View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3470_low_70 (Length: 244)

Name: NF3470_low_70
Description: NF3470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3470_low_70
NF3470_low_70
[»] chr3 (47 HSPs)
chr3 (1-240)||(53070360-53070600)
chr3 (26-244)||(42386655-42386875)
chr3 (1-240)||(17247947-17248188)
chr3 (33-238)||(40213384-40213591)
chr3 (96-240)||(11424424-11424569)
chr3 (57-129)||(54973660-54973733)
chr3 (57-129)||(54976270-54976343)
chr3 (57-129)||(54978880-54978953)
chr3 (32-137)||(2050964-2051070)
chr3 (95-240)||(14572902-14573048)
chr3 (26-159)||(25476128-25476262)
chr3 (80-136)||(37250932-37250988)
chr3 (46-137)||(52523492-52523584)
chr3 (95-240)||(12933971-12934117)
chr3 (26-140)||(14973098-14973213)
chr3 (95-240)||(18438848-18438994)
chr3 (191-244)||(20698104-20698157)
chr3 (99-244)||(14234809-14234954)
chr3 (7-73)||(23274913-23274979)
chr3 (80-137)||(324534-324591)
chr3 (191-244)||(14179733-14179786)
chr3 (196-244)||(12399611-12399659)
chr3 (95-240)||(32307983-32308128)
chr3 (96-139)||(839543-839586)
chr3 (26-140)||(14576595-14576710)
chr3 (72-137)||(1465174-1465240)
chr3 (95-137)||(1644447-1644489)
chr3 (96-138)||(16097645-16097687)
chr3 (174-244)||(23275135-23275205)
chr3 (202-244)||(30030250-30030292)
chr3 (95-137)||(49667848-49667890)
chr3 (191-240)||(9513321-9513370)
chr3 (191-240)||(9521296-9521345)
chr3 (96-129)||(13210100-13210133)
chr3 (175-244)||(14501594-14501663)
chr3 (191-240)||(14973265-14973314)
chr3 (80-137)||(15471224-15471281)
chr3 (95-140)||(17488170-17488215)
chr3 (95-140)||(20698199-20698244)
chr3 (96-129)||(24188074-24188107)
chr3 (95-140)||(26687200-26687245)
chr3 (96-129)||(28350937-28350970)
chr3 (96-129)||(55149275-55149308)
chr3 (97-137)||(12171869-12171909)
chr3 (174-238)||(21837894-21837958)
chr3 (96-136)||(22110116-22110156)
chr3 (97-129)||(23083135-23083167)
[»] chr6 (35 HSPs)
chr6 (1-240)||(18456934-18457174)
chr6 (26-240)||(19303202-19303418)
chr6 (83-244)||(23019709-23019871)
chr6 (95-240)||(28496134-28496280)
chr6 (57-129)||(8523206-8523279)
chr6 (96-244)||(22080394-22080543)
chr6 (2-129)||(25644542-25644670)
chr6 (80-244)||(27332941-27333106)
chr6 (80-244)||(27393681-27393846)
chr6 (57-129)||(15685874-15685947)
chr6 (18-240)||(18409488-18409712)
chr6 (26-240)||(29060784-29061000)
chr6 (95-240)||(29808544-29808691)
chr6 (26-140)||(20594017-20594132)
chr6 (80-137)||(4667978-4668035)
chr6 (80-136)||(19668672-19668728)
chr6 (191-244)||(1561714-1561767)
chr6 (96-137)||(4185588-4185629)
chr6 (191-244)||(20637951-20638004)
chr6 (96-140)||(18821582-18821626)
chr6 (197-244)||(16920301-16920348)
chr6 (98-137)||(19652512-19652551)
chr6 (96-134)||(25928594-25928632)
chr6 (99-137)||(25956386-25956424)
chr6 (80-125)||(4189255-4189300)
chr6 (80-125)||(4674837-4674882)
chr6 (95-140)||(16920396-16920441)
chr6 (191-240)||(17287457-17287506)
chr6 (95-140)||(20360723-20360768)
chr6 (191-240)||(22779888-22779937)
chr6 (96-140)||(15894193-15894237)
chr6 (196-244)||(18821487-18821535)
chr6 (208-244)||(22831919-22831955)
chr6 (196-244)||(25611380-25611428)
chr6 (96-140)||(25611486-25611530)
[»] scaffold0503 (1 HSPs)
scaffold0503 (1-240)||(12148-12388)
[»] chr7 (43 HSPs)
chr7 (1-240)||(12756378-12756618)
chr7 (1-240)||(17061621-17061862)
chr7 (26-240)||(38227724-38227940)
chr7 (32-238)||(12255454-12255662)
chr7 (27-241)||(15143697-15143913)
chr7 (1-240)||(44116724-44116964)
chr7 (69-244)||(16219373-16219550)
chr7 (57-129)||(16006692-16006765)
chr7 (26-137)||(2279883-2279995)
chr7 (58-129)||(21743059-21743131)
chr7 (95-240)||(810790-810936)
chr7 (69-137)||(16056615-16056684)
chr7 (33-239)||(3564026-3564234)
chr7 (57-129)||(8776634-8776707)
chr7 (80-137)||(22073215-22073272)
chr7 (80-244)||(47832108-47832272)
chr7 (26-136)||(15008263-15008375)
chr7 (202-244)||(34201205-34201247)
chr7 (191-244)||(15754544-15754597)
chr7 (191-244)||(16385915-16385968)
chr7 (95-140)||(26212309-26212354)
chr7 (191-244)||(40443788-40443841)
chr7 (188-244)||(11995715-11995771)
chr7 (72-134)||(68036-68099)
chr7 (96-135)||(9389462-9389501)
chr7 (95-240)||(9509502-9509649)
chr7 (32-136)||(14036448-14036554)
chr7 (32-136)||(14346478-14346584)
chr7 (175-244)||(2529634-2529703)
chr7 (96-129)||(11262625-11262658)
chr7 (96-129)||(11548043-11548076)
chr7 (96-129)||(11554639-11554672)
chr7 (96-129)||(12692792-12692825)
chr7 (191-240)||(12699243-12699292)
chr7 (96-129)||(14953494-14953527)
chr7 (96-129)||(14959460-14959493)
chr7 (69-129)||(16324293-16324354)
chr7 (191-244)||(27847501-27847554)
chr7 (191-244)||(28504958-28505011)
chr7 (95-140)||(40443702-40443747)
chr7 (96-137)||(44014489-44014530)
chr7 (32-134)||(14044998-14045102)
chr7 (32-134)||(14355028-14355132)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-240)||(20087-20327)
[»] chr4 (39 HSPs)
chr4 (1-240)||(21815293-21815532)
chr4 (32-240)||(21814964-21815173)
chr4 (32-240)||(21818386-21818595)
chr4 (1-140)||(44102429-44102569)
chr4 (1-240)||(44928584-44928825)
chr4 (3-137)||(52242958-52243093)
chr4 (26-238)||(15091140-15091355)
chr4 (26-240)||(14038892-14039109)
chr4 (26-137)||(15464694-15464807)
chr4 (80-244)||(39705945-39706109)
chr4 (58-129)||(4171299-4171371)
chr4 (58-129)||(14698991-14699063)
chr4 (57-129)||(41791946-41792019)
chr4 (95-240)||(16377183-16377329)
chr4 (191-240)||(22636845-22636894)
chr4 (19-140)||(44053066-44053187)
chr4 (95-140)||(7089190-7089235)
chr4 (191-244)||(14052970-14053023)
chr4 (96-137)||(15099665-15099706)
chr4 (191-244)||(16597056-16597109)
chr4 (95-140)||(17047835-17047880)
chr4 (95-137)||(12774313-12774355)
chr4 (96-244)||(13844854-13845003)
chr4 (72-129)||(15190607-15190665)
chr4 (202-240)||(44053251-44053289)
chr4 (95-140)||(3096956-3097001)
chr4 (95-140)||(7799010-7799055)
chr4 (96-129)||(8846689-8846722)
chr4 (95-140)||(12903070-12903115)
chr4 (96-129)||(14679259-14679292)
chr4 (96-129)||(14685468-14685501)
chr4 (191-244)||(15552224-15552277)
chr4 (191-240)||(16239653-16239702)
chr4 (96-129)||(23838730-23838763)
chr4 (96-129)||(35614236-35614269)
chr4 (96-129)||(41385521-41385554)
chr4 (208-244)||(13812466-13812502)
chr4 (168-244)||(15868292-15868368)
chr4 (174-242)||(43198247-43198315)
[»] chr5 (30 HSPs)
chr5 (1-240)||(36154489-36154730)
chr5 (1-240)||(11580906-11581147)
chr5 (26-238)||(22144294-22144508)
chr5 (26-244)||(1096711-1096931)
chr5 (57-129)||(26496160-26496232)
chr5 (26-234)||(9078196-9078406)
chr5 (57-129)||(29324994-29325067)
chr5 (72-244)||(21329152-21329326)
chr5 (26-240)||(21985808-21986024)
chr5 (72-137)||(5888940-5889006)
chr5 (13-244)||(21871228-21871462)
chr5 (13-244)||(21875508-21875742)
chr5 (96-240)||(22959194-22959339)
chr5 (26-240)||(25421776-25421992)
chr5 (191-244)||(19660494-19660547)
chr5 (191-244)||(22075419-22075472)
chr5 (89-137)||(21501919-21501967)
chr5 (95-240)||(23390157-23390304)
chr5 (96-134)||(15441725-15441763)
chr5 (96-134)||(25744036-25744074)
chr5 (191-240)||(19669311-19669360)
chr5 (203-244)||(21292638-21292679)
chr5 (95-140)||(21292733-21292778)
chr5 (96-129)||(21295039-21295072)
chr5 (100-137)||(21741308-21741345)
chr5 (95-140)||(22075332-22075377)
chr5 (95-140)||(22107136-22107181)
chr5 (96-129)||(23337064-23337097)
chr5 (96-129)||(25535285-25535318)
chr5 (80-137)||(26011799-26011856)
[»] scaffold0056 (3 HSPs)
scaffold0056 (1-124)||(79107-79231)
scaffold0056 (95-240)||(16876-17022)
scaffold0056 (154-244)||(79019-79109)
[»] chr8 (38 HSPs)
chr8 (1-240)||(41598403-41598644)
chr8 (80-244)||(6520667-6520832)
chr8 (1-240)||(19801088-19801329)
chr8 (57-129)||(21415000-21415073)
chr8 (26-240)||(6759500-6759717)
chr8 (57-129)||(7300836-7300909)
chr8 (80-244)||(38854908-38855072)
chr8 (58-129)||(6608028-6608100)
chr8 (57-129)||(45134679-45134752)
chr8 (26-140)||(16092103-16092218)
chr8 (80-137)||(39834131-39834188)
chr8 (95-244)||(20536521-20536672)
chr8 (26-140)||(22875309-22875424)
chr8 (191-244)||(5865934-5865987)
chr8 (191-244)||(17141324-17141377)
chr8 (80-137)||(21285897-21285954)
chr8 (191-244)||(21491403-21491456)
chr8 (95-140)||(21918763-21918808)
chr8 (95-140)||(23406694-23406739)
chr8 (191-244)||(45130688-45130741)
chr8 (196-240)||(21923589-21923633)
chr8 (7-73)||(13507914-13507980)
chr8 (7-73)||(13597446-13597512)
chr8 (191-240)||(7373160-7373209)
chr8 (95-140)||(18818172-18818217)
chr8 (191-240)||(18878898-18878947)
chr8 (96-129)||(20527746-20527779)
chr8 (191-240)||(22627146-22627195)
chr8 (191-240)||(23406792-23406841)
chr8 (191-240)||(23648964-23649013)
chr8 (95-140)||(25362903-25362948)
chr8 (196-240)||(18818071-18818115)
chr8 (212-244)||(21389110-21389142)
chr8 (212-244)||(21395640-21395672)
chr8 (97-137)||(21674021-21674061)
chr8 (212-244)||(21790133-21790165)
chr8 (196-244)||(31971660-31971708)
chr8 (96-136)||(37116664-37116704)
[»] chr1 (28 HSPs)
chr1 (5-240)||(433230-433467)
chr1 (26-239)||(50209875-50210090)
chr1 (57-129)||(20579739-20579812)
chr1 (33-136)||(26065190-26065295)
chr1 (72-244)||(22921524-22921698)
chr1 (26-240)||(22532513-22532729)
chr1 (26-135)||(16758895-16759005)
chr1 (69-138)||(52927745-52927815)
chr1 (95-239)||(34510094-34510239)
chr1 (32-130)||(35260851-35260951)
chr1 (96-137)||(20637165-20637206)
chr1 (191-244)||(22355842-22355895)
chr1 (191-244)||(22357528-22357581)
chr1 (191-244)||(27250397-27250450)
chr1 (95-140)||(38801154-38801199)
chr1 (192-244)||(21342560-21342612)
chr1 (192-244)||(21347425-21347477)
chr1 (81-137)||(33681309-33681365)
chr1 (168-243)||(41049626-41049701)
chr1 (95-137)||(21754350-21754392)
chr1 (83-137)||(28194213-28194267)
chr1 (96-137)||(20248592-20248633)
chr1 (191-240)||(20846891-20846940)
chr1 (96-129)||(21438091-21438124)
chr1 (99-140)||(22354335-22354376)
chr1 (96-129)||(23763508-23763541)
chr1 (96-137)||(35981451-35981492)
chr1 (196-240)||(21301199-21301243)
[»] scaffold0413 (1 HSPs)
scaffold0413 (1-240)||(15276-15517)
[»] scaffold0839 (1 HSPs)
scaffold0839 (33-240)||(1739-1947)
[»] scaffold0217 (1 HSPs)
scaffold0217 (26-240)||(16260-16477)
[»] scaffold0142 (1 HSPs)
scaffold0142 (1-240)||(16999-17240)
[»] chr2 (27 HSPs)
chr2 (57-129)||(21238880-21238952)
chr2 (57-129)||(21241430-21241502)
chr2 (57-129)||(24504977-24505049)
chr2 (26-240)||(22337359-22337575)
chr2 (57-129)||(31503873-31503946)
chr2 (57-129)||(31506439-31506512)
chr2 (95-240)||(298476-298622)
chr2 (95-240)||(23660336-23660482)
chr2 (32-140)||(23076692-23076800)
chr2 (191-244)||(23286261-23286314)
chr2 (1-73)||(19672047-19672118)
chr2 (97-240)||(22133878-22134020)
chr2 (80-136)||(23207578-23207634)
chr2 (33-136)||(20519957-20520062)
chr2 (83-136)||(22412900-22412953)
chr2 (191-244)||(23071620-23071673)
chr2 (196-243)||(37785-37832)
chr2 (72-138)||(25176132-25176199)
chr2 (47-136)||(23005015-23005105)
chr2 (99-137)||(28406297-28406335)
chr2 (191-240)||(22730894-22730943)
chr2 (191-244)||(23654067-23654120)
chr2 (191-244)||(28291959-28292012)
chr2 (96-129)||(31756232-31756265)
chr2 (95-140)||(32451692-32451737)
chr2 (192-244)||(19672314-19672366)
chr2 (95-139)||(23286174-23286218)
[»] scaffold0138 (2 HSPs)
scaffold0138 (69-244)||(13227-13404)
scaffold0138 (96-129)||(29983-30016)
[»] scaffold0357 (1 HSPs)
scaffold0357 (26-134)||(15866-15976)
[»] scaffold0141 (1 HSPs)
scaffold0141 (26-159)||(39720-39854)
[»] scaffold0049 (1 HSPs)
scaffold0049 (26-159)||(74958-75092)
[»] scaffold0525 (1 HSPs)
scaffold0525 (57-129)||(9445-9518)
[»] scaffold0120 (2 HSPs)
scaffold0120 (26-243)||(32617-32836)
scaffold0120 (26-243)||(46169-46388)
[»] scaffold0012 (1 HSPs)
scaffold0012 (2-137)||(225627-225763)
[»] scaffold0228 (3 HSPs)
scaffold0228 (26-240)||(4751-4968)
scaffold0228 (26-240)||(12333-12550)
scaffold0228 (26-240)||(22285-22502)
[»] scaffold0586 (1 HSPs)
scaffold0586 (57-129)||(2128-2201)
[»] scaffold0145 (1 HSPs)
scaffold0145 (95-240)||(39074-39219)
[»] scaffold0100 (1 HSPs)
scaffold0100 (93-240)||(20424-20572)
[»] scaffold0130 (1 HSPs)
scaffold0130 (26-140)||(28074-28189)
[»] scaffold0292 (2 HSPs)
scaffold0292 (95-240)||(656-802)
scaffold0292 (95-238)||(3783-3928)
[»] scaffold0475 (1 HSPs)
scaffold0475 (80-137)||(9375-9432)
[»] scaffold0084 (1 HSPs)
scaffold0084 (26-79)||(10407-10460)
[»] scaffold0737 (1 HSPs)
scaffold0737 (80-136)||(1562-1618)
[»] scaffold0320 (1 HSPs)
scaffold0320 (154-238)||(12369-12453)
[»] scaffold0218 (2 HSPs)
scaffold0218 (69-136)||(7841-7909)
scaffold0218 (191-244)||(28937-28990)
[»] scaffold0122 (1 HSPs)
scaffold0122 (26-240)||(25726-25942)
[»] scaffold0080 (2 HSPs)
scaffold0080 (95-159)||(40226-40290)
scaffold0080 (80-136)||(19649-19705)
[»] scaffold0064 (1 HSPs)
scaffold0064 (196-244)||(47391-47439)
[»] scaffold0010 (2 HSPs)
scaffold0010 (80-136)||(60479-60535)
scaffold0010 (96-129)||(242354-242387)
[»] scaffold0211 (1 HSPs)
scaffold0211 (95-240)||(28470-28616)
[»] scaffold0028 (1 HSPs)
scaffold0028 (95-240)||(132967-133113)
[»] scaffold0628 (1 HSPs)
scaffold0628 (95-137)||(2567-2609)
[»] scaffold0556 (2 HSPs)
scaffold0556 (96-240)||(7126-7271)
scaffold0556 (83-244)||(8318-8480)
[»] scaffold0305 (1 HSPs)
scaffold0305 (96-240)||(20717-20863)
[»] scaffold0034 (1 HSPs)
scaffold0034 (72-137)||(32826-32892)
[»] scaffold1984 (1 HSPs)
scaffold1984 (80-137)||(429-486)
[»] scaffold1842 (2 HSPs)
scaffold1842 (191-244)||(717-770)
scaffold1842 (95-140)||(812-857)
[»] scaffold0876 (1 HSPs)
scaffold0876 (191-244)||(2742-2795)
[»] scaffold0598 (2 HSPs)
scaffold0598 (191-244)||(720-773)
scaffold0598 (95-140)||(815-860)
[»] scaffold0456 (1 HSPs)
scaffold0456 (191-244)||(10094-10147)
[»] scaffold0403 (2 HSPs)
scaffold0403 (191-244)||(5248-5301)
scaffold0403 (95-140)||(5161-5206)
[»] scaffold0389 (1 HSPs)
scaffold0389 (191-244)||(13265-13318)
[»] scaffold0358 (4 HSPs)
scaffold0358 (191-244)||(336-389)
scaffold0358 (191-244)||(5112-5165)
scaffold0358 (99-140)||(253-294)
scaffold0358 (99-140)||(5029-5070)
[»] scaffold0351 (1 HSPs)
scaffold0351 (191-244)||(16679-16732)
[»] scaffold0175 (2 HSPs)
scaffold0175 (191-244)||(34531-34584)
scaffold0175 (95-140)||(13405-13450)
[»] scaffold0161 (1 HSPs)
scaffold0161 (191-244)||(2102-2155)
[»] scaffold0125 (1 HSPs)
scaffold0125 (96-137)||(45555-45596)
[»] scaffold0070 (1 HSPs)
scaffold0070 (26-244)||(4767-4987)
[»] scaffold0011 (3 HSPs)
scaffold0011 (191-244)||(167647-167700)
scaffold0011 (95-240)||(52225-52372)
scaffold0011 (95-140)||(167742-167787)
[»] scaffold0507 (1 HSPs)
scaffold0507 (94-244)||(7714-7865)
[»] scaffold0427 (1 HSPs)
scaffold0427 (196-244)||(13900-13948)
[»] scaffold0021 (4 HSPs)
scaffold0021 (80-136)||(136132-136188)
scaffold0021 (80-136)||(144840-144896)
scaffold0021 (95-140)||(124898-124943)
scaffold0021 (191-240)||(124993-125042)
[»] scaffold0003 (1 HSPs)
scaffold0003 (95-159)||(339694-339758)
[»] scaffold0395 (1 HSPs)
scaffold0395 (95-240)||(623-770)
[»] scaffold0352 (1 HSPs)
scaffold0352 (191-242)||(17667-17718)
[»] scaffold0078 (1 HSPs)
scaffold0078 (94-137)||(10841-10884)
[»] scaffold0016 (1 HSPs)
scaffold0016 (95-240)||(2164-2311)
[»] scaffold0490 (1 HSPs)
scaffold0490 (95-141)||(2265-2311)
[»] scaffold0309 (1 HSPs)
scaffold0309 (95-141)||(6923-6969)
[»] scaffold0259 (1 HSPs)
scaffold0259 (96-134)||(10474-10512)
[»] scaffold0233 (1 HSPs)
scaffold0233 (96-134)||(14311-14349)
[»] scaffold0113 (1 HSPs)
scaffold0113 (202-244)||(32475-32517)
[»] scaffold0718 (1 HSPs)
scaffold0718 (191-244)||(4799-4852)
[»] scaffold0647 (1 HSPs)
scaffold0647 (191-240)||(5782-5831)
[»] scaffold0423 (1 HSPs)
scaffold0423 (203-244)||(10929-10970)
[»] scaffold0266 (1 HSPs)
scaffold0266 (191-240)||(18619-18668)
[»] scaffold0261 (1 HSPs)
scaffold0261 (191-240)||(16069-16118)
[»] scaffold0235 (1 HSPs)
scaffold0235 (191-244)||(11181-11234)
[»] scaffold0193 (1 HSPs)
scaffold0193 (95-140)||(13524-13569)
[»] scaffold0165 (2 HSPs)
scaffold0165 (95-140)||(3794-3839)
scaffold0165 (95-140)||(7858-7903)
[»] scaffold0102 (2 HSPs)
scaffold0102 (80-137)||(19565-19622)
scaffold0102 (211-244)||(48118-48151)
[»] scaffold0013 (1 HSPs)
scaffold0013 (96-129)||(9637-9670)
[»] scaffold0004 (1 HSPs)
scaffold0004 (96-129)||(58194-58227)
[»] scaffold0555 (1 HSPs)
scaffold0555 (93-137)||(10305-10349)
[»] scaffold0367 (1 HSPs)
scaffold0367 (208-244)||(1318-1354)
[»] scaffold0022 (1 HSPs)
scaffold0022 (96-136)||(128735-128775)


Alignment Details
Target: chr3 (Bit Score: 137; Significance: 1e-71; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 53070600 - 53070360
Alignment:
Q  1 tatatataatattcataactatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggcttctgtaattgggcaactcg 99  Q
    |||||| |||||||||||||| || ||||| ||||||| ||| | |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||    
T  53070600 tatatacaatattcataactaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaaggcttctgtaattgggcaactcg 53070501  T
Q  100 cgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattcttaattaatccaggctcaatcttaatctgaagtcttgccta 199  Q
    ||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||| | |||  | |||| ||||    
T  53070500 cgaggcgagagcctctactcgccatggcgagttcaggtcagcttccaaaaagttcattcttaattaatccaggttcaatctcattctacattctttccta 53070401  T
Q  200 accattactagacatcttcagacactcaaaagcatctaagg 240  Q
    | ||||| || |||| ||||| |||||||||||||||||||    
T  53070400 atcattattaaacatgttcaggcactcaaaagcatctaagg 53070360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 26 - 244
Target Start/End: Original strand, 42386655 - 42386875
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| ||||||  ||||| |||||||||| || |||| ||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  42386655 aaggttcaactcacaacaactcgtgcgacaaagttcgcaaaatcctaaacaaggcttctgtaattgggcaactcgcgaggtgagagcctctactcgccat 42386754  T
Q  125 ggcgaattcaggt-cagcttcgaaaaagttcattcttaattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagaca 223  Q
    ||||| |||||||  | || | ||||  ||||||||||| || | |||| ||||||  | ||| ||||||||||||| ||||| ||  ||| ||||  ||    
T  42386755 ggcgagttcaggtataactcccaaaagtttcattcttaactatttcaggttcaatcacagtctaaagtcttgcctaatcattattatgcatgttcatgca 42386854  T
Q  224 ctcaaaagcatctaaggttca 244  Q
    |||| || || ||||||||||    
T  42386855 ctcataaacaactaaggttca 42386875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 17248188 - 17247947
Alignment:
Q  1 tatatataatattcataactatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggcttctgtaattgggcaactcg 99  Q
    ||||||||||||||||||| | || |||||  |||||| ||| | |||||||||| ||||||| |||| |||| ||||  |||||||| ||||  |||||    
T  17248188 tatatataatattcataacgaccccaaggtttaactctcaacgactcgtgcgacaaagatcgcaaaattctaaacaagcattctgtaactgggtcactcg 17248089  T
Q  100 cgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattct-taattaatccaggctcaatcttaatctgaagtcttgcct 198  Q
    ||||||||||| |||| ||||||||||||| |||||||||| |||  |||  ||||||||  |||   |||||| ||||||| | |||  | |||| |||    
T  17248088 cgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaatctcattctacattctttcct 17247989  T
Q  199 aaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    || ||||| ||||||| ||||| ||||||||| |||||||||    
T  17247988 aatcattattagacatgttcaggcactcaaaaacatctaagg 17247947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 33 - 238
Target Start/End: Complemental strand, 40213591 - 40213384
Alignment:
Q  33 aactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggct-tctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaat 131  Q
    |||||| ||||| |||||| ||| || |||| |||||||||||||||  |||||   ||||  |||||||||||||||| |||| |||||| |||||| |    
T  40213591 aactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgtggcgagt 40213492  T
Q  132 tcaggtcagcttcgaaaaagttcattct-taattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagacactcaaaa 230  Q
    |||||| || |||  |||||||||||||  |||   |||||| ||||||| |  ||  | |||| ||||| ||||| ||||||| ||||| |||||||||    
T  40213491 tcaggttagattcccaaaagttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaa 40213392  T
Q  231 gcatctaa 238  Q
    ||||||||    
T  40213391 gcatctaa 40213384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 240
Target Start/End: Complemental strand, 11424569 - 11424424
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcgaattcaggtcag-cttcgaaaaagttcattcttaattaatccaggctcaatcttaatctgaagtctt 194  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||||  ||| ||||  |||||||| |||   |||||| ||||||| | |||  | | ||    
T  11424569 ctcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagagttcaaaaagtttcattctaaatctttccaggttcaatctcattctacattatt 11424470  T
Q  195 gcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
     ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  11424469 tcctaatcattattagacatgttcaggcactcaaaagcatctaagg 11424424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 54973660 - 54973733
Alignment:
Q  57 agatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    ||||||| ||||||||| ||||||||||| ||| || |||||||||||||||||| ||||||||||||||||||    
T  54973660 agatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcga 54973733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 54976270 - 54976343
Alignment:
Q  57 agatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    ||||||| ||||||||| ||||||||||| ||| || |||||||||||||||||| ||||||||||||||||||    
T  54976270 agatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcga 54976343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 54978880 - 54978953
Alignment:
Q  57 agatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    ||||||| ||||||||| ||||||||||| ||| || |||||||||||||||||| ||||||||||||||||||    
T  54978880 agatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcga 54978953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 137
Target Start/End: Complemental strand, 2051070 - 2050964
Alignment:
Q  32 caactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaa 130  Q
    ||||||| ||||| || ||||||| ||||||| ||||||||| ||||  || ||||| |||||||||| ||||||||||| |||||||||| |||| ||     
T  2051070 caactctcaacaactcatgcgacaaagatcgcaaaatcctaaacaagcattttgtaactgggcaactcacgaggcgagagcctctactcgctatggagag 2050971  T
Q  131 ttcaggt 137  Q
    |||||||    
T  2050970 ttcaggt 2050964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 240
Target Start/End: Original strand, 14572902 - 14573048
