View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3470_high_72 (Length: 241)
Name: NF3470_high_72
Description: NF3470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3470_high_72 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 16 - 241
Target Start/End: Complemental strand, 40368669 - 40368444
Alignment:
| Q |
16 |
tccttttttacatgatttatcaacatatgaagatatttttagaaagagaccataaaattttggattgtatctcatttttcgcgcacaattgctgagacta |
115 |
Q |
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| T |
40368669 |
tccttttttacatgatttatcaacatatgaagatatttttagaaagagaccataaaattttggattgtatctcatttttcgtgcacaattgctgagacta |
40368570 |
T |
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| Q |
116 |
aattcttcaaagttttaaatgatcgactcttcaaaaccggtgaattttgatatacataattcagataaaaaacctgatcacatgatgcttcacaaactta |
215 |
Q |
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| T |
40368569 |
aattcttcaaagttttaaatgatcgactcttcaaaaccggtgaattttgatatacataattcagataaaaaacctgatcacatgatgcttcacaaactta |
40368470 |
T |
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| Q |
216 |
agagatccaagtggcttatttgtacc |
241 |
Q |
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|||||||||||||||||||||||||| |
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| T |
40368469 |
agagatccaagtggcttatttgtacc |
40368444 |
T |
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