View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3475_low_7 (Length: 481)

Name: NF3475_low_7
Description: NF3475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3475_low_7
NF3475_low_7
[»] scaffold0026 (1 HSPs)
scaffold0026 (16-471)||(12437-12872)
[»] chr2 (22 HSPs)
chr2 (19-471)||(26582856-26583313)
chr2 (16-163)||(5706610-5706758)
chr2 (13-246)||(23062983-23063216)
chr2 (13-209)||(23878286-23878481)
chr2 (75-189)||(23089608-23089722)
chr2 (153-471)||(23168973-23169294)
chr2 (153-471)||(23580230-23580551)
chr2 (75-179)||(21907744-21907848)
chr2 (75-189)||(23102036-23102150)
chr2 (66-205)||(29281336-29281475)
chr2 (35-143)||(9978-10086)
chr2 (90-246)||(24660876-24661032)
chr2 (35-146)||(25181446-25181557)
chr2 (51-248)||(26884503-26884701)
chr2 (133-236)||(23264421-23264524)
chr2 (409-467)||(20914263-20914321)
chr2 (13-69)||(23264557-23264613)
chr2 (97-187)||(27208318-27208408)
chr2 (97-187)||(27210653-27210743)
chr2 (443-471)||(200822-200850)
chr2 (443-471)||(6744292-6744320)
chr2 (443-471)||(27367551-27367579)
[»] scaffold0634 (2 HSPs)
scaffold0634 (82-471)||(2747-3136)
scaffold0634 (51-87)||(3181-3217)
[»] chr6 (29 HSPs)
chr6 (19-471)||(29614738-29615195)
chr6 (16-211)||(12167637-12167832)
chr6 (16-211)||(19286546-19286741)
chr6 (18-211)||(19877730-19877923)
chr6 (16-211)||(19883506-19883701)
chr6 (16-163)||(34640575-34640723)
chr6 (16-163)||(34647249-34647397)
chr6 (16-211)||(19786455-19786650)
chr6 (16-176)||(25470290-25470451)
chr6 (18-146)||(21365067-21365195)
chr6 (18-146)||(23969049-23969177)
chr6 (75-241)||(18799754-18799920)
chr6 (75-390)||(25396340-25396654)
chr6 (75-209)||(21565765-21565899)
chr6 (355-470)||(12167420-12167535)
chr6 (355-470)||(19877513-19877628)
chr6 (355-470)||(19883289-19883404)
chr6 (46-236)||(19471891-19472080)
chr6 (35-146)||(20008493-20008604)
chr6 (355-470)||(19286329-19286444)
chr6 (355-470)||(19786751-19786866)
chr6 (133-209)||(9186827-9186903)
chr6 (70-248)||(19300317-19300495)
chr6 (133-230)||(24513456-24513553)
chr6 (434-467)||(19439888-19439921)
chr6 (16-69)||(24513370-24513423)
chr6 (409-465)||(23105384-23105440)
chr6 (82-126)||(24513425-24513469)
chr6 (443-471)||(24562463-24562491)
[»] chr3 (27 HSPs)
chr3 (13-467)||(18914193-18914646)
chr3 (19-470)||(41455687-41456142)
chr3 (19-165)||(24192272-24192418)
chr3 (75-209)||(16802041-16802175)
chr3 (77-250)||(13324376-13324549)
chr3 (75-179)||(55499700-55499804)
chr3 (133-250)||(13302844-13302961)
chr3 (52-205)||(14865184-14865338)
chr3 (13-129)||(17241085-17241201)
chr3 (133-250)||(13313520-13313637)
chr3 (346-406)||(18136117-18136177)
chr3 (17-86)||(10390034-10390104)
chr3 (17-86)||(10415123-10415193)
chr3 (17-86)||(10421793-10421863)
chr3 (409-467)||(13036915-13036973)
chr3 (125-209)||(17243260-17243343)
chr3 (415-467)||(18136253-18136306)
chr3 (350-406)||(18129607-18129663)
chr3 (409-467)||(18129733-18129792)
chr3 (434-467)||(31690553-31690586)
chr3 (434-467)||(31943629-31943662)
chr3 (443-471)||(13968801-13968829)
chr3 (443-471)||(13974276-13974304)
chr3 (443-471)||(14084712-14084740)
chr3 (443-471)||(14090113-14090141)
chr3 (443-471)||(24123171-24123199)
chr3 (443-471)||(49399654-49399682)
[»] scaffold0025 (1 HSPs)
scaffold0025 (19-165)||(14977-15123)
[»] chr7 (32 HSPs)
chr7 (19-250)||(13742945-13743174)
chr7 (16-211)||(13006706-13006901)
chr7 (19-212)||(13123506-13123698)
chr7 (16-162)||(12591230-12591377)
chr7 (13-236)||(13678772-13678995)
chr7 (13-209)||(16676660-16676845)
chr7 (13-209)||(17650896-17651081)
chr7 (19-212)||(12710435-12710627)
chr7 (18-146)||(3857953-3858082)
chr7 (75-179)||(11389922-11390026)
chr7 (35-179)||(20311597-20311740)
chr7 (41-230)||(46625275-46625464)
chr7 (35-146)||(2464763-2464874)
chr7 (81-179)||(11383440-11383538)
chr7 (355-471)||(13742686-13742803)
chr7 (35-205)||(16090425-16090595)
chr7 (355-471)||(13123851-13123967)
chr7 (355-470)||(13006489-13006604)
chr7 (35-207)||(29181654-29181826)
chr7 (355-471)||(12710780-12710896)
chr7 (51-174)||(14320192-14320316)
chr7 (75-179)||(21231571-21231674)
chr7 (409-467)||(12694777-12694835)
chr7 (409-467)||(15142390-15142448)
chr7 (434-467)||(1612809-1612842)
chr7 (415-467)||(14945802-14945856)
chr7 (415-467)||(15373395-15373449)
chr7 (409-467)||(16073896-16073954)
chr7 (413-467)||(16476067-16476121)
chr7 (443-471)||(4280144-4280172)
chr7 (39-86)||(13678982-13679030)
chr7 (443-471)||(19616476-19616504)
