View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3470_high_6 (Length: 601)

Name: NF3470_high_6
Description: NF3470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3470_high_6
NF3470_high_6
[»] chr8 (38 HSPs)
chr8 (1-257)||(45156163-45156419)
chr8 (388-586)||(45156790-45156985)
chr8 (388-516)||(14420864-14420992)
chr8 (388-516)||(5540867-5540995)
chr8 (407-516)||(25228016-25228123)
chr8 (407-494)||(18826725-18826812)
chr8 (388-516)||(10663011-10663139)
chr8 (425-494)||(12582240-12582309)
chr8 (452-516)||(5981156-5981220)
chr8 (339-399)||(25595487-25595547)
chr8 (204-339)||(45155944-45156074)
chr8 (339-399)||(17895320-17895380)
chr8 (339-399)||(25228149-25228209)
chr8 (407-482)||(22174782-22174857)
chr8 (388-470)||(43682669-43682751)
chr8 (388-516)||(33878110-33878238)
chr8 (339-399)||(5540798-5540858)
chr8 (388-470)||(18722181-18722264)
chr8 (339-398)||(25592302-25592361)
chr8 (388-470)||(25592371-25592454)
chr8 (388-470)||(25595556-25595639)
chr8 (178-257)||(39872153-39872232)
chr8 (342-399)||(20520089-20520146)
chr8 (425-482)||(30640541-30640598)
chr8 (407-470)||(14589707-14589770)
chr8 (425-494)||(19792948-19793019)
chr8 (340-399)||(43682601-43682660)
chr8 (342-385)||(45156724-45156767)
chr8 (339-399)||(18722113-18722172)
chr8 (339-399)||(33878041-33878101)
chr8 (339-385)||(10663162-10663208)
chr8 (209-253)||(35348676-35348720)
chr8 (228-264)||(39870914-39870950)
chr8 (193-260)||(1797742-1797809)
chr8 (195-254)||(7130139-7130198)
chr8 (207-254)||(7130616-7130663)
chr8 (174-257)||(42432010-42432093)
chr8 (210-254)||(42431681-42431725)
[»] scaffold0015 (1 HSPs)
scaffold0015 (339-516)||(197242-197428)
[»] chr5 (41 HSPs)
chr5 (339-516)||(22937858-22938055)
chr5 (388-516)||(43490793-43490921)
chr5 (404-509)||(37214773-37214878)
chr5 (388-516)||(32837083-32837211)
chr5 (339-518)||(14376658-14376836)
chr5 (407-494)||(14016927-14017014)
chr5 (425-516)||(18031710-18031801)
chr5 (388-517)||(31862871-31863000)
chr5 (425-517)||(21336650-21336743)
chr5 (407-494)||(17747639-17747726)
chr5 (424-494)||(28788309-28788379)
chr5 (425-494)||(39191353-39191422)
chr5 (425-516)||(21827949-21828041)
chr5 (435-497)||(2836699-2836761)
chr5 (339-397)||(21336524-21336582)
chr5 (425-494)||(40916795-40916867)
chr5 (388-470)||(42061532-42061614)
chr5 (452-517)||(7270240-7270305)
chr5 (339-399)||(21827823-21827883)
chr5 (339-399)||(31863009-31863069)
chr5 (425-492)||(4100346-4100413)
chr5 (171-254)||(25994907-25994990)
chr5 (435-494)||(30065584-30065643)
chr5 (339-399)||(42061623-42061683)
chr5 (175-254)||(14410734-14410813)
chr5 (175-254)||(25994553-25994632)
chr5 (343-397)||(37214905-37214959)
chr5 (425-482)||(2837584-2837641)
chr5 (388-516)||(28442053-28442181)
chr5 (407-470)||(7624303-7624366)
chr5 (177-254)||(17854694-17854771)
chr5 (343-399)||(28441988-28442044)
chr5 (339-399)||(28788203-28788263)
chr5 (171-254)||(26093001-26093084)
chr5 (169-254)||(25868115-25868200)
chr5 (177-254)||(26092580-26092657)
chr5 (207-254)||(25868504-25868551)
chr5 (339-385)||(32837234-32837280)
chr5 (221-254)||(6408649-6408682)
chr5 (342-399)||(39191468-39191525)
chr5 (339-371)||(21333508-21333540)
[»] chr3 (42 HSPs)
chr3 (388-516)||(16185528-16185656)
chr3 (388-517)||(35411675-35411805)
chr3 (407-516)||(19302255-19302364)
chr3 (339-432)||(55032740-55032833)
chr3 (425-515)||(9380012-9380102)
chr3 (418-504)||(31548563-31548649)
chr3 (426-516)||(34984668-34984758)
chr3 (425-516)||(53814971-53815062)
chr3 (426-516)||(54460367-54460457)
chr3 (425-494)||(16243188-16243257)
chr3 (425-494)||(54736759-54736828)
chr3 (418-516)||(29344674-29344773)
chr3 (424-494)||(43808900-43808970)
chr3 (339-470)||(52198351-52198502)
chr3 (388-516)||(538015-538143)
chr3 (429-494)||(10880798-10880863)
chr3 (414-503)||(19305445-19305534)
chr3 (388-516)||(23299425-23299553)
chr3 (406-516)||(3839790-3839903)
chr3 (391-470)||(10107489-10107568)
chr3 (388-516)||(10884018-10884146)
chr3 (339-399)||(6445464-6445524)
chr3 (388-516)||(6921890-6922018)
chr3 (339-399)||(6922027-6922087)
chr3 (425-517)||(41976320-41976412)
chr3 (339-385)||(23299356-23299402)
chr3 (388-465)||(18645613-18645690)
chr3 (341-398)||(28265139-28265196)
chr3 (339-399)||(18645544-18645604)
chr3 (343-397)||(10884157-10884211)
chr3 (435-516)||(20729395-20729477)
chr3 (339-399)||(538152-538212)
chr3 (339-391)||(17532520-17532572)
chr3 (175-254)||(16280913-16280992)
chr3 (339-389)||(16185459-16185509)
chr3 (412-470)||(17532565-17532623)
chr3 (218-254)||(4041044-4041080)
chr3 (225-257)||(45003382-45003414)
chr3 (339-399)||(53815109-53815169)
chr3 (356-399)||(22994412-22994455)
chr3 (339-382)||(35411831-35411874)
chr3 (207-253)||(30478487-30478533)
[»] scaffold0005 (3 HSPs)
scaffold0005 (404-508)||(246238-246342)
scaffold0005 (339-399)||(291100-291160)
scaffold0005 (388-494)||(290985-291091)
[»] chr6 (27 HSPs)
chr6 (388-516)||(9953036-9953164)
chr6 (407-482)||(13004434-13004509)
chr6 (425-494)||(10289208-10289277)
chr6 (435-516)||(28666095-28666176)
chr6 (339-399)||(23379616-23379676)
chr6 (339-399)||(23388955-23389015)
chr6 (178-254)||(32879699-32879775)
chr6 (388-516)||(5739061-5739190)
chr6 (388-482)||(2371448-2371541)
chr6 (388-470)||(23379685-23379768)
chr6 (407-470)||(31071540-31071603)
chr6 (339-397)||(5738992-5739050)
chr6 (449-494)||(20181295-20181340)
chr6 (449-494)||(22154651-22154696)
chr6 (343-391)||(2371558-2371606)
chr6 (418-466)||(12991556-12991604)
chr6 (339-399)||(34501551-34501611)
chr6 (388-470)||(23389024-23389107)
chr6 (339-385)||(9953187-9953233)
chr6 (177-257)||(26622233-26622313)
chr6 (177-257)||(26728211-26728291)
chr6 (388-468)||(34501462-34501542)
chr6 (407-470)||(28112641-28112704)
chr6 (206-253)||(31778837-31778884)
chr6 (409-470)||(6512442-6512503)
chr6 (425-466)||(13022190-13022231)
chr6 (208-253)||(30746502-30746547)
[»] chr4 (62 HSPs)
chr4 (404-508)||(14571034-14571138)
chr4 (388-517)||(5680468-5680597)
chr4 (339-470)||(37104064-37104195)
chr4 (407-494)||(29324001-29324088)
chr4 (407-494)||(44809795-44809882)
chr4 (425-494)||(3718358-3718427)
chr4 (425-494)||(40794214-40794283)
chr4 (388-516)||(49269735-49269863)
chr4 (425-515)||(21418980-21419070)
chr4 (339-516)||(18910604-18910801)
chr4 (425-516)||(27013229-27013321)
chr4 (410-494)||(34320738-34320822)
chr4 (425-516)||(12782106-12782197)
chr4 (388-470)||(12237400-12237482)
chr4 (388-470)||(19865515-19865597)
chr4 (388-466)||(40617684-40617762)
chr4 (388-516)||(5669628-5669756)
chr4 (388-516)||(15431164-15431292)
chr4 (388-516)||(15437778-15437906)
chr4 (388-516)||(33410834-33410962)
chr4 (425-516)||(15430674-15430766)
chr4 (425-516)||(15437288-15437380)
chr4 (388-517)||(9716950-9717079)
chr4 (388-516)||(3798668-3798796)
chr4 (435-516)||(53010377-53010458)
chr4 (425-516)||(19826701-19826793)
chr4 (339-399)||(40617615-40617675)
chr4 (425-516)||(24044966-24045057)
chr4 (428-518)||(44163999-44164090)
chr4 (407-470)||(56194768-56194831)
chr4 (408-470)||(56198075-56198137)
chr4 (435-516)||(52007350-52007431)
chr4 (339-399)||(15431301-15431361)
chr4 (339-399)||(15437915-15437975)
chr4 (175-254)||(32304744-32304823)
chr4 (425-494)||(27677874-27677944)
chr4 (425-494)||(27691933-27692003)
chr4 (388-465)||(5721843-5721920)
chr4 (407-468)||(33926169-33926230)
chr4 (339-399)||(5721774-5721834)
chr4 (343-395)||(19861094-19861146)
chr4 (339-398)||(3798599-3798658)
chr4 (407-470)||(15812973-15813036)
chr4 (435-486)||(35509229-35509280)
chr4 (175-254)||(53260181-53260260)
chr4 (388-470)||(19861159-19861241)
chr4 (388-470)||(53093767-53093849)
chr4 (411-519)||(15405793-15405901)
chr4 (215-255)||(4675040-4675080)
chr4 (170-254)||(19487526-19487610)
chr4 (339-390)||(9717097-9717148)
chr4 (195-254)||(11660950-11661009)
chr4 (407-470)||(47114822-47114885)
chr4 (435-516)||(19819950-19820032)
chr4 (177-254)||(32303915-32303992)
chr4 (339-384)||(33410765-33410810)
chr4 (339-399)||(53093858-53093917)
chr4 (346-385)||(19865453-19865492)
chr4 (342-376)||(5680629-5680663)
chr4 (224-253)||(45549363-45549392)
chr4 (425-466)||(48014841-48014882)
chr4 (209-253)||(34981916-34981960)
[»] chr7 (30 HSPs)
chr7 (339-516)||(8276012-8276209)
chr7 (406-516)||(20081530-20081640)
chr7 (388-517)||(26556509-26556638)
chr7 (418-494)||(17729995-17730071)
chr7 (425-517)||(45291383-45291475)
chr7 (425-516)||(9865551-9865642)
chr7 (425-516)||(45288047-45288138)
chr7 (426-516)||(9273944-9274034)
chr7 (425-494)||(4596833-4596902)
chr7 (339-399)||(26556647-26556707)
chr7 (425-494)||(4694745-4694814)
chr7 (425-494)||(9080398-9080467)
chr7 (425-494)||(10344638-10344707)
chr7 (339-399)||(10431523-10431583)
chr7 (407-470)||(16164935-16164998)
chr7 (1-64)||(42133230-42133293)
chr7 (407-470)||(48644662-48644725)
chr7 (388-517)||(10431385-10431514)
chr7 (110-158)||(42133367-42133415)
chr7 (339-399)||(45287940-45288000)
chr7 (388-516)||(4542074-4542202)
chr7 (339-399)||(45291276-45291336)
chr7 (407-470)||(6602667-6602730)
chr7 (388-470)||(2442149-2442231)
chr7 (169-226)||(23284767-23284824)
chr7 (1-57)||(42172023-42172079)
chr7 (157-254)||(30859856-30859955)
chr7 (207-253)||(42629201-42629247)
chr7 (181-254)||(16488152-16488225)
chr7 (223-255)||(30665198-30665230)
[»] chr1 (25 HSPs)
chr1 (388-516)||(29644180-29644308)
chr1 (407-494)||(27537104-27537191)
chr1 (407-494)||(45961598-45961685)
chr1 (418-516)||(41059135-41059234)
chr1 (429-516)||(2404722-2404809)
chr1 (339-399)||(49499371-49499431)
chr1 (388-494)||(2793321-2793427)
chr1 (388-470)||(49499440-49499522)
chr1 (339-399)||(2793436-2793496)
chr1 (407-470)||(6071791-6071854)
chr1 (407-470)||(31204060-31204123)
chr1 (425-494)||(42021743-42021812)
chr1 (339-399)||(1951148-1951208)
chr1 (176-254)||(32713210-32713288)
chr1 (435-516)||(21019287-21019367)
chr1 (388-468)||(1951217-1951297)
chr1 (425-493)||(21108302-21108370)
chr1 (339-398)||(42021861-42021920)
chr1 (216-254)||(40198814-40198852)
chr1 (193-254)||(11434754-11434815)
chr1 (339-397)||(34733067-34733124)
chr1 (169-254)||(7013646-7013731)
chr1 (172-213)||(32306417-32306458)
chr1 (273-317)||(11434692-11434736)
chr1 (226-254)||(37920166-37920194)
[»] chr2 (38 HSPs)
chr2 (388-494)||(16788411-16788516)
chr2 (388-517)||(25139912-25140041)
chr2 (407-494)||(31430529-31430616)
chr2 (407-494)||(38014658-38014745)
chr2 (339-468)||(29439643-29439772)
chr2 (425-517)||(10599950-10600042)
chr2 (388-516)||(25873203-25873331)
chr2 (425-516)||(3874482-3874573)
chr2 (388-494)||(15466192-15466298)
chr2 (428-494)||(13972725-13972791)
chr2 (388-521)||(25869830-25869963)
chr2 (425-494)||(13136784-13136853)
chr2 (339-399)||(25869972-25870032)
chr2 (339-399)||(38006089-38006149)
chr2 (435-494)||(43722926-43722985)
chr2 (444-494)||(5665852-5665902)
chr2 (407-481)||(31428340-31428414)
chr2 (195-257)||(33710898-33710960)
chr2 (388-470)||(38006158-38006240)
chr2 (388-516)||(30275563-30275691)
chr2 (339-399)||(36809238-36809298)
chr2 (388-470)||(25821789-25821872)
chr2 (407-470)||(36985626-36985689)
chr2 (407-470)||(45453097-45453160)
chr2 (435-493)||(5104974-5105032)
chr2 (388-516)||(36809307-36809435)
chr2 (435-491)||(6825999-6826055)
chr2 (339-399)||(10600100-10600160)
chr2 (339-398)||(25821720-25821779)
chr2 (407-470)||(45456346-45456409)
chr2 (388-516)||(26358672-26358800)
chr2 (339-399)||(26358809-26358869)
chr2 (175-257)||(3816278-3816360)
chr2 (339-385)||(25873354-25873400)
chr2 (339-399)||(16788525-16788585)
chr2 (339-399)||(30275495-30275554)
chr2 (210-253)||(19004907-19004950)
chr2 (207-253)||(19004816-19004862)
[»] scaffold0080 (2 HSPs)
scaffold0080 (388-516)||(26253-26373)
scaffold0080 (339-384)||(26397-26442)
[»] scaffold1993 (1 HSPs)
scaffold1993 (425-517)||(1044-1136)
[»] scaffold0757 (1 HSPs)
scaffold0757 (425-516)||(4563-4654)
[»] scaffold0270 (6 HSPs)
scaffold0270 (425-492)||(4329-4396)
scaffold0270 (425-492)||(11459-11526)
scaffold0270 (425-492)||(969-1036)
scaffold0270 (339-373)||(862-896)
scaffold0270 (339-373)||(4222-4256)
scaffold0270 (339-373)||(11352-11386)
[»] scaffold0381 (1 HSPs)
scaffold0381 (425-516)||(6462-6554)
[»] scaffold0520 (1 HSPs)
scaffold0520 (426-516)||(4790-4880)
[»] scaffold0035 (2 HSPs)
scaffold0035 (388-470)||(61643-61725)
scaffold0035 (339-399)||(61734-61794)
[»] scaffold0012 (1 HSPs)
scaffold0012 (160-254)||(36136-36230)
[»] scaffold0045 (1 HSPs)
scaffold0045 (410-470)||(89011-89071)
[»] scaffold0334 (1 HSPs)
scaffold0334 (392-470)||(18509-18588)
[»] scaffold1684 (1 HSPs)
scaffold1684 (411-519)||(369-477)
[»] scaffold0027 (1 HSPs)
scaffold0027 (172-254)||(49227-49311)


Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 45156163 - 45156419
Alignment:
Q  1 agtgttgttaatattcctggtctgaaagcaccgctaacattatgttgtagttgaagtctatcttttgaaatgttacttttacgaataaacaaacaaacca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45156163 agtgttgttaatattcctggtctgaaagcaccgctaacattatgtggtagttgaagtctatcttttgaaatgttacttttacgaataaacaaacaaacca 45156262  T
Q  101 gggtccaaaaactagtactaaagttccatgacacaaaaaattaaatgttgttttcatttgaaattttgaaaccagcgtgagttaactcgcgtatgtgtta 200  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||    ||||||||    
T  45156263 gggtccaaaaactagtactaaagttccatgacaaaaaaaattaaatgttgttttcatttgaaattttgaaaacagcgtgaattaactcattcatgtgtta 45156362  T
Q  201 atttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaatta 257  Q
    ||| ||||||||||||| ||| ||||||||| |||||||||||||||||||||||||    
T  45156363 attccagcgtgagataactcaagcagcgtgacttaagtcacgcatgtgtaaaaatta 45156419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 388 - 586
Target Start/End: Original strand, 45156790 - 45156985
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactc 487  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  45156790 aatcgtgacacgattgtgctttcttcaaaatcttctatttttcttgcttttcttgctgctaaagcttgcttgtgaactcaaaaatatcataaaaagactc 45156889  T
Q  488 taaaaatgtggaatgacagactatcatcatcagtgttcctttagaacttgcctctcccataatttctttgatgagggtgttaatgagtgggtggagtgt 586  Q
    ||||||| | |||||| | |||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45156890 taaaaatatagaatgataaact---gtcatcagtgttcctttagaacttgcctctcccataatttctttgatgagggtgttaatgagtgggtggagtgt 45156985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 388 - 516
Target Start/End: Complemental strand, 14420992 - 14420864
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactc 487  Q
    |||||||| ||| || |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  14420992 aatcgtgatacgattttgctttcttcaaaatcttatatttttcttgcttttcttgttgcttaagcttgcttgtgaactaaaaaatatcataaaaagactc 14420893  T
Q  488 taaaaatgtggaatgacagactatcatca 516  Q
    |||||||||||||||| ||||| ||||||    
T  14420892 taaaaatgtggaatgagagactgtcatca 14420864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 388 - 516
Target Start/End: Original strand, 5540867 - 5540995
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactc 487  Q
    |||||||||| | || ||||| ||||||||||||||||||||||| ||| ||||| |||| | |||||||||||||||||||||||||||||||||||||    
T  5540867 aatcgtgacatgattttgcttccttcaaaatcttctatttttcttacttgtcttgctgcttatgcttgcttgtgaactcaaaaatatcataaaaagactc 5540966  T
Q  488 taaaaatgtggaatgacagactatcatca 516  Q
    |||||||||||||||||| ||| ||||||    
T  5540967 taaaaatgtggaatgacaaactgtcatca 5540995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 407 - 516
Target Start/End: Complemental strand, 25228123 - 25228016
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacag 506  Q
    ||||||||||||||||||||||||||| |||||||| | ||  |||||||||||||||||||||||||||| |||||||||||||| |||| |||| |||    
T  25228123 tttcttcaaaatcttctatttttcttgtttttcttgcttcttgagcttgcttgtgaactcaaaaatatcat-aaaagactctaaaattgtgcaatg-cag 25228026  T
Q  507 actatcatca 516  Q
    ||| ||||||    
T  25228025 actgtcatca 25228016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 407 - 494
Target Start/End: Original strand, 18826725 - 18826812
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    ||||||||||||||| |||||||| |||||| ||||||| | ||| |||||||||||||||||| |||||||||||||||||||||||    
T  18826725 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagtttgcttgtgaactcaaaattatcataaaaagactctaaaaat 18826812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 388 - 516
Target Start/End: Complemental strand, 10663139 - 10663011
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagact 486  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||  ||| || | |  ||||||||||||||| || ||||||| |||||||||    
T  10663139 aatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgctgtttagacttgcttgtgaactc-aacatatcatgaaaaagact 10663041  T
Q  487 ctaaaaatgtggaatgacagactatcatca 516  Q
    ||||||||   ||||||| |||| ||||||    
T  10663040 ctaaaaatagtgaatgactgactgtcatca 10663011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 425 - 494
Target Start/End: Complemental strand, 12582309 - 12582240
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    |||||||||||||||||  |||| || |||||||||||||||||||||||||||||||||||||||||||    
T  12582309 tttttcttgcttttctttctgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 12582240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 452 - 516
Target Start/End: Original strand, 5981156 - 5981220
Alignment:
Q  452 cttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||    
T  5981156 cttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtgaaatgacggactgtcatca 5981220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 339 - 399
Target Start/End: Original strand, 25595487 - 25595547
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  25595487 atcgtgacacgttttaaccaatgtcgaatgaacctcatcatgtgctccaaatcgtgacacg 25595547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 204 - 339
Target Start/End: Complemental strand, 45156074 - 45155944
Alignment:
Q  204 tcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaattatgttccgnnnnnnnnacacttacgttggttaactagtgtaggagta 303  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||         ||||||| ||| ||||| ||| | | |||||    
T  45156074 tcagcgtgagttaactcatgcagcgtgatttaagtcacgcatgtgtaaaaattaagttccttattttttacacttatgttagttaattagcgcaagagta 45155975  T
Q  304 ttttggtcatggcttggctgtagggcgcgagcgaaa 339  Q
    |||||||||     ||||||||||||||||||||||    
T  45155974 ttttggtca-----tggctgtagggcgcgagcgaaa 45155944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 339 - 399
Target Start/End: Original strand, 17895320 - 17895380
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||    
T  17895320 atcgtgacacgttttaaccaatgtcgaatgaacctcatcatgtgcttcaaatcgtgacacg 17895380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 25228209 - 25228149
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  25228209 atcgtaacacgttttaaccaatgtcgaatgaacctcatcatgtgctccaaatcgtgacacg 25228149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 407 - 482
Target Start/End: Original strand, 22174782 - 22174857
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaa 482  Q
    ||||||||||||||| |||||||| |||||| ||||||| | ||||||||||||||||||||||| ||||| ||||    
T  22174782 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaaacatcatgaaaa 22174857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 43682669 - 43682751
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||  ||| || | || ||||||| |||||||||||    
T  43682669 aatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgctgtttaaacttgcttatgaactcaaaa 43682751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 388 - 516
Target Start/End: Original strand, 33878110 - 33878238
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagact 486  Q
    |||||||||||| || |||||||||||||||||||||||||||||| |||  ||| || | || ||| ||||||||||| |||||||||| |||| |||     
T  33878110 aatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaaactttcttgtgaactc-aaaatatcatgaaaatgaca 33878208  T
Q  487 ctaaaaatgtggaatgacagactatcatca 516  Q
    ||||||||   ||||||| |||| ||||||    
T  33878209 ctaaaaatagtgaatgactgactgtcatca 33878238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 399
Target Start/End: Original strand, 5540798 - 5540858
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||  |||||||||||||    
T  5540798 atcgtgacacgttttaaccaatgtcgaatgaacctcatcctgtgcttcaaatcgtgacacg 5540858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 18722181 - 18722264
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaa-tcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    |||||||||||| || |||||||||||||| |||||||||||||||| |||  |||||| | |||||||| |||||||||||||    
T  18722181 aatcgtgacacgattttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaagcttgcatgtgaactcaaaa 18722264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 25592302 - 25592361
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacac 398  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| |||||    
T  25592302 atcgtaacacgttttaaccaatgtcgaatgaacctcatcatgtgctccaaatcgggacac 25592361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 25592371 - 25592454
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaa-tcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    |||||||||||| || |||||||||||||| |||||||||||||||| |||  |||||| | |||||||| |||||||||||||    
T  25592371 aatcgtgacacgattttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaagcttgcatgtgaactcaaaa 25592454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 25595556 - 25595639
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaa-tcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    |||||||||||| || |||||||||||||| |||||||||||||||| |||  |||||| | |||||||| |||||||||||||    
T  25595556 aatcgtgacacgattttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaagcttgcatgtgaactcaaaa 25595639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 178 - 257
Target Start/End: Original strand, 39872153 - 39872232
Alignment:
Q  178 tgagttaactcgcgtatgtgttaatttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaatta 257  Q
    ||||||||||| ||||  |||||||||| | ||||| ||| ||||||||||||| ||||||||| |||||||||||||||    
T  39872153 tgagttaactcacgtaaatgttaatttctgtgtgagttaactcatgcagcgtgacttaagtcacacatgtgtaaaaatta 39872232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 342 - 399
Target Start/End: Complemental strand, 20520146 - 20520089
Alignment:
Q  342 gtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    |||||||||||||| ||||||||||||||||||||| |||| || |||||||||||||    
T  20520146 gtgacacgttttaaccaatgtcgaatgaacctcatcctgtgttccaaatcgtgacacg 20520089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 425 - 482
Target Start/End: Complemental strand, 30640598 - 30640541
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaa 482  Q
    |||||||||| ||||||| |||| |||||||||||||||||||||| |||||||||||    
T  30640598 tttttcttgcatttcttgctgcttaagcttgcttgtgaactcaaaagtatcataaaaa 30640541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 407 - 470
Target Start/End: Original strand, 14589707 - 14589770
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    ||||||||||||||| |||||||| |||||| |||||||   ||||||||||||||||||||||    
T  14589707 tttcttcaaaatcttgtatttttcatgctttccttgttgtgtaagcttgcttgtgaactcaaaa 14589770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 425 - 494
Target Start/End: Complemental strand, 19793019 - 19792948
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagctt-gcttgtgaactcaaaaatatcata-aaaagactctaaaaat 494  Q
    ||||||| ||||||||||||| | || ||| |||||||||||||||||||||||| ||||||||||||||||    
T  19793019 tttttctagcttttcttgttgtttaatctttgcttgtgaactcaaaaatatcataaaaaagactctaaaaat 19792948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 399
Target Start/End: Original strand, 43682601 - 43682660
Alignment:
Q  340 tcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    |||||||||||||||| ||||||||||||||||||||| |||| || |||| ||||||||    
T  43682601 tcgtgacacgttttaaccaatgtcgaatgaacctcatcctgtgttccaaattgtgacacg 43682660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 342 - 385
Target Start/End: Original strand, 45156724 - 45156767
Alignment:
Q  342 gtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctc 385  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  45156724 gtgacacgttttaatcaatgtcgaatgaacctcatcctgtgctc 45156767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 399
Target Start/End: Original strand, 18722113 - 18722172
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||||||| | || |||||||||||||||| ||||||| |||||||||||||    
T  18722113 atcgtgacacgttttaaccgatatcgaatgaacctcatc-tgtgctccaaatcgtgacacg 18722172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 399
Target Start/End: Original strand, 33878041 - 33878101
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||||||| ||||||||||| ||||||||  |||| ||||||| ||||||||    
T  33878041 atcgtgacacgttttaaccaatgtcgaataaacctcattctgtgttctaaattgtgacacg 33878101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Complemental strand, 10663208 - 10663162
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctc 385  Q
    ||||||||||||||||| ||||||||| |||||||||| ||||||||    
T  10663208 atcgtgacacgttttaaccaatgtcgattgaacctcattatgtgctc 10663162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 35348720 - 35348676
Alignment:
Q  209 gtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaa 253  Q
    ||||| ||||||||||||||||| ||||||||||||||| |||||    
T  35348720 gtgagttaattcatgcagcgtgacttaagtcacgcatgtataaaa 35348676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 39870950 - 39870914
Alignment:
Q  228 gtgatttaagtcacgcatgtgtaaaaattatgttccg 264  Q
    |||||||||||||||||||||||||||||| ||||||    
T  39870950 gtgatttaagtcacgcatgtgtaaaaattaagttccg 39870914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 260
Target Start/End: Complemental strand, 1797809 - 1797742
Alignment:
Q  193 atgtgttaatttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaattatgt 260  Q
    |||||||||||  || ||||| ||| | | ||||||||| ||||||||| ||||||||||||||||||    
T  1797809 atgtgttaattctagggtgagttaacttacgcagcgtgacttaagtcacacatgtgtaaaaattatgt 1797742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 7130198 - 7130139
Alignment:
Q  195 gtgttaatttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    ||||| ||| ||||||||| ||| ||| ||||||||| ||||||||||||||| ||||||    
T  7130198 gtgttcattccagcgtgagttaactcacgcagcgtgacttaagtcacgcatgtataaaaa 7130139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 7130616 - 7130663
Alignment:
Q  207 gcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    ||||||| ||| ||||||||||||| |||||||||||||| |||||||    
T  7130616 gcgtgagttaactcatgcagcgtgacttaagtcacgcatgcgtaaaaa 7130663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 174 - 257
Target Start/End: Original strand, 42432010 - 42432093
Alignment:
Q  174 agcgtgagttaactcgcgtatgtgttaatttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaatta 257  Q
    |||||||||||| || || |||||||||   | ||||||| ||| ||||| ||||||| |||| |||||||| |||||||||||    
T  42432010 agcgtgagttaattcacgcatgtgttaacacctgcgtgagttaactcatgtagcgtgacttaaatcacgcatatgtaaaaatta 42432093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 42431725 - 42431681
Alignment:
Q  210 tgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    |||| ||| ||||||||| ||| ||||||||||||||||||||||    
T  42431725 tgagttaactcatgcagcatgacttaagtcacgcatgtgtaaaaa 42431681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 111; Significance: 1e-55; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 339 - 516
Target Start/End: Complemental strand, 197428 - 197242
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacggttg---------tgctttcttcaaaatcttctattttt 429  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||  ||||||||||||| ||          | ||||||||||||||||||||||||    
T  197428 atcgtgacacattttaatcaatgtcgaatgaacctcatcctgtgcttcaaatcgtgacacgttttcaacaattttactttcttcaaaatcttctattttt 197329  T
Q  430 cttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    ||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  197328 cttgcttttcttgctgcttatgcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactgtcatca 197242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 9e-50; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 339 - 516
Target Start/End: Original strand, 22937858 - 22938055
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtga--------------------cacggttgtgctttcttcaaaat 418  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||                    |||| || |||||||||||||||    
T  22937858 atcgtgacacgttttaatcaatgtcgaatgaacctcatcttgtgctccaaatcgtgatacgttttcaacaaccgtggcacgattttgctttcttcaaaat 22937957  T
Q  419 cttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  22937958 cttctatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaacgtggaatgacagactgtcatca 22938055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 388 - 516
Target Start/End: Complemental strand, 43490921 - 43490793
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactc 487  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||    
T  43490921 aatcgtgacacgattttgctttcttcaaaatcttctatttttcttgcttttcttgctgcttaagcttgtttgtgaactcaaaaatatcataaaaagactc 43490822  T
Q  488 taaaaatgtggaatgacagactatcatca 516  Q
    |||||||||| ||||||||||| ||||||    
T  43490821 taaaaatgtgaaatgacagactgtcatca 43490793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 404 - 509
Target Start/End: Complemental strand, 37214878 - 37214773
Alignment:
Q  404 tgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatga 503  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37214878 tgctttcttcaaaatcttctatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatga 37214779  T
Q  504 cagact 509  Q
    ||||||    
T  37214778 cagact 37214773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 388 - 516
Target Start/End: Complemental strand, 32837211 - 32837083
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactc 487  Q
    |||| ||||||| || ||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  32837211 aatcatgacacgattttgctttcttcaaaatcttctatttttctttcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactc 32837112  T
Q  488 taaaaatgtggaatgacagactatcatca 516  Q
    |||||||||||||||||| ||| ||||||    
T  32837111 taaaaatgtggaatgacatactgtcatca 32837083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 339 - 518
Target Start/End: Original strand, 14376658 - 14376836
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgctttt 438  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||  |||||||||||||  | ||||||| |||||||||||||||||||||| |||     
T  14376658 atcgtgacacgttttaa-caatgtcgaatgaacctcatcctgtgcttcaaatcgtgacacgaatttgctttcctcaaaatcttctatttttcttgatttc 14376756  T
Q  439 cttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagactctaaaaatgtggaatgacagactatcatcatc 518  Q
     |||||| | || ||||||||||||||| |||||||||| |||| ||| ||||||||   ||||||| |||| ||||||||    
T  14376757 tttgttgtttaaacttgcttgtgaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatcatc 14376836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 407 - 494
Target Start/End: Original strand, 14016927 - 14017014
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    ||||||||||||||| |||||||| |||||| ||||||| | |||||||||||||||||||||| |||||||||||||||||||||||    
T  14016927 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaat 14017014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 425 - 516
Target Start/End: Complemental strand, 18031801 - 18031710
