View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3471_high_73 (Length: 217)

Name: NF3471_high_73
Description: NF3471
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3471_high_73
NF3471_high_73
[»] chr1 (100 HSPs)
chr1 (71-200)||(11902320-11902449)
chr1 (71-200)||(11879628-11879757)
chr1 (107-200)||(52821075-52821168)
chr1 (89-198)||(11879550-11879659)
chr1 (71-200)||(52821363-52821492)
chr1 (71-192)||(11882390-11882511)
chr1 (71-192)||(11891624-11891745)
chr1 (71-192)||(52818824-52818945)
chr1 (86-198)||(11902239-11902351)
chr1 (75-198)||(11882298-11882421)
chr1 (75-198)||(11891532-11891655)
chr1 (89-195)||(11902194-11902300)
chr1 (71-183)||(11902533-11902645)
chr1 (71-198)||(52821317-52821444)
chr1 (116-200)||(52821123-52821207)
chr1 (71-174)||(52818554-52818657)
chr1 (71-198)||(52818914-52819041)
chr1 (71-146)||(52821225-52821300)
chr1 (71-177)||(11882438-11882544)
chr1 (71-177)||(11891672-11891778)
chr1 (71-192)||(52821227-52821348)
chr1 (71-183)||(11880033-11880145)
chr1 (71-198)||(11882342-11882469)
chr1 (71-198)||(11891576-11891703)
chr1 (71-198)||(52821029-52821156)
chr1 (86-192)||(11879595-11879701)
chr1 (71-200)||(11879937-11880066)
chr1 (71-192)||(11905187-11905308)
chr1 (71-198)||(11879985-11880112)
chr1 (74-189)||(11891819-11891934)
chr1 (113-200)||(11902479-11902566)
chr1 (74-189)||(11905430-11905545)
chr1 (71-198)||(52820981-52821108)
chr1 (125-200)||(52821459-52821534)
chr1 (113-198)||(11879787-11879872)
chr1 (71-180)||(11904899-11905008)
chr1 (77-150)||(52820933-52821006)
chr1 (74-198)||(11882585-11882709)
chr1 (89-177)||(11889795-11889883)
chr1 (86-150)||(11902596-11902660)
chr1 (71-174)||(11891864-11891967)
chr1 (71-150)||(11902677-11902756)
chr1 (119-198)||(11905283-11905362)
chr1 (71-198)||(11905331-11905458)
chr1 (71-174)||(11905475-11905578)
chr1 (71-189)||(11882630-11882748)
chr1 (71-165)||(11882678-11882772)
chr1 (71-177)||(11905283-11905389)
chr1 (89-183)||(52820948-52821042)
chr1 (125-198)||(11879490-11879563)
chr1 (71-180)||(11882102-11882211)
chr1 (71-180)||(11891336-11891445)
chr1 (89-198)||(11902503-11902612)
chr1 (71-200)||(52821267-52821396)
chr1 (86-169)||(11879691-11879774)
chr1 (71-150)||(11879841-11879920)
chr1 (71-150)||(11880177-11880256)
chr1 (71-198)||(11882486-11882613)
chr1 (71-198)||(11889537-11889664)
chr1 (71-146)||(11889633-11889708)
chr1 (115-146)||(11889725-11889756)
chr1 (115-198)||(11889773-11889856)
chr1 (71-198)||(11891720-11891847)
chr1 (81-200)||(52818768-52818887)
chr1 (89-183)||(11879811-11879905)
chr1 (71-177)||(11888193-11888299)
chr1 (71-177)||(11888241-11888347)
chr1 (71-177)||(11888289-11888395)
chr1 (71-177)||(11888337-11888443)
chr1 (71-177)||(11888385-11888491)
chr1 (71-177)||(11888433-11888539)
chr1 (71-177)||(11888481-11888587)
chr1 (71-177)||(11888529-11888635)
chr1 (71-177)||(11888577-11888683)
chr1 (71-177)||(11888625-11888731)
chr1 (71-177)||(11888673-11888779)
chr1 (71-177)||(11888721-11888827)
chr1 (71-177)||(11888769-11888875)
chr1 (71-177)||(11888817-11888923)
chr1 (71-177)||(11888865-11888971)
chr1 (71-177)||(11888913-11889019)
chr1 (71-177)||(11888961-11889067)
chr1 (71-177)||(11889009-11889115)
chr1 (71-177)||(11889057-11889163)
chr1 (71-177)||(11889105-11889211)
chr1 (71-177)||(11889153-11889259)
chr1 (71-177)||(11889201-11889307)
chr1 (71-177)||(11889249-11889355)
chr1 (71-177)||(11889297-11889403)
chr1 (71-177)||(11889345-11889451)
chr1 (71-177)||(11889393-11889499)
chr1 (71-177)||(11889441-11889547)
chr1 (86-192)||(11902287-11902393)
chr1 (74-200)||(52818720-52818846)
chr1 (71-144)||(11904803-11904876)
chr1 (71-168)||(52819088-52819185)
chr1 (113-198)||(52819106-52819191)
chr1 (86-150)||(11880096-11880160)
chr1 (89-189)||(52818587-52818687)
chr1 (92-192)||(52818632-52818732)
[»] scaffold1918 (1 HSPs)
scaffold1918 (80-183)||(1-104)
[»] chr4 (11 HSPs)
chr4 (128-169)||(24477658-24477699)
chr4 (137-200)||(24421250-24421313)
chr4 (98-192)||(24470371-24470465)
chr4 (101-199)||(24477388-24477486)
chr4 (131-192)||(24420634-24420695)
chr4 (137-198)||(24470602-24470663)
chr4 (113-165)||(24482215-24482267)
chr4 (137-180)||(24477503-24477546)
chr4 (86-192)||(24421162-24421268)
chr4 (86-180)||(24470647-24470741)
chr4 (77-169)||(24420609-24420701)
[»] scaffold0879 (2 HSPs)
scaffold0879 (137-200)||(4461-4524)
scaffold0879 (86-192)||(4506-4612)
[»] chr2 (1 HSPs)
chr2 (125-192)||(41900283-41900350)


Alignment Details
Target: chr1 (Bit Score: 118; Significance: 2e-60; HSPs: 100)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 71 - 200
Target Start/End: Original strand, 11902320 - 11902449
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11902320 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccacctcctccatatt 11902419  T
Q  171 actacaagtctcccccaccaccctcaccct 200  Q
    |||||||||||||| ||||||| |||||||    
T  11902420 actacaagtctcccacaccaccttcaccct 11902449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 71 - 200
Target Start/End: Original strand, 11879628 - 11879757
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  11879628 tactactacaaatctcctccaccaccctcaccttccccaccaccaccatactattacaagtctcctccaccaccatctccctcacctccaccaccatatt 11879727  T
Q  171 actacaagtctcccccaccaccctcaccct 200  Q
    ||||||||||||||||||||||||||||||    
T  11879728 actacaagtctcccccaccaccctcaccct 11879757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 107 - 200
Target Start/End: Complemental strand, 52821168 - 52821075
Alignment:
Q  107 cctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattactacaagtctcccccaccaccctcaccct 200  Q
    ||||| ||||| ||||| |||||||||||||||||||| ||||||||||| |||||||| || |||||||||||||||||||||||||||||||    
T  52821168 cctccaccaccttactactacaagtctcctccaccaccctctccctcacctccacctccttactactacaagtctcccccaccaccctcaccct 52821075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 89 - 198
Target Start/End: Original strand, 11879550 - 11879659
Alignment:
Q  89 ccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattactacaagtctcccccac 188  Q
    |||||||||||||||||||| || ||||||||||| ||||||  |||||||||||| ||||| ||||| |||||||| || |||||||| ||||| ||||    
T  11879550 ccaccaccctcaccttccccaccaccaccatactactacaagagtcctccaccaccttctccttcacctccacctccttactactacaaatctcctccac 11879649  T
Q  189 caccctcacc 198  Q
    ||||||||||    
T  11879650 caccctcacc 11879659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 71 - 200
Target Start/End: Complemental strand, 52821492 - 52821363
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||||||||| || ||||||||||| || || ||||| ||||| ||||| |||||||| || |||||||| ||||||||||| |||||||| || |    
T  52821492 tactactataaatctccaccaccaccctctccctcacctccaccaccttactactacaagtccccaccaccaccctctccctcacctccacctccttact 52821393  T