[»] chr5 (28 HSPs)
chr5 (16-211)||(23527904-23528099)
chr5 (39-179)||(18408491-18408631)
chr5 (18-146)||(28889925-28890053)
chr5 (18-146)||(28896629-28896757)
chr5 (18-146)||(28909877-28910005)
chr5 (18-146)||(28931569-28931697)
chr5 (18-146)||(28946272-28946400)
chr5 (35-146)||(19236299-19236410)
chr5 (35-144)||(22467181-22467290)
chr5 (355-470)||(23527632-23527747)
chr5 (35-146)||(22460555-22460666)
chr5 (346-406)||(22232436-22232496)
chr5 (18-146)||(28933070-28933200)
chr5 (16-86)||(20819618-20819689)
chr5 (16-86)||(20826718-20826789)
chr5 (51-187)||(34829441-34829578)
chr5 (413-467)||(10035305-10035359)
chr5 (413-467)||(21901795-21901849)
chr5 (414-467)||(18819096-18819149)
chr5 (75-123)||(22439322-22439370)
chr5 (413-467)||(21869484-21869538)
chr5 (413-467)||(21873764-21873818)
chr5 (418-467)||(22232575-22232625)
chr5 (133-179)||(22439360-22439406)
chr5 (409-467)||(25013745-25013803)
chr5 (443-471)||(1857471-1857499)
chr5 (435-467)||(21624719-21624751)
chr5 (443-471)||(21675439-21675467)
[»] chr1 (16 HSPs)
chr1 (18-211)||(41111214-41111407)
chr1 (76-177)||(18712117-18712218)
chr1 (35-146)||(20858305-20858416)
chr1 (35-146)||(21705674-21705785)
chr1 (35-146)||(21710217-21710328)
chr1 (355-470)||(41110997-41111112)
chr1 (35-146)||(20851678-20851789)
chr1 (346-406)||(20941657-20941717)
chr1 (41-246)||(22030298-22030504)
chr1 (133-246)||(11157441-11157554)
chr1 (50-187)||(19961547-19961684)
chr1 (415-467)||(20941793-20941846)
chr1 (409-467)||(21698285-21698344)
chr1 (409-467)||(23631145-23631203)
chr1 (443-471)||(21542237-21542265)
chr1 (443-471)||(42095871-42095899)
[»] scaffold1773 (2 HSPs)
scaffold1773 (19-212)||(452-644)
scaffold1773 (355-471)||(153-269)
[»] chr4 (19 HSPs)
chr4 (16-212)||(8046420-8046616)
chr4 (16-163)||(53483023-53483171)
chr4 (35-187)||(11847462-11847614)
chr4 (13-179)||(15407454-15407608)
chr4 (35-205)||(16147376-16147546)
chr4 (75-166)||(14486049-14486140)
chr4 (41-187)||(13887144-13887289)
chr4 (41-187)||(13888001-13888146)
chr4 (41-173)||(15244587-15244719)
chr4 (45-168)||(15307497-15307620)
chr4 (346-406)||(14555881-14555941)
chr4 (355-471)||(8046777-8046893)
chr4 (410-467)||(30237938-30237995)
chr4 (46-246)||(8834185-8834385)
chr4 (197-250)||(14485988-14486041)
chr4 (413-467)||(14821545-14821599)
chr4 (288-341)||(8046692-8046745)
chr4 (415-467)||(14556017-14556070)
chr4 (434-467)||(26077669-26077702)
[»] scaffold0247 (1 HSPs)
scaffold0247 (16-189)||(10667-10829)
[»] chr8 (17 HSPs)
chr8 (19-212)||(23865885-23866078)
chr8 (16-126)||(17053949-17054060)
chr8 (13-179)||(14057148-14057302)
chr8 (13-179)||(25111354-25111508)
chr8 (35-146)||(24321216-24321327)
chr8 (75-236)||(18613531-18613691)
chr8 (355-471)||(19902808-19902924)
chr8 (355-471)||(23865615-23865732)
chr8 (346-406)||(19987990-19988050)
chr8 (393-470)||(17053780-17053858)
chr8 (415-467)||(21282245-21282298)
chr8 (409-467)||(20005554-20005612)
chr8 (413-467)||(22743893-22743947)
chr8 (434-467)||(21669043-21669076)
chr8 (415-466)||(19988126-19988178)
chr8 (443-471)||(23825305-23825333)
chr8 (443-471)||(30766917-30766945)
[»] scaffold0317 (2 HSPs)
scaffold0317 (13-236)||(665-888)
scaffold0317 (39-86)||(875-923)
[»] scaffold0456 (2 HSPs)
scaffold0456 (16-298)||(243-504)
scaffold0456 (16-298)||(7388-7649)
[»] scaffold0222 (1 HSPs)
scaffold0222 (13-230)||(16086-16303)
[»] scaffold0117 (2 HSPs)
scaffold0117 (19-211)||(9167-9358)
scaffold0117 (355-471)||(9512-9628)
[»] scaffold0154 (1 HSPs)
scaffold0154 (75-250)||(30195-30370)
[»] scaffold0249 (2 HSPs)
scaffold0249 (293-406)||(7557-7670)
scaffold0249 (399-467)||(7730-7798)
[»] scaffold0461 (2 HSPs)
scaffold0461 (13-209)||(581-766)
scaffold0461 (112-209)||(7605-7702)
[»] scaffold0476 (1 HSPs)
scaffold0476 (52-209)||(3854-4011)
[»] scaffold0232 (1 HSPs)
scaffold0232 (41-246)||(18961-19166)
[»] scaffold0138 (1 HSPs)
scaffold0138 (41-246)||(1117-1322)
[»] scaffold0053 (2 HSPs)
scaffold0053 (40-359)||(81764-82082)
scaffold0053 (35-205)||(80036-80206)
[»] scaffold0029 (3 HSPs)
scaffold0029 (19-471)||(110939-111378)
scaffold0029 (35-146)||(91747-91858)
scaffold0029 (35-146)||(97473-97584)
[»] scaffold0124 (1 HSPs)
scaffold0124 (13-178)||(34861-35015)
[»] scaffold0310 (1 HSPs)
scaffold0310 (78-179)||(6876-6976)
[»] scaffold0924 (1 HSPs)
scaffold0924 (19-118)||(1343-1442)
[»] scaffold0077 (3 HSPs)
scaffold0077 (75-209)||(4195-4329)
