View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3472_low_35 (Length: 248)
Name: NF3472_low_35
Description: NF3472
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3472_low_35 |
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Alignment Details
Target: chr3 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 4 - 231
Target Start/End: Original strand, 51728282 - 51728509
Alignment:
| Q |
4 |
tctcataataattagaatagaaccccttccagattttcattttttcctttcagaatttctaatcaaattcattattgctgagttttgttcgaatgttgaa |
103 |
Q |
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| T |
51728282 |
tctcataataattagaatagaaccccttccagattttcattttttcctttcataatttctaatcaaattcattattgctgagttttgttcgaatgttgaa |
51728381 |
T |
|
| Q |
104 |
tcttaaaaaggttgcccaatgtgatgtaatgtaatgttggaaactgttcaggaaattgccgtatatcttcatagatttcacaatcttgatctctttaagc |
203 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51728382 |
tcttaaaaaggttgctcaatgtgatgtaatgtaatgttggaaactgttcaggaaattgccgtatatcttcatagatttcacaatcttgatctctttaagc |
51728481 |
T |
|
| Q |
204 |
aagggtgggtatatatatacattcattc |
231 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
51728482 |
aagggtgggtatatatatacattcattc |
51728509 |
T |
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