Q  171 actacaagtctcccccaccaccctcaccct 200  Q
    |||||||||| || ||||||||||| ||||    
T  52821392 actacaagtcacctccaccaccctctccct 52821363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 71 - 192
Target Start/End: Original strand, 11882390 - 11882511
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    ||||| || ||||| ||||||||||| ||||| || |||||||| |||||||||||||| ||||||||||||||||| || |||||||||||||| || |    
T  11882390 tactattacaaatcacctccaccaccatcaccatcacctccccctccatactattacaaatctcctccaccaccatcaccatcaccaccacctccttact 11882489  T
Q  171 actacaagtctcccccaccacc 192  Q
    | ||||| || || ||||||||    
T  11882490 attacaaatcacctccaccacc 11882511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 71 - 192
Target Start/End: Original strand, 11891624 - 11891745
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    ||||| || ||||| ||||||||||| ||||| || |||||||| |||||||||||||| ||||||||||||||||| || |||||||||||||| || |    
T  11891624 tactattacaaatcacctccaccaccatcaccatcacctccccctccatactattacaaatctcctccaccaccatcaccatcaccaccacctccttact 11891723  T
Q  171 actacaagtctcccccaccacc 192  Q
    | ||||| || || ||||||||    
T  11891724 attacaaatcacctccaccacc 11891745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 71 - 192
Target Start/End: Complemental strand, 52818945 - 52818824
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    ||||| |||||||| ||||||||||||||||| ||||| || ||||| ||||||||| | || |||||||||||||| || || ||||||||||| ||||    
T  52818945 tactattataaatctcctccaccaccctcaccatccccacctccaccgtactattaccaatcccctccaccaccatcaccatctccaccacctccttatt 52818846  T
Q  171 actacaagtctcccccaccacc 192  Q
    ||||||| || || ||||||||    
T  52818845 actacaaatcacctccaccacc 52818824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 86 - 198
Target Start/End: Original strand, 11902239 - 11902351
Alignment:
Q  86 cctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattactacaagtctcccc 185  Q
    |||||||||||||| |||||||| || ||||||||||||||||||  |||||||||||| ||||| ||||| |||||||| || ||||| || || || |    
T  11902239 cctccaccaccctcgccttccccaccgccaccatactattacaagagtcctccaccaccctctccttcacctccacctccttactactataaatcgcctc 11902338  T
Q  186 caccaccctcacc 198  Q
    |||||||||||||    
T  11902339 caccaccctcacc 11902351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 75 - 198
Target Start/End: Original strand, 11882298 - 11882421
Alignment:
Q  75 actataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattacta 174  Q
    ||||||| || || || ||||| ||||| ||||||||||| |||||||||||||| ||||||||||||||||| || |||||||||||||| || || ||    
T  11882298 actataagtcaccacccccaccatcaccatcccctccccctccatactattacaaatctcctccaccaccatcaccatcaccaccacctccctactatta 11882397  T
Q  175 caagtctcccccaccaccctcacc 198  Q
    ||| || || |||||||| |||||    
T  11882398 caaatcacctccaccaccatcacc 11882421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 75 - 198
Target Start/End: Original strand, 11891532 - 11891655
Alignment:
Q  75 actataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattacta 174  Q
    ||||||| || || || ||||| ||||| ||||||||||| |||||||||||||| ||||||||||||||||| || |||||||||||||| || || ||    
T  11891532 actataagtcaccacccccaccatcaccatcccctccccctccatactattacaaatctcctccaccaccatcaccatcaccaccacctccctactatta 11891631  T
Q  175 caagtctcccccaccaccctcacc 198  Q
    ||| || || |||||||| |||||    
T  11891632 caaatcacctccaccaccatcacc 11891655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 89 - 195
Target Start/End: Original strand, 11902194 - 11902300
Alignment:
Q  89 ccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattactacaagtctcccccac 188  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| || || || ||||| || ||||| || ||||||  ||| ||||    
T  11902194 ccaccaccctcgccttccccgcccccaccatactattacaagtctcctccaccaccctcgccttccccaccgccaccatactattacaagagtcctccac 11902293  T
Q  189 caccctc 195  Q
    |||||||    
T  11902294 caccctc 11902300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 11902533 - 11902645
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||||||||| || |||||||||||||| || || |||||||| |||||||||||||||||||||||||| || || || || ||||| ||||| |    
T  11902533 tactactataaatctcccccaccaccctcaccctctccacccccaccttactattacaagtctcctccaccaccttcaccatctcctccaccaccatact 11902632  T
Q  171 actacaagtctcc 183  Q
    | ||||| |||||    
T  11902633 attacaaatctcc 11902645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 71 - 198
Target Start/End: Complemental strand, 52821444 - 52821317
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| || || || ||||||||||| || || ||||| || || ||||| |||||||| ||||||||||| ||||||||||| |||||||| || |    
T  52821444 tactactacaagtccccaccaccaccctctccctcacctccacctccttactactacaagtcacctccaccaccctctccctcacctccacctccttact 52821345  T
Q  171 actacaagtctcccccaccaccctcacc 198  Q
    |||||||||| || |||||||| |||||    
T  52821344 actacaagtcacctccaccaccttcacc 52821317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 116 - 200
Target Start/End: Complemental strand, 52821207 - 52821123
Alignment:
Q  116 ccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattactacaagtctcccccaccaccctcaccct 200  Q
    |||||||||||||||||||| || ||||| ||||||||||| ||||| || || |||||||||||||| ||||||||||| ||||    
T  52821207 ccatactattacaagtctccccctccaccttctccctcacctccaccaccttactactacaagtctcctccaccaccctctccct 52821123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 71 - 174
Target Start/End: Complemental strand, 52818657 - 52818554
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| ||||||||||| || || || ||||| || || |||||||||||||| |||||||| |||||||| || ||||||||||| ||||    
T  52818657 tactactacaaatcacctccaccaccatccccgtcacctccacctccttactattacaagtcacctccacctccatctccatctccaccacctccttatt 52818558  T
Q  171 acta 174  Q
    ||||    
T  52818557 acta 52818554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 71 - 198
Target Start/End: Complemental strand, 52819041 - 52818914
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    ||||||||||| || || |||||||| ||||| |||||||| |||||||||||||| ||||| || || |||||||| || || || || |||||||| |    
T  52819041 tactactataagtcaccaccaccaccatcaccatcccctcctccaccatactattataagtcaccacctccaccatcaccatcccctccccctccatact 52818942  T
Q  171 actacaagtctcccccaccaccctcacc 198  Q
    | || || ||||| ||||||||||||||    
T  52818941 attataaatctcctccaccaccctcacc 52818914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 71 - 146
Target Start/End: Complemental strand, 52821300 - 52821225
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccat 146  Q
    |||||||||||||| ||||| |||||||| || |||||||| ||||| ||||||||||||||||| ||||||||||    
T  52821300 tactactataaatctcctcctccaccctctccctcccctcctccaccttactattacaagtctcccccaccaccat 52821225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11882438 - 11882544