scaffold0077 (351-404)||(17972-18025)
scaffold0077 (351-404)||(23605-23658)
[»] scaffold0028 (4 HSPs)
scaffold0028 (75-236)||(65414-65575)
scaffold0028 (41-168)||(1445-1572)
scaffold0028 (441-471)||(52350-52380)
scaffold0028 (443-471)||(46947-46975)
[»] scaffold0090 (1 HSPs)
scaffold0090 (51-215)||(17497-17661)
[»] scaffold0235 (2 HSPs)
scaffold0235 (26-179)||(23192-23334)
scaffold0235 (26-209)||(15475-15647)
[»] scaffold0004 (2 HSPs)
scaffold0004 (13-228)||(116183-116388)
scaffold0004 (75-209)||(129221-129355)
[»] scaffold0094 (1 HSPs)
scaffold0094 (41-236)||(51554-51749)
[»] scaffold0085 (1 HSPs)
scaffold0085 (35-163)||(4217-4345)
[»] scaffold0031 (2 HSPs)
scaffold0031 (41-246)||(121200-121406)
scaffold0031 (41-246)||(132077-132283)
[»] scaffold0139 (1 HSPs)
scaffold0139 (12-236)||(15521-15733)
[»] scaffold0020 (1 HSPs)
scaffold0020 (75-228)||(102503-102656)
[»] scaffold0023 (1 HSPs)
scaffold0023 (35-128)||(134867-134960)
[»] scaffold1061 (1 HSPs)
scaffold1061 (129-230)||(1716-1817)
[»] scaffold0107 (1 HSPs)
scaffold0107 (82-179)||(41171-41267)
[»] scaffold0348 (3 HSPs)
scaffold0348 (346-406)||(1527-1587)
scaffold0348 (415-467)||(1663-1716)
scaffold0348 (434-467)||(3107-3140)
[»] scaffold0001 (3 HSPs)
scaffold0001 (355-471)||(174440-174557)
scaffold0001 (51-248)||(493588-493786)
scaffold0001 (103-165)||(525142-525204)
[»] scaffold0483 (1 HSPs)
scaffold0483 (50-181)||(11569-11700)
[»] scaffold0006 (1 HSPs)
scaffold0006 (19-69)||(49595-49645)
[»] scaffold0011 (2 HSPs)
scaffold0011 (415-467)||(152546-152599)
scaffold0011 (443-471)||(174529-174557)
[»] scaffold0108 (1 HSPs)
scaffold0108 (411-467)||(45691-45747)
[»] scaffold0535 (1 HSPs)
scaffold0535 (415-465)||(5969-6020)
[»] scaffold0244 (1 HSPs)
scaffold0244 (409-467)||(13789-13847)
[»] scaffold0049 (1 HSPs)
scaffold0049 (413-467)||(42870-42924)
[»] scaffold1853 (1 HSPs)
scaffold1853 (415-467)||(741-793)
[»] scaffold0261 (2 HSPs)
scaffold0261 (112-187)||(24192-24267)
scaffold0261 (51-87)||(24070-24106)
[»] scaffold0180 (1 HSPs)
scaffold0180 (413-467)||(12616-12670)
[»] scaffold0167 (1 HSPs)
scaffold0167 (409-467)||(20024-20082)
[»] scaffold0005 (1 HSPs)
scaffold0005 (413-467)||(18110-18164)
[»] scaffold0266 (1 HSPs)
scaffold0266 (434-467)||(23183-23216)
[»] scaffold0106 (1 HSPs)
scaffold0106 (443-471)||(38582-38610)
[»] scaffold0076 (2 HSPs)
scaffold0076 (443-471)||(30113-30141)
scaffold0076 (443-471)||(35514-35542)


Alignment Details
Target: scaffold0026 (Bit Score: 176; Significance: 1e-94; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 16 - 471
Target Start/End: Original strand, 12437 - 12872
Alignment:
Q  16 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtc 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||    
T  12437 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcgaaccgtaagcgagctgaacccagacctactgtaagccggtc 12536  T
Q  116 gctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaacttt-gctttgtgcattgaggggaccttttgagcattctaaa 214  Q
    ||                    ||||||||||||  |||||||||||| ||||||||||||| |||| |||||  |||||||| | ||||||||||||||    
T  12537 gc--------------------ttaagcgaagtgagccttagtcagcctctttctgaacttttgcttcgtgcac-gaggggacttcttgagcattctaaa 12615  T
Q  215 atatctctttcaacttatataatccttgtataggtagcagaaccctacta-aacgctctgatgatcgaatttggttgatgttagtaaattttggagatga 313  Q
    |||| || || ||||| ||||  ||||||||||||| ||||| ||||||| |||   | | |||||||||| ||||||||||||| ||||||||||||||    
T  12616 atatttcctttaacttgtatatcccttgtataggtatcagaatcctactagaacaagccggtgatcgaatt-ggttgatgttagtgaattttggagatga 12714  T
Q  314 ctgagtatgaaatcaagtgattatatattac-attgaatgaaattgatgtatgtgcataattataattaattgggcatgttctggattgttggaagtgt- 411  Q
     |||||| |||||||||||| | ||||  || ||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||| ||| | |     
T  12715 ttgagtaagaaatcaagtgaatgtata--actattgaatgaaattgatgtatgcgcataattataattaattgtgtatgttctggattgttagaactctc 12812  T
Q  412 ggggttgtaagtcatatgaaacatatgtatggttgagttgtatgtagatatacacaggtt 471  Q
    || || ||||||||||||| | |||||| | |||||||||||||||||||||||||||||    
T  12813 ggagtagtaagtcatatgagatatatgtgtagttgagttgtatgtagatatacacaggtt 12872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 166; Significance: 1e-88; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 19 - 471
Target Start/End: Complemental strand, 26583313 - 26582856
Alignment:
Q  19 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgct 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| || ||||||||||||||||||    
T  26583313 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcgacccgtaagcgagctgaacccagacctactgtaagccggtcgct 26583214  T
Q  119 caagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac-tttgctttgtgcattgaggggaccttttgagcattctaaaata 217  Q
     |||||||||||||||||||||||||||||    |||||||||||   |||||||| |||| || |||||  |||||||| | |||||||||||| ||||    
T  26583213 taagcgaactagccgtcgcttaagcgaagtaagtcttagtcagccttcttctgaacttttgtttcgtgca-ggaggggacttcttgagcattctataata 26583115  T
Q  218 tctctttcaacttatataatccttgtataggtagcagaaccctacta-aacgctctgatgatcgaatttggttgatgttagtaaattttggagatgactg 316  Q
    | ||||| ||||  ||||| ||| || |||||| | ||  |||| || |||   | | |||||||| ||| ||| ||||||||||| |||||||||| ||    
T  26583114 tttcttttaactagtataaccctggtgtaggtaaccgactcctattagaactagccggtgatcgaa-ttgattggtgttagtaaatgttggagatgattg 26583016  T
Q  317 agtatgaaatcaagtgattatat--attaca--ttgaatgaaattgatgtatgtgcataattataattaattgggcatgttctggattgttggaagtgtg 412  Q
    ||||||||||| ||||| |||||  || |||  | |||||  ||||||||||| |||||||||||| |||||| | ||||||||||||||| ||  || |    
T  26583015 agtatgaaatcgagtgaatatatacataacatgtggaatgtgattgatgtatgcgcataattataaataattgtgtatgttctggattgtttgagttgcg 26582916  T
Q  413 gggttgtaagtcatatgaaacatatgt-atggttgagttgtatgtagatatacacaggtt 471  Q
    | || ||||||||||| |||||||||| || ||| |||||||||||||||||||||||||    
T  26582915 gagtagtaagtcatataaaacatatgtaatagttaagttgtatgtagatatacacaggtt 26582856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 5706610 - 5706758
Alignment:
Q  16 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggt 114  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| | |||||||||| |||| |||| | | |||||||||| |||    
T  5706610 cctgtgagcgaaaaaccattttgattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgagcccagagcctactgtaagctggt 5706709  T
Q  115 cgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagcc 163  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||    
T  5706710 cgcttaagcgaactagccgtcgcttaagcgaagtgaaccttagtcagcc 5706758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 13 - 246
Target Start/End: Complemental strand, 23063216 - 23062983
Alignment:
Q  13 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccg 112  Q
    ||||| || ||||||||| |||||  ||||||||||||||||||| ||||||||||  ||| |  ||| ||||||   ||||| ||||  ||||||||||    
T  23063216 gaacccgtaagcgaaaaatcatttgcattctgtcagaagttcgcttaagcgaaccgcaagcgaggcgttagcgagtgaaaccccaactctctgtaagccg 23063117  T
Q  113 gtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattct 211  Q
    |||||| |||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||| | ||||||| |||||| |||||||||||||      
T  23063116 gtcgcttaagcgaaccagccgtcgcttaagcgaagttgaccttagtcagccactttttgaactttgcctcgtgcatt-aggggatccttttgagcattta 23063018  T
Q  212 aaaatatctctttcaacttatataatccttgtata 246  Q
    ||||| | ||||||||||| ||||| |||| ||||    
T  23063017 aaaatgtttctttcaacttgtataacccttatata 23062983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 13 - 209
Target Start/End: Complemental strand, 23878481 - 23878286
Alignment:
Q  13 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccg 112  Q
    ||||||||||||||  |||| ||||||||||| ||  | ||||||||||||||| |  ||| |||||||||||||| ||||||| |||||||||||||||    
T  23878481 gaacctgtgagcgaggaacctttttgattctgccaagaattcgctcaagcgaactgcaagcgaaccgtaagcgagcagaacccagacttactgtaagccg 23878382  T
Q  113 gtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcatt 209  Q
    |||||| ||||||||||||||||||||||||||||  ||||||||||||||||||| ||||| |||| | ||||| | |||||| |||||||||||||    
T  23878381 gtcgcttaagcgaactagccgtcgcttaagcgaagatgaccttagtcagccacttt-tgaaccttgcctcgtgcact-aggggatccttttgagcatt 23878286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 75 - 189
Target Start/End: Original strand, 23089608 - 23089722
Alignment:
Q  75 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 174  Q
    |||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| | ||||||||||||||||| ||||||||||||||||||| |||||    
T  23089608 aaccgtaagcgagcagaacccagacttactgtaagccggtcgcttaagcgaactggacgtcgcttaagcgaagttgaccttagtcagccactttttgaac 23089707  T
Q  175 tttgctttgtgcatt 189  Q
     |||| | |||||||    
T  23089708 gttgcctcgtgcatt 23089722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 153 - 471
Target Start/End: Original strand, 23168973 - 23169294
Alignment:
Q  153 cttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataatccttgtataggtag 251  Q
    ||||||||||| |||||||||  ||| || ||| | | |||||| ||||||| | |||||||||| | ||||||||||| ||||| |||||||||||||     
T  23168973 cttagtcagcctctttctgaaaattgtttcgtgtact-aggggacccttttgggtattctaaaatgtttctttcaacttgtataacccttgtataggtat 23169071  T
Q  252 cagaaccctacta-aacgctctgatgatcgaatttggttgatgttagtaaattttggagatgactgagtatgaaatcaagtgattatatattaca--ttg 348  Q
     || | ||||||| ||| ||||| |||||| | ||||||||||||| | |||||||||||||  |||||||||||||| |||| | ||||| |||  | |    
T  23169072 taggatcctactagaacactctggtgatcgca-ttggttgatgttaatgaattttggagatgtttgagtatgaaatcatgtgaatgtatataacatgtgg 23169170  T
Q  349 aatgaaattgatgtatgtgcataattataattaattgggcatgttctggattgttggaagtgtggggttgtaagtcatatgaaacatatgta-tggttga 447  Q
    ||||  | ||||||||| |||||||||||| | |||| | |||| |||||||||| ||  || || || |||||| |||||||| ||||||| | || ||    
T  23169171 aatgtgaatgatgtatgcgcataattataaatgattgtgtatgtgctggattgtttgagttgcggagtagtaagttatatgaaatatatgtattagtgga 23169270  T
Q  448 gttgtatgtagatatacacaggtt 471  Q
    ||||||||| ||||||||| ||||    
T  23169271 gttgtatgtggatatacacgggtt 23169294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 153 - 471
Target Start/End: Original strand, 23580230 - 23580551
Alignment:
Q  153 cttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataatccttgtataggtag 251  Q
    ||||||||||| |||||||||  ||| || ||| | | |||||| ||||||| | |||||||||| | ||||||||||| ||||| |||||||||||||     
T  23580230 cttagtcagcctctttctgaaaattgtttcgtgtact-aggggacccttttgggtattctaaaatgtttctttcaacttgtataacccttgtataggtat 23580328  T
Q  252 cagaaccctacta-aacgctctgatgatcgaatttggttgatgttagtaaattttggagatgactgagtatgaaatcaagtgattatatattaca--ttg 348  Q
     || | ||||||| ||| ||||| |||||| | ||||||||||||| | |||||||||||||  |||||||||||||| |||| | ||||| |||  | |    
T  23580329 taggatcctactagaacactctggtgatcgca-ttggttgatgttaatgaattttggagatgtttgagtatgaaatcatgtgaatgtatataacatgtgg 23580427  T
Q  349 aatgaaattgatgtatgtgcataattataattaattgggcatgttctggattgttggaagtgtggggttgtaagtcatatgaaacatatgta-tggttga 447  Q
    ||||  | ||||||||| |||||||||||| | |||| | |||| |||||||||| ||  || || || |||||| |||||||| ||||||| | || ||    
T  23580428 aatgtgaatgatgtatgcgcataattataaatgattgtgtatgtgctggattgtttgagttgcggagtagtaagttatatgaaatatatgtattagtgga 23580527  T
Q  448 gttgtatgtagatatacacaggtt 471  Q
    ||||||||| ||||||||| ||||    
T  23580528 gttgtatgtggatatacacgggtt 23580551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 75 - 179
Target Start/End: Complemental strand, 21907848 - 21907744
Alignment:
Q  75 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 174  Q
    |||||| ||||||| |||||| ||||| |||||||||||||||| ||||||||||||| ||||||||||||||  ||||||||||||||||||| |||||    
T  21907848 aaccgttagcgagcggaaccccaactttctgtaagccggtcgcttaagcgaactagccatcgcttaagcgaagatgaccttagtcagccactttttgaac 21907749  T
Q  175 tttgc 179  Q
    |||||    
T  21907748 tttgc 21907744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 75 - 189
Target Start/End: Original strand, 23102036 - 23102150
Alignment:
Q  75 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 174  Q
    |||||||||||||| ||||||| ||||||||||||||| || || ||||||||| | ||||||||||||||||| ||||||||||||||||||| |||||    
T  23102036 aaccgtaagcgagcagaacccagacttactgtaagccgatcacttaagcgaactggacgtcgcttaagcgaagttgaccttagtcagccactttttgaac 23102135  T
Q  175 tttgctttgtgcatt 189  Q
     |||| | |||||||    
T  23102136 gttgcctcgtgcatt 23102150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 66 - 205
Target Start/End: Complemental strand, 29281475 - 29281336
Alignment:
Q  66 ccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccac 165  Q
    |||||||| | |||||||||| ||||||||| || |||||||||| ||||||| ||||||||||||||||||||||||||| ||    ||||||||||      
T  29281475 ccgtgagcgacccgtaagcgaactgaacccagacctactgtaagctggtcgcttaagcgaactagccgtcgcttaagcgaactgagtgttagtcagcctt 29281376  T
Q  166 tttctgaactttgctttgtgcattgaggggaccttttgag 205  Q
    ||||||||| |||||| ||||| | ||||  |||||||||    
T  29281375 tttctgaaccttgcttcgtgcactaagggatccttttgag 29281336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 35 - 143
Target Start/End: Complemental strand, 10086 - 9978
Alignment:
Q  35 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 134  Q
    |||||||||| ||  | |||||| |||||| |||||||| | |||||||||| ||||||||| || |||||||||| ||||||| |||||||||||||||    
