||| |||||    
T  15218 tagattggggaagggggcaggccctccgacttcctacgtgaaggtgatg 15170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 91 - 196
Target Start/End: Complemental strand, 18572 - 18467
Alignment:
Q  91 acctttaaagattctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatc 190  Q
    ||||||||| |||||||||||   ||||||||||||||||||||||||||  ||||||||||||| ||||||||  ||| |||| || |||||||| |||    
T  18572 acctttaaaaattctcaaagtaaaagtagtataagttagtataagggagtctataaaaagccaaatagccaaattgatttcaaggtcgcatcattggatc 18473  T
Q  191 tagatt 196  Q
    ||||||    
T  18472 tagatt 18467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 181 - 239
Target Start/End: Complemental strand, 15144 - 15084
Alignment:
Q  181 tcattgaatctagattggggaaggagg--taggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||    
T  15144 tcattgaatctagattggggaagggggggtaggccctccgacttcctacgtgaagatgatg 15084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 229
Target Start/End: Complemental strand, 15070 - 15023
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgt 229  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||    
T  15070 cattgaatctagattggggaagggggtaggtcctccgacttcctacgt 15023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 9101 - 8958
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||| ||||| |||| |||||||| | || ||||||||| ||    
T  9101 caatgagaaaaacacaa-gttgcttcccttgagtaagtgtatgaataggtattttaaggaaatgcgttctaattttagtggtacgttgacctttaaaaat 9003  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaa 147  Q
    |||||||||   ||||||||||||||||||||||||||| |||||    
T  9002 tctcaaagtaaaagtagtataagttagtataagggagtttataaa 8958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0974 (Bit Score: 83; Significance: 2e-39; HSPs: 3)
Name: scaffold0974
Description:

Target: scaffold0974; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 233
Target Start/End: Original strand, 551 - 764
Alignment:
Q  19 aagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagattctcaaagtgccagta 118  Q
    ||||| |||||||||||||||||||||||| | ||||||||||||| || || |||| |||||||| | |||||||||||| ||||||||| |   | ||    
T  551 aagttccttcccttgagtaaatgtatgaatagatattttaaggaaatgcattctaattttagtggtacgttaacctttaaaaattctcaaaataaaaata 650  T
Q  119 gtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaaggaggtaggccctccg 218  Q
     ||||||||||||||| ||||||  ||||||||| |||    ||||  ||| |||| |  ||| ||||||||||||||||||||||||||||||||||||    
T  651 atataagttagtataaaggagtttctaaaaagcc-aaacttaaaatttatttcaaggttgcattattgaatctagattggggaaggaggtaggccctccg 749  T
Q  219 acttcctacgtgaag 233  Q
    || ||||||||||||    
T  750 acatcctacgtgaag 764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0974; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 798 - 858
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  798 catcattgaatctagattggggaaggaggtaggccctcaaacttcctacgtgaagatgatg 858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0974; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 873 - 924
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||||||||||||||| |||||||||||| || ||||||||||||    
T  873 cattgaatctagattggggaagggggtaggccctccaacctcctacgtgaag 924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 3 - 203
Target Start/End: Complemental strand, 1018 - 820
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagat 102  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||  |||||||||||||| ||||| |||| ||| |||| |||| ||||||||| |     
T  1018 caatgagaaaaacacaaa-ttgcttcccttgagtaagtgtatgaatatgtattttaaggaaaagcgttctaattttaatggtacattgacctttaaaaac 920  T
Q  103 tctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataaattccaagatctcatcattgaatctagattggggaa 202  Q
    | || ||||   |||||||| ||||||||||||||||   ||||||||||||| |||||||  |||| ||||||  ||| |||||||||||||||| |||    
T  919 tatc-aagtaaaagtagtatgagttagtataagggagcatataaaaagccaaatagccaaaataatttcaagattgcattattgaatctagattggagaa 821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 67 - 233
Target Start/End: Complemental strand, 27156 - 26990
Alignment:
Q  67 cgttttaatcttagtggtgcattaacctttaaagattctcaaagtgccagtagtataagttagtataagggagttcataaaaagccaaaaagccaaataa 166  Q
    |||| |||| |||||||| | |||||||||||| |||||||||||   | || ||||||||||||||| |||||| |||||||||||||     ||||      
T  27156 cgttctaattttagtggtacgttaacctttaaaaattctcaaagtaaaaataatataagttagtataaaggagtttataaaaagccaaagcttaaaattt 27057  T
Q  167 attccaagatctcatcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||| |||| |  ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  27056 atttcaaggttgcattattgaatctagattggggaaggaggcaggccctccgacttcctacgtgaag 26990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 26956 - 26896
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  26956 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 26896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 57; Significance: 7e-24; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 10737 - 10797
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10737 catcattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 10797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 235
Target Start/End: Original strand, 10652 - 10704
Alignment:
Q  183 attgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagat 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10652 attgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagat 10704  T

