View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3472_low_11 (Length: 430)
Name: NF3472_low_11
Description: NF3472
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3472_low_11 |
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Alignment Details
Target: chr2 (Bit Score: 171; Significance: 1e-91; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 241 - 415
Target Start/End: Original strand, 32562529 - 32562703
Alignment:
| Q |
241 |
acatacatacaaagagtggttcagtttataactataaaaattactattgatatatgaaatcgttaaccacattctcaaattgaaatgaaaactaaaattg |
340 |
Q |
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| T |
32562529 |
acatacatacaaagagtggttcagtttataactataaaaattactattgatatatgaaaccgttaaccacattctcaaattgaaatgaaaactaaaattg |
32562628 |
T |
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| Q |
341 |
cgatacaatcctgaaattagtgttaatattgggaaagggagaaaaagaacggtagaaaggagaaatttgggaaat |
415 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32562629 |
cgatacaatcctgaaattagtgttaatattgggaaagggagaaaaagaacggtagaaaggagaaatttgggaaat |
32562703 |
T |
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