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag-cttcgaaaaagttcattcttaattaatccaggctcaatcttaatctgaagtct 193  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||  ||| |||   |||||||| | |   |||||| ||||||| | |||  | |||    
T  14572902 actcgcgaggcgagagcctctactcgccatggcgagttcaggtcagatttccaaaggtttcattctaagtctttccaggttcaatctcattctacattct 14573001  T
Q  194 tgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    | ||||| ||||| ||||||| ||||| |||||||| ||||||||||    
T  14573002 ttcctaatcattattagacatgttcaggcactcaaaggcatctaagg 14573048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 159
Target Start/End: Complemental strand, 25476262 - 25476128
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggct-tctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| ||||||| ||||| |||||| ||| || |||| |||||||||||||||  |||||   ||||  |||||||||||||||| ||||||||| | |    
T  25476262 aaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctactcgtcgt 25476163  T
Q  125 ggcgaattcaggtcagcttcgaaaaagttcattct 159  Q
    ||||| |||||||||| ||| ||||  ||||||||    
T  25476162 ggcgagttcaggtcagattccaaaagtttcattct 25476128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 37250988 - 37250932
Alignment:
Q  80 ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcagg 136  Q
    |||||||| |||||||||||||||||||||| |||||||||| ||||||| ||||||    
T  37250988 ttctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgagttcagg 37250932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 137
Target Start/End: Complemental strand, 52523584 - 52523492
Alignment:
Q  46 tcgtgcgacacagatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    |||||||||| ||||||| ||||||||| ||||  |||||||| |||||||||||  ||||||| | |||||||||| ||||||| |||||||    
T  52523584 tcgtgcgacaaagatcgcaaaatcctaaacaagcattctgtaactgggcaactcgtcaggcgagggcctctactcgctatggcgagttcaggt 52523492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 95 - 240
Target Start/End: Complemental strand, 12934117 - 12933971
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcagg-tcagcttcgaaaaagttcattct-taattaatccaggctcaatcttaatctgaagtc 192  Q
    ||||||||||||||||||||| ||||||||||||| |||||| |||| |||  |||| ||||||||  |||   |||||| ||||||| | |||  | ||    
T  12934117 actcgcgaggcgagagtctctgctcgccatggcgagttcaggttcag-ttcacaaaatttcattctaaaatctttccaggttcaatctcattctctaatc 12934019  T
Q  193 ttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    || ||||| ||||| ||||||| ||||| ||||||||| |||||||||    
T  12934018 tttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 12933971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 14973098 - 14973213
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| ||||||||| ||| | |||||||||| ||||| |||||||||||||||  |||||   ||||  ||| |||||||||||| |||| |||||| |    
T  14973098 aaggttcaactcttagcaacttgtgcgacacaaatcgcaaaatcctaacaaggcactctgtttctgggtcacttgcgaggcgagagcctctgctcgccgt 14973197  T
Q  125 ggcgaattcaggtcag 140  Q
    ||||| ||||||||||    
T  14973198 ggcgagttcaggtcag 14973213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 240
Target Start/End: Original strand, 18438848 - 18438994
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcagc-ttcgaaaaagttcattcttaattaatccaggctcaatcttaatctgaagtct 193  Q
    |||||||||||||||| |||| |||||| |||| | ||||||||||  ||| ||||  |||||||| |||   |||||| ||||||| | | |  | |||    
T  18438848 actcgcgaggcgagagcctctgctcgccgtggcaacttcaggtcagaattccaaaagtttcattctaaatctttccaggttcaatctcattttacattct 18438947  T
Q  194 tgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    | ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  18438948 ttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 18438994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 20698157 - 20698104
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| |||||||||||||||||||||||||||||    
T  20698157 tctttcctaatcattattagacatgttcagacactcaaaagcatctaaggttca 20698104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 244
Target Start/End: Original strand, 14234809 - 14234954
Alignment:
Q  99 gcgaggcgagagtctctactcgccatggcgaattcaggt-cagcttcgaaaaagttcattcttaattaatccaggctcaatcttaatctgaagtcttgcc 197  Q
    |||||||||| | |||||||||||||||||| ||||||| || || | ||||| ||||||||||| || | | || ||||||| |||||  | |||| ||    
T  14234809 gcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcccaaaaa-ttcattcttaactatttcgggttcaatctcaatctataatctttcc 14234907  T
Q  198 taaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    ||| ||| | || |||| ||||| |||||||||  ||||||||||||    
T  14234908 taatcatcattatacatgttcaggcactcaaaaaaatctaaggttca 14234954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 23274913 - 23274979
Alignment:
Q  7 taatattcataactatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaa 73  Q
    |||||||||||||||||| ||||  ||||||| ||||| |||||||||| ||||||| ||| |||||    
T  23274913 taatattcataactatcccaaggctcaactctcaacaactcgtgcgacaaagatcgcaaaaacctaa 23274979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 324534 - 324591
Alignment:
Q  80 ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    |||||||| | || ||||||||||||||||| |||||||||| ||||||| |||||||    
T  324534 ttctgtaacttggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggt 324591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 14179733 - 14179786
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  14179733 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 14179786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 12399611 - 12399659
Alignment:
Q  196 cctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  12399611 cctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 12399659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 240
Target Start/End: Original strand, 32307983 - 32308128
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcagg-tcagcttcgaaaaagttcattcttaattaatcc-aggctcaatcttaatctgaagtc 192  Q
    |||||||||||||||| |||| ||||||||||||| |||||| |||| | | ||||  |||||||| || |  ||| ||| ||||||| | |||  | ||    
T  32307983 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcagttcccaaaa--ttcattctaaagtcttcctaggttcaatctcattctccaatc 32308080  T
Q  193 ttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    || ||||| ||||| |||| || ||||| |||||||||||||||||||    
T  32308081 tttcctaatcattattagatatgttcaggcactcaaaagcatctaagg 32308128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 139
Target Start/End: Original strand, 839543 - 839586
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcgaattcaggtca 139  Q
    |||||||||||||||| ||||||||||||||||| |||| ||||    
T  839543 ctcgcgaggcgagagtatctactcgccatggcgagttcaagtca 839586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 140
Target Start/End: Complemental strand, 14576710 - 14576595
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggct-tctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| ||||||| ||||| |||||| ||| || |||| |||||||||||||||  | |||   | ||  |||||||||||||||| ||||||||||| |    
T  14576710 aaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactttgtttctaggtcactcgcgaggcgagagcctctactcgccgt 14576611  T
Q  125 ggcgaattcaggtcag 140  Q
    ||||  ||||||||||    
T  14576610 ggcgtgttcaggtcag 14576595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 1465240 - 1465174
Alignment:
Q  72 aacaaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    |||||||| |||||||| |||  | ||||||||||||||| |||||||||||||||| | |||||||    
T  1465240 aacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcaagttcaggt 1465174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 137
Target Start/End: Complemental strand, 1644489 - 1644447
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    |||||||||||||||| |||| ||||||||||||| |||||||    
T  1644489 actcgcgaggcgagagcctctgctcgccatggcgagttcaggt 1644447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 16097645 - 16097687
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcgaattcaggtc 138  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||    
T  16097645 ctcgcgaggcgagagcctctactcaccatggcgagttcaggtc 16097687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 244
Target Start/End: Original strand, 23275135 - 23275205
Alignment:
Q  174 tcaatcttaatctgaagtcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    ||||||| ||||| ||  ||||||||| ||||| || |||| ||||| ||||||||| |||||||||||||    
T  23275135 tcaatctcaatctaaaaacttgcctaatcattattatacatattcaggcactcaaaatcatctaaggttca 23275205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 30030250 - 30030292
Alignment:
Q  202 cattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    ||||| ||||||| |||||||||||||| ||||||||||||||    
T  30030250 cattattagacatgttcagacactcaaaggcatctaaggttca 30030292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 137
Target Start/End: Complemental strand, 49667890 - 49667848
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    |||||||||||||||| |||| ||||||||||||| |||||||    
T  49667890 actcgcgaggcgagagcctctgctcgccatggcgagttcaggt 49667848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 9513321 - 9513370
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  9513321 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 9513370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 9521296 - 9521345
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  9521296 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 9521345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 13210133 - 13210100
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcga 129  Q
    ||||||||||||||| ||||||||||||||||||    
T  13210133 ctcgcgaggcgagagcctctactcgccatggcga 13210100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 244
Target Start/End: Original strand, 14501594 - 14501663
Alignment:
Q  175 caatcttaatctgaagtcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||||| ||||| ||  ||||||||| ||||| || |||| ||||| ||||||||| |||||||||||||    
T  14501594 caatctcaatctaaaaccttgcctaatcattattatacatattcaggcactcaaaatcatctaaggttca 14501663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 14973265 - 14973314
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  14973265 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 14973314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 15471224 - 15471281
Alignment:
Q  80 ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    |||||||| ||||||  || ||||||||| | |||||||||||||||||| |||||||    
T  15471224 ttctgtaactgggcagttcacgaggcgagggcctctactcgccatggcgagttcaggt 15471281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 17488170 - 17488215
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||||||||||||| |||| |||||| |||||| ||||||||||    
T  17488170 actcgcgaggcgagagcctctgctcgccgtggcgatttcaggtcag 17488215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 20698244 - 20698199
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||||||||||||| |||| |||||| |||||| ||||||||||    
T  20698244 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcag 20698199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 24188074 - 24188107
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||||||||||||| |||||||||||||||||    
T  24188074 ctcgcgaggcgagagtatctactcgccatggcga 24188107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 26687200 - 26687245
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||||||||||||| |||| |||||| |||||| ||||||||||    
T  26687200 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcag 26687245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 28350970 - 28350937
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||||||||||||| |||||||||||||||||    
T  28350970 ctcgcgaggcgagagtatctactcgccatggcga 28350937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 55149275 - 55149308
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||||||||||||| |||||||||||||||||    
T  55149275 ctcgcgaggcgagagtatctactcgccatggcga 55149308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 137
Target Start/End: Complemental strand, 12171909 - 12171869
Alignment:
Q  97 tcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    |||||||||||||| |||||||||||||||| | |||||||    
T  12171909 tcgcgaggcgagagcctctactcgccatggccagttcaggt 12171869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 21837894 - 21837958
Alignment:
Q  174 tcaatcttaatctgaagtcttgcctaaccattactagacatcttcagacactcaaaagcatctaa 238  Q
    ||||||| ||||| ||  ||||||||| ||||| || |||| ||||||||||||||| |||||||    
T  21837894 tcaatctcaatctaaaaacttgcctaatcattattatacatattcagacactcaaaatcatctaa 21837958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 22110156 - 22110116
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcgaattcagg 136  Q
    ||||||||||||||| |||||||||| ||||||| ||||||    
T  22110156 ctcgcgaggcgagagcctctactcgctatggcgagttcagg 22110116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 23083167 - 23083135
Alignment:
Q  97 tcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||||||||||| ||||||||||||||||||    
T  23083167 tcgcgaggcgagagcctctactcgccatggcga 23083135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 133; Significance: 3e-69; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 18456934 - 18457174
Alignment:
Q  1 tatatataatattcataactatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcct-aacaaggcttctgtaattgggcaactcg 99  Q
    ||||||||||||||||||||  || ||||| ||||||| ||| | |||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||    
T  18456934 tatatataatattcataactgccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctgaacaaggcttctgtaattgggcaactcg 18457033  T
Q  100 cgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattcttaattaatccaggctcaatcttaatctgaagtcttgccta 199  Q
    ||||||||||| |||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||| ||||||| | |||  | |||| ||||    
T  18457034 cgaggcgagagcctctactcgccatggctagttcaggtcagcttccaaaaagttcattcttaattaatccaggttcaatctcattctacattctttccta 18457133  T
Q  200 accattactagacatcttcagacactcaaaagcatctaagg 240  Q
    | ||||| || |||| ||||| |||||||||||||||||||    
T  18457134 atcattattaaacatgttcaggcactcaaaagcatctaagg 18457174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 26 - 240
Target Start/End: Complemental strand, 19303418 - 19303202
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggct-tctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| ||||||||| ||| | |||||||| ||||||| |||||||||||||||  |||||   ||||  |||| ||||||||||| |||| |||||| |    
T  19303418 aaggttcaactcttagcaacttgtgcgacatagatcgcaaaatcctaacaaggcactctgtttctgggtcactctcgaggcgagagcctctgctcgccgt 19303319  T
Q  125 ggcgaattcaggtcagcttcgaaaaagtt-cattcttaattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagaca 223  Q
    ||||| |||||||||| ||   ||||||| |||||| |||   | |||| ||||||| | |||  | |||| ||||| ||||| ||||||| ||||| ||    
T  19303318 ggcgagttcaggtcagatttccaaaagtttcattctaaatcttttcaggttcaatctcattctacattctttcctaatcattattagacatgttcaggca 19303219  T
Q  224 ctcaaaagcatctaagg 240  Q
    |||||||||||||||||    
T  19303218 ctcaaaagcatctaagg 19303202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 23019709 - 23019871
Alignment:
Q  83 tgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggt-cagcttcgaaaaagttcattctt-aattaatccaggctcaatct 180  Q
    ||||||||| ||||||||||||| || | |||||||||||||||||| |||||||  | || | ||||| ||||||||| || || |||||| |||||||    
T  23019709 tgtaattggacaactcgcgaggcaagggcctctactcgccatggcgagttcaggtgtaactcccaaaaa-ttcattcttaaaatattccaggttcaatct 23019807  T
Q  181 taatctgaagtcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
     ||||| || |||| ||||| |||||  | |||| ||||| |||||||||||||||||||||||    
T  23019808 caatctaaaatctttcctaatcattatcacacatgttcaggcactcaaaagcatctaaggttca 23019871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 240
Target Start/End: Complemental strand, 28496280 - 28496134
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagtt-cattcttaattaatccaggctcaatcttaatctgaagtct 193  Q
    |||||||||||||||| |||| ||||||||||||| |||||||||| |||  ||||||| |||||| | |   |||||| ||||||| | |||  | |||    
T  28496280 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattctcaaaagtttcattctaagtctttccaggttcaatctcattctacattct 28496181  T
Q  194 tgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    |  |||| ||||| ||||||| ||||| |||||||||||||||||||    
T  28496180 tttctaatcattattagacatgttcaggcactcaaaagcatctaagg 28496134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 8523206 - 8523279
Alignment:
Q  57 agatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    ||||||| ||||||||| ||||||||||| ||| || |||||||||||||||||| ||||||||||||||||||    
T  8523206 agatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcga 8523279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 96 - 244
Target Start/End: Complemental strand, 22080543 - 22080394
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattcttaat-taatccaggctcaatcttaatctgaagtctt 194  Q
    ||||||||||||||| |||||||||||||||||| |||||||     ||  | |||||| |||||||  || |||||| |||||||||||||  | ||||    
T  22080543 ctcgcgaggcgagagcctctactcgccatggcgagttcaggtataactcccataagttcgttcttaaactattccaggttcaatcttaatctctaatctt 22080444  T
Q  195 gcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
      |||| ||||| ||||||| ||||| ||||||||| |||||||||||||    
T  22080443 ttctaatcattattagacatgttcagtcactcaaaaacatctaaggttca 22080394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 25644542 - 25644670
Alignment:
Q  2 atatataatattcataactatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgc 100  Q
    ||||||||| || ||||||| || ||||| ||||||| | ||| |||||||||| ||||||| ||| ||||| ||||  ||||| ||  |||||||||||    
T  25644542 atatataatctttataactaccccaaggttcaactctcagcaactcgtgcgacaaagatcgcaaaaacctaaacaagcattctgaaaccgggcaactcgc 25644641  T
Q  101 gaggcgagagtctctactcgccatggcga 129  Q
    |||||||| | |||||||||| |||||||    
T  25644642 gaggcgagggcctctactcgctatggcga 25644670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 244
Target Start/End: Complemental strand, 27333106 - 27332941
Alignment:
Q  80 ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggt-cagcttcgaaaaagttcattct-taattaatccaggctcaa 177  Q
    |||||||||||||||  |||||||||||||| |||||||||||||||||| ||||||| || | ||  |||| ||||||||  |||   |||||| ||||    
T  27333106 ttctgtaattgggcagttcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaac-tcacaaaacttcattctaaaatctttccaggttcaa 27333008  T
Q  178 tcttaatctgaagtcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
     || | ||| || |||| ||||| ||| | || |||| ||||| |||||||||||||||||||||||    
T  27333007 cctcattctaaaatctttcctaatcatcattatacatgttcagccactcaaaagcatctaaggttca 27332941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 80 - 244
Target Start/End: Complemental strand, 27393846 - 27393681
Alignment:
Q  80 ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggt-cagcttcgaaaaagttcattct-taattaatccaggctcaa 177  Q
    |||||||||||||||  |||||||||||||| |||||||||||||||||| ||||||| || | ||  |||| ||||||||  |||   |||||| ||||    
T  27393846 ttctgtaattgggcagttcgcgaggcgagagcctctactcgccatggcgagttcaggtgcaac-tcacaaaacttcattctaaaatctttccaggttcaa 27393748  T
Q  178 tcttaatctgaagtcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
     || | ||| || |||| ||||| ||| | || |||| ||||| |||||||||||||||||||||||    
T  27393747 cctcattctaaaatctttcctaatcatcattatacatgttcagccactcaaaagcatctaaggttca 27393681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 15685947 - 15685874
Alignment:
Q  57 agatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    ||||||| ||||||||| ||||||||| | ||| || |||||||||||||||||| ||||||||||||||||||    
T  15685947 agatcgcaaaatcctaaacaaggcttcggaaatgggacaactcgcgaggcgagaggctctactcgccatggcga 15685874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 18409712 - 18409488
Alignment:
Q  18 actatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggct-tctgtaattgggcaactcgcgaggcgagagtctcta 116  Q
    |||| |||||||| ||||||| || || |||||| ||| || |||  |||||||||||||||  |||||   ||||  ||| | |||||||||| ||||     
T  18409712 actaccctaaggttcaactctcaataactcgtgcaacaaaggtcgtaaaatcctaacaaggcactctgtttctgggtcactagagaggcgagagcctctg 18409613  T
Q  117 ctcgccatggcgaattcaggtcagcttcgaaaaagtt-cattcttaattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatc 215  Q
    |||||| |||||| ||||||||||  |  |||||||| |||||| |||   |||||| ||||||| | |||  | |||| ||||| ||||| |||||||     
T  18409612 ctcgccgtggcgagttcaggtcagaattcaaaaagtttcattctaaatctttccaggttcaatctcattctacattctttcctaatcattaatagacatg 18409513  T
Q  216 ttcagacactcaaaagcatctaagg 240  Q
    || || |||||||||||||||||||    
T  18409512 ttaaggcactcaaaagcatctaagg 18409488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 240
Target Start/End: Original strand, 29060784 - 29061000
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggct-tctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| || |||||| ||| |||||| ||| || |||| |||||||||||||||  |||||   ||||  |||||||||||||||| ||||||||| | |    
T  29060784 aaggttcagctcttagcaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctactcgtcgt 29060883  T
Q  125 ggcgaattcaggtcagcttcgaaaaagttcattct-taattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagaca 223  Q
    ||||| |||||||||| ||   |||||||||||||  |||   |||||| ||||||| |  ||  | || | ||||| ||||| | ||||| ||||| ||    
T  29060884 ggcgagttcaggtcagatttccaaaagttcattctacaatctttccaggttcaatctcatcctacattccttcctaatcattattggacatgttcaggca 29060983  T
Q  224 ctcaaaagcatctaagg 240  Q
    |||||||||||||||||    
T  29060984 ctcaaaagcatctaagg 29061000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 95 - 240
Target Start/End: Complemental strand, 29808691 - 29808544
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattct--taattaatccaggctcaatcttaatctgaagtc 192  Q
    |||||||||||||||| |||| ||||||||||||| |||||||||| |||  |||  ||||||||   |||   |||||| ||||||| | |||  | ||    
T  29808691 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattctacattc 29808592  T
Q  193 ttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    ||  |||| ||||| ||||||| ||||| |||||||||||||||||||    
T  29808591 ttttctaatcattattagacatgttcaggcactcaaaagcatctaagg 29808544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 20594017 - 20594132
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| |||| |||||||| | |||||||||||||||| |||||||||||||||  |||||   | ||  |||||||||||||||| |||| |||||| |    