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    ||||| || ||||| ||||||||||| ||||| || || || || || ||||||||||| || |||||||||||||| || ||||||||||||||||| |    
T  11882438 tactattacaaatctcctccaccaccatcaccatcaccaccacctccttactattacaaatcacctccaccaccatccccatcaccaccacctccatact 11882537  T
Q  171 actacaa 177  Q
    |||||||    
T  11882538 actacaa 11882544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11891672 - 11891778
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    ||||| || ||||| ||||||||||| ||||| || || || || || ||||||||||| || |||||||||||||| || ||||||||||||||||| |    
T  11891672 tactattacaaatctcctccaccaccatcaccatcaccaccacctccttactattacaaatcacctccaccaccatccccatcaccaccacctccatact 11891771  T
Q  171 actacaa 177  Q
    |||||||    
T  11891772 actacaa 11891778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 192
Target Start/End: Complemental strand, 52821348 - 52821227
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| || || ||||||||||| |||||||| ||||| ||||| ||||| || || |||||||| ||||| |||||||| || || || || || |    
T  52821348 tactactacaagtcacctccaccaccttcaccttcacctcctccaccttactactataaatctcctcctccaccctctccctcccctcctccaccttact 52821249  T
Q  171 actacaagtctcccccaccacc 192  Q
    | ||||||||||||||||||||    
T  52821248 attacaagtctcccccaccacc 52821227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 71 - 183
Target Start/End: Original strand, 11880033 - 11880145
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||||||||| || |||||||| ||||| || || || ||||| |||||||||||||||||||| ||||| || || || || ||||| ||||| |    
T  11880033 tactactataaatctcccccaccaccgtcaccctctccaccaccaccttactattacaagtctcctcccccaccttcaccatctcctccaccaccatact 11880132  T
Q  171 actacaagtctcc 183  Q
    ||||||| |||||    
T  11880133 actacaaatctcc 11880145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 198
Target Start/End: Original strand, 11882342 - 11882469
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    ||||| || ||||| ||||||||||| ||||| || || || || || ||||||||||| || |||||||||||||| || ||||| || |||||||| |    
T  11882342 tactattacaaatctcctccaccaccatcaccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcacctccccctccatact 11882441  T
Q  171 actacaagtctcccccaccaccctcacc 198  Q
    | ||||| ||||| |||||||| |||||    
T  11882442 attacaaatctcctccaccaccatcacc 11882469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 198
Target Start/End: Original strand, 11891576 - 11891703
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    ||||| || ||||| ||||||||||| ||||| || || || || || ||||||||||| || |||||||||||||| || ||||| || |||||||| |    
T  11891576 tactattacaaatctcctccaccaccatcaccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcacctccccctccatact 11891675  T
Q  171 actacaagtctcccccaccaccctcacc 198  Q
    | ||||| ||||| |||||||| |||||    
T  11891676 attacaaatctcctccaccaccatcacc 11891703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 71 - 198
Target Start/End: Complemental strand, 52821156 - 52821029
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| || || |||||||||||||| || || ||||| || || ||||| ||||||||||| |||||||| || ||||| || || ||||||||||    
T  52821156 tactactacaagtctcctccaccaccctctccctcacctccacctccttactactacaagtctcccccaccaccctcaccctcccctcctcctccatatt 52821057  T
Q  171 actacaagtctcccccaccaccctcacc 198  Q
    | |||||||| || ||||| || |||||    
T  52821056 attacaagtccccaccacctccttcacc 52821029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 11879595 - 11879701
Alignment:
Q  86 cctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattactacaagtctcccc 185  Q
    ||||||||||| || ||||| ||||| || || ||||| ||||| |||||||||||||| || || || |||||||| ||||| || ||||||||||| |    
T  11879595 cctccaccaccttctccttcacctccacctccttactactacaaatctcctccaccaccctcaccttccccaccaccaccatactattacaagtctcctc 11879694  T
Q  186 caccacc 192  Q
    |||||||    
T  11879695 caccacc 11879701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 71 - 200
Target Start/End: Original strand, 11879937 - 11880066
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || ||||| || ||||| || ||||| ||||||||||| ||||| ||||| ||||| || || || || || ||||| ||||| |    
T  11879937 tactactacaaatctcccccacccccttcaccatctcctccaccaccatactactacaaatctcccccacccccttcaccgtctcctccaccaccatact 11880036  T
Q  171 actacaagtctcccccaccaccctcaccct 200  Q
    |||| || |||||||||||||| |||||||    
T  11880037 actataaatctcccccaccaccgtcaccct 11880066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 71 - 192
Target Start/End: Original strand, 11905187 - 11905308
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    ||||| ||||| || || || ||||| ||||| ||||||||||| ||||| |||||||| ||||||||||||||||| || ||||||| || ||| || |    
T  11905187 tactattataagtcaccacccccaccatcaccatcccctccccctccatattattacaaatctcctccaccaccatccccatcaccacaacatccctact 11905286  T
Q  171 actacaagtctcccccaccacc 192  Q
    | ||||| || || ||||||||    
T  11905287 attacaaatcacctccaccacc 11905308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 71 - 198
Target Start/End: Original strand, 11879985 - 11880112
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || ||||| || ||||| || ||||| ||||||||||| || || ||||| |||||||| || ||||| |||||||| || || |    
T  11879985 tactactacaaatctcccccacccccttcaccgtctcctccaccaccatactactataaatctcccccaccaccgtcaccctctccaccaccaccttact 11880084  T
Q  171 actacaagtctcccccaccaccctcacc 198  Q
    | ||||||||||| || ||||| |||||    
T  11880085 attacaagtctcctcccccaccttcacc 11880112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 11891819 - 11891934
Alignment:
Q  74 tactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattact 173  Q
    ||||| ||||| || |||||||| ||||| ||||| ||||| || ||||||||||| || |||||||| || || || ||||| |||||||| || || |    
T  11891819 tactacaaatctccaccaccaccatcaccatccccaccccctccctactattacaaatcacctccacctccctcaccatcaccgccacctccttactatt 11891918  T
Q  174 acaagtctcccccacc 189  Q
    |||| |||||||||||    
T  11891919 acaaatctcccccacc 11891934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 113 - 200
Target Start/End: Original strand, 11902479 - 11902566
Alignment:
Q  113 ccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattactacaagtctcccccaccaccctcaccct 200  Q
    |||||||||||||||||||| || ||||| || || || || || ||||| ||||| ||||| || ||||||||||||||||||||||    
T  11902479 ccaccatactattacaagtccccaccacccccttcaccatctcctccaccaccatactactataaatctcccccaccaccctcaccct 11902566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 11905430 - 11905545
Alignment:
Q  74 tactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattact 173  Q
    ||||| ||||| || |||||||| ||||| || || ||||| || ||||||||||| || ||||||||||| || || ||||| |||||||| || || |    
T  11905430 tactacaaatctccaccaccaccatcaccatcaccaccccctccctactattacaaatcacctccaccaccgtcaccatcaccgccacctccttactatt 11905529  T