T  10086 tttgattctgccaagaattcgcttaagcgagccgtgagcgacccgtaagcgaactgaacccagacctactgtaagctggtcgcttaagcgaactagccgt 9987  T
Q  135 cgcttaagc 143  Q
    |||||||||    
T  9986 cgcttaagc 9978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 90 - 246
Target Start/End: Complemental strand, 24661032 - 24660876
Alignment:
Q  90 gaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcatt 189  Q
    |||||| ||||| |||| ||||||||||| |||||| | ||||||||||||||| |||  |  |||||||||||||||| |||| ||| ||| ||||| |    
T  24661032 gaaccccaactttctgtgagccggtcgcttaagcgagccagccgtcgcttaagcaaagaaggtcttagtcagccactttttgaattttacttcgtgcact 24660933  T
Q  190 gagggga-ccttttgagcattctaaaatatctctttcaacttatataatccttgtata 246  Q
     |||||| ||||||||||||| |||||| | ||||||||||| ||||| | |||||||    
T  24660932 -aggggatccttttgagcattttaaaatgtttctttcaacttgtataacctttgtata 24660876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 25181446 - 25181557
Alignment:
Q  35 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 134  Q
    |||||||||| ||  | |||||| |||||| |||||||| | ||||||| || ||||||||| || |||||||||| ||||||| |||| ||||||||||    
T  25181446 tttgattctgccaagaattcgcttaagcgagccgtgagcgacccgtaagtgaactgaacccagacctactgtaagctggtcgcttaagcaaactagccgt 25181545  T
Q  135 cgcttaagcgaa 146  Q
    ||||||||||||    
T  25181546 cgcttaagcgaa 25181557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 51 - 248
Target Start/End: Complemental strand, 26884701 - 26884503
Alignment:
Q  51 gttcgctcaagcgaaccgtgagcaaaccgtaagcgagct-gaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtg 149  Q
    |||||||||||||||| |||||| |||||| |||||||  |||||  ||| |  |||  || ||||||| |||||| ||| || ||||||||||||| ||    
T  26884701 gttcgctcaagcgaactgtgagctaaccgtgagcgagcgagaacctcaaccttttgtgtgctggtcgcttaagcgagctacccttcgcttaagcgaactg 26884602  T
Q  150 gaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataatccttgtatagg 248  Q
      |||||||||||| |||||||||| |||||| ||||| | |||||| ||||||||| ||| | |||| | ||||| | ||| |||||  ||||||||||    
T  26884601 agccttagtcagcctctttctgaaccttgcttcgtgcact-aggggacccttttgagtatttttaaatgtttcttttagcttgtataactcttgtatagg 26884503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 133 - 236
Target Start/End: Complemental strand, 23264524 - 23264421
Alignment:
Q  133 gtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaactta 231  Q
    |||||||||||||||  ||||||||||||||||||| |||||||||| | ||||| | |||||| ||||||||||||| | |||| |  ||||||||||     
T  23264524 gtcgcttaagcgaagatgaccttagtcagccactttttgaactttgcctcgtgcact-aggggatccttttgagcatttttaaatgttcctttcaacttg 23264426  T
Q  232 tataa 236  Q
    |||||    
T  23264425 tataa 23264421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 409 - 467
Target Start/End: Original strand, 20914263 - 20914321
Alignment:
Q  409 tgtggggttgtaagtcatatgaaacatatgtatggttgagttgtatgtagatatacaca 467  Q
    |||||||||||||||||||| | | ||||| || |||||||||||||||||||||||||    
T  20914263 tgtggggttgtaagtcatattatatatatgcattgttgagttgtatgtagatatacaca 20914321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 23264613 - 23264557
Alignment:
Q  13 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgt 69  Q
    ||||| || ||||||||| |||||| ||| |||||||||||||||||||||||||||    
T  23264613 gaacccgtaagcgaaaaatcattttcattatgtcagaagttcgctcaagcgaaccgt 23264557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 187
Target Start/End: Original strand, 27208318 - 27208408
Alignment:
Q  97 aacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgca 187  Q
    ||||| |||| ||| ||||||| |||||| ||| || ||||||||||||| ||  ||||||||||||  ||||||||| ||| || |||||    
T  27208318 aactttctgtgagctggtcgcttaagcgagctacccttcgcttaagcgaactgagccttagtcagcctttttctgaaccttgtttcgtgca 27208408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 187
Target Start/End: Original strand, 27210653 - 27210743
Alignment:
Q  97 aacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgca 187  Q
    ||||| |||| ||| ||||||| |||||| ||| || ||||||||||||| ||  ||||||||||||  ||||||||| ||| || |||||    
T  27210653 aactttctgtgagctggtcgcttaagcgagctacccttcgcttaagcgaactgagccttagtcagcctttttctgaaccttgtttcgtgca 27210743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 471
Target Start/End: Complemental strand, 200850 - 200822
Alignment:
Q  443 gttgagttgtatgtagatatacacaggtt 471  Q
    |||||||||||||||||||||||||||||    
T  200850 gttgagttgtatgtagatatacacaggtt 200822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 471
