View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3471_high_40 (Length: 264)
Name: NF3471_high_40
Description: NF3471
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3471_high_40 |
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Alignment Details
Target: chr5 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 6071880 - 6072043
Alignment:
| Q |
1 |
tccttttctagtaatgtttctgtgttcgatattgtattcatatgtctctttgcatttttctatctacctagccttttcttaattctgagatctatagctt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6071880 |
tccttttctagtaatgtttctgtgttcgatattgtattcatatgtctctttgcatttttctatctacctagccttttcttaattctgagatctatagctt |
6071979 |
T |
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| Q |
101 |
gactattcatgtgtaacttgagcagtcactcttctcacagtctgtcctatgtcccactccaatc |
164 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6071980 |
gactattcatgtgtaacttgagcagtcactcttctcacagtctgtcctatgtcccactccaatc |
6072043 |
T |
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