Q  174 acaagtctcccccacc 189  Q
    |||| |||||||||||    
T  11905530 acaaatctcccccacc 11905545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 71 - 198
Target Start/End: Complemental strand, 52821108 - 52820981
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| || || || |||||||||||||| |||||||| || ||||| ||||||||||| || ||||| || || || || || ||||| |||||||    
T  52821108 tactactacaagtctcccccaccaccctcaccctcccctcctcctccatattattacaagtccccaccacctccttcaccgtcccctccaccaccatatt 52821009  T
Q  171 actacaagtctcccccaccaccctcacc 198  Q
    | || || ||||| |||||||| |||||    
T  52821008 attataaatctcctccaccaccttcacc 52820981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 125 - 200
Target Start/End: Complemental strand, 52821534 - 52821459
Alignment:
Q  125 tacaagtctcctccaccaccatctccctcaccaccacctccatattactacaagtctcccccaccaccctcaccct 200  Q
    |||||||| || |||||||||||||||||||| |||||||| || ||||| || ||||| ||||||||||| ||||    
T  52821534 tacaagtcacccccaccaccatctccctcacccccacctccttactactataaatctccaccaccaccctctccct 52821459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 198
Target Start/End: Original strand, 11879787 - 11879872
Alignment:
Q  113 ccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattactacaagtctcccccaccaccctcacc 198  Q
    |||||||||||||||||||| || |||||||| || || || || ||||| ||||| |||||||| ||||||||||| || |||||    
T  11879787 ccaccatactattacaagtccccaccaccaccttcaccatctcctccaccaccatactactacaaatctcccccacccccttcacc 11879872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 180
Target Start/End: Original strand, 11904899 - 11905008
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    ||||||||||| || || || ||||| || || || ||||| |||||||||||||||||||| || || |||||||| || || |||||||| ||||| |    
T  11904899 tactactataagtcaccacccccaccatccccatcacctcctccaccatactattacaagtccccccctccaccatcaccatctccaccaccaccatact 11904998  T
Q  171 actacaagtc 180  Q
    | ||||||||    
T  11904999 attacaagtc 11905008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 52821006 - 52820933
Alignment:
Q  77 tataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctcc 150  Q
    |||||||| ||||||||||| ||||| || ||||| ||||| || ||||||||||||||||| || ||||||||    
T  52821006 tataaatctcctccaccaccttcaccatctcctccaccaccctattattacaagtctcctcctcctccatctcc 52820933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 198
Target Start/End: Original strand, 11882585 - 11882709
Alignment:
Q  74 tactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattact 173  Q
    ||||| ||||| || |||||||| ||||| ||||| ||||| || ||||||||||| || |||||||| || || || ||||| |||||||| || || |    
T  11882585 tactacaaatctccaccaccaccatcaccatccccaccccctccctactattacaaatcacctccacctccctcaccatcaccgccacctccttactatt 11882684  T
Q  174 acaagtctcccccaccaccctcacc 198  Q
    |||| || || ||||| ||||||||    
T  11882685 acaaatcacctccacctccctcacc 11882709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 177
Target Start/End: Original strand, 11889795 - 11889883
Alignment:
Q  89 ccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattactacaa 177  Q
    |||||||| ||||| || ||||| |||||||||||||||||||| || |||||||| || || || ||||| || ||||| ||||||||    
T  11889795 ccaccaccttcaccatctcctccaccaccatactattacaagtccccaccaccaccttcaccgtctccacccccaccatactactacaa 11889883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 11902596 - 11902660
Alignment:
Q  86 cctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctcc 150  Q
    ||||||||||| ||||| || ||||| ||||||||||||||||| |||||||| || ||||||||    
T  11902596 cctccaccaccttcaccatctcctccaccaccatactattacaaatctcctcctcctccatctcc 11902660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 174
Target Start/End: Original strand, 11891864 - 11891967
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    ||||| || ||||| |||||||| |||||||| || || || || || ||||||||||| ||||| ||||| |||||||| || ||||||||||| |||     
T  11891864 tactattacaaatcacctccacctccctcaccatcaccgccacctccttactattacaaatctcccccacctccatctccatctccaccacctccttatc 11891963  T
Q  171 acta 174  Q
    ||||    
T  11891964 acta 11891967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 11902677 - 11902756
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctcc 150  Q
    ||||| || ||||| || |||||||| ||||| || ||||| ||||||||||||||||| |||||||| || ||||||||    
T  11902677 tactattacaaatctcccccaccaccttcaccatctcctccaccaccatactattacaaatctcctcctcctccatctcc 11902756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 198
Target Start/End: Original strand, 11905283 - 11905362
Alignment:
Q  119 tactattacaagtctcctccaccaccatctccctcaccaccacctccatattactacaagtctcccccaccaccctcacc 198  Q
    ||||||||||| || |||||||||||||| || |||||||||||||| || || ||||| || || |||||||| |||||    
T  11905283 tactattacaaatcacctccaccaccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcacc 11905362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 198
Target Start/End: Original strand, 11905331 - 11905458
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    ||||| || ||||| ||||||||||| ||||| || ||||| || |||||||| |||||    || || ||||| |||||||| || || || |||||||    
T  11905331 tactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaaagcccccctccaccttctccctctcctcctcccccatatt 11905430  T
Q  171 actacaagtctcccccaccaccctcacc 198  Q
    ||||||| ||||| |||||||| |||||    
T  11905431 actacaaatctccaccaccaccatcacc 11905458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 174
Target Start/End: Original strand, 11905475 - 11905578
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    ||||| || ||||| ||||||||||| ||||| || || || || || ||||||||||| ||||| ||||| |||||||| || ||||||||||| |||     
T  11905475 tactattacaaatcacctccaccaccgtcaccatcaccgccacctccttactattacaaatctcccccacctccatctccatctccaccacctccttatc 11905574  T
Q  171 acta 174  Q
    ||||    
T  11905575 acta 11905578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 189
Target Start/End: Original strand, 11882630 - 11882748
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    ||||| || ||||| |||||||| |||||||| || || || || || ||||||||||| || |||||||| || || || ||||| |||||||| || |    
T  11882630 tactattacaaatcacctccacctccctcaccatcaccgccacctccttactattacaaatcacctccacctccctcaccatcaccgccacctccttact 11882729  T
Q  171 actacaagtctcccccacc 189  Q
    | ||||| |||||||||||    
T  11882730 attacaaatctcccccacc 11882748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 165
Target Start/End: Original strand, 11882678 - 11882772
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctcc 165  Q
    ||||| || ||||| |||||||| |||||||| || || || || || ||||||||||| ||||| ||||| |||||||| || |||||||||||    