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    |||||||||||||||||| |||| || ||||||| ||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  18031801 tttttcttgcttttcttgctgcttaaacttgcttttgaactcgaaaatatcataaaaagactctaaaaatatggaatgacggactatcatca 18031710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 388 - 517
Target Start/End: Complemental strand, 31863000 - 31862871
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagact 486  Q
    |||||||||||| || ||||||||||||||| ||||||||||||||||||  |||||| | |||||||||||||||||| ||||||| || |||| |||     
T  31863000 aatcgtgacacgattttgctttcttcaaaattttctatttttcttgctttctttgttgtttaagcttgcttgtgaactc-aaaatattatgaaaatgaca 31862902  T
Q  487 ctaaaaatgtggaatgacagactatcatcat 517  Q
    ||||||||  |||||||| |||| |||||||    
T  31862901 ctaaaaataaggaatgactgactgtcatcat 31862871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 425 - 517
Target Start/End: Original strand, 21336650 - 21336743
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagactctaaaaatgtggaatgacagactatcatcat 517  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||   ||||||| |||| |||||||    
T  21336650 tttttcttgcttttcttgttgcttaagcttgcttgtgaactcaaaaatataataaaaaagactctaaaaatagtgaatgactgactgtcatcat 21336743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 407 - 494
Target Start/End: Complemental strand, 17747726 - 17747639
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    ||||||||||||||| |||||||| |||||| ||||||| | |||||| ||| ||||||||||| |||||||||||||||||||||||    
T  17747726 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagctttcttatgaactcaaaattatcataaaaagactctaaaaat 17747639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 424 - 494
Target Start/End: Original strand, 28788309 - 28788379
Alignment:
Q  424 atttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    |||||||||| |||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  28788309 atttttcttgtttttcttgctgcttaagcttgcttgtgaactaaaaaatatcataaaaagactctaaaaat 28788379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 425 - 494
Target Start/End: Complemental strand, 39191422 - 39191353
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    ||||||||| |||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  39191422 tttttcttgtttttcttgctgcttaagcttgcttgtgaactcaaaagtatcataaaaagactctaaaaat 39191353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 425 - 516
Target Start/End: Original strand, 21827949 - 21828041
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    |||||||||||||||||| |||| ||||||||||| ||||||||||||||||| |||||||||||||||||   ||||||| |||| ||||||    
T  21827949 tttttcttgcttttcttgctgcttaagcttgcttgcgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatca 21828041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 435 - 497
Target Start/End: Complemental strand, 2836761 - 2836699
Alignment:
Q  435 ttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtg 497  Q
    |||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2836761 ttttcttgctgcttaagtttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtg 2836699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 339 - 397
Target Start/End: Original strand, 21336524 - 21336582
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgaca 397  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  21336524 atcgtgacacgttttaaccaatgtcgaatgaacctcatcctgtgctctaaatcgtgaca 21336582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 425 - 494
Target Start/End: Original strand, 40916795 - 40916867
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat---aaaaagactctaaaaat 494  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| ||   |||||||||||||||||    
T  40916795 tttttcttgcttttcttgttgcttaagcttgcttgtgaactcaaaaatatgataaaaaaaagactctaaaaat 40916867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 388 - 470
Target Start/End: Complemental strand, 42061614 - 42061532
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    |||||||||||| || |||||||||||||||||||||||||||||| |||  ||| || | ||||||||||||||||||||||    
T  42061614 aatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaagcttgcttgtgaactcaaaa 42061532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 452 - 517
Target Start/End: Complemental strand, 7270305 - 7270240
Alignment:
Q  452 cttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactatcatcat 517  Q
    |||||||||||||||||||||||||||||||||||||||||||   |||||||||||| |||||||    
T  7270305 cttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgacagactgtcatcat 7270240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 339 - 399
Target Start/End: Original strand, 21827823 - 21827883
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||    
T  21827823 atcgtgacacgttttaaccaatgtcgaatgaacctcatcctgtgttctaaatcgtgacacg 21827883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 31863069 - 31863009
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  31863069 atcgtgacacgatttaaacaatgtcgaatgaacttcatcatgtgctctaaatcgtgacacg 31863009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 425 - 492
Target Start/End: Original strand, 4100346 - 4100413
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaa 492  Q
    |||| ||||||||||||| |||| || ||||| |||||||||||||||||||||||||||||||||||    
T  4100346 ttttccttgcttttcttgctgcttaatcttgcctgtgaactcaaaaatatcataaaaagactctaaaa 4100413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 171 - 254
Target Start/End: Original strand, 25994907 - 25994990
Alignment:
Q  171 accagcgtgagttaactcgcgtatgtgttaatttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    |||||||||||||||||| || | |||||||||   ||||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  25994907 accagcgtgagttaactcacgcaagtgttaattctcgcgtgagttaactcatgcagcgtgacttaagtcacgcatgtgtaaaaa 25994990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 435 - 494
Target Start/End: Complemental strand, 30065643 - 30065584
Alignment:
Q  435 ttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    ||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||    
T  30065643 ttttcttgttgcttaatcttgcttgtgaattcaaaaatatcataaaaagactctaaaaat 30065584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 42061683 - 42061623
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||  |||||||||||||    
T  42061683 atcgtgacacgatttaaccaatgtcgaatgaacctcatcatgtgcttcaaatcgtgacacg 42061623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 175 - 254
Target Start/End: Original strand, 14410734 - 14410813
Alignment:
Q  175 gcgtgagttaactcgcgtatgtgttaatttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    |||||||||||||| || | |||||||||||||| |||| ||| ||| ||||||||| ||||||||| ||||||||||||    
T  14410734 gcgtgagttaactcacgcacgtgttaatttcagcatgagttaactcacgcagcgtgacttaagtcacacatgtgtaaaaa 14410813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 175 - 254
Target Start/End: Complemental strand, 25994632 - 25994553
Alignment:
Q  175 gcgtgagttaactcgcgtatgtgttaatttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    |||||||||||||| || | ||||||||||| ||||||| ||| ||| || |||||| ||||||||||||||||||||||    
T  25994632 gcgtgagttaactcacgcaggtgttaatttctgcgtgagttaactcaggcggcgtgacttaagtcacgcatgtgtaaaaa 25994553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 343 - 397
Target Start/End: Complemental strand, 37214959 - 37214905
Alignment:
Q  343 tgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgaca 397  Q
    ||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||    
T  37214959 tgacacgttttaaccaatgtcgaatgaacctcatcctgtgctccaaatcgtgaca 37214905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 425 - 482
Target Start/End: Original strand, 2837584 - 2837641
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaa 482  Q
    |||||||||||||| ||| |||| |||||||||||||||||| |||||||||||||||    
T  2837584 tttttcttgcttttattgctgcttaagcttgcttgtgaactccaaaatatcataaaaa 2837641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 516
Target Start/End: Original strand, 28442053 - 28442181
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagact 486  Q
    |||||||||||  || |||||||||||||||||| ||||||||||| |||  ||| || | || ||||||||||||||| |||||||||| |||| |||     
T  28442053 aatcgtgacacaattttgctttcttcaaaatcttatatttttcttgttttctttgctgtttaaacttgcttgtgaactc-aaaatatcatgaaaatgaca 28442151  T
Q  487 ctaaaaatgtggaatgacagactatcatca 516  Q
    ||||||||   ||||||| |||| ||||||    
T  28442152 ctaaaaatagtgaatgactgactgtcatca 28442181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 407 - 470
Target Start/End: Complemental strand, 7624366 - 7624303
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    ||||||||||||||| |||||||| |||||| ||||||| | |||||||| |||||||||||||    
T  7624366 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcctgtgaactcaaaa 7624303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 177 - 254
Target Start/End: Original strand, 17854694 - 17854771
Alignment:
Q  177 gtgagttaactcgcgtatgtgttaatttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    |||||||||||| |  | ||||||||||||||||||| ||| ||| |||| ||||  |||||||||||||||||||||    
T  17854694 gtgagttaactcacacaagtgttaatttcagcgtgagttaactcacgcagtgtgacctaagtcacgcatgtgtaaaaa 17854771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 399
Target Start/End: Original strand, 28441988 - 28442044
Alignment:
Q  343 tgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||  |||||| || ||||||||||| |||||||||||||||||||||    
T  28441988 tgacacgttttagccaatgttgagtgaacctcatcctgtgctctaaatcgtgacacg 28442044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 399
Target Start/End: Original strand, 28788203 - 28788263
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||||||| ||||||||||| ||||||||| | || || |||||||||||||    
T  28788203 atcgtgacacgttttaaccaatgtcgaataaacctcatcctatgttccaaatcgtgacacg 28788263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 171 - 254
Target Start/End: Original strand, 26093001 - 26093084
Alignment:
Q  171 accagcgtgagttaactcgcgtatgtgttaatttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    |||||||||| ||||||| || | ||||||||| | |||| || |||||||| | |||||| ||||||||| ||||||||||||    
T  26093001 accagcgtgacttaactcacgcacgtgttaattcctgcgtaagttaattcatacggcgtgacttaagtcacacatgtgtaaaaa 26093084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 169 - 254
Target Start/End: Complemental strand, 25868200 - 25868115
Alignment:
Q  169 aaaccagcgtgagttaactcgcgtatgtgttaatttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    |||||||||| ||||||||| || | |||||||     ||||||| ||| ||||||||||||| ||||||||| ||||||||||||    
T  25868200 aaaccagcgttagttaactcacgcacgtgttaacacatgcgtgagttaactcatgcagcgtgacttaagtcacacatgtgtaaaaa 25868115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 254
Target Start/End: Complemental strand, 26092657 - 26092580
Alignment:
Q  177 gtgagttaactcgcgtatgtgttaatttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    |||||||||||| || | ||||||||||| ||||||| ||| ||||||  | ||| |||||||||||| |||||||||    
T  26092657 gtgagttaactctcgcaggtgttaatttctgcgtgagttaactcatgcgacatgacttaagtcacgcaagtgtaaaaa 26092580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 254
Target Start/End: Original strand, 25868504 - 25868551
Alignment:
Q  207 gcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    ||||||| ||| | ||||||||||| ||||||||||||||||||||||    
T  25868504 gcgtgagttaacttatgcagcgtgacttaagtcacgcatgtgtaaaaa 25868551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 339 - 385
Target Start/End: Complemental strand, 32837280 - 32837234
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctc 385  Q
    ||||||||||||||||| |||||||||||||| |||||| | |||||    
T  32837280 atcgtgacacgttttaaccaatgtcgaatgaaactcatcctatgctc 32837234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 254
Target Start/End: Complemental strand, 6408682 - 6408649
Alignment:
Q  221 atgcagcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    ||||||||||| ||||||||||||||||||||||    
T  6408682 atgcagcgtgacttaagtcacgcatgtgtaaaaa 6408649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 342 - 399
Target Start/End: Complemental strand, 39191525 - 39191468
Alignment:
Q  342 gtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    |||||||||||||| |||| |||||| ||||||||| ||| || ||||| ||||||||    
T  39191525 gtgacacgttttaaccaatatcgaataaacctcatcctgtactttaaattgtgacacg 39191468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 339 - 371
Target Start/End: Original strand, 21333508 - 21333540
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaac 371  Q
    ||||||||||||||||| |||||||||||||||    
T  21333508 atcgtgacacgttttaaccaatgtcgaatgaac 21333540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 9e-50; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 388 - 516
Target Start/End: Original strand, 16185528 - 16185656
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactc 487  Q
    |||||||||||| || |||||||||||||||||| |||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||    
T  16185528 aatcgtgacacgattttgctttcttcaaaatcttatatttttcttgcttttcttgctgcttaagcttgtttgtgaactcaaaaatatcataaaaagactc 16185627  T
Q  488 taaaaatgtggaatgacagactatcatca 516  Q
    |||||||||||||||||||||| ||||||    
T  16185628 taaaaatgtggaatgacagactgtcatca 16185656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 388 - 517
Target Start/End: Complemental strand, 35411805 - 35411675
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactc 487  Q
    |||||||||||| || |||||||||||||||||||||||||||||  |||||||| |||| ||| |||||||||||||||||||||||||||||||||||    
T  35411805 aatcgtgacacgattttgctttcttcaaaatcttctatttttctttgttttcttgctgcttaagtttgcttgtgaactcaaaaatatcataaaaagactc 35411706  T
Q  488 taaaaatg-tggaatgacagactatcatcat 517  Q
    |||||||| || ||||||||||| |||||||    
T  35411705 taaaaatgttgaaatgacagactgtcatcat 35411675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 407 - 516
Target Start/End: Original strand, 19302255 - 19302364
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacag 506  Q
    ||||||||||||||||||||||||| ||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||| || |||||| |    
T  19302255 tttcttcaaaatcttctatttttctcgctttccttgttgtttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatatgaaatgacgg 19302354  T
Q  507 actatcatca 516  Q
    ||||||||||    
T  19302355 actatcatca 19302364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 339 - 432
Target Start/End: Original strand, 55032740 - 55032833
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacggttgtgctttcttcaaaatcttctatttttctt 432  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||| || |||||||||||||||||||||||||||||    
T  55032740 atcgtgacacgttttaaccaatgtcgaatgaacctcatcatgtgcttcaaatcgtgacacgattttgctttcttcaaaatcttctatttttctt 55032833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 425 - 515
Target Start/End: Complemental strand, 9380102 - 9380012
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactatcatc 515  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||| |||||    
T  9380102 tttttcttgcttttcttattgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgactgactgtcatc 9380012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 418 - 504
Target Start/End: Complemental strand, 31548649 - 31548563
Alignment:
Q  418 tcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgac 504  Q
    ||||| ||||||||||||||||||  |||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31548649 tcttcaatttttcttgcttttcttactgcttaagcttggttgtgaactcaaaaatatcataaaaagactctaaaaatgtgaaatgac 31548563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 426 - 516
Target Start/End: Original strand, 34984668 - 34984758
Alignment:
Q  426 ttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||   ||||||| |||| ||||||    
T  34984668 ttttcttgcttttcttgttgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaataacgaatgactgactgtcatca 34984758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 425 - 516
Target Start/End: Complemental strand, 53815062 - 53814971
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    ||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||| ||||||    
T  53815062 tttttcttgtttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatca 53814971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 426 - 516
Target Start/End: Complemental strand, 54460457 - 54460367
Alignment:
Q  426 ttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    ||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||   ||||||| |||| ||||||    
T  54460457 ttttctttcttttcttgttgcttaagattgcttgtgaactcaaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatca 54460367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 425 - 494
Target Start/End: Complemental strand, 16243257 - 16243188
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    |||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||    
T  16243257 tttttcttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 16243188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 425 - 494
Target Start/End: Original strand, 54736759 - 54736828
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  54736759 ttttttttgcttttcttgttgcttaagcttgcttgtgaactcaaaagtatcataaaaagactctaaaaat 54736828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 418 - 516
Target Start/End: Original strand, 29344674 - 29344773
Alignment:
Q  418 tcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataa-aaagactctaaaaatgtggaatgacagactatcatca 516  Q
    ||||| ||||||||||||||||||| |||| || |||||||||||||||||||||||||||| |||||||||||||||   ||||||| |||| ||||||    
T  29344674 tcttcaatttttcttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataagaaagactctaaaaatagtgaatgactgactgtcatca 29344773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 424 - 494
Target Start/End: Complemental strand, 43808970 - 43808900
Alignment:
Q  424 atttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    |||||| |||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||    
T  43808970 attttttttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 43808900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 339 - 470
Target Start/End: Complemental strand, 52198502 - 52198351
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacac--------------------ggttgtgctttcttcaaaat 418  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||                    | || |||||||||||||||    
T  52198502 atcgtgacacattttaaccaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacgttttcaacaatcgtgacatgattttgctttcttcaaaat 52198403  T
Q  419 cttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    |||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  52198402 cttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcaaaa 52198351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 388 - 516
Target Start/End: Complemental strand, 538143 - 538015
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagact 486  Q
    |||||||||||| || |||||||||||||||||||||||||||||| |||  ||| || | || |||| |||||||||| |||||||||| |||||||||    