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Target: scaffold0026; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 10814 - 10862
Alignment:
Q  185 tgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10814 tgaatctagattggggaagggggtaggccctccgacttcctacgtgaag 10862  T

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Target: scaffold0026; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 10602 - 10644
Alignment:
Q  19 aagttgcttcccttgagtaaatgtatgaatgggtattttaagg 61  Q
    |||||||||||||||||||| ||||||||| ||||||| ||||    
T  10602 aagttgcttcccttgagtaagtgtatgaataggtatttcaagg 10644  T

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Target: scaffold0825 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 3364 - 3307
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3364 cattgaatctagattggggaagggggtaggccctccgacttcctacgtgaagatgatg 3307  T

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Target: scaffold0825; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 3293 - 3242
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||||||||||||||| | ||||||||| |||||||||| |||||    
T  3293 cattgaatctagattggggaaggggttaggccctctgacttcctacatgaag 3242  T

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Target: scaffold0222 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 26097 - 26157
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||| |||||||||||| ||||| || ||||||||||||    
T  26097 catcattgaatctagattggggaagggggtaggccctccaacttcgtaagtgaagatgatg 26157  T

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Target: scaffold0222; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 26171 - 26222
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  26171 cattgaatctagattggggaaggggataggccctccgacttcctacgtgaag 26222  T

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Target: scaffold0222; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 206 - 239
Target Start/End: Original strand, 26040 - 26073
Alignment:
Q  206 ggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||||||||||||||||||||||||||| |||||    
T  26040 ggtaggccctccgacttcctacgtgaaggtgatg 26073  T

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Target: scaffold0059 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 11823 - 11918
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaa 99  Q
    ||||||||||| || |||||||| ||||||||| || ||||||||| |||||||||||||| | |||| |||| |||||||| | ||||||||||||    
T  11823 caatgagaaaagca-aaagttgcatcccttgagcaagtgtatgaataggtattttaaggaagcacgttctaattttagtggtacgttaacctttaaa 11918  T

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Target: scaffold0013 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 233575 - 233480
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaa 99  Q
    ||||||||||| || |||||||| ||||||||| || ||||||||| |||||||||||||| | |||| |||| |||||||| | ||||||||||||    
T  233575 caatgagaaaagca-aaagttgcatcccttgagcaagtgtatgaataggtattttaaggaagcacgttctaattttagtggtacgttaacctttaaa 233480  T

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Target: scaffold1095 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 3)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 2550 - 2607
Alignment:
Q  181 tcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgat 238  Q
    ||||||| ||||||||||||||||  |||||||||||||||||||| |||||||||||    
T  2550 tcattgactctagattggggaagggagtaggccctccgacttcctatgtgaagatgat 2607  T

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Target: scaffold1095; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 2622 - 2673
Alignment:
Q  182 cattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaag 233  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||||||||||||    
T  2622 cattgaatcaagattggggaagggggtaggccctcagacttcctacgtgaag 2673  T

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Target: scaffold1095; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 2464 - 2524
Alignment:
Q  179 catcattgaatctagattggggaaggaggtaggccctccgacttcctacgtgaagatgatg 239  Q
    |||| ||| ||||| ||||||||||| |||||||||| ||||||||||||||||| |||||    
T  2464 catcgttggatctatattggggaagggggtaggcccttcgacttcctacgtgaaggtgatg 2524  T