T  11882678 tactattacaaatcacctccacctccctcaccatcaccgccacctccttactattacaaatctcccccacctccatctccatctccaccacctcc 11882772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11905283 - 11905389
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    ||||| || ||||| ||||||||||| || || || || || || || ||||||||||| || |||||||||||||| || || || ||||||||||| |    
T  11905283 tactattacaaatcacctccaccaccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatact 11905382  T
Q  171 actacaa 177  Q
    |||||||    
T  11905383 actacaa 11905389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 89 - 183
Target Start/End: Complemental strand, 52821042 - 52820948
Alignment:
Q  89 ccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattactacaagtctcc 183  Q
    ||||| || ||||| |||||||| |||||||| ||||| || |||||||||||||| || || || || ||||| || ||||| |||||||||||    
T  52821042 ccacctccttcaccgtcccctccaccaccatattattataaatctcctccaccaccttcaccatctcctccaccaccctattattacaagtctcc 52820948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 11879490 - 11879563
Alignment:
Q  125 tacaagtctcctccaccaccatctccctcaccaccacctccatattactacaagtctcccccaccaccctcacc 198  Q
    |||||||| || ||||| |||||||| |||||||||||||| |||   |||||||| || ||||||||||||||    
T  11879490 tacaagtcaccaccaccgccatctccttcaccaccacctccttatgtgtacaagtcaccaccaccaccctcacc 11879563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 180
Target Start/End: Original strand, 11882102 - 11882211
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    ||||||||||| || || || ||||| ||||| || ||||| |||||||||||||| |||||||| || |||||||| || || || ||||| || ||||    
T  11882102 tactactataagtcaccacccccaccatcaccatcacctcctccaccatactattataagtctccacctccaccatcaccatctcccccaccaccttatt 11882201  T
Q  171 actacaagtc 180  Q
    | || |||||    
T  11882202 attataagtc 11882211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 180
Target Start/End: Original strand, 11891336 - 11891445
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    ||||||||||| || || || ||||| ||||| || ||||| |||||||||||||| |||||||| || |||||||| || || || ||||| || ||||    
T  11891336 tactactataagtcaccacccccaccatcaccatcacctcctccaccatactattataagtctccacctccaccatcaccatctcccccaccaccttatt 11891435  T
Q  171 actacaagtc 180  Q
    | || |||||    
T  11891436 attataagtc 11891445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 198
Target Start/End: Original strand, 11902503 - 11902612
Alignment:
Q  89 ccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattactacaagtctcccccac 188  Q
    ||||| || ||||| || ||||| ||||||||||| || || ||||| |||||||| || ||||| ||||| || || || || ||||||||||| ||||    
T  11902503 ccacccccttcaccatctcctccaccaccatactactataaatctcccccaccaccctcaccctctccacccccaccttactattacaagtctcctccac 11902602  T
Q  189 caccctcacc 198  Q
    |||| |||||    
T  11902603 caccttcacc 11902612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 200
Target Start/End: Complemental strand, 52821396 - 52821267
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| || || |||||||||||||| || || ||||| || || ||||| |||||||| ||||||||||| || || ||||| || || || || |    
T  52821396 tactactacaagtcacctccaccaccctctccctcacctccacctccttactactacaagtcacctccaccaccttcaccttcacctcctccaccttact 52821297  T
Q  171 actacaagtctcccccaccaccctcaccct 200  Q
    |||| || ||||| || |||||||| ||||    
T  52821296 actataaatctcctcctccaccctctccct 52821267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 169
Target Start/End: Original strand, 11879691 - 11879774
Alignment:
Q  86 cctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatat 169  Q
    ||||||||||| || || || ||||| |||||||| || ||||||||||| |||||||| || ||||| || ||||| ||||||    
T  11879691 cctccaccaccatctccctcacctccaccaccatattactacaagtctcccccaccaccctcaccctcccctccacccccatat 11879774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 11879841 - 11879920
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctcc 150  Q
    |||||||| ||||| || ||||| || ||||| || ||||| ||||||||||| ||||| |||||||| || ||||||||    
T  11879841 tactactacaaatctcccccacccccttcaccgtctcctccaccaccatactactacaaatctcctcctcctccatctcc 11879920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 150
Target Start/End: Original strand, 11880177 - 11880256
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctcc 150  Q
    ||||| || ||||| || |||||||| ||||| || ||||| ||||||||||| ||||| |||||||| || ||||||||    
T  11880177 tactattacaaatctcccccaccaccttcaccatctcctccaccaccatactactacaaatctcctcctcctccatctcc 11880256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 198
Target Start/End: Original strand, 11882486 - 11882613
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    ||||| || ||||| ||||||||||| || || || || || || |||||||| |||||   ||| || ||||||||||| || || ||| | |||||||    
T  11882486 tactattacaaatcacctccaccaccatccccatcaccaccacctccatactactacaaaagtccccctccaccatctccatctcctccatccccatatt 11882585  T
Q  171 actacaagtctcccccaccaccctcacc 198  Q
    ||||||| ||||| |||||||| |||||    
T  11882586 actacaaatctccaccaccaccatcacc 11882613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 198
Target Start/End: Original strand, 11889537 - 11889664
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || || ||||| || ||||| ||||||||||| ||||||||||| || || || ||||| || || || || ||||| || || |    
T  11889537 tactactacaaatccccacctccaccatcgccttctcctcccccaccttactattacaaatccccaccgccaccttcaccatctcccccaccaccctact 11889636  T
Q  171 actacaagtctcccccaccaccctcacc 198  Q
    |||| || || ||||||||||| |||||    
T  11889637 actataaatcacccccaccaccttcacc 11889664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 146
Target Start/End: Original strand, 11889633 - 11889708
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccat 146  Q
    |||||||||||||| || |||||||| ||||| || ||||| ||||||||||| ||||| || || ||||| ||||    
T  11889633 tactactataaatcacccccaccaccttcaccatctcctccaccaccatactactacaaatcacccccaccgccat 11889708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 146
Target Start/End: Original strand, 11889725 - 11889756
Alignment:
Q  115 accatactattacaagtctcctccaccaccat 146  Q
    ||||||||||||||||||||||||||||||||    
T  11889725 accatactattacaagtctcctccaccaccat 11889756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 198
Target Start/End: Original strand, 11889773 - 11889856
Alignment:
Q  115 accatactattacaagtctcctccaccaccatctccctcaccaccacctccatattactacaagtctcccccaccaccctcacc 198  Q
    |||||||||||||||||| || |||||||| || || || || ||||| ||||| || |||||||| || |||||||| |||||    
T  11889773 accatactattacaagtccccaccaccaccttcaccatctcctccaccaccatactattacaagtccccaccaccaccttcacc 11889856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 198
Target Start/End: Original strand, 11891720 - 11891847
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    ||||| || ||||| ||||||||||| || || || || || || |||||||| |||||   ||| || ||||||||||| || || ||| | |||||||    