T  538143 aatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaaacttgtttgtgaactc-aaaatatcatgaaaaagact 538045  T
Q  487 ctaaaaatgtggaatgacagactatcatca 516  Q
    ||||||||   ||||||| |||| ||||||    
T  538044 ctaaaaatagtgaatgactgactgtcatca 538015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 429 - 494
Target Start/End: Complemental strand, 10880863 - 10880798
Alignment:
Q  429 tcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    |||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||    
T  10880863 tcttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 10880798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 414 - 503
Target Start/End: Original strand, 19305445 - 19305534
Alignment:
Q  414 aaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatga 503  Q
    |||| ||||||||||||| ||||| |||| || | |||||||||||||||||||||||||| ||||||||||||||||||| || |||||    
T  19305445 aaaaacttctatttttctcgctttccttgctgtttaagcttgcttgtgaactcaaaaatattataaaaagactctaaaaatatgaaatga 19305534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 388 - 516
Target Start/End: Original strand, 23299425 - 23299553
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagact 486  Q
    |||||||||||| || |||||||||||||||||||||||| ||||| |||  ||| || | || ||||||||||||||| |||||||||| |||||||||    
T  23299425 aatcgtgacacgattttgctttcttcaaaatcttctatttctcttgttttctttgctgtttaaacttgcttgtgaactc-aaaatatcatgaaaaagact 23299523  T
Q  487 ctaaaaatgtggaatgacagactatcatca 516  Q
    ||||||||   ||||||| |||| ||||||    
T  23299524 ctaaaaatagtgaatgactgactgtcatca 23299553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 406 - 516
Target Start/End: Complemental strand, 3839903 - 3839790
Alignment:
Q  406 ctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat---aaaaagactctaaaaatgtggaatg 502  Q
    ||||||||||  |||||  |||||||||||||||||| |||| |||||||||||||||||||||||||||||   ||||| |||||||||||   |||||    
T  3839903 ctttcttcaatttcttcggtttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcattaaaaaaaaactctaaaaatagtgaatg 3839804  T
Q  503 acagactatcatca 516  Q
    || |||| ||||||    
T  3839803 actgactgtcatca 3839790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 391 - 470
Target Start/End: Original strand, 10107489 - 10107568
Alignment:
Q  391 cgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    ||||||||| || |||||||||||||||||||||||||||||| |||  |||||| | ||||||||||||||||||||||    
T  10107489 cgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgttgtttaagcttgcttgtgaactcaaaa 10107568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 388 - 516
Target Start/End: Complemental strand, 10884146 - 10884018
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagact 486  Q
    |||||||||||| || |||||||||| ||||||||||||||| ||| |||  ||| || | || ||||||||||||||| |||||||||| |||||||||    
T  10884146 aatcgtgacacgattttgctttcttcgaaatcttctattttttttgttttcattgctgtttaaacttgcttgtgaactc-aaaatatcatgaaaaagact 10884048  T
Q  487 ctaaaaatgtggaatgacagactatcatca 516  Q
    ||||||||   ||||||| |||| ||||||    
T  10884047 ctaaaaatagtgaatgactgactgtcatca 10884018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 339 - 399
Target Start/End: Original strand, 6445464 - 6445524
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||    
T  6445464 atcgtgacacgttttaaccaatgtcgaatgaacctcatcatgtgcttcaaatcgtgacacg 6445524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 388 - 516
Target Start/End: Complemental strand, 6922018 - 6921890
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagact 486  Q
    |||||||||||| || |||||||||||||||||| ||||| ||||| |||  ||| || | || ||||||||||||||| |||||||||| |||||| ||    
T  6922018 aatcgtgacacgattttgctttcttcaaaatcttatatttctcttgttttctttgctgtttaaacttgcttgtgaactc-aaaatatcatgaaaaaggct 6921920  T
Q  487 ctaaaaatgtggaatgacagactatcatca 516  Q
    ||||||||   ||||||| |||| ||||||    
T  6921919 ctaaaaatagtgaatgactgactgtcatca 6921890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 6922087 - 6922027
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||||| | |||||| |||||||||||||||||||||| |||||||||||||    
T  6922087 atcgtgacacgttttcaccaatgttgaatgaacctcatcatgtgctccaaatcgtgacacg 6922027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 425 - 517
Target Start/End: Complemental strand, 41976412 - 41976320
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactatcatcat 517  Q
    ||||| |||||||||||| || | || ||||||||||||||||||||||| ||||||| |||||||||||   ||||||| |||| |||||||    
T  41976412 tttttgttgcttttcttgctgtttaatcttgcttgtgaactcaaaaatattataaaaacactctaaaaatagcgaatgactgactgtcatcat 41976320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 339 - 385
Target Start/End: Original strand, 23299356 - 23299402
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctc 385  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  23299356 atcgtgacacgttttaatcaatgtcgaatgaacctcatcttgtgctc 23299402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 465
Target Start/End: Original strand, 18645613 - 18645690
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaact 465  Q
    |||||||||||| || |||||||||||||||||||||||||||||| |||  ||| || | ||||||| |||||||||    
T  18645613 aatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaagcttgtttgtgaact 18645690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 398
Target Start/End: Complemental strand, 28265196 - 28265139
Alignment:
Q  341 cgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacac 398  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||  ||||||||||||    
T  28265196 cgtgacacgttttaaccaatgtcgaatgaacttcatcatgtgcttcaaatcgtgacac 28265139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 339 - 399
Target Start/End: Original strand, 18645544 - 18645604
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||| ||||| ||||||||||||||||||||| ||||||  |||||||||||||    
T  18645544 atcgtgacacgatttaaccaatgtcgaatgaacctcatcctgtgcttcaaatcgtgacacg 18645604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 343 - 397
Target Start/End: Complemental strand, 10884211 - 10884157
Alignment:
Q  343 tgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgaca 397  Q
    ||||||||||||||||||||||||||||||| ||| ||||||  |||||||||||    
T  10884211 tgacacgttttaatcaatgtcgaatgaacctaatcctgtgcttcaaatcgtgaca 10884157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 435 - 516
Target Start/End: Original strand, 20729395 - 20729477
Alignment:
Q  435 ttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    |||||||| |||| ||||||||||||||||| ||||||||||| ||||| |||||||||||   ||||||| |||| ||||||    
T  20729395 ttttcttgctgcttaagcttgcttgtgaactaaaaaatatcataaaaaaaactctaaaaatagcgaatgactgactgtcatca 20729477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 538212 - 538152
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||| ||||||||||| ||||||||||||||| ||||  ||||||| |||||||||||||    
T  538212 atcgtaacacgttttaaccaatgtcgaatgaacttcattctgtgctccaaatcgtgacacg 538152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 391
Target Start/End: Original strand, 17532520 - 17532572
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatc 391  Q
    ||||||||||||||||| |||| |||||||||||||||| ||||||| |||||    
T  17532520 atcgtgacacgttttaaccaatatcgaatgaacctcatcctgtgctcaaaatc 17532572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 175 - 254
Target Start/End: Original strand, 16280913 - 16280992
Alignment:
Q  175 gcgtgagttaactcgcgtatgtgttaatttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    |||||||||||||| |  | ||||||||||| ||||||| ||| ||| || |||||| |||||||||||| |||||||||    
T  16280913 gcgtgagttaactcacccaagtgttaatttcggcgtgagttaactcacgcggcgtgacttaagtcacgcaagtgtaaaaa 16280992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 389
Target Start/End: Original strand, 16185459 - 16185509
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaa 389  Q
    ||||||||||||||||  ||||||||| ||||||||||| |||||||||||    
T  16185459 atcgtgacacgttttagccaatgtcgagtgaacctcatcctgtgctctaaa 16185509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 470
Target Start/End: Original strand, 17532565 - 17532623
Alignment:
Q  412 tcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    |||||||||||| ||||||||| |||  |||||| | ||||||||||||||||||||||    
T  17532565 tcaaaatcttctttttttcttgttttctttgttgtttaagcttgcttgtgaactcaaaa 17532623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 218 - 254
Target Start/End: Original strand, 4041044 - 4041080
Alignment:
Q  218 ttcatgcagcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    |||||||||||||| ||||||||||||||||||||||    
T  4041044 ttcatgcagcgtgacttaagtcacgcatgtgtaaaaa 4041080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 257
Target Start/End: Complemental strand, 45003414 - 45003382
Alignment:
Q  225 agcgtgatttaagtcacgcatgtgtaaaaatta 257  Q
    |||||||||||||||||||||||||||||||||    
T  45003414 agcgtgatttaagtcacgcatgtgtaaaaatta 45003382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 53815169 - 53815109
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    |||||||||| |||||| ||||||||||||||||||||| | || |  |||||||||||||    
T  53815169 atcgtgacacattttaaccaatgtcgaatgaacctcatcctatgtttcaaatcgtgacacg 53815109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 399
Target Start/End: Original strand, 22994412 - 22994455
Alignment:
Q  356 tcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||| ||||||| |||||||| |||||||||||||    
T  22994412 tcaatgtcgaatgcacctcattatgtgctccaaatcgtgacacg 22994455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 382
Target Start/End: Complemental strand, 35411874 - 35411831
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtg 382  Q
    |||||||||| |||||| ||||||||||||||||||||| ||||    
T  35411874 atcgtgacacattttaaccaatgtcgaatgaacctcatcctgtg 35411831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 30478533 - 30478487
Alignment:
Q  207 gcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaa 253  Q
    ||||||| ||| |||||| |||| |||||||||||||||||||||||    
T  30478533 gcgtgagttaactcatgcggcgttatttaagtcacgcatgtgtaaaa 30478487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 97; Significance: 2e-47; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 404 - 508
Target Start/End: Original strand, 246238 - 246342
Alignment:
Q  404 tgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatga 503  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  246238 tgctttcttcaaaatcttctatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatga 246337  T
Q  504 cagac 508  Q
    |||||    
T  246338 cagac 246342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 291160 - 291100
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||||||| ||||||||||||||||| ||| ||||||| |||||||||||||    
T  291160 atcgtgacacgttttaaccaatgtcgaatgaaccttatcctgtgctccaaatcgtgacacg 291100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 388 - 494
Target Start/End: Complemental strand, 291091 - 290985
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagact 486  Q
    |||||||||||   | ||||||| |||||||||||||||||||||| |||  |||||| | || ||||||||||||||  |||||||||| |||| |||     
T  291091 aatcgtgacacaaatttgctttcctcaaaatcttctatttttcttgttttctttgttgtttaaacttgcttgtgaact-taaaatatcatgaaaatgaca 290993  T
Q  487 ctaaaaat 494  Q
    ||||||||    
T  290992 ctaaaaat 290985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 2e-47; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 388 - 516
Target Start/End: Complemental strand, 9953164 - 9953036
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactc 487  Q
    |||||||||| | || |||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  9953164 aatcgtgacatgattttgctttcttcaaaatcttctatttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactc 9953065  T
Q  488 taaaaatgtggaatgacagactatcatca 516  Q
    |||||||||| ||||||||||| ||||||    
T  9953064 taaaaatgtgaaatgacagactgtcatca 9953036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 407 - 482
Target Start/End: Complemental strand, 13004509 - 13004434
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaa 482  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  13004509 tttcttcaaaatcttctatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaa 13004434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 425 - 494
Target Start/End: Complemental strand, 10289277 - 10289208
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||    
T  10289277 tttttcttgcttttcttgttgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 10289208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 435 - 516
Target Start/End: Original strand, 28666095 - 28666176
Alignment:
Q  435 ttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||| ||||||    
T  28666095 ttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaataacgaatgactgactgtcatca 28666176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 339 - 399
Target Start/End: Original strand, 23379616 - 23379676
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  23379616 atcgtgacacgttttaatcaatgtcgagtgaacctcatcatgtgctccaaatcgtgacacg 23379676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 339 - 399
Target Start/End: Original strand, 23388955 - 23389015
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  23388955 atcgtgacacgttttaatcaatgtcgagtgaacctcatcatgtgctccaaatcgtgacacg 23389015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 32879775 - 32879699
Alignment:
Q  178 tgagttaactcgcgtatgtgttaatttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    ||||||||||| || ||||||||||||||||||||| ||| ||| ||||||||| |||||||||||| |||||||||    
T  32879775 tgagttaactcacgcatgtgttaatttcagcgtgagttaactcacgcagcgtgacttaagtcacgcaagtgtaaaaa 32879699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 388 - 516
Target Start/End: Original strand, 5739061 - 5739190
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat--aaaaagac 485  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||  ||| || | |  ||||||||||||||| || |||||||  ||||| ||    
T  5739061 aatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgctgtttagacttgcttgtgaactc-aacatatcatgaaaaaaaac 5739159  T
Q  486 tctaaaaatgtggaatgacagactatcatca 516  Q
    |||||||||   ||||||| |||| ||||||    
T  5739160 tctaaaaatagtgaatgactgactgtcatca 5739190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 388 - 482
Target Start/End: Complemental strand, 2371541 - 2371448
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaa 482  Q
    |||||||| ||| || |||||||||||||||||||||||||||||| |||  ||| || | || ||||||| ||||||| |||||||||||||||    
T  2371541 aatcgtgatacgattttgctttcttcaaaatcttctatttttcttgttttatttgctgtttaaacttgcttatgaactc-aaaatatcataaaaa 2371448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 23379685 - 23379768
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaa-tcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    |||||||||||  || |||||||||||||| |||||||||||||||| |||  |||||| | |||||||| |||||||||||||    
T  23379685 aatcgtgacacaattttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaagcttgcatgtgaactcaaaa 23379768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 407 - 470
Target Start/End: Complemental strand, 31071603 - 31071540
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    ||||||||||||||| |||||||| |||||| ||||||| | ||||||||| ||||||||||||    
T  31071603 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgctcgtgaactcaaaa 31071540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 339 - 397
Target Start/End: Original strand, 5738992 - 5739050
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgaca 397  Q
    |||||||| |||||||| ||||||||||||||||||||| | ||||| |||||||||||    
T  5738992 atcgtgacgcgttttaaccaatgtcgaatgaacctcatcctttgctccaaatcgtgaca 5739050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 449 - 494
Target Start/End: Complemental strand, 20181340 - 20181295
Alignment:
Q  449 aagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||    
T  20181340 aagcttgcttgtgaactcaaaaatatcacaaaaggactctaaaaat 20181295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 449 - 494
Target Start/End: Original strand, 22154651 - 22154696
Alignment:
Q  449 aagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||    
T  22154651 aagcttgcttgtgaactcaaaaatatcacaaaaggactctaaaaat 22154696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 391
Target Start/End: Complemental strand, 2371606 - 2371558
Alignment:
Q  343 tgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatc 391  Q
    ||||||||||||| |||||||||||||||||| || |||||||||||||    
T  2371606 tgacacgttttaaccaatgtcgaatgaacctcgtcctgtgctctaaatc 2371558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 418 - 466
Target Start/End: Original strand, 12991556 - 12991604
Alignment:
Q  418 tcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactc 466  Q
    ||||| |||||||||||||||||||||| | ||||||||||||||||||    
T  12991556 tcttcaatttttcttgcttttcttgttgattaagcttgcttgtgaactc 12991604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 34501611 - 34501551
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||||||   |||||||||||||||||||| | ||||| |||||||||||||    
T  34501611 atcgtgacacgttttagctaatgtcgaatgaacctcatcctatgctccaaatcgtgacacg 34501551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 23389024 - 23389107
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaa-tcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    |||||||||||  || |||||||||||||| |||||||||||||||| |||  ||| || | |||||||| |||||||||||||    
T  23389024 aatcgtgacacaattttgctttcttcaaaaatcttctatttttcttgttttctttgctgtttaagcttgcatgtgaactcaaaa 23389107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Complemental strand, 9953233 - 9953187
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctc 385  Q
    ||||||||||||||||| ||||||||||||||||||||  |||||||    
T  9953233 atcgtgacacgttttaaccaatgtcgaatgaacctcattctgtgctc 9953187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 26622233 - 26622313
Alignment:
Q  177 gtgagttaactcgcgtatgtgttaatttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaatta 257  Q
    |||||||||||| || | ||||||||||||||| ||| ||| | | ||||| ||||||| ||||| |||||||||| ||||    
T  26622233 gtgagttaactcacgcaggtgttaatttcagcgcgagttaacttacgcagcatgatttatgtcacacatgtgtaaagatta 26622313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 257
Target Start/End: Original strand, 26728211 - 26728291
Alignment:
Q  177 gtgagttaactcgcgtatgtgttaatttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaatta 257  Q
    |||||||||||| || | ||||||||||||||| ||| ||| | | ||||| ||||||| ||||| |||||||||| ||||    
T  26728211 gtgagttaactcacgcaggtgttaatttcagcgcgagttaacttacgcagcatgatttatgtcacacatgtgtaaagatta 26728291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 388 - 468
Target Start/End: Complemental strand, 34501542 - 34501462
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaa 468  Q