T  20594017 aaggttcaacccttaacaacttgtgcgacacagatcgcaaaatcctaacaaggcactctgtttctaggtcactcgcgaggcgagagcctctgctcgccgt 20594116  T
Q  125 ggcgaattcaggtcag 140  Q
     |||| ||||||||||    
T  20594117 agcgagttcaggtcag 20594132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 4668035 - 4667978
Alignment:
Q  80 ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    |||||||| |||| | ||||||||||||||| |||||||||||||||||| |||||||    
T  4668035 ttctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggt 4667978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 19668672 - 19668728
Alignment:
Q  80 ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcagg 136  Q
    |||||||||||| || ||||||||||||||| |||||||||| ||||||| ||||||    
T  19668672 ttctgtaattggacagctcgcgaggcgagagcctctactcgctatggcgagttcagg 19668728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 1561714 - 1561767
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  1561714 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 1561767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 4185629 - 4185588
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    ||||||||||||||| |||||||||||||||||| |||||||    
T  4185629 ctcgcgaggcgagagcctctactcgccatggcgagttcaggt 4185588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 20638004 - 20637951
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  20638004 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 20637951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 18821626 - 18821582
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    ||||||||||||||| |||| ||||||||||||| ||||||||||    
T  18821626 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcag 18821582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 244
Target Start/End: Complemental strand, 16920348 - 16920301
Alignment:
Q  197 ctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  16920348 ctaatcattattagacatattcaggcactcaaaagcatctaaggttca 16920301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 137
Target Start/End: Original strand, 19652512 - 19652551
Alignment:
Q  98 cgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    ||||||||||||| |||||||||||||||||| |||||||    
T  19652512 cgcgaggcgagagcctctactcgccatggcgagttcaggt 19652551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 25928594 - 25928632
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcgaattca 134  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  25928594 ctcgcgaggcgagagtatctactcgccatggcgagttca 25928632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 137
Target Start/End: Complemental strand, 25956424 - 25956386
Alignment:
Q  99 gcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    |||||||||||| |||||||||||||||||||| |||||    
T  25956424 gcgaggcgagagcctctactcgccatggcgaatacaggt 25956386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 125
Target Start/End: Original strand, 4189255 - 4189300
Alignment:
Q  80 ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatg 125  Q
    |||||||| |||| | ||||||||||||||| ||||||||||||||    
T  4189255 ttctgtaaatgggtagctcgcgaggcgagagcctctactcgccatg 4189300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 125
Target Start/End: Complemental strand, 4674882 - 4674837
Alignment:
Q  80 ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatg 125  Q
    |||||||| |||| | ||||||||||||||| ||||||||||||||    
T  4674882 ttctgtaaatgggtagctcgcgaggcgagagcctctactcgccatg 4674837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 16920441 - 16920396
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||| ||||||||| |||| ||||||||||||| ||||||||||    
T  16920441 actcgcaaggcgagagcctctgctcgccatggcgagttcaggtcag 16920396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 17287506 - 17287457
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  17287506 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 17287457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 20360768 - 20360723
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||||||||||||| |||  ||||||||||||| ||||||||||    
T  20360768 actcgcgaggcgagagcctcagctcgccatggcgagttcaggtcag 20360723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 22779937 - 22779888
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  22779937 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 22779888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 15894237 - 15894193
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    ||||||||| ||||| |||| ||||||||||||| ||||||||||    
T  15894237 ctcgcgaggtgagagactctgctcgccatggcgagttcaggtcag 15894193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 18821535 - 18821487
Alignment:
Q  196 cctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    ||||| ||||| || |||| ||||| |||||||||||||||||||||||    
T  18821535 cctaatcattattaaacatgttcaggcactcaaaagcatctaaggttca 18821487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 244
Target Start/End: Original strand, 22831919 - 22831955
Alignment:
Q  208 tagacatcttcagacactcaaaagcatctaaggttca 244  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  22831919 tagacatgttcaaacactcaaaagcatctaaggttca 22831955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 25611428 - 25611380
Alignment:
Q  196 cctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    ||||| ||||| ||||||| ||||| |||||||| ||||||||||||||    
T  25611428 cctaatcattattagacatgttcaggcactcaaaggcatctaaggttca 25611380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 25611530 - 25611486
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    ||||||||||||||| |||| ||| ||||||||| ||||||||||    
T  25611530 ctcgcgaggcgagagcctctgctctccatggcgagttcaggtcag 25611486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 12148 - 12388
Alignment:
Q  1 tatatataatattcataactatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggcttctgtaattgggcaactcg 99  Q
    |||||| |||||||||||||| || ||||| ||||||| ||| | ||||| |||| ||||||| ||||||||| || |||||||||||||||||||||||    
T  12148 tatatacaatattcataactaccccaaggttcaactctcaacgactcgtgtgacaaagatcgcaaaatcctaaacagggcttctgtaattgggcaactcg 12247  T
Q  100 cgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattcttaattaatccaggctcaatcttaatctgaagtcttgccta 199  Q
    ||||| ||||| |||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||| ||||||| | |||  | |||| ||||    
T  12248 cgaggtgagagcctctactcgccatggcgagttcaggtcagtttccaaaaagttcattcttaattaatccaggttcaatctcattctacattctttccta 12347  T
Q  200 accattactagacatcttcagacactcaaaagcatctaagg 240  Q
    | ||||| || |||| |||||||||||||||||||||||||    
T  12348 atcattattaaacatattcagacactcaaaagcatctaagg 12388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 125; Significance: 2e-64; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 12756618 - 12756378
Alignment:
Q  1 tatatataatattcataactatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggcttctgtaattgggcaactcg 99  Q
    |||||| |||||||||||||| || ||||| ||||||| ||| | |||||||||| ||||||| ||||||||| |||||||| |||||||||||||||||    
T  12756618 tatatacaatattcataactaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaaggcttttgtaattgggcaactcg 12756519  T
Q  100 cgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattcttaattaatccaggctcaatcttaatctgaagtcttgccta 199  Q
    ||||||||||| ||||||||||||||| || |||||||||||||| ||||||||||||||||| ||||||||| ||||||| | |||  | |||| ||||    
T  12756518 cgaggcgagagcctctactcgccatggtgagttcaggtcagcttccaaaaagttcattcttaaataatccaggttcaatctcattctacattctttccta 12756419  T
Q  200 accattactagacatcttcagacactcaaaagcatctaagg 240  Q
    | ||||| || |||| ||||| |||||||||||||||||||    
T  12756418 atcattattaaacatgttcaggcactcaaaagcatctaagg 12756378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 17061862 - 17061621
Alignment:
Q  1 tatatataatattcataactatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggcttctgtaattgggcaactcg 99  Q
    ||||| ||||||||||||||| || | ||| ||||||| ||| | |||||||||| ||||||| ||||||||| ||||  |||||||| | ||  |||||    
T  17061862 tatatgtaatattcataactaccccatggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattctgtaaataggtcactcg 17061763  T
Q  100 cgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattct-taattaatccaggctcaatcttaatctgaagtcttgcct 198  Q
    ||||||||||| ||||||||||||| |||| |||||||||| |||  |||  || |||||  |||  ||||||| ||||||| | |||  | |||| |||    
T  17061762 cgaggcgagagcctctactcgccatcgcgagttcaggtcagattctcaaagttttattctaaaatctatccaggttcaatctcattctacattctttcct 17061663  T
Q  199 aaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    || ||||| || |||| ||||| |||||||||||||||||||    
T  17061662 aatcattattaaacatgttcaggcactcaaaagcatctaagg 17061621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 240
Target Start/End: Original strand, 38227724 - 38227940
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggct-tctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| ||||||||||||| |||||| ||| || |||| ||| |||||||||||  |||||   ||||  |||||||||||||||| |||| |||||| |    
T  38227724 aaggttcaactcttaacaactcgtgcaacaaaggtcgcaaaaacctaacaaggcactctgtttatgggtcactcgcgaggcgagagcctctgctcgccgt 38227823  T
Q  125 ggcgaattcaggtcagcttcgaaaaag-ttcattcttaattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagaca 223  Q
    ||||| ||||||||||  || |||||| |||||||| |||   |||||| ||||||| | |||  | |||| ||||| ||||| ||||||| ||||| ||    
T  38227824 ggcgagttcaggtcagaatccaaaaagtttcattctaaatctttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggca 38227923  T
Q  224 ctcaaaagcatctaagg 240  Q
    |||||||||||||||||    
T  38227924 ctcaaaagcatctaagg 38227940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 238
Target Start/End: Complemental strand, 12255662 - 12255454
Alignment:
Q  32 caactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaa 130  Q
    ||||||| ||||| ||||| |||| ||||||| ||||||||| ||||  |||||||| |||| ||||||||||||||||| |||||||||| |||||||     
T  12255662 caactctcaacaactcgtgtgacaaagatcgcaaaatcctaaacaagcattctgtaactgggaaactcgcgaggcgagagcctctactcgctatggcgag 12255563  T
Q  131 ttcaggt-cagcttcgaaaaagttcattctt-aattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagacactcaa 228  Q
    |||||||  | || | ||||| ||||||||| || || |||||| ||||||| |||||  | |||| ||||| ||||| || |||| ||||  |||||||    
T  12255562 ttcaggtgtaactcccaaaaa-ttcattcttaaactattccaggttcaatctcaatctagaatctttcctaatcattattatacatgttcaagcactcaa 12255464  T
Q  229 aagcatctaa 238  Q
    || |||||||    
T  12255463 aatcatctaa 12255454  T

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Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 241
Target Start/End: Complemental strand, 15143913 - 15143697
Alignment:
Q  27 aggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggct-tctgtaattgggcaactcgcgaggcgagagtctctactcgccatg 125  Q
    |||| ||||||||| ||| |||||| ||| || |||| |||||||||||||||  |||||   | ||  |||||||||||||||| |||| |||||||||    
T  15143913 aggttcaactcttagcaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctaggtcactcgcgaggcgagagcctctgctcgccatg 15143814  T
Q  126 gcgaattcaggtcagcttcgaaaaagttcattct-taattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagacac 224  Q
    |||| | ||||||||  ||  |||||||||||||  |||   |||||| ||||||| | ||| || |||| ||||| ||||| ||||||| ||||| |||    
T  15143813 gcgagtacaggtcagaatcacaaaagttcattctaaaatctttccaggttcaatctcattctaaaatctttcctaatcattattagacatgttcaggcac 15143714  T
Q  225 tcaaaagcatctaaggt 241  Q
    ||||| |||||||||||    
T  15143713 tcaaaggcatctaaggt 15143697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 44116724 - 44116964
Alignment:
Q  1 tatatataatattcataactatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggcttctgtaattgggcaactcg 99  Q
    |||||||| |||||||||||| || ||||| |||| || ||| | |||||| | | ||||||| ||||||||| | ||  |||||||| || |  |||||    
T  44116724 tatatatattattcataactaccccaaggttcaaccctcaacgactcgtgcaataaagatcgcaaaatcctaaactagcgttctgtaactgagtcactcg 44116823  T
Q  100 cgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattcttaattaatccaggctcaatcttaatctgaagtcttgccta 199  Q
    ||||||||||| |||| ||||||||||||| |||||||||| |||  |||  |||||||| |||   ||| || ||||||| | |||  | |||| ||||    
T  44116824 cgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaatctttccgggttcaatctcattctacattctttccta 44116923  T
Q  200 accattactagacatcttcagacactcaaaagcatctaagg 240  Q
    | ||||| ||||||| |||||  ||||||| |||| |||||    
T  44116924 atcattattagacatgttcagggactcaaaggcatataagg 44116964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 244
Target Start/End: Complemental strand, 16219550 - 16219373
Alignment:
Q  69 cctaacaaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggt-cagcttcgaaaaagttcattctt-aatta 165  Q
    ||||||||||| |||||||| | | |||||||||||||||| | |||||||||||||||||| |||| ||  | || | ||||| ||||||||| || ||    
T  16219550 cctaacaaggcattctgtaactagacaactcgcgaggcgagggcctctactcgccatggcgagttcacgtgtaactcccaaaaa-ttcattcttaaacta 16219452  T
Q  166 atccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
     |||||| ||||||| ||||| || |||| ||||| ||||| || |||  || |||||||||||| |||||||||||||    
T  16219451 ttccaggttcaatctcaatctaaaatctttcctaatcattattatacaagtttagacactcaaaaacatctaaggttca 16219373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 16006692 - 16006765
Alignment:
Q  57 agatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    ||||||| ||||||||| ||||||||||| ||| || |||||||||||||||||| ||||||||||||||||||    
T  16006692 agatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcga 16006765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 2279995 - 2279883
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| ||||||| ||||| ||||| |||| ||||||| ||||||||| ||||  |||| ||| | |||||||||||||||||| | |||||||||| ||    
T  2279995 aaggttcaactctcaacaactcgtgtgacaaagatcgcaaaatcctaaacaagcattctataactaggcaactcgcgaggcgagggcctctactcgctat 2279896  T
Q  125 ggcgaattcaggt 137  Q
    ||||| |||||||    
T  2279895 ggcgagttcaggt 2279883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 129
Target Start/End: Complemental strand, 21743131 - 21743059
Alignment:
Q  58 gatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||| ||||||||| ||||||||||| ||| || |||||||||||||||||| ||||||||||||||||||    
T  21743131 gatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcga 21743059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 95 - 240
Target Start/End: Complemental strand, 810936 - 810790
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggt-cagcttcgaaaaagttcattcttaatt-aatccaggctcaatcttaatctgaagtc 192  Q
    |||||||||||||||| |||||||||||||||||| ||||||| ||| |||  |||| |||||||| ||||   |||||| ||||||||| |||  | ||    
T  810936 actcgcgaggcgagagcctctactcgccatggcgagttcaggtacag-ttcacaaaaattcattctaaattctttccaggttcaatcttattctccaatc 810838  T
Q  193 ttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    || ||||| ||||| |||| || ||||| ||||||||| |||||||||    
T  810837 tttcctaatcattattagatatgttcaggcactcaaaaacatctaagg 810790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 16056615 - 16056684
Alignment:
Q  69 cctaacaaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    ||||||||||| |||||||| |||| ||||||||||||||||| |||||||||| ||||||| |||||||    
T  16056615 cctaacaaggcattctgtaactgggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggt 16056684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 239
Target Start/End: Complemental strand, 3564234 - 3564026
Alignment:
Q  33 aactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggct-tctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaat 131  Q
    |||||||||||| |||||| ||| || |||| |||||||||||||||  |||||   ||||  ||||||||||||||||  | | |||||  |||||| |    
T  3564234 aactcttaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcatttgctcgctgtggcgagt 3564135  T
Q  132 tcaggtcagcttcgaaaaagttcattctt-aattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagacactcaaaa 230  Q
    ||||||||| ||   |||||||||||||  |||   |||||| ||||||| |  ||  | |||| ||||| ||||| ||||||| ||||| |||||||||    
T  3564134 tcaggtcagatttccaaaagttcattctacaatctttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggcactcaaaa 3564035  T
Q  231 gcatctaag 239  Q
    |||||||||    
T  3564034 gcatctaag 3564026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 8776634 - 8776707
Alignment:
Q  57 agatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    ||||||| ||||||||| |||||||| || ||| || |||||||||||||||||| |||||||| |||||||||    
T  8776634 agatcgcaaaatcctaaacaaggcttatgaaatgggacaactcgcgaggcgagaggctctactcaccatggcga 8776707  T

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Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 22073215 - 22073272
Alignment:
Q  80 ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    |||||||| |||| ||||||||||||||| | |||||||||||||||||| |||||||    
T  22073215 ttctgtaactgggtaactcgcgaggcgagggcctctactcgccatggcgagttcaggt 22073272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 244
Target Start/End: Original strand, 47832108 - 47832272
Alignment:
Q  80 ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattcttaat-taatccaggctcaat 178  Q
    |||||||| ||||||  |||||||||||| | |||||||||||||||||| |||| ||     ||  |||| ||| |||||||  || |||||  |||||    
T  47832108 ttctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcatgtgtaactctcaaaa-ttcgttcttaaactattccagattcaat 47832206  T
Q  179 cttaatctgaagtcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    ||||||||  | |||| ||||| ||||| ||||||| ||||| ||||||||| |||||||||||||    
T  47832207 cttaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttca 47832272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 136
Target Start/End: Complemental strand, 15008375 - 15008263
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgcca 123  Q
    ||||| |||||| |||||  |||||||||| ||||||| ||| ||||| |||||  ||||  || |||||||||||||||||||||| |||||||||| |    
T  15008375 aaggttcaactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaaggtattctacaactgggcaactcgcgaggcgagagcctctactcgcta 15008276  T
Q  124 tggcgaattcagg 136  Q
    ||| || ||||||    
T  15008275 tggtgagttcagg 15008263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 34201205 - 34201247
Alignment:
Q  202 cattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    ||||| ||||||| |||||||||||||||||||||||||||||    
T  34201205 cattattagacatgttcagacactcaaaagcatctaaggttca 34201247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 15754597 - 15754544
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  15754597 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 15754544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 16385968 - 16385915
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  16385968 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 16385915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 26212309 - 26212354
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||||||||||||| ||||||||||| |||||| ||||||||||    
T  26212309 actcgcgaggcgagagcctctactcgccgtggcgagttcaggtcag 26212354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 40443788 - 40443841
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  40443788 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 40443841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 11995771 - 11995715
Alignment:
Q  188 aagtcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    ||||||| ||||| ||||| ||||||| ||||| ||||||||| |||||||||||||    
T  11995771 aagtctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttca 11995715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 134
Target Start/End: Original strand, 68036 - 68099
Alignment:
Q  72 aacaaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattca 134  Q
    |||||||| |||||||| |||  | ||||||||||||||| |||||||||||||||||| ||||    
T  68036 aacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcgagttca 68099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 135
Target Start/End: Complemental strand, 9389501 - 9389462
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcgaattcag 135  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  9389501 ctcgcgaggcgagagcctctactcgccatggcgagttcag 9389462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 240
Target Start/End: Original strand, 9509502 - 9509649
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaag-ttcattct-taattaatccaggctcaatcttaatctgaagtc 192  Q
    |||||||||||||||| |||| |||||| |||||| ||||||||||  ||  | ||| ||||||||  |||   |||||| ||||||| |  ||  | ||    
T  9509502 actcgcgaggcgagagcctctcctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattc 9509601  T
Q  193 ttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    || ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  9509602 tttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 9509649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 14036448 - 14036554
Alignment:
Q  32 caactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||| |||||  |||||||||| ||||||| ||| ||||| |||||  ||||| |||||| || |||||||||||||   |||||||||| |||||||    
T  14036448 caactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaaggtattctgaaattggccagctcgcgaggcgagccactctactcgctatggcga 14036547  T
Q  130 attcagg 136  Q
     ||||||    
T  14036548 gttcagg 14036554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 136
Target Start/End: Original strand, 14346478 - 14346584
Alignment:
Q  32 caactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||| |||||  |||||||||| ||||||| ||| ||||| |||||  ||||| |||||| || |||||||||||||   |||||||||| |||||||    
T  14346478 caactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaaggtattctgaaattggccagctcgcgaggcgagccactctactcgctatggcga 14346577  T
Q  130 attcagg 136  Q
     ||||||    
T  14346578 gttcagg 14346584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 244
Target Start/End: Complemental strand, 2529703 - 2529634
Alignment:
Q  175 caatcttaatctgaagtcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||||| ||||| ||  ||||||||| ||||| || |||| ||||| ||||||||| |||||||||||||    
T  2529703 caatctcaatctaaaaacttgcctaatcattattatacatattcaggcactcaaaatcatctaaggttca 2529634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 11262625 - 11262658
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||||||||||||| |||||||||||||||||    
T  11262625 ctcgcgaggcgagagtatctactcgccatggcga 11262658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 11548076 - 11548043