T  11891720 tactattacaaatcacctccaccaccatccccatcaccaccacctccatactactacaaaagtccccctccaccatctccatctcctccatccccatatt 11891819  T
Q  171 actacaagtctcccccaccaccctcacc 198  Q
    ||||||| ||||| |||||||| |||||    
T  11891820 actacaaatctccaccaccaccatcacc 11891847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 200
Target Start/End: Complemental strand, 52818887 - 52818768
Alignment:
Q  81 aatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattactacaagtc 180  Q
    |||| ||||||||||| ||||| || || || || || || || ||||| || |||||||||||| | || ||||| ||||||||||| ||||||||       
T  52818887 aatcccctccaccaccatcaccatctccaccacctccttattactacaaatcacctccaccaccaaccccatcacctccacctccatactactacaaaag 52818788  T
Q  181 tcccccaccaccctcaccct 200  Q
    |||||| |||||||| ||||    
T  52818787 tccccctccaccctctccct 52818768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 183
Target Start/End: Original strand, 11879811 - 11879905
Alignment:
Q  89 ccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattactacaagtctcc 183  Q
    |||||||| ||||| || ||||| ||||||||||| ||||| ||||| ||||| || || || || || ||||| ||||| |||||||| |||||    
T  11879811 ccaccaccttcaccatctcctccaccaccatactactacaaatctcccccacccccttcaccgtctcctccaccaccatactactacaaatctcc 11879905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11888193 - 11888299
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| || || || |||||||| || || || ||||| ||||| |    
T  11888193 tactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatact 11888292  T
Q  171 actacaa 177  Q
    |||||||    
T  11888293 actacaa 11888299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11888241 - 11888347
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| || || || |||||||| || || || ||||| ||||| |    
T  11888241 tactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatact 11888340  T
Q  171 actacaa 177  Q
    |||||||    
T  11888341 actacaa 11888347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11888289 - 11888395
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| || || || |||||||| || || || ||||| ||||| |    
T  11888289 tactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatact 11888388  T
Q  171 actacaa 177  Q
    |||||||    
T  11888389 actacaa 11888395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11888337 - 11888443
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| || || || |||||||| || || || ||||| ||||| |    
T  11888337 tactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatact 11888436  T
Q  171 actacaa 177  Q
    |||||||    
T  11888437 actacaa 11888443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11888385 - 11888491
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| || || || |||||||| || || || ||||| ||||| |    
T  11888385 tactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatact 11888484  T
Q  171 actacaa 177  Q
    |||||||    
T  11888485 actacaa 11888491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11888433 - 11888539
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| || || || |||||||| || || || ||||| ||||| |    
T  11888433 tactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatact 11888532  T
Q  171 actacaa 177  Q
    |||||||    
T  11888533 actacaa 11888539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11888481 - 11888587
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| || || || |||||||| || || || ||||| ||||| |    
T  11888481 tactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatact 11888580  T
Q  171 actacaa 177  Q
    |||||||    
T  11888581 actacaa 11888587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11888529 - 11888635
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| || || || |||||||| || || || ||||| ||||| |    
T  11888529 tactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatact 11888628  T
Q  171 actacaa 177  Q
    |||||||    
T  11888629 actacaa 11888635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11888577 - 11888683
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| || || || |||||||| || || || ||||| ||||| |    
T  11888577 tactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatact 11888676  T
Q  171 actacaa 177  Q
    |||||||    
T  11888677 actacaa 11888683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11888625 - 11888731
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| || || || |||||||| || || || ||||| ||||| |    
T  11888625 tactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatact 11888724  T
Q  171 actacaa 177  Q
    |||||||    
T  11888725 actacaa 11888731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11888673 - 11888779
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| || || || |||||||| || || || ||||| ||||| |    
T  11888673 tactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatact 11888772  T
Q  171 actacaa 177  Q
    |||||||    
T  11888773 actacaa 11888779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11888721 - 11888827
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| || || || |||||||| || || || ||||| ||||| |    
T  11888721 tactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatact 11888820  T
Q  171 actacaa 177  Q
    |||||||    
T  11888821 actacaa 11888827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11888769 - 11888875
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| || || || |||||||| || || || ||||| ||||| |    
T  11888769 tactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatact 11888868  T
Q  171 actacaa 177  Q
    |||||||    
T  11888869 actacaa 11888875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11888817 - 11888923
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| || || || |||||||| || || || ||||| ||||| |    
T  11888817 tactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatact 11888916  T
Q  171 actacaa 177  Q
    |||||||    
T  11888917 actacaa 11888923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11888865 - 11888971
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| || || || |||||||| || || || ||||| ||||| |    
T  11888865 tactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatact 11888964  T
Q  171 actacaa 177  Q
    |||||||    
T  11888965 actacaa 11888971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11888913 - 11889019
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| || || || |||||||| || || || ||||| ||||| |    
T  11888913 tactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatact 11889012  T
Q  171 actacaa 177  Q
    |||||||    
T  11889013 actacaa 11889019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11888961 - 11889067
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| || || || |||||||| || || || ||||| ||||| |    