    |||||||||||  || ||||||| |||||||||||| ||||||||| |||  ||| || | || |||||||||||||||||    
T  34501542 aatcgtgacacaattttgctttcatcaaaatcttctttttttcttgttttctttgctgtttaaacttgcttgtgaactcaa 34501462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 470
Target Start/End: Original strand, 28112641 - 28112704
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    |||||||||||||||| | ||||| |||||| |||| |  | ||||||||||||||||||||||    
T  28112641 tttcttcaaaatcttcaacttttcatgctttccttgctttttaagcttgcttgtgaactcaaaa 28112704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 31778884 - 31778837
Alignment:
Q  206 agcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaa 253  Q
    |||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  31778884 agcgtgagttaactcatgcggcgtgacttaagtcacgcatgtgtaaaa 31778837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 470
Target Start/End: Complemental strand, 6512503 - 6512442
Alignment:
Q  409 tcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    |||||||||||||| | ||||| || ||| |||| || | ||||||||||||||||||||||    
T  6512503 tcttcaaaatcttcaacttttcatgttttccttgctgtttaagcttgcttgtgaactcaaaa 6512442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 466
Target Start/End: Original strand, 13022190 - 13022231
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactc 466  Q
    |||||| |||||||||||||| | ||||||||||||||||||    
T  13022190 tttttcatgcttttcttgttgtttaagcttgcttgtgaactc 13022231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 30746502 - 30746547
Alignment:
Q  208 cgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaa 253  Q
    |||||| ||| |||| |||||||| |||||||||||||||||||||    
T  30746502 cgtgagttaaatcatacagcgtgacttaagtcacgcatgtgtaaaa 30746547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 97; Significance: 2e-47; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 404 - 508
Target Start/End: Complemental strand, 14571138 - 14571034
Alignment:
Q  404 tgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatga 503  Q
    ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14571138 tgctttcttcaaaatcttctatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatga 14571039  T
Q  504 cagac 508  Q
    |||||    
T  14571038 cagac 14571034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 388 - 517
Target Start/End: Complemental strand, 5680597 - 5680468
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactc 487  Q
    |||||||||| | || |||||| ||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||    
T  5680597 aatcgtgacatgattttgcttttttcaaaatcttctatttttcttgcttttcttgttgtttaagcttgcttatgaactcaaaaatatcataaaaagactc 5680498  T
Q  488 taaaaatgtggaatgacagactatcatcat 517  Q
    ||||||||||||||||||| || |||||||    
T  5680497 taaaaatgtggaatgacagtctgtcatcat 5680468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 339 - 470
Target Start/End: Original strand, 37104064 - 37104195
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgctttt 438  Q
    ||||||||||| ||||| ||||||||||||||||||||| ||||||  ||||||||||||| || |||||||||||||||||||||||||||||| |||     
T  37104064 atcgtgacacgatttaaccaatgtcgaatgaacctcatcctgtgcttcaaatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttc 37104163  T
Q  439 cttgttgctaaagcttgcttgtgaactcaaaa 470  Q
     ||| || | ||||||||||||||||||||||    
T  37104164 tttgctgtttaagcttgcttgtgaactcaaaa 37104195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 407 - 494
Target Start/End: Complemental strand, 29324088 - 29324001
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    ||||||||||||||| |||||||| |||||| ||||||| | |||||||||||||||||||||| |||||||||||||||||||||||    
T  29324088 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaat 29324001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 407 - 494
Target Start/End: Original strand, 44809795 - 44809882
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    ||||||||||||||| |||||||| |||||| ||||||| | |||||||||||||||||||||| |||||||||||||||||||||||    
T  44809795 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaat 44809882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 425 - 494
Target Start/End: Complemental strand, 3718427 - 3718358
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||    
T  3718427 tttttcttgcttttcttgttgcttaagcttgcttgtgaactcaaaaatatcataaaaatactctaaaaat 3718358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 425 - 494
Target Start/End: Complemental strand, 40794283 - 40794214
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  40794283 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 40794214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 388 - 516
Target Start/End: Complemental strand, 49269863 - 49269735
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactc 487  Q
    |||||||| ||| || ||||||||||||||||||||||||||||||||||  |||  | | ||||||| |||  ||||||||||||||||||||| ||||    
T  49269863 aatcgtgatacgattttgctttcttcaaaatcttctatttttcttgctttctttgccgtttaagcttgtttgctaactcaaaaatatcataaaaaaactc 49269764  T
Q  488 taaaaatgtggaatgacagactatcatca 516  Q
    |||||||||  |||||| |||| ||||||    
T  49269763 taaaaatgtaaaatgactgactgtcatca 49269735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 425 - 515
Target Start/End: Complemental strand, 21419070 - 21418980
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactatcatc 515  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||   ||||||| ||| ||||||    
T  21419070 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagacactaaaaatagcgaatgactgacaatcatc 21418980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 339 - 516
Target Start/End: Complemental strand, 18910801 - 18910604
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtga--------------------cacggttgtgctttcttcaaaat 418  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||                    |||| || |||||||||||||||    
T  18910801 atcgtgacacgttttaaccaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacgttttcaacaatcgtgacacgattttgctttcttcaaaat 18910702  T
Q  419 cttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    |||||||||||||||||||  |||||| | ||| |||||||||||||| |||||||||| |||| ||| ||||||||   ||||||| |||| ||||||    
T  18910701 cttctatttttcttgctttctttgttgtttaagtttgcttgtgaactc-aaaatatcatgaaaatgacactaaaaatagtgaatgactgactgtcatca 18910604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 425 - 516
Target Start/End: Complemental strand, 27013321 - 27013229
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcata-aaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||   ||||||| |||| ||||||    
T  27013321 tttttcttgcttttcttgttgcttaagcttgcctgtgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatca 27013229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 410 - 494
Target Start/End: Original strand, 34320738 - 34320822
Alignment:
Q  410 cttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    |||||||||||| |||||||| |||||| ||| ||| | |||||||||||||||||||||| |||||||||||||||||||||||    
T  34320738 cttcaaaatcttgtatttttcatgctttccttattgtttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaat 34320822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 425 - 516
Target Start/End: Complemental strand, 12782197 - 12782106
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    |||||||||||||||||| |||| |||||||||||| |||||||||||||||||||| ||||||||||||   ||||||| |||| ||||||    
T  12782197 tttttcttgcttttcttgctgcttaagcttgcttgtaaactcaaaaatatcataaaatgactctaaaaatagcgaatgactgactgtcatca 12782106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 388 - 470
Target Start/End: Complemental strand, 12237482 - 12237400
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    |||||||||||| || |||||||||||||||||||||||| |||||||||  |||||| | ||||||||||||||||||||||    
T  12237482 aatcgtgacacgattttgctttcttcaaaatcttctatttctcttgctttctttgttgtttaagcttgcttgtgaactcaaaa 12237400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 19865515 - 19865597
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    |||||||||||| || || |||||||||||||||||||||||||||||||  |||||| | ||||||||||||||||||||||    
T  19865515 aatcgtgacacgattttgttttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactcaaaa 19865597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 388 - 466
Target Start/End: Original strand, 40617684 - 40617762
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactc 466  Q
    ||||||| |||| || ||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  40617684 aatcgtggcacgattttgccttcttcaaaatcttctatttttcttgcttttcttgctgcttaagcttgcttgtgaactc 40617762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 388 - 516
Target Start/End: Complemental strand, 5669756 - 5669628
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagact 486  Q
    |||||||||||| || |||||||||||||||||||||||||||||| |||  |||||| | || ||||||||||||||| |||||||||| |||| |||     
T  5669756 aatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgttgtttaaacttgcttgtgaactc-aaaatatcatgaaaatgaca 5669658  T
Q  487 ctaaaaatgtggaatgacagactatcatca 516  Q
    ||||||||   ||||||| |||| ||||||    
T  5669657 ctaaaaatagtgaatgactgactgtcatca 5669628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 388 - 516
Target Start/End: Complemental strand, 15431292 - 15431164
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagact 486  Q
    |||||||||||| || |||||||||||||||||||||||| ||||| |||  ||| || | || ||||||||||||||| |||||||||| |||||||||    
T  15431292 aatcgtgacacgattttgctttcttcaaaatcttctatttctcttgttttctttgctgtttaaacttgcttgtgaactc-aaaatatcatgaaaaagact 15431194  T
Q  487 ctaaaaatgtggaatgacagactatcatca 516  Q
    ||||||||   ||||||| |||| ||||||    
T  15431193 ctaaaaatagtgaatgactgactgtcatca 15431164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 388 - 516
Target Start/End: Complemental strand, 15437906 - 15437778
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagact 486  Q
    |||||||||||| || |||||||||||||||||||||||| ||||| |||  ||| || | || ||||||||||||||| |||||||||| |||||||||    
T  15437906 aatcgtgacacgattttgctttcttcaaaatcttctatttctcttgttttctttgctgtttaaacttgcttgtgaactc-aaaatatcatgaaaaagact 15437808  T
Q  487 ctaaaaatgtggaatgacagactatcatca 516  Q
    ||||||||   ||||||| |||| ||||||    
T  15437807 ctaaaaatagtgaatgactgactgtcatca 15437778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 388 - 516
Target Start/End: Original strand, 33410834 - 33410962
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagact 486  Q
    |||||||||||| || |||||||||||||||||||||||||||||| |||  |||||| | || ||||||||||||||| |||||||||| |||| |||     
T  33410834 aatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgttgtttaaacttgcttgtgaactc-aaaatatcatgaaaatgaca 33410932  T
Q  487 ctaaaaatgtggaatgacagactatcatca 516  Q
    ||||||||   ||||||| |||| ||||||    
T  33410933 ctaaaaatagtgaatgactgactgtcatca 33410962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 425 - 516
Target Start/End: Original strand, 15430674 - 15430766
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |||||   ||||||| |||| ||||||    
T  15430674 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaaagactctgaaaataacgaatgactgactgtcatca 15430766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 425 - 516
Target Start/End: Original strand, 15437288 - 15437380
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||| |||||   ||||||| |||| ||||||    
T  15437288 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaaagactctgaaaataacgaatgactgactgtcatca 15437380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 388 - 517
Target Start/End: Complemental strand, 9717079 - 9716950
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagact 486  Q
    |||||||||||| || |||||||||| ||||||||||||||||||| |||  |||||| | || ||||||||||||||| |||||||||| |||| |||     
T  9717079 aatcgtgacacgattttgctttcttcgaaatcttctatttttcttgttttctttgttgtttaaacttgcttgtgaactc-aaaatatcatgaaaatgaca 9716981  T
Q  487 ctaaaaatgtggaatgacagactatcatcat 517  Q
    ||||||||   ||||||| |||| |||||||    
T  9716980 ctaaaaatagtgaatgaccgactgtcatcat 9716950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 388 - 516
Target Start/End: Original strand, 3798668 - 3798796
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagact 486  Q
    |||||||||| | || ||||||||||||||||||||||||||||||||||  ||| || | || ||||||||||||||| |||||||||| |||| |||     
T  3798668 aatcgtgacaagattttgctttcttcaaaatcttctatttttcttgctttctttgctgtttaaacttgcttgtgaactc-aaaatatcatgaaaatgaca 3798766  T
Q  487 ctaaaaatgtggaatgacagactatcatca 516  Q
    ||||||||   ||||||| |||| ||||||    
T  3798767 ctaaaaatagtgaatgactgactgtcatca 3798796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 435 - 516
Target Start/End: Original strand, 53010377 - 53010458
Alignment:
Q  435 ttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    |||||||| |||| || ||| |||||||||||||||||||||||||||||||||||||||   ||||||| |||||||||||    
T  53010377 ttttcttgctgcttaatcttacttgtgaactcaaaaatatcataaaaagactctaaaaataatgaatgactgactatcatca 53010458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 425 - 516
Target Start/End: Complemental strand, 19826793 - 19826701
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactca-aaaatatcataaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    ||||||||||||||||||||||| || ||| |||||||||||| ||||| |||||||||||||||||||||   ||||||| |||| ||||||    
T  19826793 tttttcttgcttttcttgttgcttaatcttacttgtgaactcaaaaaatttcataaaaagactctaaaaatagcgaatgactgactgtcatca 19826701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 339 - 399
Target Start/End: Original strand, 40617615 - 40617675
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    |||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  40617615 atcgtgactcgttttaatcaatgtcgaatgaacctcatcttgtgttctaaatcgtgacacg 40617675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 425 - 516
Target Start/End: Original strand, 24044966 - 24045057
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    |||| ||||||||||||| |||| || |||| |||||||||||||||||||| |||||||||||||||||   ||||||| |||| ||||||    
T  24044966 ttttccttgcttttcttgctgcttaatcttgtttgtgaactcaaaaatatcaaaaaaagactctaaaaataacgaatgactgactgtcatca 24045057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 428 - 518
Target Start/End: Complemental strand, 44164090 - 44163999
Alignment:
Q  428 ttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcata-aaaagactctaaaaatgtggaatgacagactatcatcatc 518  Q
    ||||||||||||||| |||| || ||||||||||||||||||||||||||| |||||||| |||||||   ||||||| |||| ||||||||    
T  44164090 ttcttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaaagactttaaaaatagtgaatgactgactgtcatcatc 44163999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 407 - 470
Target Start/End: Complemental strand, 56194831 - 56194768
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    |||||||||||||||||||||||| |||||| ||||||| | ||||||||||||||||||||||    
T  56194831 tttcttcaaaatcttctatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaa 56194768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 408 - 470
Target Start/End: Complemental strand, 56198137 - 56198075
Alignment:
Q  408 ttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    ||||||||||||||||||||||| |||||| ||||||| | ||||||||||||||||||||||    
T  56198137 ttcttcaaaatcttctatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaa 56198075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 435 - 516
Target Start/End: Original strand, 52007350 - 52007431
Alignment:
Q  435 ttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    |||||||| |||| |||||||||| ||||||||| |||||||||||||||||||||||||   ||||||| |||| ||||||    
T  52007350 ttttcttgctgcttaagcttgcttttgaactcaacaatatcataaaaagactctaaaaatagcgaatgactgactgtcatca 52007431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 15431361 - 15431301
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    |||||||||| |||||| ||||||||||||||||||||| ||||||| |||||||||||||    
T  15431361 atcgtgacacattttaaccaatgtcgaatgaacctcatcctgtgctccaaatcgtgacacg 15431301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 15437975 - 15437915
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    |||||||||| |||||| ||||||||||||||||||||| ||||||| |||||||||||||    
T  15437975 atcgtgacacattttaaccaatgtcgaatgaacctcatcctgtgctccaaatcgtgacacg 15437915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 175 - 254
Target Start/End: Original strand, 32304744 - 32304823
Alignment:
Q  175 gcgtgagttaactcgcgtatgtgttaatttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    |||||||||||||| |  ||||||||||||||||||||| ||| |||  |||| ||| ||||||||||||||||||||||    
T  32304744 gcgtgagttaactcacacatgtgttaatttcagcgtgagttaactcacccagcatgacttaagtcacgcatgtgtaaaaa 32304823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 425 - 494
Target Start/End: Original strand, 27677874 - 27677944
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagactctaaaaat 494  Q
    ||||| |||||||||||| |||| || |||| ||||||||||||||||||||| |||||||||||||||||    
T  27677874 ttttttttgcttttcttgctgcttaatcttgattgtgaactcaaaaatatcataaaaaagactctaaaaat 27677944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 425 - 494
Target Start/End: Original strand, 27691933 - 27692003
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagactctaaaaat 494  Q
    |||||||||||||||||| |||| || |||||||||||| ||||||||||| | |||||||||||||||||    
T  27691933 tttttcttgcttttcttgctgcttaatcttgcttgtgaattcaaaaatatcgtaaaaaagactctaaaaat 27692003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 465
Target Start/End: Original strand, 5721843 - 5721920
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaact 465  Q
    |||||||||||| || |||||||||||||||||||||||||||||| |||  ||| || | ||||||| |||||||||    
T  5721843 aatcgtgacacgattttgctttcttcaaaatcttctatttttcttgttttctttgctgtttaagcttgtttgtgaact 5721920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 407 - 468
Target Start/End: Complemental strand, 33926230 - 33926169
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaa 468  Q
    ||||||||||||||| |||||||| |||||| ||||||| | ||||||||||||||||||||    
T  33926230 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaa 33926169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 339 - 399
Target Start/End: Original strand, 5721774 - 5721834
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||| ||||| ||||||||||||||||||||| ||||||  |||||||||||||    
T  5721774 atcgtgacacgatttaaccaatgtcgaatgaacctcatcctgtgcttcaaatcgtgacacg 5721834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 343 - 395
Target Start/End: Original strand, 19861094 - 19861146
Alignment:
Q  343 tgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtga 395  Q
    ||||||||||||| ||||||||||||||||||||| ||||||| |||||||||    
T  19861094 tgacacgttttaaccaatgtcgaatgaacctcatcctgtgctccaaatcgtga 19861146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 3798599 - 3798658
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacac 398  Q