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||||||||||||| |||||||||||||||||    
T  11548076 ctcgcgaggcgagagtatctactcgccatggcga 11548043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 11554672 - 11554639
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||||||||||||| |||||||||||||||||    
T  11554672 ctcgcgaggcgagagtatctactcgccatggcga 11554639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 12692792 - 12692825
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||||||||||||| |||||||||||||||||    
T  12692792 ctcgcgaggcgagagtatctactcgccatggcga 12692825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 12699243 - 12699292
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  12699243 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 12699292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 14953494 - 14953527
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||||||||||||| |||||||||||||||||    
T  14953494 ctcgcgaggcgagagtatctactcgccatggcga 14953527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 14959460 - 14959493
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||||||||||||| |||||||||||||||||    
T  14959460 ctcgcgaggcgagagtatctactcgccatggcga 14959493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 16324293 - 16324354
Alignment:
Q  69 cctaacaaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    ||||||||||| |||||||| ||||||  |||| ||||||| | ||||||||||||||||||    
T  16324293 cctaacaaggcattctgtaactgggcagttcgcaaggcgagggcctctactcgccatggcga 16324354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 27847554 - 27847501
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||| | ||||||| ||||| |||||||||||||||||||||||    
T  27847554 tctttcctaatcataattagacatgttcaggcactcaaaagcatctaaggttca 27847501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 28505011 - 28504958
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| ||||||||| |||||||||||||    
T  28505011 tctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttca 28504958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 40443702 - 40443747
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||||||||||||| |||| |||||| |||||| ||||||||||    
T  40443702 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcag 40443747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 44014489 - 44014530
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    ||||||||||||||| |||||||| ||||||||| |||||||    
T  44014489 ctcgcgaggcgagagcctctactcaccatggcgagttcaggt 44014530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 134
Target Start/End: Original strand, 14044998 - 14045102
Alignment:
Q  32 caactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||| |||||  |||||||||| ||||||| ||| ||||| |||||  ||||| || |||||| |||||||||||||   |||||||||| |||||||    
T  14044998 caactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaaggtattctgaaactgggcagctcgcgaggcgagccactctactcgctatggcga 14045097  T
Q  130 attca 134  Q
     ||||    
T  14045098 gttca 14045102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 134
Target Start/End: Original strand, 14355028 - 14355132
Alignment:
Q  32 caactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||| |||||  |||||||||| ||||||| ||| ||||| |||||  ||||| || |||||| |||||||||||||   |||||||||| |||||||    
T  14355028 caactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaaggtattctgaaactgggcagctcgcgaggcgagccactctactcgctatggcga 14355127  T
Q  130 attca 134  Q
     ||||    
T  14355128 gttca 14355132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 20327 - 20087
Alignment:
Q  1 tatatataatattcataactatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggcttctgtaattgggcaactcg 99  Q
    |||||| ||||||||||||||||| ||||| ||||||| ||| | |||||||||| ||| ||| ||||||||| |||||||||||||||| ||||||| |    
T  20327 tatatacaatattcataactatcccaaggttcaactctcaacgactcgtgcgacaaagaccgcaaaatcctaaacaaggcttctgtaattaggcaacttg 20228  T
Q  100 cgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattcttaattaatccaggctcaatcttaatctgaagtcttgccta 199  Q
    ||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||| | |||  | |||| ||||    
T  20227 cgaggcgagagcctctactcgccatggcgagttcaggtcagcttccaaaaagttcattcttaattaatccaggttcaatctcattctacattctttccta 20128  T
Q  200 accattactagacatcttcagacactcaaaagcatctaagg 240  Q
      ||||| || |||| |||||  ||||||||||||||||||    
T  20127 ctcattattaaacatgttcaggaactcaaaagcatctaagg 20087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 117; Significance: 1e-59; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 21815532 - 21815293
Alignment:
Q  1 tatatataatattcataactatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggcttctgtaattgggcaactcg 99  Q
    |||||| | |||||||||||| || ||||| ||||||| ||| | ||||||||   ||||||| ||||||||| ||||||||||||||||||||||||||    
T  21815532 tatatacagtattcataactaccc-aaggttcaactctcaacgactcgtgcgatgaagatcgcaaaatcctaaacaaggcttctgtaattgggcaactcg 21815434  T
Q  100 cgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattcttaattaatccaggctcaatcttaatctgaagtcttgccta 199  Q
    ||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||| | | | ||| || | || ||||    
T  21815433 cgaggcgagagcctctactcgccatggcgagttcaggtcagcttccaaaaagttcattcttaattaatccaggttcattatcattctaaattatttccta 21815334  T
Q  200 accattactagacatcttcagacactcaaaagcatctaagg 240  Q
    | ||||| || |||| |||||||||||||||||||||||||    
T  21815333 atcattattaaacatgttcagacactcaaaagcatctaagg 21815293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 32 - 240
Target Start/End: Complemental strand, 21815173 - 21814964
Alignment:
Q  32 caactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaa 130  Q
    ||||||| ||| | ||||||||   ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  21815173 caactctcaacgactcgtgcgatgaagatcgcaaaatcctaaacaaggcttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgag 21815074  T
Q  131 ttcaggtcagcttcgaaaaagttcattcttaattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagacactcaaaa 230  Q
    |||| ||||||||| ||||||||||||||||||||||||||| ||| | | | ||| || |||| ||||| ||||| || |||| |||||||||||||||    
T  21815073 ttcaagtcagcttccaaaaagttcattcttaattaatccaggttcattatcattctaaattctttcctaatcattattaaacatgttcagacactcaaaa 21814974  T
Q  231 gcatctaagg 240  Q
    ||||||||||    
T  21814973 gcatctaagg 21814964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 32 - 240
Target Start/End: Complemental strand, 21818595 - 21818386
Alignment:
Q  32 caactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaa 130  Q
    ||||||| ||| | ||||||||   ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  21818595 caactctcaacgactcgtgcgatgaagatcgcaaaatcctaaacaaggcttctgtaattgggcaactcgcgaggcgagagcctctactcgccatggcgag 21818496  T
Q  131 ttcaggtcagcttcgaaaaagttcattcttaattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagacactcaaaa 230  Q
    |||| ||||||||| ||||||||||||||||||||||||||| ||| | | | ||| || |||| ||||| ||||| || |||| |||||||||||||||    
T  21818495 ttcaagtcagcttccaaaaagttcattcttaattaatccaggttcattatcattctaaattctttcctaatcattattaaacatgttcagacactcaaaa 21818396  T
Q  231 gcatctaagg 240  Q
    ||||||||||    
T  21818395 gcatctaagg 21818386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 44102429 - 44102569
Alignment:
Q  1 tatatataatattcataactatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcct-aacaaggcttctgtaattgggcaactcg 99  Q
    |||||||||||||||||||||||| ||||| ||||||| ||| | |||||| ||| ||||||| ||||||| ||||||  |||||||| | ||  |||||    
T  44102429 tatatataatattcataactatcccaaggttcaactctcaacgactcgtgctacaaagatcgcaaaatcctaaacaagtattctgtaaataggtcactcg 44102528  T
Q  100 cgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    ||||||||||| |||| ||||||||||||| ||||||||||    
T  44102529 cgaggcgagagcctctgctcgccatggcgagttcaggtcag 44102569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 44928825 - 44928584
Alignment:
Q  1 tatatataatattcataactatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcct-aacaaggcttctgtaattgggcaactcg 99  Q
    ||||||||||||||||||||| |  ||||| ||||||| ||| | |||||||||| ||||||| ||||||| ||||||  |||||||| ||||  |||||    
T  44928825 tatatataatattcataactaccacaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattctgtaactgggtcactcg 44928726  T
Q  100 cgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattct-taattaatccaggctcaatcttaatctgaagtcttgcct 198  Q
    ||||||||||| |||| ||||||||||||| ||| |||||| |||  |||  ||||||||  |||   |||||| ||||||| | |||  | |||| |||    
T  44928725 cgaggcgagagcctctgctcgccatggcgagttctggtcagattcccaaagtttcattctaaaatctttccaggttcaatctcattctacattctttcct 44928626  T
Q  199 aaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    || ||||| |||| || ||||| ||||||||| ||| |||||    
T  44928625 aatcattattagatatgttcaggcactcaaaaacatataagg 44928584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 137
Target Start/End: Complemental strand, 52243093 - 52242958
Alignment:
Q  3 tatataatattcataactatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcg 101  Q
    |||| ||| ||||| |||| || || || |||||||| || | |||||||||| ||||||| ||||||||| ||||  |||||||| |||||||||||||    
T  52243093 tatacaatcttcattactaccccaaagttcaactctttacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattctgtaactgggcaactcgcg 52242994  T
Q  102 aggcgagagtctctactcgccatggcgaattcaggt 137  Q
    ||||||||| |||||||||| ||||||| |||||||    
T  52242993 aggcgagagcctctactcgctatggcgagttcaggt 52242958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 26 - 238
Target Start/End: Original strand, 15091140 - 15091355
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| |||||||||  || | |||||||||||||||| |||||||||||||||  |||||   ||||  |||||||||||||||| |||| |||||| |    
T  15091140 aaggttcaactcttagaaacttgtgcgacacagatcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgt 15091239  T
Q  125 ggcgaattcaggtcag-cttcgaaaaagttcattct-taattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagac 222  Q
    ||||| ||||||||||  ||| ||||  ||||||||  |||   |||||| ||||||| | |||  | |||| ||||| || || ||||||| ||||||     
T  15091240 ggcgagttcaggtcagatttccaaaagtttcattctaaaatccttccaggttcaatctcattctacattctttcctaatcaatattagacatgttcagaa 15091339  T
Q  223 actcaaaagcatctaa 238  Q
    ||||||||||||||||    
T  15091340 actcaaaagcatctaa 15091355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 240
Target Start/End: Original strand, 14038892 - 14039109
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| ||||||||| ||| | |||||||||||||||| |||||||||||||||  |||||   ||||  |||||||||||||||| |||| |||||| |    
T  14038892 aaggttcaactcttagcaacttgtgcgacacagatcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgt 14038991  T
Q  125 ggcgaattcaggtcag-cttcgaaaaagttcattct-taattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagac 222  Q
    ||||| ||| ||||||  ||| ||||  ||||||||  |||   || ||| ||||||| | |||  | |||| || || ||||| ||||||| ||||| |    
T  14038992 ggcgagttctggtcagatttccaaaagtttcattctaaaatctttctaggttcaatctcattctacattctttccaaatcattattagacatgttcaggc 14039091  T
Q  223 actcaaaagcatctaagg 240  Q
    ||||||||||||||||||    
T  14039092 actcaaaagcatctaagg 14039109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 15464807 - 15464694
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgcca 123  Q
    ||||| |||||| |||||| | |||||||| |||| || ||||||||| |||| | |||||||| |||||||||||||||||||||| |||||||||| |    
T  15464807 aaggttcaactcataacaacttgtgcgacaaagattgcaaaatcctaaacaagtcattctgtaactgggcaactcgcgaggcgagagcctctactcgcta 15464708  T
Q  124 tggcgaattcaggt 137  Q
    ||| || |||||||    
T  15464707 tggtgagttcaggt 15464694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 80 - 244
Target Start/End: Complemental strand, 39706109 - 39705945
Alignment:
Q  80 ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattcttaat-taatccaggctcaat 178  Q
    |||||||| ||||||  |||||||||||| | |||||||||||||||||| |||||||     ||  |||| ||| |||||||  || |||||| |||||    
T  39706109 ttctgtaactgggcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaa-ttcgttcttaaactattccaggttcaat 39706011  T
Q  179 cttaatctgaagtcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    ||||||||  | |||| ||||| ||||| ||||||| ||||| ||||||||| |||||||||||||    
T  39706010 cttaatcttcaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttca 39705945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 129
Target Start/End: Original strand, 4171299 - 4171371
Alignment:
Q  58 gatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||| ||||||||| ||||||||||| ||| || |||||||||||||||||| ||||||||||||||||||    
T  4171299 gatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcga 4171371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 129
Target Start/End: Original strand, 14698991 - 14699063
Alignment:
Q  58 gatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||| ||||||||| ||||||||||| ||| || |||||||||||||||||| ||||||||||||||||||    
T  14698991 gatcgccaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcga 14699063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 41791946 - 41792019
Alignment:
Q  57 agatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    ||||||| ||||||||| ||||||||||| ||| || ||| |||||||||||||| ||||||||||||||||||    
T  41791946 agatcgcaaaatcctaaacaaggcttctgaaatgggacaaatcgcgaggcgagaggctctactcgccatggcga 41792019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 240
Target Start/End: Complemental strand, 16377329 - 16377183
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattct-taattaatccaggctcaatcttaatctgaagtct 193  Q
    ||||| |||||||||| |||| |||||| |||||| |||||||||| |||  |||||||||||||   || | |||||| ||||||| |  ||  | | |    
T  16377329 actcgtgaggcgagagcctctgctcgccgtggcgagttcaggtcagattcccaaaagttcattctacgatcattccaggttcaatctcatcctacattat 16377230  T
Q  194 tgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    | ||||| ||||| ||||||| ||||||| |||||||||||||||||    
T  16377229 ttcctaatcattattagacatgttcagacgctcaaaagcatctaagg 16377183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 22636845 - 22636894
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    |||| ||||| ||||| |||||||||||||||||||||||||||||||||    
T  22636845 tctttcctaatcattattagacatcttcagacactcaaaagcatctaagg 22636894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 140
Target Start/End: Original strand, 44053066 - 44053187
Alignment:
Q  19 ctatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggct-tctgtaattgggcaactcgcgaggcgagagtctctac 117  Q
    |||||| ||||| |||||||  |||| |||||| ||| || |||| ||||| |||||||||  |||||   ||||  ||||||||||||||||||||| |    
T  44053066 ctatcccaaggttcaactctcgacaactcgtgcaacaaaggtcgcaaaatc-taacaaggcactctgtttctgggtcactcgcgaggcgagagtctctgc 44053164  T
Q  118 tcgccatggcgaattcaggtcag 140  Q
    ||||| |||||| ||||||||||    
T  44053165 tcgccgtggcgagttcaggtcag 44053187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 7089190 - 7089235
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||||    
T  7089190 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcag 7089235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 14053023 - 14052970
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  14053023 tctttcctaatcattattagacatattcaggcactcaaaagcatctaaggttca 14052970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 15099665 - 15099706
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    ||||||||||||||| |||||||||||||||||| |||||||    
T  15099665 ctcgcgaggcgagagcctctactcgccatggcgagttcaggt 15099706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 16597056 - 16597109
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  16597056 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 16597109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 17047880 - 17047835
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||||    
T  17047880 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcag 17047835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 137
Target Start/End: Original strand, 12774313 - 12774355
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    |||||||||||||||| |||| ||||||||||||| |||||||    
T  12774313 actcgcgaggcgagagcctctgctcgccatggcgagttcaggt 12774355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 244
Target Start/End: Original strand, 13844854 - 13845003
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcgaattcaggtc-agcttcgaaaaagttcattcttaat-taatccaggctcaatcttaatctgaagtct 193  Q
    ||||||||||||||| |||||||||||||||| | | |||||  | || | ||||| | |||||||||  || |||||| | |||||| ||||  | |||    
T  13844854 ctcgcgaggcgagagcctctactcgccatggcaagtacaggtgtaactcccaaaaa-tccattcttaaactattccaggttaaatcttgatctagaatct 13844952  T
Q  194 tgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |  |||| ||| | ||||||| ||||||||||||||| |||||||||||||    
T  13844953 tttctaatcataattagacatgttcagacactcaaaaacatctaaggttca 13845003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 72 - 129
Target Start/End: Original strand, 15190607 - 15190665
Alignment:
Q  72 aacaaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||||| |||||||| |||  | ||||||||||||||| ||||||||||||||||||    
T  15190607 aacaaggcattctgtaactggttagctcgcgaggcgagagcctctactcgccatggcga 15190665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 240
Target Start/End: Original strand, 44053251 - 44053289
Alignment:
Q  202 cattactagacatcttcagacactcaaaagcatctaagg 240  Q
    ||||| ||||||| |||||||||||||||||||||||||    
T  44053251 cattattagacatgttcagacactcaaaagcatctaagg 44053289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 3096956 - 3097001
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||||||||||||| |||| |||||| |||||| ||||||||||    
T  3096956 actcgcgaggcgagagcctctgctcgccttggcgagttcaggtcag 3097001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 7799010 - 7799055
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||||||||||||| |||| |||||| |||||| ||||||||||    
T  7799010 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcag 7799055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 8846689 - 8846722
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcga 129  Q
    ||||||||||||||| ||||||||||||||||||    
T  8846689 ctcgcgaggcgagagcctctactcgccatggcga 8846722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 12903070 - 12903115
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||||||||| ||| ||||||||||| |||||| ||||||||||    
T  12903070 actcgcgaggcgggagcctctactcgccgtggcgagttcaggtcag 12903115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 14679259 - 14679292
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||||||||||||| |||||||||||||||||    
T  14679259 ctcgcgaggcgagagtatctactcgccatggcga 14679292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 14685468 - 14685501
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||||||||||||| |||||||||||||||||    
T  14685468 ctcgcgaggcgagagtatctactcgccatggcga 14685501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 15552224 - 15552277
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| ||||||||||||| |||||||||    
T  15552224 tctttcctaatcattattagacatgttcaggcactcaaaagcatataaggttca 15552277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 16239702 - 16239653
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  16239702 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 16239653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 23838730 - 23838763
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||||||||||||| |||||||||||||||||    
T  23838730 ctcgcgaggcgagagtatctactcgccatggcga 23838763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 35614236 - 35614269
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||||||||||||| |||||||||||||||||    
T  35614236 ctcgcgaggcgagagtatctactcgccatggcga 35614269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 41385554 - 41385521
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||||||||||||| |||||||||||||||||    
T  41385554 ctcgcgaggcgagagtatctactcgccatggcga 41385521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 244
Target Start/End: Complemental strand, 13812502 - 13812466
Alignment:
Q  208 tagacatcttcagacactcaaaagcatctaaggttca 244  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  13812502 tagacatgttcagacactcaaaggcatctaaggttca 13812466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 244
Target Start/End: Complemental strand, 15868368 - 15868292
Alignment:
Q  168 ccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    ||||| ||||||| ||||| ||  ||| ||||| ||||| || |||| ||||| ||||||||| |||||||||||||    
T  15868368 ccaggttcaatctcaatctaaaaactttcctaatcattattatacatattcaggcactcaaaatcatctaaggttca 15868292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 242
Target Start/End: Complemental strand, 43198315 - 43198247
Alignment:
Q  174 tcaatcttaatctgaagtcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggtt 242  Q
    ||||||| ||||| || |||| ||||| ||||| || |||| ||||| ||||||||| |||||||||||    
T  43198315 tcaatctcaatctaaaatctttcctaatcattattacacatgttcaggcactcaaaaacatctaaggtt 43198247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 36154730 - 36154489
Alignment:
Q  1 tatatataatattcataactatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcct-aacaaggcttctgtaattgggcaactcg 99  Q
    ||||||||||||||||||||| || ||||| ||||||| ||| | |||||||||| ||||||| ||||||| ||||||  |||||||| | ||  |||||    
T  36154730 tatatataatattcataactaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattctgtaaataggtcactcg 36154631  T
Q  100 cgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattct-taattaatccaggctcaatcttaatctgaagtcttgcct 198  Q
    ||||||||||| |||||||||||||||||| |||||||||| |||  |||  || |||||  |||  ||||||| ||||||| | |||  | |||| |||    
T  36154630 cgaggcgagagcctctactcgccatggcgagttcaggtcagattctcaaagttttattctaaaatctatccaggttcaatctcactctacattctttcct 36154531  T
Q  199 aaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    || ||||| ||||||| ||||  |||||||||||||||||||    
T  36154530 aatcattattagacatgttcaagcactcaaaagcatctaagg 36154489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 11581147 - 11580906
Alignment:
Q  1 tatatataatattcataactatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggcttctgtaattgggcaactcg 99  Q
    ||||||||||||||||||||| || ||||| ||||||| ||| | |||| ||||| ||||||| ||||||||| ||||  |||||||| ||||  |||||    
T  11581147 tatatataatattcataactaccccaaggttcaactctcaacgactcgtacgacaaagatcgcaaaatcctaaacaagcattctgtaaatgggtcactcg 11581048  T
Q  100 cgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattct-taattaatccaggctcaatcttaatctgaagtcttgcct 198  Q
    ||||||||||| |||| ||||||||||||| |||||||||| |||  |||  || |||||  |||  ||||||| ||||||| | |||  | |||| |||    
T  11581047 cgaggcgagagcctctgctcgccatggcgagttcaggtcagattctcaaagttttattctaaaatctatccaggttcaatctcattctacattctttcct 11580948  T
Q  199 aaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    || ||||| || |||| ||||| ||||||||||| |||||||    
T  11580947 aatcattattaaacatgttcaggcactcaaaagcttctaagg 11580906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 238
Target Start/End: Original strand, 22144294 - 22144508
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| ||||||| ||||| |||||||||| ||||||| ||||||||| ||||  |||||||| |||||||||||||||||||||| |||||||||| ||    
T  22144294 aaggttcaactctcaacaactcgtgcgacaaagatcgcaaaatcctaaacaagcattctgtaactgggcaactcgcgaggcgagagcctctactcgctat 22144393  T
Q  125 ggcgaattcaggt-cagcttcgaaaaagttcattctt-aattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagac 222  Q
    ||||| |||||||  | || | ||||| | ||||||| ||||| |||||| ||||||| |||||  | |||| ||||| ||||  || |||| ||||| |    
T  22144394 ggcgagttcaggtgtaactcccaaaaa-tccattcttaaattattccaggttcaatctcaatctagaatctttcctaatcattgttacacatgttcaggc 22144492  T
Q  223 actcaaaagcatctaa 238  Q
    |||||||| |||||||    
T  22144493 actcaaaatcatctaa 22144508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 26 - 244
Target Start/End: Original strand, 1096711 - 1096931
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||||||||| ||||||| | |||||||| ||||||| |||| |||| ||||| ||||||   ||||  |||||||||||||||| ||||||||||| |    
T  1096711 aaggtccaacttttaacaacttgtgcgacagagatcgcaaaattctaaaaaggcattctgtttctgggtcactcgcgaggcgagagcctctactcgccgt 1096810  T
Q  125 ggcgaattcaggtcagcttcgaaaaagttcattct-taattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagaca 223  Q
    ||||| |||||||||| ||   |||||||||||||  |||   |||||  ||||||| |  ||  | |||| ||||| ||||| ||||||| ||||| ||    
T  1096811 ggcgagttcaggtcagatttccaaaagttcattctgcaatctttccagattcaatctcatcctacattctttcctaatcattattagacatgttcaggca 1096910  T
Q  224 ctcaaaagcatctaaggttca 244  Q
    |||||||||||||||||||||    
T  1096911 ctcaaaagcatctaaggttca 1096931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 26496160 - 26496232
Alignment:
Q  57 agatcgcgaaatcctaacaaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    ||||||| |||||||||||||||||||| ||| || |||||||||||||||||| ||||||||||||||||||    
T  26496160 agatcgcaaaatcctaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcga 26496232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 26 - 234
Target Start/End: Original strand, 9078196 - 9078406
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| |||| |||||||| | |||||||||||||||| |||||||||||||||  |||||   ||||  |||||||||||||||| |||| |||||| |    
T  9078196 aaggttcaacccttaacaacttgtgcgacacagatcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgt 9078295  T
Q  125 ggcgaattcaggtcag-cttcgaaaaagttcattcttaattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagaca 223  Q
    ||||| ||||||||||  ||| |||   |||||||| |||   |||||| ||||||| | |||  | | || ||||| ||||| ||||||| ||||| ||    
T  9078296 ggcgagttcaggtcagaattcaaaaggtttcattctaaatctttccaggttcaatctcattctacattttttcctaatcattattagacatgttcaggca 9078395  T
Q  224 ctcaaaagcat 234  Q
    |||||||||||    
T  9078396 ctcaaaagcat 9078406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 29325067 - 29324994
Alignment:
Q  57 agatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    ||||||| ||||||||| ||||||||||| ||| || |||||||||||||||||| ||||||||||||||||||    
T  29325067 agatcgcaaaatcctaaacaaggcttctgaaataggacaactcgcgaggcgagaggctctactcgccatggcga 29324994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 244
Target Start/End: Complemental strand, 21329326 - 21329152
Alignment:
Q  72 aacaaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggt-cagcttcgaaaaagttcatt-cttaattaatc 168  Q
    |||||||| |||||||| | || || |||||||||||||| |||||||||| ||||||| |||| || || || | ||||| |||||| || ||||| ||    
T  21329326 aacaaggcattctgtaactaggtaattcgcgaggcgagagcctctactcgctatggcgagttcaagtgcaactcccaaaaa-ttcattcctaaattattc 21329228  T
Q  169 caggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||||| |||||  | ||||  |||| ||| ||||||||| ||||| ||||||||| |||||||||||||    
T  21329227 caggttcaatctcaatctagaatcttttctaatcataactagacatgttcaggcactcaaaaacatctaaggttca 21329152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 240
Target Start/End: Complemental strand, 21986024 - 21985808
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggct-tctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| ||||||| ||||| |||||| ||| || |||| ||| ||||||||| |  |||||   ||||  |||||||||||||| | |||| || ||| |    
T  21986024 aaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaaacctaacaagacactctgtttctgggtcactcgcgaggcgagggcctctgcttgccgt 21985925  T
Q  125 ggcgaattcaggtcagc-ttcgaaaaagttcattcttaattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagaca 223  Q
    ||||| ||||||||||  ||| ||||  |||||||| |||   |||||| ||||||| | |||  | |||| ||||| ||||| ||||||| ||||| ||    
T  21985924 ggcgagttcaggtcagaattccaaaagtttcattctaaatctttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggca 21985825  T
Q  224 ctcaaaagcatctaagg 240  Q
    |||||||||||||||||    
T  21985824 ctcaaaagcatctaagg 21985808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 5889006 - 5888940
Alignment:
Q  72 aacaaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    |||||||| |||||||| |||| | ||||||||||||||| |||||||||||||||||| |||||||    
T  5889006 aacaaggcattctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggt 5888940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 244
Target Start/End: Complemental strand, 21871462 - 21871228
Alignment:
Q  13 tcataactatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaa-atcctaacaaggc-ttctgtaattgggcaactcgcgaggcgagag 110  Q
    |||| ||||||| ||||| |||||| |||||| || |||||||  |||||||   | |||| |||||| ||||||| ||||  | |||||||| || |||    
T  21871462 tcattactatcccaaggttcaactcataacaactcatgcgacaaggatcgcgtttaacctagcaaggcattctgtatttggttagctcgcgagccgggag 21871363  T
Q  111 tctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattct-taattaatccaggctcaatcttaatctgaagtcttgcctaaccattacta 209  Q
     |||||||||||||||||| | ||||||||  ||  |||||| |||||  ||||   |||||| ||||||| |  ||  | |||| ||||| ||||| ||    
T  21871362 cctctactcgccatggcgagtacaggtcagaatcacaaaagtccattccataatctttccaggttcaatctcatcctacactctttcctaatcattaata 21871263  T
Q  210 gacatcttcagacactcaaaagcatctaaggttca 244  Q
     |||| ||||| |||||||||||||||||||||||    
T  21871262 aacatgttcaggcactcaaaagcatctaaggttca 21871228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 244
Target Start/End: Complemental strand, 21875742 - 21875508
Alignment:
Q  13 tcataactatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaa-atcctaacaaggc-ttctgtaattgggcaactcgcgaggcgagag 110  Q
    |||| ||||||| ||||| |||||| |||||| || |||||||  |||||||   | |||| |||||| ||||||| ||||  | |||||||| || |||    
T  21875742 tcattactatcccaaggttcaactcataacaactcatgcgacaaggatcgcgtttaacctagcaaggcattctgtatttggttagctcgcgagccgggag 21875643  T
Q  111 tctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattct-taattaatccaggctcaatcttaatctgaagtcttgcctaaccattacta 209  Q
     |||||||||||||||||| | ||||||||  ||  |||||| |||||  ||||   |||||| ||||||| |  ||  | |||| ||||| ||||| ||    
T  21875642 cctctactcgccatggcgagtacaggtcagaatcacaaaagtccattccataatctttccaggttcaatctcatcctacactctttcctaatcattaata 21875543  T
Q  210 gacatcttcagacactcaaaagcatctaaggttca 244  Q
     |||| ||||| |||||||||||||||||||||||    
T  21875542 aacatgttcaggcactcaaaagcatctaaggttca 21875508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 240
Target Start/End: Complemental strand, 22959339 - 22959194
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcgaattcagg-tcagcttcgaaaaagttcattcttaa-ttaatccaggctcaatcttaatctgaagtct 193  Q
    ||||||||||||||| |||||||||||||||||| |||||| |||| |||  |||| |||||||| || |   |||||| ||||||| | |||  | |||    
T  22959339 ctcgcgaggcgagagcctctactcgccatggcgagttcaggttcag-ttcacaaaaattcattctaaagtctctccaggttcaatctcattctccaatct 22959241  T
Q  194 tgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    | ||||| ||||| ||||||| ||||| ||||||||| |||||||||    
T  22959240 ttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 22959194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 240
Target Start/End: Original strand, 25421776 - 25421992
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggct-tctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| ||||||| ||||| |||||| ||| || |||| |||||||||||||||  || ||   | ||  |||||||||||||||| ||||||||||| |    
T  25421776 aaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactcggtttctaggtcactcgcgaggcgagagcctctactcgccgt 25421875  T
Q  125 ggcgaattcaggtcag-cttcgaaaaagttcattcttaattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagaca 223  Q
    ||||| |||| |||||  |||  |||  |||||||| |||   ||||||  |||||| |  || |  |||| ||||| ||||| ||||||| ||||| ||    
T  25421876 ggcgagttcaagtcagatttccgaaagtttcattctaaatctttccaggtccaatctcatcctaagttctttcctaatcattaatagacatgttcaggca 25421975  T
Q  224 ctcaaaagcatctaagg 240  Q
    |||||||||||||||||    
T  25421976 ctcaaaagcatctaagg 25421992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 19660547 - 19660494
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  19660547 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 19660494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 22075419 - 22075472
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  22075419 tcttacctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 22075472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 21501967 - 21501919
Alignment:
Q  89 tgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    |||| ||||||||||||||||| |||||||||| ||||||| |||||||    
T  21501967 tgggtaactcgcgaggcgagagcctctactcgctatggcgagttcaggt 21501919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 240
Target Start/End: Complemental strand, 23390304 - 23390157
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagtt-cattctt-aattaatccaggctcaatcttaatctgaagtc 192  Q
    ||||| ||||||| || |||||||||||||||||| ||||||||||  ||  | ||||| ||||||  |||   |||||| ||||||| |  ||  | ||    
T  23390304 actcgtgaggcgatagcctctactcgccatggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattc 23390205  T
Q  193 ttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    || ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  23390204 tttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 23390157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 15441763 - 15441725
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcgaattca 134  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  15441763 ctcgcgaggcgagagtatctactcgccatggcgagttca 15441725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 25744036 - 25744074
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcgaattca 134  Q
    ||||||||||||||| |||||||||||||||||| ||||    
T  25744036 ctcgcgaggcgagagcctctactcgccatggcgagttca 25744074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 19669311 - 19669360
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    |||| ||||| ||||| ||||||| ||||||||||||||| |||||||||    
T  19669311 tctttcctaatcattattagacatgttcagacactcaaaaacatctaagg 19669360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 203 - 244
Target Start/End: Complemental strand, 21292679 - 21292638
Alignment:
Q  203 attactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||||| ||||| |||||||||||||||||||||||    
T  21292679 attattagacatgttcaggcactcaaaagcatctaaggttca 21292638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 21292778 - 21292733
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||||||||||||| |||| |||||| |||||| ||||||||||    
T  21292778 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcag 21292733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 21295072 - 21295039
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||||||||||||| |||||||||||||||||    
T  21295072 ctcgcgaggcgagagtatctactcgccatggcga 21295039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 137
Target Start/End: Complemental strand, 21741345 - 21741308
Alignment:
Q  100 cgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  21741345 cgaggcgagagcctctactcgccatggcgagttcaggt 21741308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 22075332 - 22075377
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||||||||||||| |||| |||||| |||||| ||||||||||    
T  22075332 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcag 22075377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 22107181 - 22107136
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||||||||||||| |||| |||||||||| || ||||||||||    
T  22107181 actcgcgaggcgagagcctctgctcgccatggtgagttcaggtcag 22107136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 23337097 - 23337064
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||||||||||||| |||||||||||||||||    
T  23337097 ctcgcgaggcgagagtatctactcgccatggcga 23337064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 25535285 - 25535318
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||||||||||||| |||||||||||||||||    
T  25535285 ctcgcgaggcgagagtatctactcgccatggcga 25535318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 137
Target Start/End: Complemental strand, 26011856 - 26011799
Alignment:
Q  80 ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    |||||||| | | |||||||||||||||  | |||||||||||||||||| |||||||    
T  26011856 ttctgtaactagacaactcgcgaggcgaaggcctctactcgccatggcgagttcaggt 26011799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 79231 - 79107
Alignment:
Q  1 tatatataatattcataactatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggcttctgtaattgggcaactcg 99  Q
    |||||| |||||||||||||| || ||||| ||||||| ||  | |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||    
T  79231 tatatacaatattcataactaccccaaggttcaactctcaatgactcgtgcgacaaagatcgcaaaatcctaaacaaggcttctgtaattgggcaactcg 79132  T
Q  100 cgaggcgagagtctctactcgccat 124  Q
    ||||||||||| |||||||||||||    
T  79131 cgaggcgagagcctctactcgccat 79107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 240
Target Start/End: Complemental strand, 17022 - 16876
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcagc-ttcgaaaaagttcattcttaattaatccaggctcaatcttaatctgaagtct 193  Q
    |||||||||||||||| |||| ||| || |||||| ||||||||||  ||| ||||  |||||||| |||   |||||| ||||||| | |||  | |||    
T  17022 actcgcgaggcgagagcctctgctctccgtggcgagttcaggtcagaattccaaaagtttcattctaaatctttccaggttcaatctcattctacattct 16923  T
Q  194 tgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    | ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  16922 ttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 16876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 244
Target Start/End: Complemental strand, 79109 - 79019
Alignment:
Q  154 cattcttaattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    ||||||||||||||||||| ||||||| | |||  | || | ||||| ||||| || |||| ||||  |||||||||||||||||||||||    
T  79109 cattcttaattaatccaggttcaatctcattctacattccttcctaatcattattaaacatgttcatgcactcaaaagcatctaaggttca 79019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 41598403 - 41598644
Alignment:
Q  1 tatatataatattcataactatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcct-aacaaggcttctgtaattgggcaactcg 99  Q
    ||||||||||||||||||||| || ||||| ||||||| ||| | ||||||| || ||||||| ||||||| ||||||  |||||||| | ||  |||||    
T  41598403 tatatataatattcataactaccccaaggttcaactctcaacgactcgtgcggcaaagatcgcaaaatcctaaacaagcattctgtaactaggtcactcg 41598502  T
Q  100 cgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattct-taattaatccaggctcaatcttaatctgaagtcttgcct 198  Q
    ||||||||||| |||| ||||||||||||| |||||||||| |||  |||  ||||||||  |||   |||||| ||||||| | |||  | |||| | |    
T  41598503 cgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaatctcattctacattctttcat 41598602  T
Q  199 aaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    || ||||| ||||||| ||||| |||||||||||||||||||    
T  41598603 aatcattattagacatgttcaggcactcaaaagcatctaagg 41598644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 80 - 244
Target Start/End: Original strand, 6520667 - 6520832
Alignment:
Q  80 ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattctt-aattaatccaggctcaat 178  Q
    |||||||||||||||  | |||||||||| | |||||||||||||||||||||||||||    ||  |||| | ||||||| || || | |||| ||| |    
T  6520667 ttctgtaattgggcagtttgcgaggcgagggcctctactcgccatggcgaattcaggtctaactctcaaaaatccattcttaaactatttcaggttcagt 6520766  T
Q  179 cttaatctgaagtcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    ||||||||  | |||| |||||  |||| ||||||| ||||||||||||||| |||||||||||||    
T  6520767 cttaatctccaatctttcctaattattattagacatgttcagacactcaaaaacatctaaggttca 6520832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 19801329 - 19801088
Alignment:
Q  1 tatatataatattcataactatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcct-aacaaggcttctgtaattgggcaactcg 99  Q
    |||||| |||||||||||||| || ||||| ||||||| ||  | |||||||||| ||||||  ||||||| ||||||||||||||||       |||||    
T  19801329 tatatacaatattcataactaccccaaggttcaactctcaatgactcgtgcgacaaagatcgaaaaatcctaaacaaggcttctgtaacacaagtactcg 19801230  T
Q  100 cgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattctt-aattaatccaggctcaatcttaatctgaagtcttgcct 198  Q
    |||||||||   |||||||||||||||||| |||||||     ||  | |||||| ||||| || || |||||| ||||||||| |||  |||||| |||    
T  19801229 cgaggcgaggacctctactcgccatggcgagttcaggtataactcccacaagttcgttcttaaactattccaggttcaatcttattctctagtctttcct 19801130  T
Q  199 aaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    || ||||| ||||||| ||||| |||||| | ||||||||||    
T  19801129 aatcattattagacatgttcaggcactcatatgcatctaagg 19801088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 21415073 - 21415000
Alignment:
Q  57 agatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    ||||||| ||||||||| ||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  21415073 agatcgcaaaatcctaaacaaggtttctgtaattggacaactcgcgaggcgagaggctctactcgccatggcga 21415000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 240
Target Start/End: Original strand, 6759500 - 6759717
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggct-tctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| ||||||||| ||| | ||||||||||||| || ||||||||||||| |  |||||   ||||  |||||||||||||||| |||| |||||| |    
T  6759500 aaggttcaactcttagcaacttgtgcgacacagattgcaaaatcctaacaagacactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgt 6759599  T
Q  125 ggcgaattcaggtcag-cttcgaaaaagttcattcttaatta-atccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagac 222  Q
    ||||| ||||||||||  ||| ||||  |||||||| || ||  |||| | ||||||| | |||  | |||| ||||| ||||| ||||||| ||||  |    
T  6759600 ggcgagttcaggtcagatttccaaaagtttcattctaaaatatttccaagttcaatctcattctacattctttcctaatcattattagacatgttcaagc 6759699  T
Q  223 actcaaaagcatctaagg 240  Q
    ||||||||||||||||||    
T  6759700 actcaaaagcatctaagg 6759717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 7300909 - 7300836
Alignment:
Q  57 agatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    ||||||| ||||||||| ||||||||||| ||| || |||||||||||||||||| ||||||||||||||||||    
T  7300909 agatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcga 7300836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 80 - 244
Target Start/End: Complemental strand, 38855072 - 38854908
Alignment:
Q  80 ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattctt-aattaatccaggctcaat 178  Q
    |||||||| ||||||| |||||||||||| | |||||||||||||||||| |||||||     ||  |||| ||| ||||| || || |||||| | |||    
T  38855072 ttctgtaactgggcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtgtaactctcaaaa-ttcgttcttaaactattccaggttaaat 38854974  T
Q  179 cttaatctgaagtcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    ||||||||  | |||| ||||| ||||| ||||||| ||||| ||||||||| |||||||||||||    
T  38854973 cttaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttca 38854908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 129
Target Start/End: Complemental strand, 6608100 - 6608028
Alignment:
Q  58 gatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||| ||||||||| ||||||||||| ||| || |||||||||||||||||| ||||||||||||||||||    
T  6608100 gatcgccaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcga 6608028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 45134752 - 45134679
Alignment:
Q  57 agatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    ||||||| ||||||||| ||||||||||| ||| || | |||||||||||||||| ||||||||||||||||||    
T  45134752 agatcgcaaaatcctaaacaaggcttctgaaatgggactactcgcgaggcgagaggctctactcgccatggcga 45134679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 140
Target Start/End: Complemental strand, 16092218 - 16092103
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| ||||||||||||| | ||| |||||||||||| ||||||||||| |||  |||||   ||||  ||||| |||||||||| |||| |||||| |    
T  16092218 aaggttcaactcttaacaacttgtgtgacacagatcgcaaaatcctaacagggcactctgtttctgggtcactcgggaggcgagagcctctgctcgccgt 16092119  T
Q  125 ggcgaattcaggtcag 140  Q
    ||||| ||||||||||    
T  16092118 ggcgagttcaggtcag 16092103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 39834131 - 39834188
Alignment:
Q  80 ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    |||||||| |||| | ||||||||||||||| |||||||||||||||||| |||||||    
T  39834131 ttctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggt 39834188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 244
Target Start/End: Original strand, 20536521 - 20536672
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaag-ttcattct-taattaatccaggctcaatcttaatctgaagtc 192  Q
    |||||||||||||||| ||||||||||| |||||| ||||||||||  ||  | ||| ||||||||  |||   |||||| ||||||| |  ||  | ||    