Target Start/End: Original strand, 6744292 - 6744320
Alignment:
Q  443 gttgagttgtatgtagatatacacaggtt 471  Q
    |||||||||||||||||||||||||||||    
T  6744292 gttgagttgtatgtagatatacacaggtt 6744320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 471
Target Start/End: Original strand, 27367551 - 27367579
Alignment:
Q  443 gttgagttgtatgtagatatacacaggtt 471  Q
    |||||||||||||||||||||||||||||    
T  27367551 gttgagttgtatgtagatatacacaggtt 27367579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 161; Significance: 1e-85; HSPs: 2)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 82 - 471
Target Start/End: Complemental strand, 3136 - 2747
Alignment:
Q  82 agcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaacttt-gct 180  Q
    |||||||  |||||| || |||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||| |||    
T  3136 agcgagcgaaacccagacctactgtaagccggtcgcttaagcgaactagccgtcgcttaagcgaagtgagccttagtcagcctctttctgaacttttgct 3037  T
Q  181 ttgtgcattgaggggaccttttgagcattctaaaatatctctttcaacttatataatccttgtataggtagcagaaccctacta-aacgctctgatgatc 279  Q
    | |||||  |||||||| | |||||||||||||||||| || || ||||| ||||| ||||||||||||| ||||| || |||| |||   | | |||||    
T  3036 tcgtgcac-gaggggacttcttgagcattctaaaatatttcctttaacttgtataacccttgtataggtaccagaatcccactagaacaagccggtgatc 2938  T
Q  280 gaatttggttgatgttagtaaattttggagatgactgagtatgaaatcaagtgattatatattacattgaatgaaattgatgtatgtgcataattataat 379  Q
    ||||| ||||||||||||| ||| |||||||||| ||||| |||||||| |||| |||||| |  |||||||||| |||||||||| ||||||||||||     
T  2937 gaatt-ggttgatgttagtgaatattggagatgattgagtttgaaatcatgtgaatatataatt-attgaatgaatttgatgtatgcgcataattataaa 2840  T
Q  380 taattgggcatgttctggattgttggaagtgtggggttgtaagtcatatgaaacatatgta-tggttgagttgtatgtagatatacacaggtt 471  Q
    ||||||   ||||||||||||||| ||  || || || ||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  2839 taattgtctatgttctggattgtttgagttgcggagtagtaagtcatatgaaacatatgtattagttgagttgtatgtagatatacacaggtt 2747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 87
Target Start/End: Complemental strand, 3217 - 3181
Alignment:
Q  51 gttcgctcaagcgaaccgtgagcaaaccgtaagcgag 87  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  3217 gttcgcttaagcgaaccgtgagcgaaccgtaagcgag 3181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 160; Significance: 4e-85; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 19 - 471
Target Start/End: Original strand, 29614738 - 29615195
Alignment:
Q  19 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgct 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||| ||||||||    
T  29614738 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaacccgtaagcgagctgaacccagacctactgtaagtcggtcgct 29614837  T
Q  119 caagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac-tttgctttgtgcattgaggggaccttttgagcattctaaaata 217  Q
     ||||||||||||||||||||||||||||||  ||||||||||||   |||||||| |||| || ||||| |||||| || | |||||||||||| ||||    
T  29614838 taagcgaactagccgtcgcttaagcgaagtgagccttagtcagcc---ttctgaacttttgtttcgtgca-tgagggaacttcttgagcattctataata 29614933  T
Q  218 tctctttcaacttatataatccttgtataggtagcagaaccctacta-aacgctctgatgatcgaatttggttgatgttagtaaattttggagatgactg 316  Q
    | || || ||||  ||||| ||| | ||||||| ||||| | || || ||||  | | |||| ||| ||| ||| ||||||||||| |||||||||| ||    
T  29614934 tttcctttaactagtataaccctggcataggtaacagaatcttattagaacgagccggtgattgaa-ttgattggtgttagtaaatgttggagatgattg 29615032  T
Q  317 agtatgaaatcaagtga------ttatatattaca--ttgaatgaaattgatgtatgtgcataattataattaattgggcatgttctggattgttggaag 408  Q
    ||||||||| |||||||       ||||||| |||  | |||||  ||||||||||||| |||||||||| |||||| | ||||||||||||||| ||      
T  29615033 agtatgaaaacaagtgaatatgtgtatatataacatgtggaatgtgattgatgtatgtgaataattataaataattgtgtatgttctggattgtt-gagt 29615131  T
Q  409 tgtggggttgtaagtcatatgaaacatatgt-atggttgagttgtatgtagatatacacaggtt 471  Q
    || || |  |||||||||||||||||||||| || || ||||||||||||||||||||||||||    
T  29615132 tgcggagcagtaagtcatatgaaacatatgtaatagtcgagttgtatgtagatatacacaggtt 29615195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 16 - 211
Target Start/End: Complemental strand, 12167832 - 12167637
Alignment:
Q  16 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggt 114  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| ||| |||||||||| |||    
T  12167832 cctgtgagcgaaaaaccattttcattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagaacctactgtaagctggt 12167733  T