    ||||||||||||||||| ||||||||||||||||||||| | || || ||||||||||||    
T  3798599 atcgtgacacgttttaaccaatgtcgaatgaacctcatcctttgttccaaatcgtgacac 3798658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 407 - 470
Target Start/End: Original strand, 15812973 - 15813036
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    ||||||||||||||| |||||||| |||||| ||||||| | || |||||||||||||||||||    
T  15812973 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaaacttgcttgtgaactcaaaa 15813036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 435 - 486
Target Start/End: Complemental strand, 35509280 - 35509229
Alignment:
Q  435 ttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagact 486  Q
    ||||||||||||| || ||||||||||||||||||||||||||| |||||||    
T  35509280 ttttcttgttgcttaatcttgcttgtgaactcaaaaatatcatataaagact 35509229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 175 - 254
Target Start/End: Original strand, 53260181 - 53260260
Alignment:
Q  175 gcgtgagttaactcgcgtatgtgttaatttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    ||||||||| |||| || ||||||||||||| ||||| | ||| ||| ||||||||| |||||||||| |||||||||||    
T  53260181 gcgtgagttgactcacgcatgtgttaatttcggcgtgggttaactcacgcagcgtgacttaagtcacgtatgtgtaaaaa 53260260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 19861159 - 19861241
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    |||||||||||  || ||  |||||||||||||| |||||||||||||||  ||| || | ||||||||||||||||||||||    
T  19861159 aatcgtgacacaattttgtgttcttcaaaatcttatatttttcttgctttctttgctgtttaagcttgcttgtgaactcaaaa 19861241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 388 - 470
Target Start/End: Complemental strand, 53093849 - 53093767
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    ||||||| |||| || | ||||||||||||||||| | ||||| |||||| |||| || | ||||||||||||||||||||||    
T  53093849 aatcgtgtcacgattttactttcttcaaaatcttcaacttttcatgctttccttgctgtttaagcttgcttgtgaactcaaaa 53093767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 411 - 519
Target Start/End: Original strand, 15405793 - 15405901
Alignment:
Q  411 ttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagactctaaaaatgtggaatgacagact 509  Q
    ||||||||||| |||||||| ||| || ||||||| | |||||||||||||||||| |||| ||||| |||| ||| ||||||||   ||||||| ||||    
T  15405793 ttcaaaatcttgtatttttcatgcgttccttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaatgacactaaaaataaagaatgactgact 15405891  T
Q  510 atcatcatca 519  Q
     |||||||||    
T  15405892 ttcatcatca 15405901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 255
Target Start/End: Complemental strand, 4675080 - 4675040
Alignment:
Q  215 taattcatgcagcgtgatttaagtcacgcatgtgtaaaaat 255  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  4675080 taattcatgcagcgtgacttaagtcacgcatgtgtaaaaat 4675040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 170 - 254
Target Start/End: Complemental strand, 19487610 - 19487526
Alignment:
Q  170 aaccagcgtgagttaactcgcgtatgtgttaatttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    |||| |||||||||||||| || |  |||| |||| ||| |||| ||| ||| ||||||||| ||||||||||||||||||||||    
T  19487610 aacctgcgtgagttaactcacgcagatgtttattttagcatgagttaactcacgcagcgtgagttaagtcacgcatgtgtaaaaa 19487526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 339 - 390
Target Start/End: Complemental strand, 9717148 - 9717097
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaat 390  Q
    ||||||||||| ||||| |||||||||| |||||||||| ||||||||||||    
T  9717148 atcgtgacacgatttaaccaatgtcgaacgaacctcatcctgtgctctaaat 9717097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 195 - 254
Target Start/End: Original strand, 11660950 - 11661009
Alignment:
Q  195 gtgttaatttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    ||||||||||||||||||| ||| |||  |||||||| |||||||||||| |||||||||    
T  11660950 gtgttaatttcagcgtgagttaactcacacagcgtgacttaagtcacgcaagtgtaaaaa 11661009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 407 - 470
Target Start/End: Complemental strand, 47114885 - 47114822
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    ||||||||||||||| |||||||| || ||| ||| ||| | ||||||||||||||||||||||    
T  47114885 tttcttcaaaatcttgtatttttcatgttttccttattgtttaagcttgcttgtgaactcaaaa 47114822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 435 - 516
Target Start/End: Complemental strand, 19820032 - 19819950
Alignment:
Q  435 ttttcttgttgctaaagcttgcttgtgaactcaaaaa-tatcataaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    |||||||| | || || |||||||||||||||||||| ||||||||||||||| |||||||   ||||||| |||| ||||||    
T  19820032 ttttcttgctacttaatcttgcttgtgaactcaaaaaatatcataaaaagactttaaaaatagcgaatgactgactgtcatca 19819950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 177 - 254
Target Start/End: Complemental strand, 32303992 - 32303915
Alignment:
Q  177 gtgagttaactcgcgtatgtgttaatttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    |||||||||||| |  ||||||||||| | ||||||| ||| ||||||  ||||| |||||||||| |||||||||||    
T  32303992 gtgagttaactcacacatgtgttaattcctgcgtgagttaactcatgcgacgtgacttaagtcacgtatgtgtaaaaa 32303915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 339 - 384
Target Start/End: Original strand, 33410765 - 33410810
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgct 384  Q
    ||||||||||||||||| ||||||||||||||||||| | ||||||    
T  33410765 atcgtgacacgttttaaccaatgtcgaatgaacctcaccttgtgct 33410810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 53093917 - 53093858
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||| ||  ||||||||||||||||||||| ||||||| || ||||||||||    
T  53093917 atcgtgacacgttctac-caatgtcgaatgaacctcatcctgtgctccaattcgtgacacg 53093858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 385
Target Start/End: Original strand, 19865453 - 19865492
Alignment:
Q  346 cacgttttaatcaatgtcgaatgaacctcatcatgtgctc 385  Q
    |||||||||| ||||||||||||||||||||| |||||||    
T  19865453 cacgttttaaccaatgtcgaatgaacctcatcctgtgctc 19865492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 342 - 376
Target Start/End: Complemental strand, 5680663 - 5680629
Alignment:
Q  342 gtgacacgttttaatcaatgtcgaatgaacctcat 376  Q
    |||||||||||||| ||||||||||||||||||||    
T  5680663 gtgacacgttttaaccaatgtcgaatgaacctcat 5680629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 45549363 - 45549392
Alignment:
Q  224 cagcgtgatttaagtcacgcatgtgtaaaa 253  Q
    ||||||||||||||||||||||||||||||    
T  45549363 cagcgtgatttaagtcacgcatgtgtaaaa 45549392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 466
Target Start/End: Original strand, 48014841 - 48014882
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactc 466  Q
    |||||||||||||||||||||   ||||||||||||||||||    
T  48014841 tttttcttgcttttcttgttgtataagcttgcttgtgaactc 48014882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 34981916 - 34981960
Alignment:
Q  209 gtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaa 253  Q
    ||||||||| |||||| |||||| ||||||||| |||||||||||    
T  34981916 gtgagataactcatgcggcgtgacttaagtcacacatgtgtaaaa 34981960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 5e-45; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 339 - 516
Target Start/End: Complemental strand, 8276209 - 8276012
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcg--------------------tgacacggttgtgctttcttcaaaat 418  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||                    ||||||| || || ||||||||||||    
T  8276209 atcgtgacacgttttaaccaatgtcgaatgaacctcatcatgtgctccaaatcgtgatacgttttcaacaatcatgacacgattttgttttcttcaaaat 8276110  T
Q  419 cttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  8276109 cttctatttttcttgcttttcttgctgcttgagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatatggaatgacagactgtcatca 8276012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 406 - 516
Target Start/End: Original strand, 20081530 - 20081640
Alignment:
Q  406 ctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgaca 505  Q
    ||||||||||  ||||  ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||   |||||||     
T  20081530 ctttcttcaatttctttgatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaacactctaaaaatagtgaatgact 20081629  T
Q  506 gactatcatca 516  Q
    |||| ||||||    
T  20081630 gactgtcatca 20081640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 388 - 517
Target Start/End: Complemental strand, 26556638 - 26556509
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagact 486  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||  |||||| | |||||||||||||||||| |||||||||| |||| |||     
T  26556638 aatcgtgacacgattttgctttcttcaaaatcttctatttttcttgctttctttgttgtttaagcttgcttgtgaactc-aaaatatcatgaaaatgaca 26556540  T
Q  487 ctaaaaatgtggaatgacagactatcatcat 517  Q
    ||||||||   ||||||| |||| |||||||    
T  26556539 ctaaaaatagtgaatgactgactgtcatcat 26556509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 418 - 494
Target Start/End: Complemental strand, 17730071 - 17729995
Alignment:
Q  418 tcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    ||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  17730071 tcttcgatttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaggactctaaaaat 17729995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 425 - 517
Target Start/End: Original strand, 45291383 - 45291475
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactatcatcat 517  Q
    ||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||| |||||||    
T  45291383 tttttcttgtttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatcat 45291475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 425 - 516
Target Start/End: Original strand, 9865551 - 9865642
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    |||||||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||   ||||||| |||| ||||||    
T  9865551 tttttcttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagcgaatgactgactgtcatca 9865642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 425 - 516
Target Start/End: Original strand, 45288047 - 45288138
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    ||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||| ||||||    
T  45288047 tttttcttgtttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatca 45288138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 426 - 516
Target Start/End: Original strand, 9273944 - 9274034
Alignment:
Q  426 ttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    ||||||| ||||||||| |||| |||||||||||||||||| ||||||||||||||||||| | |||||||| |||||| |||| ||||||    
T  9273944 ttttctttcttttcttggtgcttaagcttgcttgtgaactccaaaatatcataaaaagactttgaaaatgtgaaatgacggactgtcatca 9274034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 425 - 494
Target Start/End: Original strand, 4596833 - 4596902
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    ||||||||||||||||||||||| || ||| ||||||| |||||||||||||||||||||||||||||||    
T  4596833 tttttcttgcttttcttgttgcttaatctttcttgtgagctcaaaaatatcataaaaagactctaaaaat 4596902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 26556707 - 26556647
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  26556707 atcgtgacacgttttaaccaatgtcgaataaacctcatcatgtgctctaaatcgtgacacg 26556647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 425 - 494
Target Start/End: Complemental strand, 4694814 - 4694745
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    |||||||| ||||||||| |||| || ||||||||||||||||||||||||||| |||||||||||||||    
T  4694814 tttttcttacttttcttgctgcttaatcttgcttgtgaactcaaaaatatcatagaaagactctaaaaat 4694745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 425 - 494
Target Start/End: Complemental strand, 9080467 - 9080398
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    ||||||||| |||||||| |||| ||||||||||||||||||||||||  ||||||||||||||||||||    
T  9080467 tttttcttggttttcttgctgcttaagcttgcttgtgaactcaaaaattacataaaaagactctaaaaat 9080398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 425 - 494
Target Start/End: Complemental strand, 10344707 - 10344638
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    ||||| |||||||||||| |||| |||||||||||||||||||||||| |||||| ||||||||||||||    
T  10344707 ttttttttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatttcataagaagactctaaaaat 10344638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 10431583 - 10431523
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||||||  ||||||||| ||||||||||| |||||||||||||||||||||    
T  10431583 atcgtgacacgttttagccaatgtcgagtgaacctcatcctgtgctctaaatcgtgacacg 10431523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 407 - 470
Target Start/End: Complemental strand, 16164998 - 16164935
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    ||||||||||||||| |||||||| |||||| ||||||| | ||||||||||||||||||||||    
T  16164998 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaa 16164935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 42133230 - 42133293
Alignment:
Q  1 agtgttgttaatattcctggtctgaaagcaccgctaacattatgttgtagttgaagtctatctt 64  Q
    |||| ||||||||||||||||||||||||||| ||||||| |||| |||||| |||||||||||    
T  42133230 agtgctgttaatattcctggtctgaaagcaccactaacatcatgtagtagtttaagtctatctt 42133293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 407 - 470
Target Start/End: Complemental strand, 48644725 - 48644662
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    ||||||||||||||| |||||||| |||||| ||||||| | ||||||||||||||||||||||    
T  48644725 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaa 48644662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 388 - 517
Target Start/End: Complemental strand, 10431514 - 10431385
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagact 486  Q
    |||||||||||  || |||||||||||||||||| ||||||||||| |||  ||| || | || ||||||||||||||| |||||||||| |||| |||     
T  10431514 aatcgtgacacaattttgctttcttcaaaatcttatatttttcttgttttctttgctgtttaaacttgcttgtgaactc-aaaatatcatgaaaatgaca 10431416  T
Q  487 ctaaaaatgtggaatgacagactatcatcat 517  Q
    ||||||||   ||||||| |||| |||||||    
T  10431415 ctaaaaatagtgaatgactgactgtcatcat 10431385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 42133367 - 42133415
Alignment:
Q  110 aactagtactaaagttccatgacacaaaaaattaaatgttgttttcatt 158  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  42133367 aactattactaaagttccatgacacaaaatattaaatgttgttttcatt 42133415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 339 - 399
Target Start/End: Original strand, 45287940 - 45288000
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||||||| ||||||||||||||||||||| | || || |||||||||||||    
T  45287940 atcgtgacacgttttaaccaatgtcgaatgaacctcatcttatgttccaaatcgtgacacg 45288000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 388 - 516
Target Start/End: Complemental strand, 4542202 - 4542074
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagact 486  Q
    |||||||||||   | ||||||| |||||||||||||||||||||| |||  ||| || | || ||||||||||||||| |||||||||| |||| |||     
T  4542202 aatcgtgacacaaatttgctttcctcaaaatcttctatttttcttgttttctttgctgtttaaacttgcttgtgaactc-aaaatatcatgaaaatgaca 4542104  T
Q  487 ctaaaaatgtggaatgacagactatcatca 516  Q
    ||||||||   ||||||| |||| ||||||    
T  4542103 ctaaaaatagtgaatgactgactgtcatca 4542074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 399
Target Start/End: Original strand, 45291276 - 45291336
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||||||| ||||||||||||||||||||  | || || |||||||||||||    
T  45291276 atcgtgacacgttttaaccaatgtcgaatgaacctcattctatgttccaaatcgtgacacg 45291336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 407 - 470
Target Start/End: Complemental strand, 6602730 - 6602667
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    ||||||||||||||| |||||||| | |||| ||||||| | ||||||||||||||||| ||||    
T  6602730 tttcttcaaaatcttgtatttttcatactttccttgttgtttaagcttgcttgtgaacttaaaa 6602667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 2442149 - 2442231
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    ||||||||||||  | ||||||| ||| |||||||||||||||||| |||  ||| || | || |||||||||||||||||||    
T  2442149 aatcgtgacacgaatttgctttcctcagaatcttctatttttcttgttttctttgctgtttaaacttgcttgtgaactcaaaa 2442231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 23284767 - 23284824
Alignment:
Q  169 aaaccagcgtgagttaactcgcgtatgtgttaatttcagcgtgagataattcatgcag 226  Q
    |||||||||||||||||||| || | ||||||||| ||||||||| ||| ||||||||    
T  23284767 aaaccagcgtgagttaactcacgcaggtgttaattccagcgtgagttaaatcatgcag 23284824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 42172023 - 42172079
Alignment:
Q  1 agtgttgttaatattcctggtctgaaagcaccgctaacattatgttgtagttgaagt 57  Q
    |||| |||||||||||||||||| |||||||| |||||||  ||| |||||||||||    
T  42172023 agtgctgttaatattcctggtctaaaagcaccactaacatcttgtagtagttgaagt 42172079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 254
Target Start/End: Complemental strand, 30859955 - 30859856
Alignment:
Q  157 tttgaaattttgaaaccag-cgtgagttaactcgcgtatgtgttaattt-cagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    ||||||||||||||||||  |||||||||||||  | | |||||||||| | | ||||| ||| ||| || |||||| |||||||| |||||||||||||    
T  30859955 tttgaaattttgaaaccaaacgtgagttaactcatgcaggtgttaattttcggtgtgagttaactcacgcggcgtgacttaagtcatgcatgtgtaaaaa 30859856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 207 - 253
Target Start/End: Original strand, 42629201 - 42629247
Alignment:
Q  207 gcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaa 253  Q
    ||||||| ||| ||||||||||||| |||||||| ||||||||||||    
T  42629201 gcgtgagttaactcatgcagcgtgacttaagtcatgcatgtgtaaaa 42629247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 254
Target Start/End: Original strand, 16488152 - 16488225
Alignment:
Q  181 gttaactcgcgtatgtgttaatttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    |||||||| || |||||||||   | ||||||  ||| ||||||||||||| ||||||||| ||||||||||||    
T  16488152 gttaactcacgcatgtgttaacacctgcgtgaattaactcatgcagcgtgacttaagtcacacatgtgtaaaaa 16488225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 223 - 255
Target Start/End: Complemental strand, 30665230 - 30665198
Alignment:
Q  223 gcagcgtgatttaagtcacgcatgtgtaaaaat 255  Q
    ||||||||| |||||||||||||||||||||||    
T  30665230 gcagcgtgacttaagtcacgcatgtgtaaaaat 30665198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 1e-42; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 388 - 516
Target Start/End: Original strand, 29644180 - 29644308
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactc 487  Q
    |||||||||||| || | ||||||||||| ||||||||||||||||||||| ||| |||| ||| |||||||||||||||||||||||||||||||||||    
T  29644180 aatcgtgacacgattttactttcttcaaagtcttctatttttcttgctttttttgctgcttaagtttgcttgtgaactcaaaaatatcataaaaagactc 29644279  T
Q  488 taaaaatgtggaatgacagactatcatca 516  Q
    || ||||||||||||||||||| ||||||    
T  29644280 tataaatgtggaatgacagactgtcatca 29644308  T