T  20536521 actcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccataagtttcattctacaatctttccaggttcaatctcatcctacattc 20536620  T
Q  193 ttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    || ||||| |||||  |||||| ||||| |||||||||||||||||||||||    
T  20536621 tttcctaatcattatcagacatgttcaggcactcaaaagcatctaaggttca 20536672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 22875309 - 22875424
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggct-tctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| ||||||||||||| | |||||||| ||||||| ||  ||||||||| |  |||||   ||||  |||||||||||||||| |||| |||| |||    
T  22875309 aaggttcaactcttaacaacttgtgcgacatagatcgcaaagccctaacaagtcactctgtttctgggtcactcgcgaggcgagagcctctgctcgtcat 22875408  T
Q  125 ggcgaattcaggtcag 140  Q
    ||||| ||||||||||    
T  22875409 ggcgagttcaggtcag 22875424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 5865987 - 5865934
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  5865987 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 5865934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 17141324 - 17141377
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  17141324 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 17141377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 21285897 - 21285954
Alignment:
Q  80 ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    |||||||| ||||||||| |||||||||| | ||||||||||||| |||| |||||||    
T  21285897 ttctgtaactgggcaacttgcgaggcgagggcctctactcgccatagcgagttcaggt 21285954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 21491403 - 21491456
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  21491403 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 21491456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 21918808 - 21918763
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||||||||||||| |||| ||||||||||||| ||||||||||    
T  21918808 actcgcgaggcgagagcctctgctcgccatggcgagttcaggtcag 21918763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 23406694 - 23406739
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||||||||||||| ||||||||||| |||||| ||||||||||    
T  23406694 actcgcgaggcgagagcctctactcgccgtggcgagttcaggtcag 23406739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 45130741 - 45130688
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  45130741 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 45130688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 21923633 - 21923589
Alignment:
Q  196 cctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    ||||| ||||| ||||||| |||||||||||||||||||||||||    
T  21923633 cctaatcattattagacatgttcagacactcaaaagcatctaagg 21923589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 13507980 - 13507914
Alignment:
Q  7 taatattcataactatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaa 73  Q
    |||||||||||||||||| | | | ||||||| ||||| |||||||||| ||||||| ||| |||||    
T  13507980 taatattcataactatcccacgattcaactctcaacaactcgtgcgacaaagatcgcaaaaacctaa 13507914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 13597512 - 13597446
Alignment:
Q  7 taatattcataactatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaa 73  Q
    |||||||||||||||||| | | | ||||||| ||||| |||||||||| ||||||| ||| |||||    
T  13597512 taatattcataactatcccacgattcaactctcaacaactcgtgcgacaaagatcgcaaaaacctaa 13597446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 7373160 - 7373209
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  7373160 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 7373209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 18818217 - 18818172
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||||||||||||| |||| |||||| |||||| ||||||||||    
T  18818217 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcag 18818172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 18878947 - 18878898
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  18878947 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 18878898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 20527746 - 20527779
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||||||||||||| |||||||||||||||||    
T  20527746 ctcgcgaggcgagagtatctactcgccatggcga 20527779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 22627146 - 22627195
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  22627146 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 22627195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 23406792 - 23406841
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  23406792 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 23406841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 23648964 - 23649013
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  23648964 tctttcctaatcattattagacatgttcagtcactcaaaagcatctaagg 23649013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 25362948 - 25362903
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||| ||||||||||| |||| ||||||||||||| ||||||||||    
T  25362948 actctcgaggcgagagcctctgctcgccatggcgagttcaggtcag 25362903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 18818115 - 18818071
Alignment:
Q  196 cctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  18818115 cctaatcattattagacatgttcaggcactcaaaagcatctaagg 18818071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 21389142 - 21389110
Alignment:
Q  212 catcttcagacactcaaaagcatctaaggttca 244  Q
    ||||||||| |||||||||||||||||||||||    
T  21389142 catcttcaggcactcaaaagcatctaaggttca 21389110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 21395672 - 21395640
Alignment:
Q  212 catcttcagacactcaaaagcatctaaggttca 244  Q
    ||||||||| |||||||||||||||||||||||    
T  21395672 catcttcaggcactcaaaagcatctaaggttca 21395640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 137
Target Start/End: Original strand, 21674021 - 21674061
Alignment:
Q  97 tcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    |||||||||||| | |||||||||||||||||| |||||||    
T  21674021 tcgcgaggcgagggcctctactcgccatggcgagttcaggt 21674061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 212 - 244
Target Start/End: Complemental strand, 21790165 - 21790133
Alignment:
Q  212 catcttcagacactcaaaagcatctaaggttca 244  Q
    ||||||||| |||||||||||||||||||||||    
T  21790165 catcttcaggcactcaaaagcatctaaggttca 21790133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 31971660 - 31971708
Alignment:
Q  196 cctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    ||||| ||||| ||||||| ||||| ||| |||||||||||||||||||    
T  31971660 cctaatcattattagacatgttcaggcacacaaaagcatctaaggttca 31971708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 37116664 - 37116704
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcgaattcagg 136  Q
    ||||||||||||||| |||||||||| ||||||| ||||||    
T  37116664 ctcgcgaggcgagagcctctactcgctatggcgagttcagg 37116704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 240
Target Start/End: Original strand, 433230 - 433467
Alignment:
Q  5 tataatattcataactatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgag 103  Q
    ||||||||||||| ||| || ||||| ||||||| ||| | |||||||||| ||||||| ||||||||| ||||  || || || ||||  |||||||||    
T  433230 tataatattcatagctaccccaaggttcaactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattttgcaactgggtcactcgcgag 433329  T
Q  104 gcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattct-taattaatccaggctcaatcttaatctgaagtcttgcctaacc 202  Q
    ||||||| |||| ||||||||||||| |||||||||| |||  |||  ||||||||  |||   |||||| ||||||| | |||  | |||| ||||| |    
T  433330 gcgagagcctctgctcgccatggcgagttcaggtcagattcccaaagtttcattctaaaatctttccaggttcaatctcattctacattctttcctaatc 433429  T
Q  203 attactagacatcttcagacactcaaaagcatctaagg 240  Q
    |||| ||||||| |||||||||||||||||||||||||    
T  433430 attaatagacatgttcagacactcaaaagcatctaagg 433467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 26 - 239
Target Start/End: Complemental strand, 50210090 - 50209875
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggct-tctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| ||||||| ||||| |||||| ||| || |||| |||||||||||||||  |||||   ||||  |||||||||||||||| |||| |||||| |    
T  50210090 aaggttcaactctcaacaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgt 50209991  T
Q  125 ggcgaattcaggtcag-cttcgaaaaagttcattcttaattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagaca 223  Q
    ||||| ||||||||||  ||| ||||  |||||||| |||   |||||| ||||||| | |||  | |||| ||||| ||||| ||||||| ||||| ||    
T  50209990 ggcgagttcaggtcagaattccaaaagtttcattctaaatctttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggca 50209891  T
Q  224 ctcaaaagcatctaag 239  Q
    |||||| |||| ||||    
T  50209890 ctcaaaggcatataag 50209875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 20579739 - 20579812
Alignment:
Q  57 agatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    ||||||| ||||||||| ||||||||||| ||| || |||||||||||||||||| ||||||||||||||||||    
T  20579739 agatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcga 20579812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 136
Target Start/End: Original strand, 26065190 - 26065295
Alignment:
Q  33 aactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaa 130  Q
    ||||| |||||  |||||||||| ||||||| ||| ||||| |||||  |||||||| |||||||||||||||||||||| |||||||||| |||||||     
T  26065190 aactcataacatctcgtgcgacaaagatcgcaaaaccctaaacaaggtattctgtaactgggcaactcgcgaggcgagagcctctactcgctatggcgag 26065289  T
Q  131 ttcagg 136  Q
    ||||||    
T  26065290 ttcagg 26065295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 72 - 244
Target Start/End: Complemental strand, 22921698 - 22921524
Alignment:
Q  72 aacaaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattctt-aattaatcc 169  Q
    |||||||| |||||||| | ||||  |||||||||||||| |||||||||||||||||| |||| |||    ||  |||| ||| ||||| || || |||    
T  22921698 aacaaggcattctgtaactaggcagttcgcgaggcgagagcctctactcgccatggcgagttcaagtctaactctcaaaaattcgttcttaaactattcc 22921599  T
Q  170 aggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
     || ||||||| |||||  | |||| ||||| ||||| ||||||| ||||| ||||||||| |||||||||||||    
T  22921598 tggttcaatctcaatctccaatctttcctaatcattattagacatgttcaggcactcaaaaacatctaaggttca 22921524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 26 - 240
Target Start/End: Original strand, 22532513 - 22532729
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggct-tctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| ||||||| ||||  |||||| ||| || |||| ||||||||||||| |  |||||  |||||  |||||||||||||||| |||| ||| || |    
T  22532513 aaggttcaactctcaacagctcgtgcaacaaaggtcgcaaaatcctaacaagtcactctgtttttgggtcactcgcgaggcgagagcctctgctcaccgt 22532612  T
Q  125 ggcgaattcaggtcagcttcgaaaaagttcattct-taattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagaca 223  Q
    ||||| |||| ||||| ||   |||||||||||||  |||   |||||| ||||||| |  ||  | |||| ||||| ||||| ||||||| ||||| ||    
T  22532613 ggcgagttcaagtcagatttccaaaagttcattctacaatccttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggca 22532712  T
Q  224 ctcaaaagcatctaagg 240  Q
    |||||||||||||||||    
T  22532713 ctcaaaagcatctaagg 22532729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 135
Target Start/End: Original strand, 16758895 - 16759005
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| ||||||| ||||| |||||||||| ||||||| ||||||||| | ||  |||||||| | |||||||||||||| ||| | ||||||| || ||    
T  16758895 aaggttcaactctcaacaactcgtgcgacaaagatcgcaaaatcctaaacgagcattctgtaactaggcaactcgcgaggtgagggcctctacttgctat 16758994  T
Q  125 ggcgaattcag 135  Q
    ||||| |||||    
T  16758995 ggcgagttcag 16759005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 138
Target Start/End: Complemental strand, 52927815 - 52927745
Alignment:
Q  69 cctaacaaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggtc 138  Q
    ||||||||||| |||||||| ||| ||| |||||||||||| | |||||||||||||||||| ||||||||    
T  52927815 cctaacaaggcattctgtaactggtcaattcgcgaggcgagggcctctactcgccatggcgagttcaggtc 52927745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 239
Target Start/End: Original strand, 34510094 - 34510239
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattct-taattaatccaggctcaatcttaatctgaagtct 193  Q
    ||||| |||||||||| |||| |||||| |||||| |||||||||| ||   |||||||||||||  |||   |||||| ||||||| |  ||  | |||    
T  34510094 actcgtgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagttcattctacaatctttccaggttcaatctcatcctacattct 34510193  T
Q  194 tgcctaaccattactagacatcttcagacactcaaaagcatctaag 239  Q
    | ||||| ||||| ||||||| ||||| ||||||||||||||||||    
T  34510194 ttcctaatcattattagacatgttcaggcactcaaaagcatctaag 34510239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 32 - 130
Target Start/End: Complemental strand, 35260951 - 35260851
Alignment:
Q  32 caactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||| |||||  |||||||||| ||||||| ||||||||| |||||  || ||||| |||| ||||||||||||||| | |||||||||| |||||||    
T  35260951 caactcataacatctcgtgcgacaaagatcgcaaaatcctaagcaaggtattttgtaactgggaaactcgcgaggcgagggcctctactcgctatggcga 35260852  T
Q  130 a 130  Q
    |    
T  35260851 a 35260851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 20637165 - 20637206
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    ||||||||||||||| |||||||||||||||||| |||||||    
T  20637165 ctcgcgaggcgagagcctctactcgccatggcgagttcaggt 20637206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 22355895 - 22355842
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  22355895 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 22355842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 22357581 - 22357528
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  22357581 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 22357528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 27250450 - 27250397
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  27250450 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 27250397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 38801199 - 38801154
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||||||||||||| ||||||||||| |||||| ||||||||||    
T  38801199 actcgcgaggcgagagcctctactcgccgtggcgagttcaggtcag 38801154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 21342560 - 21342612
Alignment:
Q  192 cttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    ||||||||| ||||| || |||| ||||||||||||||| |||||||||||||    
T  21342560 cttgcctaatcattattatacatattcagacactcaaaatcatctaaggttca 21342612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 21347425 - 21347477
Alignment:
Q  192 cttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    ||||||||| ||||| || |||| ||||||||||||||| |||||||||||||    
T  21347425 cttgcctaatcattattatacatattcagacactcaaaatcatctaaggttca 21347477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 33681309 - 33681365
Alignment:
Q  81 tctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    ||||||| |||| || |||||||||||||| |||| ||||||||||||| |||||||    
T  33681309 tctgtaactgggtaattcgcgaggcgagagcctctgctcgccatggcgagttcaggt 33681365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 243
Target Start/End: Complemental strand, 41049701 - 41049626
Alignment:
Q  168 ccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttc 243  Q
    ||||| ||||||| ||||| ||  ||||||||||||||| || |||| ||||| |||||| || ||||||||||||    
T  41049701 ccaggttcaatctcaatctaaaaacttgcctaaccattattatacatgttcaggcactcagaaacatctaaggttc 41049626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 137
Target Start/End: Original strand, 21754350 - 21754392
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    |||||||||||||||| |||| ||||||||||||| |||||||    
T  21754350 actcgcgaggcgagagcctctgctcgccatggcgagttcaggt 21754392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 28194267 - 28194213
Alignment:
Q  83 tgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    ||||| |||| | ||||||||||||||| ||||||| |||||||||| |||||||    
T  28194267 tgtaaatgggtagctcgcgaggcgagagcctctacttgccatggcgagttcaggt 28194213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 20248592 - 20248633
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    |||||||||||| || |||||||||||||||||| |||||||    
T  20248592 ctcgcgaggcgatagcctctactcgccatggcgagttcaggt 20248633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 20846940 - 20846891
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  20846940 tcttacctaatcattattagacatgttcaggcactcaaaagcatctaagg 20846891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 21438091 - 21438124
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||||||||||||| |||||||||||||||||    
T  21438091 ctcgcgaggcgagagtatctactcgccatggcga 21438124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 22354376 - 22354335
Alignment:
Q  99 gcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||||||||| ||||||||||| |||||| ||||||||||    
T  22354376 gcgaggcgagagcctctactcgccgtggcgagttcaggtcag 22354335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 23763508 - 23763541
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||||||||||||| |||||||||||||||||    
T  23763508 ctcgcgaggcgagagtatctactcgccatggcga 23763541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 35981492 - 35981451
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    ||||||||||||||| |||||||| ||||||||| |||||||    
T  35981492 ctcgcgaggcgagagcctctactcaccatggcgagttcaggt 35981451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 21301243 - 21301199
Alignment:
Q  196 cctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  21301243 cctaatcattattagacatgttcaggcactcaaaagcatctaagg 21301199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 15517 - 15276
Alignment:
Q  1 tatatataatattcataactatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggcttctgtaattgggcaactcg 99  Q
    |||||||||||  |||||||| || ||||| ||||||| ||| |||||||||||| ||||||  ||||||||| ||||  || ||||| | ||  |||||    
T  15517 tatatataatacacataactaccccaaggttcaactctcaacgattcgtgcgacaaagatcgaaaaatcctaagcaagtattttgtaaataggtcactcg 15418  T
Q  100 cgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattct-taattaatccaggctcaatcttaatctgaagtcttgcct 198  Q
    ||||||||||| |||| ||||| ||||||| |||||||||| |||  |||  ||||||||  |||  ||||||  ||||||| | |||  | |||| |||    
T  15417 cgaggcgagagcctctgctcgctatggcgagttcaggtcagattcccaaagtttcattctaaaatctatccagattcaatctcattctacattctttcct 15318  T
Q  199 aaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    || ||||| || |||| ||||| |||||||||||||||||||    
T  15317 aatcattattaaacatattcaggcactcaaaagcatctaagg 15276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 33 - 240
Target Start/End: Complemental strand, 1947 - 1739
Alignment:
Q  33 aactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaat 131  Q
    |||||| ||| | |||||||||| ||||||| ||||||||| ||||  |||||||| ||||  |||||||||||||||| |||| |||||||||||||||    
T  1947 aactctcaacgactcgtgcgacaaagatcgcaaaatcctaaacaagcattctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgaat 1848  T
Q  132 tcaggtcagcttcgaaaaagttcattct-taattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagacactcaaaa 230  Q
    ||||||||| ||   |||  ||||||||  |||   |||||| ||||||| | |||  | |||| ||||| ||||| ||||||| ||||| |||||||||    
T  1847 tcaggtcagatttccaaagtttcattctaaaatctttccaggttcaatctcattctacattctttcctaatcattattagacatgttcaggcactcaaaa 1748  T
Q  231 gcatctaagg 240  Q
     |||||||||    
T  1747 -catctaagg 1739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 240
Target Start/End: Complemental strand, 16477 - 16260
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggct-tctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| |||||| |||||| | |||||||||||||||| |||||| ||||||||  |||||  |||||  |||||||||||||||| |||| ||||||||    
T  16477 aaggttcaactcctaacaacttgtgcgacacagatcgcaaaatcccaacaaggcactctgtttttgggtcactcgcgaggcgagagcctctgctcgccat 16378  T
Q  125 ggcgaattcaggtcag-cttcgaaaaagttcattc-ttaattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagac 222  Q
    ||||| ||||||| ||  ||| |||   |||||||   |||   |||||| ||||||| | ||| || |||| ||||| ||||| ||||||| ||||| |    
T  16377 ggcgagttcaggttagatttccaaacgtttcattcgaaaatctttccaggttcaatctcattctaaattctttcctaatcattattagacatgttcaggc 16278  T
Q  223 actcaaaagcatctaagg 240  Q
    ||||||||||||||||||    
T  16277 actcaaaagcatctaagg 16260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 16999 - 17240
Alignment:
Q  1 tatatataatattcataactatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggcttctgtaattgggcaactcg 99  Q
    ||||||||||| ||||||| ||  |||||| ||||| | ||| | |||||| ||| ||||||| ||||||||| ||||  |||||||| | ||  |||||    
T  16999 tatatataatactcataaccattataaggttcaactatcaacgactcgtgctacaaagatcgcaaaatcctaaacaagtattctgtaaataggtcactcg 17098  T
Q  100 cgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattct-taattaatccaggctcaatcttaatctgaagtcttgcct 198  Q
    ||||||||||| |||| ||||||||||||| |||||||||  |||  |||  || |||||  |||  ||||||| ||||||| | |||  | |||| |||    
T  17099 cgaggcgagagcctctgctcgccatggcgagttcaggtcatattctcaaagttttattctaaaatctatccaggttcaatctcattctacattctttcct 17198  T
Q  199 aaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    || ||||| || |||| ||||| |||||||||||||||||||    
T  17199 aatcattattaaacatgttcaggcactcaaaagcatctaagg 17240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 2e-21; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 21238952 - 21238880
Alignment:
Q  57 agatcgcgaaatcctaacaaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    ||||||| |||||||||||||||||||| ||| || |||||||||||||||||| ||||||||||||||||||    
T  21238952 agatcgcaaaatcctaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcga 21238880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 21241502 - 21241430
Alignment:
Q  57 agatcgcgaaatcctaacaaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    ||||||| |||||||||||||||||||| ||| || |||||||||||||||||| ||||||||||||||||||    
T  21241502 agatcgcaaaatcctaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcga 21241430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 24504977 - 24505049
Alignment:
Q  57 agatcgcgaaatcctaacaaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    ||||||| |||||||||||||||||||| ||| || |||||||||||||||||| ||||||||||||||||||    