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Target: scaffold0216 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 10852 - 10911
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||| | ||||||||||||    
T  10852 caatgagaaaagcacaa-gttgcttcccttgagtaaatgtatgaatagatattttaaggaa 10911  T

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Target: scaffold0216; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 141
Target Start/End: Original strand, 10948 - 10988
Alignment:
Q  101 attctcaaagtgccagtagtataagttagtataagggagtt 141  Q
    |||||||||||   |||||||||||||||||||||||||||    
T  10948 attctcaaagtaaaagtagtataagttagtataagggagtt 10988  T

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Target: scaffold0032 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 129
Target Start/End: Original strand, 90695 - 90780
Alignment:
Q  44 tgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaagattctcaaagtgccagtagtataagttag 129  Q
    ||||| ||||||||||| ||| ||||| |||| |||||||| | |||||||||||| |||||||||||   | |||||||||||||    
T  90695 tgaataggtattttaagaaaatgcgttctaattttagtggtacgttaacctttaaaaattctcaaagtaaaaatagtataagttag 90780  T

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Target: scaffold0117 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 32333 - 32238
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaa 99  Q
    ||||||||||| ||||| ||||| ||||||||| |  ||||||||| ||||||||||| || | |||| |||| |||||||| | ||||||||||||    
T  32333 caatgagaaaagcacaa-gttgcatcccttgagcatgtgtatgaataggtattttaagaaagcacgttctaattttagtggtacgttaacctttaaa 32238  T

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Target: scaffold1225 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1225
Description:

Target: scaffold1225; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 99
Target Start/End: Original strand, 1049 - 1141
Alignment:
Q  6 tgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaa 99  Q
    |||||||| ||||||||||| ||||||||| || ||||||| | |||||||||||| | |  ||| |||| |||||||| |||||||| |||||    
T  1049 tgagaaaagcacaaagttgcatcccttgagcaagtgtatgagtaggtattttaagg-agcatgttctaattttagtggtacattaacccttaaa 1141  T

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Target: scaffold0328 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 1022 - 928
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaaacgcgttttaatcttagtggtgcattaacctttaaa 99  Q
    ||||||||||| ||||| ||||| ||||||||| ||  |||||||| |||||||||||| | |||||| |||| ||||||||  ||||||| |||||    
T  1022 caatgagaaaagcacaa-gttgcatcccttgagcaagcgtatgaataggtattttaagg-agcgcgttctaattttagtggtatattaacccttaaa 928  T

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Target: scaffold0656 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0656
Description:

Target: scaffold0656; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 3301 - 3241
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    ||||||||||| |||  ||||||   |||||||||| ||||||||| ||||||||||||||    
T  3301 caatgagaaaagcacctagttgcaatccttgagtaagtgtatgaataggtattttaaggaa 3241  T

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Target: scaffold0258 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 22922 - 22862
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    ||||||||||| |||  ||||||   |||||||||| ||||||||| ||||||||||||||    
T  22922 caatgagaaaagcacctagttgcaatccttgagtaagtgtatgaataggtattttaaggaa 22862  T

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Target: scaffold0078 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 29937 - 29997
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    ||||||||||| |||  ||||||   |||||||||| ||||||||| ||||||||||||||    
T  29937 caatgagaaaagcacctagttgcaatccttgagtaagtgtatgaataggtattttaaggaa 29997  T

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Target: scaffold0035 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 51273 - 51213
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    ||||||||||| |||  ||||||   |||||||||| ||||||||| ||||||||||||||    
T  51273 caatgagaaaagcacctagttgcaatccttgagtaagtgtatgaataggtattttaaggaa 51213  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 12225 - 12165
Alignment:
Q  3 caatgagaaaaacacaaagttgcttcccttgagtaaatgtatgaatgggtattttaaggaa 63  Q
    ||||||||||| |||  ||||||   |||||||||| ||||||||| ||||||||||||||    
T  12225 caatgagaaaagcacctagttgcaatccttgagtaagtgtatgaataggtattttaaggaa 12165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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