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Target: chr1; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 407 - 494
Target Start/End: Original strand, 27537104 - 27537191
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    ||||||||||||||| |||||||| |||||| ||||||| | |||||||||||||||||||||| ||||||||||||||| |||||||    
T  27537104 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcataaaaagactataaaaat 27537191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 407 - 494
Target Start/End: Original strand, 45961598 - 45961685
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    ||||||||||||||| |||||||| |||||| ||||||| | |||||||||||||||||||||| |||||||| ||||||||||||||    
T  45961598 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcataacaagactctaaaaat 45961685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 418 - 516
Target Start/End: Original strand, 41059135 - 41059234
Alignment:
Q  418 tcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    ||||| ||||||||||||||||||| |||| ||||||||||| ||||||||||||||||| |||||||||||||||||   ||||||| |||| ||||||    
T  41059135 tcttcgatttttcttgcttttcttgctgcttaagcttgcttgcgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatca 41059234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 429 - 516
Target Start/End: Complemental strand, 2404809 - 2404722
Alignment:
Q  429 tcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    |||||||||||||| |||| || ||||||||||||||||||||||| |||||||||||||||||||   ||||||| |||| ||||||    
T  2404809 tcttgcttttcttgctgcttaatcttgcttgtgaactcaaaaatattataaaaagactctaaaaatagcgaatgactgactgtcatca 2404722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 339 - 399
Target Start/End: Original strand, 49499371 - 49499431
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||    
T  49499371 atcgtgacacgttttaaccaatgtcgaatgaacctcatcatatgctccaaatcgtgacacg 49499431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 388 - 494
Target Start/End: Complemental strand, 2793427 - 2793321
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatca-taaaaagact 486  Q
    |||||||||||| || |||||||||| ||||||||||||||||||| |||  ||  || | || ||||||||||||||| ||||||||| ||||||||||    
T  2793427 aatcgtgacacgattttgctttcttcgaaatcttctatttttcttgttttctttactgtttaaacttgcttgtgaactc-aaaatatcattaaaaagact 2793329  T
Q  487 ctaaaaat 494  Q
    ||||||||    
T  2793328 ctaaaaat 2793321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 49499440 - 49499522
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    |||||||||| | || |||||||||||||||||||||||||||||| |||  |||||| | |||||||| |||||||||||||    
T  49499440 aatcgtgacatgattttgctttcttcaaaatcttctatttttcttgttttctttgttgtttaagcttgcatgtgaactcaaaa 49499522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 2793496 - 2793436
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||  |||||||||||||    
T  2793496 atcgtgacacgttttaaccaatgtcgaatgaacctcatcctgtgcttcaaatcgtgacacg 2793436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 407 - 470
Target Start/End: Original strand, 6071791 - 6071854
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    ||||||||||||||| |||||||| || ||||||||||| | ||||||||||||||||||||||    
T  6071791 tttcttcaaaatcttgtatttttcatgtttttcttgttgtttaagcttgcttgtgaactcaaaa 6071854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 407 - 470
Target Start/End: Complemental strand, 31204123 - 31204060
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    ||||||||||||||| |||||||| |||||| ||||||| | ||||||||||||||||||||||    
T  31204123 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaa 31204060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 425 - 494
Target Start/End: Complemental strand, 42021812 - 42021743
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    |||||||||||||| ||| |||| || ||||||||||||||||  ||||| |||||||||||||||||||    
T  42021812 tttttcttgcttttattgctgcttaaacttgcttgtgaactcagtaatattataaaaagactctaaaaat 42021743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 339 - 399
Target Start/End: Original strand, 1951148 - 1951208
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||||||| || |||||||||||||||||| | ||||| |||||||||||||    
T  1951148 atcgtgacacgttttaaccactgtcgaatgaacctcatcctatgctccaaatcgtgacacg 1951208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 176 - 254
Target Start/End: Complemental strand, 32713288 - 32713210
Alignment:
Q  176 cgtgagttaactcgcgtatgtgttaatttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    ||||||||||||| || | |||||||||| |||||||| ||| ||| ||||||||| |||||||||| |||||| ||||    
T  32713288 cgtgagttaactcacgcaagtgttaattttagcgtgagttaactcacgcagcgtgacttaagtcacgtatgtgttaaaa 32713210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 435 - 516
Target Start/End: Original strand, 21019287 - 21019367
Alignment:
Q  435 ttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    |||||||| |||| ||||||| ||| ||||||||||||||||| ||||||||||||||||   ||||||| |||| ||||||    
T  21019287 ttttcttgctgcttaagcttggttgcgaactcaaaaatatcat-aaaagactctaaaaatagcgaatgactgactgtcatca 21019367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 388 - 468
Target Start/End: Original strand, 1951217 - 1951297
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaa 468  Q
    |||||||||||| || |||||||||  ||||||||||||||||||| |||  ||| || | || |||||||||||||||||    
T  1951217 aatcgtgacacgattttgctttctttgaaatcttctatttttcttgttttctttgctgtttaaacttgcttgtgaactcaa 1951297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 425 - 493
Target Start/End: Original strand, 21108302 - 21108370
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaa 493  Q
    ||||||||||||||||||  ||| || ||||||| |||  ||||||||||||||| |||||||||||||    
T  21108302 tttttcttgcttttcttgcagcttaatcttgcttttgagttcaaaaatatcataagaagactctaaaaa 21108370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 339 - 398
Target Start/End: Complemental strand, 42021920 - 42021861
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacac 398  Q
    ||||| ||||||||||| |||||||||||||||||||||   ||||| ||||||||||||    
T  42021920 atcgtaacacgttttaaccaatgtcgaatgaacctcatccgatgctccaaatcgtgacac 42021861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 254
Target Start/End: Complemental strand, 40198852 - 40198814
Alignment:
Q  216 aattcatgcagcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  40198852 aattcatgcagcgtgacttaagtcacgcatgtgtaaaaa 40198814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 193 - 254
Target Start/End: Complemental strand, 11434815 - 11434754
Alignment:
Q  193 atgtgttaatttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    ||||||||||| ||||||||| ||| ||| |||| |||| |||||||| |||||||||||||    
T  11434815 atgtgttaattccagcgtgagttaactcacgcagtgtgacttaagtcaggcatgtgtaaaaa 11434754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 339 - 397
Target Start/End: Original strand, 34733067 - 34733124
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgaca 397  Q
    |||||||||| |||||  ||||||||||||||||||||| ||||||| ||||| |||||    
T  34733067 atcgtgacacattttac-caatgtcgaatgaacctcatcctgtgctccaaatcctgaca 34733124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 254
Target Start/End: Original strand, 7013646 - 7013731
Alignment:
Q  169 aaaccagcgtgagttaactcgcgtatgtgttaatttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    |||| |||||||||||| || || | ||||||||| |  |||||| ||| | ||||  |||||||||||| |||||||||||||||    
T  7013646 aaactagcgtgagttaattcacgcaggtgttaattcctacgtgagttaacttatgcgacgtgatttaagttacgcatgtgtaaaaa 7013731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 32306458 - 32306417
Alignment:
Q  172 ccagcgtgagttaactcgcgtatgtgttaatttcagcgtgag 213  Q
    ||||||||||||||||| || | |||||||||||||||||||    
T  32306458 ccagcgtgagttaactcacgcaagtgttaatttcagcgtgag 32306417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 273 - 317
Target Start/End: Complemental strand, 11434736 - 11434692
Alignment:
Q  273 acacttacgttggttaactagtgtaggagtattttggtcatggct 317  Q
    |||||| |||| ||||||||| | |||||||||||||||||||||    
T  11434736 acacttgcgttagttaactagcgcaggagtattttggtcatggct 11434692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 226 - 254
Target Start/End: Original strand, 37920166 - 37920194
Alignment:
Q  226 gcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    |||||||||||||||||||||||||||||    
T  37920166 gcgtgatttaagtcacgcatgtgtaaaaa 37920194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 3e-34; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 388 - 494
Target Start/End: Complemental strand, 16788516 - 16788411
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactc 487  Q
    |||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |||||| ||    
T  16788516 aatcgtgacacgattgtgctttcatcaaaatcttatatttttcttgcttttcttgttgcttaagcttgcttgtgaactcaaaattatcat-aaaagattc 16788418  T
Q  488 taaaaat 494  Q
    |||||||    
T  16788417 taaaaat 16788411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 388 - 517
Target Start/End: Original strand, 25139912 - 25140041
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactc 487  Q
    |||||||||||| || |||||||||| |||||||||||||||||||||||  |||  | | |||||| ||||||||||||||||||||||||||| ||||    
T  25139912 aatcgtgacacgattttgctttcttcgaaatcttctatttttcttgctttctttgccgtttaagcttacttgtgaactcaaaaatatcataaaaaaactc 25140011  T
Q  488 taaaaatgtggaatgacagactatcatcat 517  Q
    ||||| ||||||||||| |||| |||||||    
T  25140012 taaaattgtggaatgactgactgtcatcat 25140041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 407 - 494
Target Start/End: Original strand, 31430529 - 31430616
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    ||||||||||||||| |||||||| |||||| ||||||| | |||||||||||||||||||||| |||||||||||||||||||||||    
T  31430529 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaat 31430616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 407 - 494
Target Start/End: Complemental strand, 38014745 - 38014658
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    ||||||||||||||| |||||||| |||||| ||||||| | |||||||||||||||||||||| |||||||||||||||||||||||    
T  38014745 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaattatcataaaaagactctaaaaat 38014658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 339 - 468
Target Start/End: Complemental strand, 29439772 - 29439643
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgctttt 438  Q
    ||||||||||||||||| |||| |||||||||| ||||| ||||||  ||||||||||||| || |||||||||| ||||||||| ||||||||| |||     
T  29439772 atcgtgacacgttttaaccaatatcgaatgaacttcatcctgtgcttcaaatcgtgacacgattttgctttcttcgaaatcttctttttttcttgttttc 29439673  T
Q  439 cttgttgctaaagcttgcttgtgaactcaa 468  Q
     ||| || | || |||||||||||||||||    
T  29439672 tttgctgtttaaacttgcttgtgaactcaa 29439643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 425 - 517
Target Start/End: Complemental strand, 10600042 - 10599950
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactatcatcat 517  Q
    ||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||   ||||||| |||| |||||||    
T  10600042 tttttcttgtttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagattctaaaaatagtgaatgactgactgtcatcat 10599950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 388 - 516
Target Start/End: Complemental strand, 25873331 - 25873203
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagact 486  Q
    |||||||||||| || | |||||||||||||||||||||| ||||| |||  |||||| | || ||||||||||||||| |||||||||| |||||||||    
T  25873331 aatcgtgacacgatttttctttcttcaaaatcttctatttctcttgttttctttgttgtttaaacttgcttgtgaactc-aaaatatcatgaaaaagact 25873233  T
Q  487 ctaaaaatgtggaatgacagactatcatca 516  Q
    ||||||||   ||||||| |||| ||||||    
T  25873232 ctaaaaatagtgaatgactgactgtcatca 25873203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 425 - 516
Target Start/End: Complemental strand, 3874573 - 3874482
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    |||||||||||||||||| |||| || |||| ||||||||||||||||||| ||||||||||||||||||   ||||||| |||| ||||||    
T  3874573 tttttcttgcttttcttgctgcttaatcttgtttgtgaactcaaaaatatcctaaaaagactctaaaaataatgaatgactgactgtcatca 3874482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 388 - 494
Target Start/End: Complemental strand, 15466298 - 15466192
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagact 486  Q
    |||||||||||| || |||||||||||||||||||||||| ||||| |||  |||||| | |||||||||||||||||| |||||||||| |||| |||     
T  15466298 aatcgtgacacgattttgctttcttcaaaatcttctatttctcttgatttctttgttgtttaagcttgcttgtgaactc-aaaatatcatgaaaatgaca 15466200  T
Q  487 ctaaaaat 494  Q
    ||||||||    
T  15466199 ctaaaaat 15466192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 428 - 494
Target Start/End: Original strand, 13972725 - 13972791
Alignment:
Q  428 ttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    ||||||||||||||| |||| || |||| ||||||||||||||||||||||||||||||||||||||    
T  13972725 ttcttgcttttcttgctgcttaatcttgtttgtgaactcaaaaatatcataaaaagactctaaaaat 13972791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 388 - 521
Target Start/End: Complemental strand, 25869963 - 25869830
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagact 486  Q
    |||||||||||| || | |||||||||||||||||||||| ||||| |||  |||||| | || ||| ||||||||||| |||||||||| |||||||||    
T  25869963 aatcgtgacacgatttttctttcttcaaaatcttctatttctcttgttttctttgttgtttaaactttcttgtgaactc-aaaatatcatgaaaaagact 25869865  T
Q  487 ctaaaaatgtggaatgacagactatcatcatcagt 521  Q
    ||||||||   ||||||| |||| |||||| ||||    
T  25869864 ctaaaaatagtgaatgactgactgtcatcaacagt 25869830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 425 - 494
Target Start/End: Complemental strand, 13136853 - 13136784
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    |||||||||||||||||| |||| || |||| ||||||||||||||||||||||||| ||||||||||||    
T  13136853 tttttcttgcttttcttgctgcttaatcttgtttgtgaactcaaaaatatcataaaatgactctaaaaat 13136784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 25870032 - 25869972
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||    
T  25870032 atcgtgacacgttttaatcaatgtcgaatgaacttcatcctgtgctccaaatcgtgacacg 25869972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 339 - 399
Target Start/End: Original strand, 38006089 - 38006149
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||    
T  38006089 atcgtgacacgttttaaccaatgtcgaatgaacctcatcctgtgctccaaatcgtgacacg 38006149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 435 - 494
Target Start/End: Complemental strand, 43722985 - 43722926
Alignment:
Q  435 ttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    |||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||    
T  43722985 ttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 43722926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 444 - 494
Target Start/End: Complemental strand, 5665902 - 5665852
Alignment:
Q  444 tgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 494  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5665902 tgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaat 5665852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 407 - 481
Target Start/End: Original strand, 31428340 - 31428414
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaa 481  Q
    ||||||||||||||| |||||||| |||||| ||||||| | || ||||||||||||||||||| ||||||||||    
T  31428340 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaaacttgcttgtgaactcaaaattatcataaaa 31428414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 195 - 257
Target Start/End: Complemental strand, 33710960 - 33710898
Alignment:
Q  195 gtgttaatttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaatta 257  Q
    ||||||||||||||||||| ||| ||| ||||||||| |||||||||||||||||||||||||    
T  33710960 gtgttaatttcagcgtgagttaactcacgcagcgtgacttaagtcacgcatgtgtaaaaatta 33710898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 38006158 - 38006240
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    |||||| ||||| || |||||||||||||||||||||||| |||||||||  |||||| | ||||||| ||||||||||||||    
T  38006158 aatcgtcacacgattttgctttcttcaaaatcttctatttctcttgctttctttgttgtttaagcttgtttgtgaactcaaaa 38006240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 388 - 516
Target Start/End: Original strand, 30275563 - 30275691
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagact 486  Q
    ||||||||||||  | ||||||| |||||||||||||||||||||| |||  |||||| | || |||| ||||||| || |||||||||| |||| |||     
T  30275563 aatcgtgacacgaatttgctttcctcaaaatcttctatttttcttgttttctttgttgtttaaacttgtttgtgaattc-aaaatatcatgaaaatgaca 30275661  T
Q  487 ctaaaaatgtggaatgacagactatcatca 516  Q
    |||||||| | ||||||| |||||||||||    
T  30275662 ctaaaaatattgaatgactgactatcatca 30275691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 339 - 399
Target Start/End: Original strand, 36809238 - 36809298
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||||| |||||||||||||    
T  36809238 atcgtgacacgttttaaccaatgtcgaatgaatctcatcctgtgctccaaatcgtgacacg 36809298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 388 - 470
Target Start/End: Original strand, 25821789 - 25821872
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaa-tcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    |||| ||||||| || |||||||||||||| |||||||||||||||| |||  |||||| | ||||||||||||||||||||||    
T  25821789 aatcttgacacgattttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaagcttgcttgtgaactcaaaa 25821872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 407 - 470
Target Start/End: Original strand, 36985626 - 36985689
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    |||||||||||||||||||||||  |||||| ||||||| | ||||||||||||||||||||||    
T  36985626 tttcttcaaaatcttctattttttctgctttccttgttgtttaagcttgcttgtgaactcaaaa 36985689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 407 - 470
Target Start/End: Complemental strand, 45453160 - 45453097
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    ||||||||||||||| |||||||| |||||| ||||||| | ||||||||||||||||||||||    
T  45453160 tttcttcaaaatcttgtatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaa 45453097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 435 - 493
Target Start/End: Complemental strand, 5105032 - 5104974
Alignment:
Q  435 ttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaa 493  Q
    |||||||| |||| || ||||||||||||||||||||||||||||||| ||||||||||    
T  5105032 ttttcttgctgcttaatcttgcttgtgaactcaaaaatatcataaaaaaactctaaaaa 5104974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 516
Target Start/End: Original strand, 36809307 - 36809435
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagact 486  Q
    |||||||||||   | ||||||| |||||||||||||||||||||| |||  |||||| | || ||||||||||||||| |||||||||| |||| |||     
T  36809307 aatcgtgacacaaatttgctttcctcaaaatcttctatttttcttgttttctttgttgtttaaacttgcttgtgaactc-aaaatatcatgaaaatgaca 36809405  T
Q  487 ctaaaaatgtggaatgacagactatcatca 516  Q
    ||||||||   ||||||| |||| ||||||    
T  36809406 ctaaaaatagtgaatgactgactgtcatca 36809435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 435 - 491
Target Start/End: Complemental strand, 6826055 - 6825999
Alignment:
Q  435 ttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaa 491  Q
    |||||||| |||| || ||||||||||||||||||||||||||||||||||| ||||    
T  6826055 ttttcttgatgcttaatcttgcttgtgaactcaaaaatatcataaaaagactttaaa 6825999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 10600160 - 10600100
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||||||| ||||||||||||||||||||| | || || |||||||||||||    
T  10600160 atcgtgacacgttttaaccaatgtcgaatgaacctcatcctatgttccaaatcgtgacacg 10600100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 398
Target Start/End: Original strand, 25821720 - 25821779
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacac 398  Q
    |||||||||| |||||| ||||||||||||||||||||| |||| || ||||||||||||    
T  25821720 atcgtgacacattttaaccaatgtcgaatgaacctcatcctgtgttccaaatcgtgacac 25821779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 407 - 470
Target Start/End: Complemental strand, 45456409 - 45456346
Alignment:
Q  407 tttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    ||||||||||||||| |||||||| ||||||  |||||| | ||||||||||||||||||||||    
T  45456409 tttcttcaaaatcttgtatttttcatgctttctttgttgtttaagcttgcttgtgaactcaaaa 45456346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 388 - 516
Target Start/End: Complemental strand, 26358800 - 26358672
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagact 486  Q
    |||||||||||| || |||||||||| |||||||||||||||||||  ||  ||| || | || ||| ||||||||||| |||||||||| |||| |||     
T  26358800 aatcgtgacacgattttgctttcttcgaaatcttctatttttcttgtcttctttgctgtttaaacttccttgtgaactc-aaaatatcatgaaaatgaca 26358702  T
Q  487 ctaaaaatgtggaatgacagactatcatca 516  Q
    ||||||||   ||||||| |||| ||||||    
T  26358701 ctaaaaatagtgaatgactgactgtcatca 26358672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 26358869 - 26358809
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||| ||||| ||||| ||||||||||||||| ||||||| |||||||| ||||    
T  26358869 atcgtgacacgatttaaccaatgccgaatgaacctcatcctgtgctccaaatcgtgccacg 26358809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 257
Target Start/End: Original strand, 3816278 - 3816360
Alignment:
Q  175 gcgtgagttaactcgcgtatgtgttaatttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaatta 257  Q
    |||||||||||||  || | ||||||||| || |||||| ||| ||| ||||||||| ||||||||| ||| |||||||||||    
T  3816278 gcgtgagttaacttacgcaggtgttaattacaacgtgagttaactcacgcagcgtgacttaagtcacacatatgtaaaaatta 3816360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 385
Target Start/End: Complemental strand, 25873400 - 25873354
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctc 385  Q
    ||||||||||| ||||| ||||||||||||||||||||| |||||||    
T  25873400 atcgtgacacggtttaaccaatgtcgaatgaacctcatcctgtgctc 25873354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 16788585 - 16788525
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||||||| |||| |||||| |||  |||| || ||||||||||||||||||    
T  16788585 atcgtgacacgttttaaccaatatcgaataaactccatcctgcgctctaaatcgtgacacg 16788525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 399
Target Start/End: Original strand, 30275495 - 30275554
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||||||| |||||||||||||| |||||| |  |||| |||||||||||||    
T  30275495 atcgtgacacgttttaaccaatgtcgaatgaa-ctcatcctacgctccaaatcgtgacacg 30275554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 253
Target Start/End: Original strand, 19004907 - 19004950
Alignment:
Q  210 tgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaa 253  Q
    |||| ||| |||||| ||||||||||||||||||||||||||||    
T  19004907 tgagttaactcatgcggcgtgatttaagtcacgcatgtgtaaaa 19004950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 207 - 253
Target Start/End: Complemental strand, 19004862 - 19004816
Alignment:
Q  207 gcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaa 253  Q
    ||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  19004862 gcgtgagttaactcatgcggcgtgacttaagtcacgcatgtgtaaaa 19004816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 66; Significance: 7e-29; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 388 - 516
Target Start/End: Complemental strand, 26373 - 26253
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactc 487  Q
    |||||||||||| || ||||||||||||||||||||||||||| ||||         ||| | | |||||||||||||||||||||||||||||||||||    
T  26373 aatcgtgacacgattttgctttcttcaaaatcttctatttttcatgct---------gcttatgtttgcttgtgaactcaaaaatatcataaaaagactc 26283  T
Q  488 ta-aaaatgtggaatgacagactatcatca 516  Q
    || |||||||||||||||||||||||||||    
T  26282 taaaaaatgtggaatgacagactatcatca 26253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 339 - 384
Target Start/End: Complemental strand, 26442 - 26397
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgct 384  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||    
T  26442 atcgtgacacgttttaaccaatgtcgaatgaacctcatcctgtgct 26397  T