T  24504977 agatcgcaaaatcctaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcga 24505049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 26 - 240
Target Start/End: Original strand, 22337359 - 22337575
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggct-tctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| ||||||| ||||| |||||| ||| || || | ||| ||||||||| || |||||   ||||  |||||||||||||||| ||||||||||| |    
T  22337359 aaggttcaactctcaacaactcgtgcaacaaaggtcacaaaaacctaacaagactctctgtttctgggtcactcgcgaggcgagagcctctactcgccgt 22337458  T
Q  125 ggcgaattcaggtcag-cttcgaaaaagttcattcttaattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagaca 223  Q
    ||||||||||||||||   || ||||  |||||||| |||   |||||| ||||||| |  ||  | |||| ||||| ||||| ||||||| |||| |||    
T  22337459 ggcgaattcaggtcagaactcaaaaagtttcattctaaatctttccaggttcaatctcatcctacattctttcctaatcattattagacatgttcataca 22337558  T
Q  224 ctcaaaagcatctaagg 240  Q
    |||||||||||||||||    
T  22337559 ctcaaaagcatctaagg 22337575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 31503873 - 31503946
Alignment:
Q  57 agatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    ||||||| ||||||||| ||||||||||| ||| || |||||||||||||||||| ||||||||||||||||||    
T  31503873 agatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcga 31503946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 31506439 - 31506512
Alignment:
Q  57 agatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    ||||||| ||||||||| ||||||||||| ||| || |||||||||||||||||| ||||||||||||||||||    
T  31506439 agatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcga 31506512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 240
Target Start/End: Complemental strand, 298622 - 298476
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaag-ttcattcttaattaatccaggctcaatcttaatctgaagtct 193  Q
    |||||||||||||||| ||||||||||| |||||| ||||||||||  ||  | ||| |||||||| |||   |||||| ||||||| |  ||  | |||    
T  298622 actcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattctaaatctttccaggttcaatctcatcctatattct 298523  T
Q  194 tgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    | ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  298522 ttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 298476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 240
Target Start/End: Original strand, 23660336 - 23660482
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattcttaattaat-ccaggctcaatcttaatctgaagtct 193  Q
    |||| ||||||||||| |||| |||||| |||||| |||||||||| ||| ||||  |||||||| || |  | ||||| ||||||| | |||  | |||    
T  23660336 actcacgaggcgagagcctctgctcgccgtggcgagttcaggtcagattccaaaagtttcattctaaaatctttccaggttcaatctcattctacattct 23660435  T
Q  194 tgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    | ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  23660436 ttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 23660482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 140
Target Start/End: Original strand, 23076692 - 23076800
Alignment:
Q  32 caactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggct-tctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaa 130  Q
    ||||||| ||||| |||||| ||| || |||| ||| |||||||||||  |||||   |||| ||||||||||||||||| ||||||||||| ||||||     
T  23076692 caactctcaacaactcgtgcaacaaaggtcgcaaaa-cctaacaaggcactctgtttctgggtaactcgcgaggcgagagcctctactcgccgtggcgag 23076790  T
Q  131 ttcaggtcag 140  Q
    ||||||||||    
T  23076791 ttcaggtcag 23076800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 23286261 - 23286314
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| |||||||||||||||||||||||||||||    
T  23286261 tctttcctaatcattattagacatgttcagacactcaaaagcatctaaggttca 23286314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 19672047 - 19672118
Alignment:
Q  1 tatatataatattcataactatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaa 73  Q
    |||| |||||||||||||||| || ||||| ||||||| ||||| |||||||||| ||||||| |||||||||    
T  19672047 tataaataatattcataacta-cccaaggttcaactctcaacaactcgtgcgacaaagatcgcaaaatcctaa 19672118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 240
Target Start/End: Complemental strand, 22134020 - 22133878
Alignment:
Q  97 tcgcgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattcttaattaatcc-aggctcaatcttaatctgaagtcttg 195  Q
    |||||||||||||| |||| ||||||||||||| ||||| |||| |||  |||| |||||||| || |  ||| ||| ||||||| | |||  | ||||     
T  22134020 tcgcgaggcgagagcctctgctcgccatggcgagttcagttcag-ttcacaaaa-ttcattctaaagtcttcctaggttcaatctcattctccaatcttt 22133923  T
Q  196 cctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  22133922 cctaatcattattagacatgttcaggcactcaaaagcatctaagg 22133878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 23207578 - 23207634
Alignment:
Q  80 ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcagg 136  Q
    |||||||| |||||||||||| ||||||||| |||||||||| ||||||| ||||||    
T  23207578 ttctgtaactgggcaactcgcaaggcgagagcctctactcgctatggcgagttcagg 23207634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 33 - 136
Target Start/End: Complemental strand, 20520062 - 20519957
Alignment:
Q  33 aactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaa 130  Q
    ||||| |||||  |||||| ||| ||||||| ||| ||||| |||||  |||||||| | |||||||||||||||||||| |||||| ||| |||||||     
T  20520062 aactcataacatctcgtgcaacaaagatcgcaaaaccctaaacaaggtattctgtaactaggcaactcgcgaggcgagagcctctacacgctatggcgac 20519963  T
Q  131 ttcagg 136  Q
    ||||||    
T  20519962 ttcagg 20519957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 136
Target Start/End: Complemental strand, 22412953 - 22412900
Alignment:
Q  83 tgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcagg 136  Q
    ||||| |||||||||| ||||||||||| |||||||||| ||||||| ||||||    
T  22412953 tgtaactgggcaactcacgaggcgagagcctctactcgctatggcgagttcagg 22412900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 23071673 - 23071620
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  23071673 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 23071620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 243
Target Start/End: Complemental strand, 37832 - 37785
Alignment:
Q  196 cctaaccattactagacatcttcagacactcaaaagcatctaaggttc 243  Q
    ||||| ||||| ||||||| ||||| ||||||||||||||||||||||    
T  37832 cctaatcattattagacatgttcaggcactcaaaagcatctaaggttc 37785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 138
Target Start/End: Original strand, 25176132 - 25176199
Alignment:
Q  72 aacaaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggtc 138  Q
    |||||||| |||||||| || |||  |||||||||||| | |||||||||||||||||| ||||||||    
T  25176132 aacaaggcattctgtaactgcgcagttcgcgaggcgagggcctctactcgccatggcgagttcaggtc 25176199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 136
Target Start/End: Original strand, 23005015 - 23005105
Alignment:
Q  47 cgtgcgacacagatcgcgaaatcctaacaaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcagg 136  Q
    ||||||||| ||||||| ||| ||||||||||  ||||| || |||||| |||||||||||||   |||||| ||| ||||||| ||||||    
T  23005015 cgtgcgacaaagatcgcaaaaccctaacaaggtattctgaaactgggcagctcgcgaggcgagccactctacccgctatggcgagttcagg 23005105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 28406297 - 28406335
Alignment:
Q  99 gcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    |||||||||||| |||||||||||||||||| |||||||    
T  28406297 gcgaggcgagagcctctactcgccatggcgagttcaggt 28406335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 22730943 - 22730894
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  22730943 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 22730894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 23654120 - 23654067
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| || ||||||||||||||||||||    
T  23654120 tctttcctaatcattattagacatgttcaggcagtcaaaagcatctaaggttca 23654067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 28292012 - 28291959
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||  ||||||| ||||| |||||||||||||||||||||||    
T  28292012 tctttcctaatcattcttagacatgttcaggcactcaaaagcatctaaggttca 28291959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 31756232 - 31756265
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcga 129  Q
    ||||||||||||||| ||||||||||||||||||    
T  31756232 ctcgcgaggcgagagcctctactcgccatggcga 31756265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 32451737 - 32451692
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||||||||||||| |||| |||||| |||||| ||||||||||    
T  32451737 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcag 32451692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 19672314 - 19672366
Alignment:
Q  192 cttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    ||||||||| ||||| || |||| |||| |||||||||| |||||||||||||    
T  19672314 cttgcctaatcattattatacatattcaaacactcaaaatcatctaaggttca 19672366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 23286174 - 23286218
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtca 139  Q
    |||||||||||||||| |||| |||||| |||||| |||||||||    
T  23286174 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtca 23286218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 69 - 244
Target Start/End: Original strand, 13227 - 13404
Alignment:
Q  69 cctaacaaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggt-cagcttcgaaaaagttcattcttaat-ta 165  Q
    ||||||||||| |||||||| |||  | ||||||||||||| | |||||||||||||||||| ||||||| || ||   ||||| |||||||||||  ||    
T  13227 cctaacaaggcattctgtaactggttagctcgcgaggcgagggcctctactcgccatggcgagttcaggtgcaactcacaaaaa-ttcattcttaaacta 13325  T
Q  166 atccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
     |||||| |||||||||||||  | |||| ||||| ||| | ||||||| ||||| ||||||||| |||||||||||||    
T  13326 ttccaggttcaatcttaatctccaatctttcctaatcataattagacatgttcaggcactcaaaaacatctaaggttca 13404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 30016 - 29983
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||||||||||||| |||||||||||||||||    
T  30016 ctcgcgaggcgagagtatctactcgccatggcga 29983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 26 - 134
Target Start/End: Complemental strand, 15976 - 15866
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgcca 123  Q
    ||||| |||||| |||||| | |||||||| ||||||| ||||||||| |||||| |||||||| |||||||||||||||||||| | || ||||||| |    
T  15976 aaggttcaactcataacaacttgtgcgacaaagatcgcaaaatcctaaacaaggcattctgtaactgggcaactcgcgaggcgagggcctatactcgcta 15877  T
Q  124 tggcgaattca 134  Q
    |||||| ||||    
T  15876 tggcgagttca 15866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 26 - 159
Target Start/End: Original strand, 39720 - 39854
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggct-tctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| |||| |||||||| | |||||||||||||||| ||||||| |||||||  |||||   ||||  |||||||||||||||| |||| |||||| |    
T  39720 aaggttcaacccttaacaacttgtgcgacacagatcgcaaaatcctgacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgt 39819  T
Q  125 ggcgaattcaggtcagcttcgaaaaagttcattct 159  Q
    ||||| |||||||||| ||   |||||||||||||    
T  39820 ggcgagttcaggtcagatttccaaaagttcattct 39854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 26 - 159
Target Start/End: Complemental strand, 75092 - 74958
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggct-tctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| |||| |||||||| | |||||||||||||||| ||||||| |||||||  |||||   ||||  |||||||||||||||| |||| |||||| |    
T  75092 aaggttcaacccttaacaacttgtgcgacacagatcgcaaaatcctgacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgt 74993  T
Q  125 ggcgaattcaggtcagcttcgaaaaagttcattct 159  Q
    ||||| |||||||||| ||   |||||||||||||    
T  74992 ggcgagttcaggtcagatttccaaaagttcattct 74958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 9445 - 9518
Alignment:
Q  57 agatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    ||||||| ||||||||| ||||||||||| ||| || |||||||||||||||||| ||||||||||||||||||    
T  9445 agatcgcaaaatcctaaacaaggcttctgaaatgggacaactcgcgaggcgagaggctctactcgccatggcga 9518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 243
Target Start/End: Complemental strand, 32836 - 32617
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| ||||||||||||||| |||||||||||||||| ||||||||||||| | ||||||   ||||  |||||||||||| ||| |||| |||||  |    
T  32836 aaggttcaactcttaacaattggtgcgacacagatcgcaaaatcctaacaagacattctgtttatgggtcactcgcgaggcgggagcctctcctcgctgt 32737  T
Q  125 ggcgaattcaggt-cagcttcgaaaaagttcattct-taattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagac 222  Q
    ||||| ||  ||| || | ||  |||| ||||||||  |||   | |||| ||||||| | |||  |||| | ||||| ||||| ||||||| |||||||    
T  32736 ggcgagttagggtgcaac-tcacaaaaattcattctaaaatctttacaggttcaatctcattctccagtccttcctaatcattattagacatgttcagac 32638  T
Q  223 actcaaaagcatctaaggttc 243  Q
    |||||||||||||||||||||    
T  32637 actcaaaagcatctaaggttc 32617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 243
Target Start/End: Original strand, 46169 - 46388
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| ||||||||||||||| |||||||||||||||| ||||||||||||| | ||||||   ||||  |||||||||||| ||| |||| |||||  |    
T  46169 aaggttcaactcttaacaattggtgcgacacagatcgcaaaatcctaacaagacattctgtttatgggtcactcgcgaggcgggagcctctcctcgctgt 46268  T
Q  125 ggcgaattcaggt-cagcttcgaaaaagttcattct-taattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagac 222  Q
    ||||| ||  ||| || | ||  |||| ||||||||  |||   | |||| ||||||| | |||  |||| | ||||| ||||| ||||||| |||||||    
T  46269 ggcgagttagggtgcaac-tcacaaaaattcattctaaaatctttacaggttcaatctcattctccagtccttcctaatcattattagacatgttcagac 46367  T
Q  223 actcaaaagcatctaaggttc 243  Q
    |||||||||||||||||||||    
T  46368 actcaaaagcatctaaggttc 46388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 137
Target Start/End: Original strand, 225627 - 225763
Alignment:
Q  2 atatataatattcataactatcctaaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgc 100  Q
    ||||||||| |||||||||| || ||||| ||||||| ||||| |||||||||| ||||||| ||||||||| ||||  |||||||| |  | |||||||    
T  225627 atatataatcttcataactaccccaaggttcaactctcaacaactcgtgcgacaaagatcgcaaaatcctaaacaagcattctgtaactatgtaactcgc 225726  T
Q  101 gaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    ||||| || | ||||||| |  ||||||| |||||||    
T  225727 gaggcaagggcctctacttgttatggcgatttcaggt 225763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 240
Target Start/End: Original strand, 4751 - 4968
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggcttc-tgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| ||||||||||||| | ||||||||| |||||| |||||||||| |||   | |||   ||||  |||||||| ||||||| |||| ||||||||    
T  4751 aaggttcaactcttaacaacttgtgcgacactgatcgcaaaatcctaactaggtaccctgtttctgggtcactcgcgaagcgagagcctctgctcgccat 4850  T
Q  125 ggcgaattcaggtcagcttcgaaaaagttcattct--taattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagac 222  Q
    ||||| |||||||||| |||  |||  ||||||||   |||   |||||| ||||||| | |||  | ||||  |||| ||||| ||||||| ||||| |    
T  4851 ggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattctacattcttttctaatcattattagacatgttcaggc 4950  T
Q  223 actcaaaagcatctaagg 240  Q
    ||||||||||||||||||    
T  4951 actcaaaagcatctaagg 4968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 240
Target Start/End: Original strand, 12333 - 12550
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggcttc-tgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| ||||||||||||| | ||||||||| |||||| |||||||||| |||   | |||   ||||  |||||||| ||||||| |||| ||||||||    
T  12333 aaggttcaactcttaacaacttgtgcgacactgatcgcaaaatcctaactaggtaccctgtttctgggtcactcgcgaagcgagagcctctgctcgccat 12432  T
Q  125 ggcgaattcaggtcagcttcgaaaaagttcattct--taattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagac 222  Q
    ||||| |||||||||| |||  |||  ||||||||   |||   |||||| ||||||| | |||  | ||||  |||| ||||| ||||||| ||||| |    
T  12433 ggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattctacattcttttctaatcattattagacatgttcaggc 12532  T
Q  223 actcaaaagcatctaagg 240  Q
    ||||||||||||||||||    
T  12533 actcaaaagcatctaagg 12550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 240
Target Start/End: Original strand, 22285 - 22502
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggcttc-tgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| ||||||||||||| | ||||||||| |||||| |||||||||| |||   | |||   ||||  |||||||| ||||||| |||| ||||||||    
T  22285 aaggttcaactcttaacaacttgtgcgacactgatcgcaaaatcctaactaggtaccctgtttctgggtcactcgcgaagcgagagcctctgctcgccat 22384  T
Q  125 ggcgaattcaggtcagcttcgaaaaagttcattct--taattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagac 222  Q
    ||||| |||||||||| |||  |||  ||||||||   |||   |||||| ||||||| | |||  | ||||  |||| ||||| ||||||| ||||| |    
T  22385 ggcgagttcaggtcagattcccaaagtttcattctaaaaatctttccaggttcaatctcattctacattcttttctaatcattattagacatgttcaggc 22484  T
Q  223 actcaaaagcatctaagg 240  Q
    ||||||||||||||||||    
T  22485 actcaaaagcatctaagg 22502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 2128 - 2201
Alignment:
Q  57 agatcgcgaaatcctaa-caaggcttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcga 129  Q
    ||||||| ||||||||| ||||| |||||||||||| |||||| ||||||||||| || |||||||||||||||    
T  2128 agatcgcaaaatcctaaacaaggtttctgtaattggacaactcacgaggcgagagcctttactcgccatggcga 2201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 95 - 240
Target Start/End: Original strand, 39074 - 39219
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattcttaattaatccaggctcaatcttaatctgaagtctt 194  Q
    |||||||||||||||| |||| |||||| |||||| ||||||||||  || | ||  |||||||  |||   |||||| ||||||| | |||  | ||||    
T  39074 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccacaagtttcattcaaaatctttccaggttcaatctcattctacattctt 39173  T
Q  195 gcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
     ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  39174 tcctaatcattattagacatgttcaggcactcaaaagcatctaagg 39219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 240
Target Start/End: Original strand, 20424 - 20572
Alignment:
Q  93 caactcgcgaggcgagagtctctactcgccatggcgaattcaggtcagct-tcgaaaaagttcattcttaattaatccaggctcaatcttaatctgaagt 191  Q
    |||||||||||||||||| |||| |||| | ||||||  |||||||||   || ||||  |||||||| |||   |||||| ||||||||| |||  | |    
T  20424 caactcgcgaggcgagagcctctgctcgtcgtggcgagctcaggtcagaactccaaaagtttcattctaaatctttccaggttcaatcttattctacatt 20523  T
Q  192 cttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    ||| ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  20524 ctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 20572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 26 - 140
Target Start/End: Original strand, 28074 - 28189
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| ||||||||||||| | ||||||||||||| || ||||||| |||||||  |||||   ||||  |||||||||||||||| || | |||||| |    
T  28074 aaggttcaactcttaacaacttgtgcgacacagattgcaaaatcctgacaaggcactctgtttctgggtcactcgcgaggcgagagcctttgctcgccgt 28173  T
Q  125 ggcgaattcaggtcag 140  Q
    ||||| ||||||||||    
T  28174 ggcgagttcaggtcag 28189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 95 - 240
Target Start/End: Original strand, 656 - 802
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattcttaatt-aatccaggctcaatcttaatctgaagtct 193  Q
    |||||||||||||||| |||||||||||  ||||| ||||| |||| ||| ||||  |||||||| ||||   || ||| ||||||| | |||  | |||    
T  656 actcgcgaggcgagagcctctactcgccgcggcgagttcagttcagattccaaaagtttcattctaaattctttctaggttcaatctcattctacattct 755  T
Q  194 tgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    |  |||| ||||| ||||||| ||||| |||||||||||||||||||    
T  756 tttctaatcattattagacatgttcaggcactcaaaagcatctaagg 802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 238
Target Start/End: Original strand, 3783 - 3928
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttc-attctt-aattaatccaggctcaatcttaatctgaagtc 192  Q
    |||||||||||||||| |||| |||||| |||||| ||||||||||  ||  | |||||  |||||  ||| | |||||| ||||||| |  ||  | ||    
T  3783 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttgattctacaatcattccaggttcaatctcatcctacattc 3882  T
Q  193 ttgcctaaccattactagacatcttcagacactcaaaagcatctaa 238  Q
    || ||||| ||||| ||||||| |||||||||||||||||||||||    
T  3883 tttcctaatcattattagacatgttcagacactcaaaagcatctaa 3928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0475 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 9375 - 9432
Alignment:
Q  80 ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    |||||||| |||| | ||||||||||||||| |||||||||||||||||| |||||||    
T  9375 ttctgtaaatgggtagctcgcgaggcgagagcctctactcgccatggcgagttcaggt 9432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 10407 - 10460
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggc 79  Q
    ||||| ||||||||||||| | |||||||||||||||| |||||||||||||||    
T  10407 aaggttcaactcttaacaacttgtgcgacacagatcgcaaaatcctaacaaggc 10460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 1618 - 1562
Alignment:
Q  80 ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcagg 136  Q
    ||||||||||||||| ||| ||||||||||| |||||||||| ||||||| ||||||    
T  1618 ttctgtaattgggcatctcacgaggcgagagcctctactcgctatggcgagttcagg 1562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 238
Target Start/End: Original strand, 12369 - 12453
Alignment:
Q  154 cattcttaattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagacactcaaaagcatctaa 238  Q
    ||||||||| || |||||| ||||||| ||||| || |||| ||||| ||||| || |||| ||||||||||||||| |||||||    
T  12369 cattcttaactattccaggttcaatctcaatctaaaatctttcctaatcattattatacatgttcagacactcaaaatcatctaa 12453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 69 - 136
Target Start/End: Complemental strand, 7909 - 7841
Alignment:
Q  69 cctaacaaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcagg 136  Q
    ||||||||||| || ||||| |||||||||||||||||||||| || ||||||| ||||||| ||||||    
T  7909 cctaacaaggcattttgtaactgggcaactcgcgaggcgagagcctttactcgctatggcgagttcagg 7841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 28990 - 28937
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  28990 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 28937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 240