T  11888961 tactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatact 11889060  T
Q  171 actacaa 177  Q
    |||||||    
T  11889061 actacaa 11889067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11889009 - 11889115
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| || || || |||||||| || || || ||||| ||||| |    
T  11889009 tactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatact 11889108  T
Q  171 actacaa 177  Q
    |||||||    
T  11889109 actacaa 11889115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11889057 - 11889163
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| || || || |||||||| || || || ||||| ||||| |    
T  11889057 tactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatact 11889156  T
Q  171 actacaa 177  Q
    |||||||    
T  11889157 actacaa 11889163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11889105 - 11889211
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| || || || |||||||| || || || ||||| ||||| |    
T  11889105 tactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatact 11889204  T
Q  171 actacaa 177  Q
    |||||||    
T  11889205 actacaa 11889211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11889153 - 11889259
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| || || || |||||||| || || || ||||| ||||| |    
T  11889153 tactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatact 11889252  T
Q  171 actacaa 177  Q
    |||||||    
T  11889253 actacaa 11889259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11889201 - 11889307
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| || || || |||||||| || || || ||||| ||||| |    
T  11889201 tactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatact 11889300  T
Q  171 actacaa 177  Q
    |||||||    
T  11889301 actacaa 11889307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11889249 - 11889355
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| || || || |||||||| || || || ||||| ||||| |    
T  11889249 tactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatact 11889348  T
Q  171 actacaa 177  Q
    |||||||    
T  11889349 actacaa 11889355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11889297 - 11889403
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| || || || |||||||| || || || ||||| ||||| |    
T  11889297 tactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatact 11889396  T
Q  171 actacaa 177  Q
    |||||||    
T  11889397 actacaa 11889403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11889345 - 11889451
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| || || || |||||||| || || || ||||| ||||| |    
T  11889345 tactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatact 11889444  T
Q  171 actacaa 177  Q
    |||||||    
T  11889445 actacaa 11889451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11889393 - 11889499
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| || || || |||||||| || || || ||||| ||||| |    
T  11889393 tactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatact 11889492  T
Q  171 actacaa 177  Q
    |||||||    
T  11889493 actacaa 11889499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 177
Target Start/End: Original strand, 11889441 - 11889547
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatatt 170  Q
    |||||||| ||||| || || ||||| || ||||| ||||| ||||||||||| ||||| || || || |||||||| || || || ||||| ||||| |    
T  11889441 tactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatact 11889540  T
Q  171 actacaa 177  Q
    |||||||    
T  11889541 actacaa 11889547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 11902287 - 11902393
Alignment:
Q  86 cctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattactacaagtctcccc 185  Q
    |||||||||||||| ||||| ||||| || || ||||| || || || ||||||||||| || || || || || || ||||| || ||||||||||| |    
T  11902287 cctccaccaccctctccttcacctccacctccttactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctc 11902386  T
Q  186 caccacc 192  Q
    |||||||    
T  11902387 caccacc 11902393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 200
Target Start/End: Complemental strand, 52818846 - 52818720
Alignment:
Q  74 tactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattact 173  Q
    ||||| ||||| |||||||||||  | || || ||||| || |||||||| |||||   ||| || ||||| |||||||| || ||||||||||| || |    
T  52818846 tactacaaatcacctccaccaccaaccccatcacctccacctccatactactacaaaagtccccctccaccctctccctctcctccacctccatactatt 52818747  T
Q  174 acaagtctcccccaccaccctcaccct 200  Q
    |||||  |||||| |||||||| ||||    
T  52818746 acaagagtccccctccaccctctccct 52818720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 144
Target Start/End: Original strand, 11904803 - 11904876
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccacc 144  Q
    ||||||||||| || || || ||||| ||||| |||||||| ||||| || |||||||| |||||||| |||||    
T  11904803 tactactataagtcaccacccccaccatcaccatcccctcctccaccttattattacaaatctcctcctccacc 11904876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 168
Target Start/End: Complemental strand, 52819185 - 52819088
Alignment:
Q  71 tactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccata 168  Q
    ||||||||||| || || || ||||| || || || |||||||| |||||||||||||| ||||| ||||| ||||| || || ||||| || |||||    
T  52819185 tactactataagtcaccacctccaccatccccatcacctccccctccatactattacaaatctcccccaccgccatcaccatccccacctccaccata 52819088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 113 - 198
Target Start/End: Complemental strand, 52819191 - 52819106
Alignment:
Q  113 ccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattactacaagtctcccccaccaccctcacc 198  Q
    ||||||||||| || ||||| || || |||||||| || ||||| || |||||||| || ||||| ||||||||||| || |||||    
T  52819191 ccaccatactactataagtcaccacctccaccatccccatcacctccccctccatactattacaaatctcccccaccgccatcacc 52819106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 11880096 - 11880160
Alignment:
Q  86 cctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctcc 150  Q
    ||||| ||||| ||||| || ||||| ||||||||||| ||||| |||||||| || ||||||||    
T  11880096 cctcccccaccttcaccatctcctccaccaccatactactacaaatctcctcctcctccatctcc 11880160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 189
Target Start/End: Complemental strand, 52818687 - 52818587
Alignment:
Q  89 ccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattactacaagtctcccccac 188  Q
    |||||||| || ||||| || || || || ||||| ||||| || |||||||||||||| || ||||| |||||||| || || |||||||| || ||||    
T  52818687 ccaccaccatcgccttctccaccacctccctactactacaaatcacctccaccaccatccccgtcacctccacctccttactattacaagtcacctccac 52818588  T
Q  189 c 189  Q
    |    
T  52818587 c 52818587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 192