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Target: scaffold1993 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold1993
Description:

Target: scaffold1993; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 425 - 517
Target Start/End: Complemental strand, 1136 - 1044
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactatcatcat 517  Q
    |||||||||||||||||| |||| |||||| ||| ||||||| |||||||||||||||||||||||||||||| |||||| |||| |||||||    
T  1136 tttttcttgcttttcttggtgcttaagcttccttatgaactccaaaatatcataaaaagactctaaaaatgtgaaatgactgactgtcatcat 1044  T

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Target: scaffold0757 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0757
Description:

Target: scaffold0757; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 425 - 516
Target Start/End: Complemental strand, 4654 - 4563
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    ||||||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||   ||||||| |||| ||||||    
T  4654 tttttcttgattttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatagtgaatgactgactgtcatca 4563  T

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Target: scaffold0270 (Bit Score: 60; Significance: 3e-25; HSPs: 6)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 425 - 492
Target Start/End: Original strand, 4329 - 4396
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaa 492  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4329 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaa 4396  T

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Target: scaffold0270; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 425 - 492
Target Start/End: Original strand, 11459 - 11526
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaa 492  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11459 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaa 11526  T

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Target: scaffold0270; HSP #3
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 425 - 492
Target Start/End: Original strand, 969 - 1036
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaa 492  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||    
T  969 tttttcttgcttttcttgctgcttaagcttgcttgtgaactcaaaaatatcataaaaatactctaaaa 1036  T

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Target: scaffold0270; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 862 - 896
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacct 373  Q
    ||||||||||||||||| |||||||||||||||||    
T  862 atcgtgacacgttttaaccaatgtcgaatgaacct 896  T

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Target: scaffold0270; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 4222 - 4256
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacct 373  Q
    ||||||||||||||||| |||||||||||||||||    
T  4222 atcgtgacacgttttaaccaatgtcgaatgaacct 4256  T

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Target: scaffold0270; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 11352 - 11386
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacct 373  Q
    ||||||||||||||||| |||||||||||||||||    
T  11352 atcgtgacacgttttaaccaatgtcgaatgaacct 11386  T

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Target: scaffold0381 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 425 - 516
Target Start/End: Original strand, 6462 - 6554
Alignment:
Q  425 tttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||   ||||||| |||| ||||||    
T  6462 tttttcttgcttttcttgttgcttaagcttgcctgtgaactcaaaaatatcataaaaaagactctaaaaatagcgaatgactgactgtcatca 6554  T

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Target: scaffold0520 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 426 - 516
Target Start/End: Original strand, 4790 - 4880
Alignment:
Q  426 ttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcataaaaagactctaaaaatgtggaatgacagactatcatca 516  Q
    ||||||| ||||| ||| |||| || |||| ||||||||||||||||||||||||||||||||||||||   ||||||| |||| ||||||    
T  4790 ttttctttctttttttgctgcttaatcttgtttgtgaactcaaaaatatcataaaaagactctaaaaataacgaatgactgactgtcatca 4880  T

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Target: scaffold0035 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 388 - 470
Target Start/End: Complemental strand, 61725 - 61643
Alignment:
Q  388 aatcgtgacacggttgtgctttcttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    |||||||||||| || ||||||||| |||||||||||||| ||||| |||  |||||| | ||||||||||||||||||||||    
T  61725 aatcgtgacacgattttgctttctttaaaatcttctatttctcttgatttctttgttgtttaagcttgcttgtgaactcaaaa 61643  T

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Target: scaffold0035; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 339 - 399
Target Start/End: Complemental strand, 61794 - 61734
Alignment:
Q  339 atcgtgacacgttttaatcaatgtcgaatgaacctcatcatgtgctctaaatcgtgacacg 399  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| |  |||||||||||||    
T  61794 atcgtgacacgttttaaccaatgtcgaatgaacctcatcttgtgtttcaaatcgtgacacg 61734  T

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Target: scaffold0012 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 160 - 254
Target Start/End: Original strand, 36136 - 36230
Alignment:
Q  160 gaaattttgaaaccagcgtgagttaactcgcgtatgtgttaatttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    ||||||||||||||||| ||||||||||| || | ||||||||| ||||||||| ||  ||| ||||||||| |||||||||| | |||||||||    
T  36136 gaaattttgaaaccagcatgagttaactcacgcacgtgttaattccagcgtgagttagctcacgcagcgtgacttaagtcacgtaagtgtaaaaa 36230  T

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Target: scaffold0045 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 410 - 470
Target Start/End: Complemental strand, 89071 - 89011
Alignment:
Q  410 cttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    ||||||||||||||||||||| |||||| ||||||| | ||||||||||||||||||||||    
T  89071 cttcaaaatcttctatttttcatgctttccttgttgtttaagcttgcttgtgaactcaaaa 89011  T

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Target: scaffold0334 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 470
Target Start/End: Complemental strand, 18588 - 18509
Alignment:
Q  392 gtgacacggttgtgctttcttcaaaa-tcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaa 470  Q
    |||||||| || |||||||||||||| |||||||||||||||| |||  |||||| | |||||||| |||||||||||||    
T  18588 gtgacacgtttttgctttcttcaaaaatcttctatttttcttgttttctttgttgtttaagcttgcatgtgaactcaaaa 18509  T

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Target: scaffold1684 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold1684
Description:

Target: scaffold1684; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 411 - 519
Target Start/End: Original strand, 369 - 477
Alignment:
Q  411 ttcaaaatcttctatttttcttgcttttcttgttgctaaagcttgcttgtgaactcaaaaatatcat-aaaaagactctaaaaatgtggaatgacagact 509  Q
    ||||||||||| |||||||| ||| || ||||||| | |||||||||||||||||| |||| ||||| |||| ||| ||||||||   ||||||| ||||    
T  369 ttcaaaatcttgtatttttcatgcgttccttgttgtttaagcttgcttgtgaactc-aaaacatcatgaaaatgacactaaaaataaagaatgactgact 467  T
Q  510 atcatcatca 519  Q
     |||||||||    
T  468 ttcatcatca 477  T

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Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 172 - 254
Target Start/End: Complemental strand, 49311 - 49227
Alignment:
Q  172 ccagcgtgagttaactcgc--gtatgtgttaatttcagcgtgagataattcatgcagcgtgatttaagtcacgcatgtgtaaaaa 254  Q
    ||||||||||||||||| |  | | ||||||||| | | ||||| ||| |||||| ||||||||||||||| |||||||||||||    
T  49311 ccagcgtgagttaactctcacgcaagtgttaattcctgtgtgagttaactcatgcggcgtgatttaagtcatgcatgtgtaaaaa 49227  T

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