Target Start/End: Complemental strand, 25942 - 25726
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggct-tctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| || |||||| ||| |||||| ||| || |||| |||||||||||||||  |||||   ||||  |||||||||||||||| |||| |||||| |    
T  25942 aaggttcagctcttagcaactcgtgcaacaaaggtcgcaaaatcctaacaaggcactctgtttctgggtcactcgcgaggcgagagcctctgctcgccgt 25843  T
Q  125 ggcgaattcaggtcagcttcgaaaaagttcattct-taattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagaca 223  Q
    ||||| |||||||||| ||   |||| ||||||||  |||   | |||| ||||||| |  ||  | |||| ||||| ||||| ||||||| ||||| ||    
T  25842 ggcgagttcaggtcagatttccaaaaattcattctacaatcttttcaggttcaatctcatcctacattctttcctaatcattattagacatgttcaggca 25743  T
Q  224 ctcaaaagcatctaagg 240  Q
    ||||||| |||||||||    
T  25742 ctcaaaaccatctaagg 25726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 95 - 159
Target Start/End: Original strand, 40226 - 40290
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattct 159  Q
    |||||||||||||||| ||||||||||| |||||| |||||||||| ||   |||||||||||||    
T  40226 actcgcgaggcgagagcctctactcgccgtggcgagttcaggtcagatttccaaaagttcattct 40290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 19705 - 19649
Alignment:
Q  80 ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcagg 136  Q
    |||||||| |||||||||| ||||||||||| |||||||| | ||||||| ||||||    
T  19705 ttctgtaactgggcaactcacgaggcgagagcctctactccctatggcgagttcagg 19649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 47391 - 47439
Alignment:
Q  196 cctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    ||||| ||||| ||||||| |||||||||||||||||||||||||||||    
T  47391 cctaatcattattagacatattcagacactcaaaagcatctaaggttca 47439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 60535 - 60479
Alignment:
Q  80 ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcagg 136  Q
    |||||||| |||| ||||||||||||||||| |||||||||| ||||||| ||||||    
T  60535 ttctgtaactgggaaactcgcgaggcgagagcctctactcgctatggcgagttcagg 60479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 242354 - 242387
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||||||||||||| |||||||||||||||||    
T  242354 ctcgcgaggcgagagtatctactcgccatggcga 242387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 240
Target Start/End: Complemental strand, 28616 - 28470
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcagg-tcagcttcgaaaaagttcattcttaattaatc-caggctcaatcttaatctgaagtc 192  Q
    |||||||||||||||| |||| ||||||||||||| |||||| |||| |||  |||| |||||||| || |  ||  ||| ||||||| | |||  | ||    
T  28616 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcag-ttcacaaaatttcattctaaagtcttcgtaggttcaatctcattctccaatc 28518  T
Q  193 ttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    || ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  28517 tttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 28470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 240
Target Start/End: Original strand, 132967 - 133113
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcagg-tcagcttcgaaaaagttcattcttaa-ttaatccaggctcaatcttaatctgaagtc 192  Q
    |||||||||||||||| |||| ||||||||||||| |||||| |||| |||  |||| |||||||| || |   |||||| ||||||| | |||  | ||    
T  132967 actcgcgaggcgagagcctctgctcgccatggcgagttcaggttcag-ttcacaaaatttcattctaaagtctttccaggttcaatctcattctccaatc 133065  T
Q  193 ttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    || ||||| ||||| ||||||| ||||| ||||||||| |||||||||    
T  133066 tttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 133113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 95 - 137
Target Start/End: Complemental strand, 2609 - 2567
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    |||||||||||||||| |||||||||||||||||| |||||||    
T  2609 actcgcgaggcgagagcctctactcgccatggcgagttcaggt 2567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 240
Target Start/End: Original strand, 7126 - 7271
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcgaattcagg-tcagcttcgaaaaagttcattct-taattaatccaggctcaatcttaatctgaagtct 193  Q
    ||||| ||||||||| |||||||||||||||||| |||||| |||| |||  |||| ||||||||  |||   |||||| ||||||| | |||  | |||    
T  7126 ctcgcaaggcgagagcctctactcgccatggcgagttcaggttcag-ttcacaaaaattcattctaaaatctttccaggttcaatctcattctccaatct 7224  T
Q  194 tgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    | ||||| ||||| ||||||| ||||| ||||||||| |||||||||    
T  7225 ttcctaatcattattagacatgttcaggcactcaaaaacatctaagg 7271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 244
Target Start/End: Original strand, 8318 - 8480
Alignment:
Q  83 tgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggt-cagcttcgaaaaagttcattctt-aattaatccaggctcaatct 180  Q
    ||||| ||| |||||||||||||||| | ||| |||||||||||||| |||||||  | || | ||||| | ||||||| || || |||||| |||||||    
T  8318 tgtaactggacaactcgcgaggcgagggcctccactcgccatggcgagttcaggtgtaactcccaaaaa-tccattcttaaactattccaggttcaatct 8416  T
Q  181 taatctgaagtcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
     |||||  | ||||  |||| ||||| || |||| ||||||||| ||||| ||| |||||||||    
T  8417 caatctagaatcttttctaatcattattacacatattcagacacccaaaaacatttaaggttca 8480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 240
Target Start/End: Original strand, 20717 - 20863
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagtt-cattct-taattaatccaggctcaatcttaatctgaagtct 193  Q
    ||||||||||||||| |||| |||||| |||||| ||||||||||  ||  | ||||| |||||| ||||   |||||| ||||||| |  ||  | |||    
T  20717 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctataatctttccaggttcaatctcatcctacattct 20816  T
Q  194 tgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    | ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  20817 ttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 20863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 32826 - 32892
Alignment:
Q  72 aacaaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    |||||||| |||||||| |||| | ||||||||||||| | |||||||||||||||||| |||||||    
T  32826 aacaaggcattctgtaactgggtagctcgcgaggcgagggcctctactcgccatggcgagttcaggt 32892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 429 - 486
Alignment:
Q  80 ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    |||||||| ||||  |||||||||||||||| |||| ||||||||||||| |||||||    
T  429 ttctgtaactgggtcactcgcgaggcgagagcctctgctcgccatggcgagttcaggt 486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 770 - 717
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  770 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 857 - 812
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||||||||||||| |||| |||||| |||||| ||||||||||    
T  857 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcag 812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 2795 - 2742
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  2795 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 2742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 773 - 720
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  773 tctttcctaatcattattagacatattcaggcactcaaaagcatctaaggttca 720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 860 - 815
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||||||||||||| |||| |||||| |||||| ||||||||||    
T  860 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcag 815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 10147 - 10094
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  10147 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 10094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 5248 - 5301
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||||||||  |||||||||||||||||||||||    
T  5248 tctttcctaatcattattagacatcttcatgcactcaaaagcatctaaggttca 5301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 5161 - 5206
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    ||||||||||| |||| ||||||||||| |||||| ||||||||||    
T  5161 actcgcgaggcaagagcctctactcgccgtggcgagttcaggtcag 5206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 13318 - 13265
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  13318 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 13265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 34; Significance: 0.0000000003; HSPs: 4)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 336 - 389
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  336 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 5112 - 5165
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  5112 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 5165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 253 - 294
Alignment:
Q  99 gcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||||||||| |||| ||||||||||||| ||||||||||    
T  253 gcgaggcgagagcctctgctcgccatggcgagttcaggtcag 294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 5029 - 5070
Alignment:
Q  99 gcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||||||||| |||| ||||||||||||| ||||||||||    
T  5029 gcgaggcgagagcctctgctcgccatggcgagttcaggtcag 5070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 16679 - 16732
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  16679 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 16732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Original strand, 34531 - 34584
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  34531 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 34584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 13405 - 13450
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||||||||||||| |||| |||||| |||||| ||||||||||    
T  13405 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcag 13450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 2155 - 2102
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  2155 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 2102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 45596 - 45555
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    ||||||||||||||| |||||||||||||||||| |||||||    
T  45596 ctcgcgaggcgagagcctctactcgccatggcgagttcaggt 45555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 244
Target Start/End: Original strand, 4767 - 4987
Alignment:
Q  26 aaggtccaactcttaacaattcgtgcgacacagatcgcgaaatcctaacaaggc-ttctgtaattgggcaactcgcgaggcgagagtctctactcgccat 124  Q
    ||||| ||||||||||||| |||||| ||| || |||| ||||||||||| ||| ||||||   |||| | || |||||||||||| || | ||||||||    
T  4767 aaggttcaactcttaacaactcgtgcaacaaaggtcgcaaaatcctaacatggcattctgtttctgggtagcttgcgaggcgagagcctttgctcgccat 4866  T
Q  125 ggcgaattcaggtcagcttcga-aaaagttcattct-taattaatccaggctcaatcttaatctgaagtcttgcctaaccattactagacatcttcagac 222  Q
    |||||   |||||| |  |||| |||||||||||||  |||   | |||| ||||||| | |||  | |||| ||||  ||||| ||||||| || || |    
T  4867 ggcgaggacaggtctg-atcgacaaaagttcattctaaaatcttttcaggttcaatctcattctacaatcttccctagtcattaatagacatgtttaggc 4965  T
Q  223 actcaaaagcatctaaggttca 244  Q
    ||||||||||||||||||||||    
T  4966 actcaaaagcatctaaggttca 4987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000003; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 167700 - 167647
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  167700 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 167647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 240
Target Start/End: Original strand, 52225 - 52372
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaag-ttcattct-taattaatccaggctcaatcttaatctgaagtc 192  Q
    |||||||||||||||| |||| |||||| |||||| ||||||||||  ||  | ||| ||||||||  |||   |||||| ||||||| |  ||  | ||    
T  52225 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattc 52324  T
Q  193 ttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    || ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  52325 tttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 52372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 167787 - 167742
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||||||||||||| |||| |||||| |||||| ||||||||||    
T  167787 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcag 167742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 244
Target Start/End: Complemental strand, 7865 - 7714
Alignment:
Q  94 aactcgcgaggcgagagtctctactcgccatggcgaattcaggt-cagcttcgaaaaagttcattctt-aattaatccaggctcaatcttaatctgaagt 191  Q
    ||||||||||||||||| |||||||||| ||||||| |||||||  | |  | ||||| ||||||||| || || || ||| ||||||| | |||    |    
T  7865 aactcgcgaggcgagagcctctactcgctatggcgagttcaggtgtaacccccaaaaa-ttcattcttaaactattctaggttcaatctcagtctaggat 7767  T
Q  192 cttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    ||| ||||| ||||| || |||| ||||||||||||||| |||||||||||||    
T  7766 ctttcctaatcattattacacatgttcagacactcaaaaacatctaaggttca 7714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 13900 - 13948
Alignment:
Q  196 cctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    ||||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  13900 cctaatcattattagacatgttcaggcactcaaaagcatctaaggttca 13948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 33; Significance: 0.000000001; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 136188 - 136132
Alignment:
Q  80 ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcagg 136  Q
    |||| ||| ||| |||||||||||||||||| |||||||||| ||||||| ||||||    
T  136188 ttctataaatggacaactcgcgaggcgagagcctctactcgctatggcgagttcagg 136132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 136
Target Start/End: Complemental strand, 144896 - 144840
Alignment:
Q  80 ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcagg 136  Q
    |||| ||| ||| |||||||||||||||||| |||||||||| ||||||| ||||||    
T  144896 ttctataaatggacaactcgcgaggcgagagcctctactcgctatggcgagttcagg 144840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 124898 - 124943
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||||||||||||| |||| |||||| |||||| ||||||||||    
T  124898 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcag 124943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 124993 - 125042
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  124993 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 125042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 339758 - 339694
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaagttcattct 159  Q
    |||||||||||||||| |||| |||||| |||||| |||| ||||| |||  |||||||||||||    
T  339758 actcgcgaggcgagagcctctgctcgccgtggcgagttcatgtcagattcccaaaagttcattct 339694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 240
Target Start/End: Complemental strand, 770 - 623
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcagctt-cgaaaaagtt-cattcttaattaatccaggctcaatcttaatctgaagtc 192  Q
    |||| ||||||| ||  |||| ||||||||||||| |||||||||| || | || ||||| ||||||  | ||| ||||| |||||||   |||  | ||    
T  770 actcacgaggcgggaacctctgctcgccatggcgagttcaggtcagatttccaacaagtttcattctctactaaaccaggttcaatctcgttctacaatc 671  T
Q  193 ttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    || ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  670 tttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 242
Target Start/End: Complemental strand, 17718 - 17667
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggtt 242  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||    
T  17718 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaaggtt 17667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 137
Target Start/End: Original strand, 10841 - 10884
Alignment:
Q  94 aactcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    ||||||||||||||||| |||||||||| ||||||| |||||||    
T  10841 aactcgcgaggcgagagcctctactcgctatggcgagttcaggt 10884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 240
Target Start/End: Original strand, 2164 - 2311
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcagcttcgaaaaag-ttcattct-taattaatccaggctcaatcttaatctgaagtc 192  Q
    ||||| ||||||| || |||||||||||||||||| ||||||||||  ||  | ||| ||||||||  |||   |||||| ||||||| |  ||  | ||    
T  2164 actcgtgaggcgatagcctctactcgccatggcgagttcaggtcagaatcccacaagtttcattctacaatctttccaggttcaatctcatcctacattc 2263  T
Q  193 ttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    || ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  2264 tttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 2311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 141
Target Start/End: Original strand, 2265 - 2311
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcagc 141  Q
    |||||||||||||||| |||| |||||| |||||| |||||||||||    
T  2265 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagc 2311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 141
Target Start/End: Original strand, 6923 - 6969
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcagc 141  Q
    |||||||||||||||| |||| |||||| |||||| |||||||||||    
T  6923 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagc 6969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 10474 - 10512
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcgaattca 134  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  10474 ctcgcgaggcgagagtatctactcgccatggcgagttca 10512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0233 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 14349 - 14311
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcgaattca 134  Q
    |||||||||||||||| ||||||||||||||||| ||||    
T  14349 ctcgcgaggcgagagtatctactcgccatggcgagttca 14311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 244
Target Start/End: Original strand, 32475 - 32517
Alignment:
Q  202 cattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    ||||| ||||||| ||||| |||||||||||||||||||||||    
T  32475 cattattagacatgttcaggcactcaaaagcatctaaggttca 32517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 4852 - 4799
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||| ||||||||||||||    
T  4852 tctttcctaatcattattagacatgttcaggcactcaaaggcatctaaggttca 4799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 5831 - 5782
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  5831 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 5782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 203 - 244
Target Start/End: Complemental strand, 10970 - 10929
Alignment:
Q  203 attactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||||| ||||| |||||||||||||||||||||||    
T  10970 attattagacatgttcaggcactcaaaagcatctaaggttca 10929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Complemental strand, 18668 - 18619
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  18668 tctttcctaatcattattagacatgttcaggcactcaaaagcatctaagg 18619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 16069 - 16118
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaagg 240  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||||||||||||    
T  16069 tctttcctaatcattattagacatattcaggcactcaaaagcatctaagg 16118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 244
Target Start/End: Complemental strand, 11234 - 11181
Alignment:
Q  191 tcttgcctaaccattactagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||| ||||| ||||| ||||||| ||||| |||||||||| ||||||||||||    
T  11234 tctttcctaatcattattagacatgttcaggcactcaaaagaatctaaggttca 11181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 13524 - 13569
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    |||||||||||||||| |||| |||||| |||||| ||||||||||    
T  13524 actcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcag 13569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 3794 - 3839
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    ||||||||| |||||| |||| ||||||||||||| ||||||||||    
T  3794 actcgcgagacgagagcctctgctcgccatggcgagttcaggtcag 3839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 7858 - 7903
Alignment:
Q  95 actcgcgaggcgagagtctctactcgccatggcgaattcaggtcag 140  Q
    ||||||||| |||||| |||| ||||||||||||| ||||||||||    
T  7858 actcgcgagacgagagcctctgctcgccatggcgagttcaggtcag 7903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 137
Target Start/End: Original strand, 19565 - 19622
Alignment:
Q  80 ttctgtaattgggcaactcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    |||||||| ||||  | |||||||||||||| |||| ||||||||||||| |||||||    
T  19565 ttctgtaactgggtcattcgcgaggcgagagcctctgctcgccatggcgagttcaggt 19622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 211 - 244
Target Start/End: Complemental strand, 48151 - 48118
Alignment:
Q  211 acatcttcagacactcaaaagcatctaaggttca 244  Q
    |||||||||||||||||||| |||||||||||||    
T  48151 acatcttcagacactcaaaaacatctaaggttca 48118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 129
Target Start/End: Original strand, 9637 - 9670
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||||||||||||| |||||||||||||||||    
T  9637 ctcgcgaggcgagagtatctactcgccatggcga 9670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 58227 - 58194
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcga 129  Q
    |||||||||||||||| |||||||||||||||||    
T  58227 ctcgcgaggcgagagtatctactcgccatggcga 58194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 137
Target Start/End: Complemental strand, 10349 - 10305
Alignment:
Q  93 caactcgcgaggcgagagtctctactcgccatggcgaattcaggt 137  Q
    |||||||||||||||||| ||||||||||  |||||| |||||||    
T  10349 caactcgcgaggcgagagcctctactcgctttggcgagttcaggt 10305  T

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Target: scaffold0367 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 244
Target Start/End: Original strand, 1318 - 1354
Alignment:
Q  208 tagacatcttcagacactcaaaagcatctaaggttca 244  Q
    |||||||||| || |||||||||||||||||||||||    
T  1318 tagacatcttaaggcactcaaaagcatctaaggttca 1354  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Complemental strand, 128775 - 128735
Alignment:
Q  96 ctcgcgaggcgagagtctctactcgccatggcgaattcagg 136  Q
    ||||||||||||||| |||||||||| ||||||| ||||||    
T  128775 ctcgcgaggcgagagcctctactcgctatggcgagttcagg 128735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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