Target Start/End: Complemental strand, 52818732 - 52818632
Alignment:
Q  92 ccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattactacaagtctcccccaccac 191  Q
    |||||||| || ||||| || || |||||||||||  | || || ||||||||||| || || ||||||||||| || |||||||| || || |||||||    
T  52818732 ccaccctctccctccccccctcctccatactattatcattccccaccaccaccatcgccttctccaccacctccctactactacaaatcacctccaccac 52818633  T
Q  192 c 192  Q
    |    
T  52818632 c 52818632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1918 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold1918
Description:

Target: scaffold1918; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 80 - 183
Target Start/End: Complemental strand, 104 - 1
Alignment:
Q  80 aaatcgcctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattactacaagt 179  Q
    ||||| || ||||| ||||||| ||||||||| ||||| ||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||||||||    
T  104 aaatcccccccacccccctcacattcccctccaccaccttactattacaaatctccaccaccaccatctccctcacctccacctccatactactacaagt 5  T
Q  180 ctcc 183  Q
    ||||    
T  4 ctcc 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000001; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 24477699 - 24477658
Alignment:
Q  128 aagtctcctccaccaccatctccctcaccaccacctccatat 169  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  24477699 aagtctcctccaccaccatctccctcaccacctcctccatat 24477658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 24421313 - 24421250
Alignment:
Q  137 ccaccaccatctccctcaccaccacctccatattactacaagtctcccccaccaccctcaccct 200  Q
    |||||||| ||||| ||||||||||||||||||  |||||||||||| || ||||| |||||||    
T  24421313 ccaccaccctctccatcaccaccacctccatatgtctacaagtctcctcctccaccatcaccct 24421250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 98 - 192
Target Start/End: Original strand, 24470371 - 24470465
Alignment:
Q  98 tcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattactacaagtctcccccaccacc 192  Q
    |||||||| ||||||||||||||    || |||  ||| |||||||| ||||| ||||||||||||||||||  |||||||||||| || |||||    
T  24470371 tcaccttcacctcccccaccatatgtctataagagtccaccaccaccctctccatcaccaccacctccatatgtctacaagtctcctcctccacc 24470465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 199
Target Start/End: Complemental strand, 24477486 - 24477388
Alignment:
Q  101 ccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattactacaagtctcccccaccaccctcaccc 199  Q
    ||||| ||||||||||||||    ||||||  |||||| | ||| ||||| ||||||||||||||||||  |||||||||||| || ||||| ||||||    
T  24477486 ccttcacctcccccaccatatgtctacaagagtcctcctctaccttctccatcaccaccacctccatatgtctacaagtctcctcctccaccatcaccc 24477388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 24420695 - 24420634
Alignment:
Q  131 tctcctccaccaccatctccctcaccaccacctccatattactacaagtctcccccaccacc 192  Q
    |||||||| ||||||||||| |||||||| |||||||||  ||||||||| || ||||||||    
T  24420695 tctcctcctccaccatctccttcaccaccgcctccatatatctacaagtcaccaccaccacc 24420634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 24470602 - 24470663
Alignment:
Q  137 ccaccaccatctccctcaccaccacctccatattactacaagtctcccccaccaccctcacc 198  Q
    |||||||| ||||| ||||||||||||||||||  |||||||||||| || ||||| |||||    
T  24470602 ccaccaccctctccatcaccaccacctccatatgtctacaagtctcctcctccaccatcacc 24470663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 24482267 - 24482215
Alignment:
Q  113 ccaccatactattacaagtctcctccaccaccatctccctcaccaccacctcc 165  Q
    |||||||| || ||||| ||||| |||||||||||||| ||||||||||||||    
T  24482267 ccaccatattactacaaatctccaccaccaccatctccatcaccaccacctcc 24482215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 180
Target Start/End: Complemental strand, 24477546 - 24477503
Alignment:
Q  137 ccaccaccatctccctcaccaccacctccatattactacaagtc 180  Q
    |||||||||||||||||||| ||||||||||||  |||||||||    
T  24477546 ccaccaccatctccctcacctccacctccatatgtctacaagtc 24477503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 192
Target Start/End: Complemental strand, 24421268 - 24421162
Alignment:
Q  86 cctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattactacaagtctcccc 185  Q
    ||||| ||||| ||||| || ||||||||||| ||   ||||||||| || ||||| ||||| || ||||| || |||||||||  ||||||||| || |    
T  24421268 cctcctccaccatcaccctcacctcccccaccttatgtttacaagtcaccaccacctccatccccttcacctcctcctccatatgtctacaagtcaccac 24421169  T
Q  186 caccacc 192  Q
    |||||||    
T  24421168 caccacc 24421162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 180
Target Start/End: Original strand, 24470647 - 24470741
Alignment:
Q  86 cctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattactacaagtc 180  Q
    ||||| ||||| |||||||| ||||||||||| ||   ||| ||||| || ||||| |||||||| ||||| || |||||||||  |||||||||    
T  24470647 cctcctccaccatcaccttctcctcccccaccctatatttataagtcgccaccacctccatctccttcacctcctcctccatatgtctacaagtc 24470741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 77 - 169
Target Start/End: Complemental strand, 24420701 - 24420609
Alignment:
Q  77 tataaatcgcctccaccaccctcaccttcccctcccccaccatactat-tacaagtctcctccaccaccatctccctcaccaccacctccatat 169  Q
    |||||||| ||||| ||||| || ||||| || || || ||||| ||| |||||||| || ||||||||||| || ||||||||||||||||||    
T  24420701 tataaatctcctcctccaccatctccttcaccaccgcctccata-tatctacaagtcaccaccaccaccatccccttcaccaccacctccatat 24420609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0879 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0879
Description:

Target: scaffold0879; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 200
Target Start/End: Original strand, 4461 - 4524
Alignment:
Q  137 ccaccaccatctccctcaccaccacctccatattactacaagtctcccccaccaccctcaccct 200  Q
    |||||||| ||||| ||||||||||||||||||  |||||||||||| || ||||| |||||||    
T  4461 ccaccaccctctccatcaccaccacctccatatgtctacaagtctcctcctccaccatcaccct 4524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0879; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 4506 - 4612
Alignment:
Q  86 cctccaccaccctcaccttcccctcccccaccatactattacaagtctcctccaccaccatctccctcaccaccacctccatattactacaagtctcccc 185  Q
    ||||| ||||| ||||| || ||||||||||||||   ||||||||| || ||||| ||||| || ||||| || |||||||||  ||||||||| || |    
T  4506 cctcctccaccatcaccctcacctcccccaccatatgtttacaagtcaccaccacctccatccccttcacctcctcctccatatgtctacaagtcaccac 4605  T
Q  186 caccacc 192  Q
    |||||||    
T  4606 caccacc 4612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 41900350 - 41900283
Alignment:
Q  125 tacaagtctcctccaccaccatctccctcaccaccacctccatattactacaagtctcccccaccacc 192  Q
    ||||| ||||||||||| || ||||| ||||||||||||||||||  |||||||||||| || |||||    
T  41900350 tacaaatctcctccacctccctctccttcaccaccacctccatatgtctacaagtctcctcctccacc 41900283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University