Q  115 cgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggaccttttgagcattct 211  Q
    |||| |||||||||||||||||||||||||||||| |||||| ||||||  |||||||||| |||||| ||||| ||||||||| | |||||| ||||    
T  12167732 cgcttaagcgaactagccgtcgcttaagcgaagtgaaccttaatcagcc-ttttctgaactgttgcttagtgca-tgaggggacttcttgagcgttct 12167637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 16 - 211
Target Start/End: Complemental strand, 19286741 - 19286546
Alignment:
Q  16 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggt 114  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| ||| |||||||||| |||    
T  19286741 cctgtgagcgaaaaaccattttcattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagaacctactgtaagctggt 19286642  T
Q  115 cgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggaccttttgagcattct 211  Q
    |||| |||||||||||||||||||||||||||||| |||||| ||||||  |||||||||| |||||| ||||| ||||||||| | |||||| ||||    
T  19286641 cgcttaagcgaactagccgtcgcttaagcgaagtgaaccttaatcagcc-ttttctgaactgttgcttagtgca-tgaggggacttcttgagcgttct 19286546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 18 - 211
Target Start/End: Complemental strand, 19877923 - 19877730
Alignment:
Q  18 tgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggtcg 116  Q
    |||||||||||||||||||| ||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| ||| |||||||||| |||||    
T  19877923 tgtgagcgaaaaaccattttcattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagaacctactgtaagctggtcg 19877824  T
Q  117 ctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggaccttttgagcattct 211  Q
    || |||||||||||||||||||||||||||||| |||||| ||||||  |||||||||| |||||| ||||| ||||||||| | |||||| ||||    
T  19877823 cttaagcgaactagccgtcgcttaagcgaagtgaaccttaatcagcc-ttttctgaactgttgcttagtgca-tgaggggacttcttgagcgttct 19877730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 16 - 211
Target Start/End: Complemental strand, 19883701 - 19883506
Alignment:
Q  16 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggt 114  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| ||| |||||||||| |||    
T  19883701 cctgtgagcgaaaaaccattttcattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagaacctactgtaagctggt 19883602  T
Q  115 cgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggaccttttgagcattct 211  Q
    |||| |||||||||||||||||||||||||||||| |||||| | ||||  |||||||||| |||||| ||||| ||||||||| | |||||| ||||    
T  19883601 cgcttaagcgaactagccgtcgcttaagcgaagtgaaccttaattagcc-ttttctgaactgttgcttagtgca-tgaggggacttcttgagcgttct 19883506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 34640575 - 34640723
Alignment:
Q  16 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggt 114  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| | |||||||||| |||| |||| | | |||||||||| |||    
T  34640575 cctgtgagcgaaaaaccattttgattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgagcccagagcctactgtaagctggt 34640674  T
Q  115 cgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagcc 163  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||    
T  34640675 cgcttaagcgaactagccgtcgcttaagcgaagtgaaccttagtcagcc 34640723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 34647249 - 34647397
Alignment:
Q  16 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggt 114  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| | |||||||||| |||| |||| | | |||||||||| |||    
T  34647249 cctgtgagcgaaaaaccattttgattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgagcccagagcctactgtaagctggt 34647348  T
Q  115 cgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagcc 163  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||    
T  34647349 cgcttaagcgaactagccgtcgcttaagcgaagtgaaccttagtcagcc 34647397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 211
Target Start/End: Original strand, 19786455 - 19786650
Alignment:
Q  16 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggt 114  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||| | ||||||||||  |||||||| ||| |||||||||| |||    
T  19786455 cctgtgagcgaaaaaccattttcattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaagtgaacccagaacctactgtaagctggt 19786554  T
Q  115 cgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggaccttttgagcattct 211  Q
    |||| |||||||||||||||||||||||||||||| |||||| ||||||  |||||||||| ||||||  |||| ||||||||| | |||||| ||||    
T  19786555 cgcttaagcgaactagccgtcgcttaagcgaagtgaaccttaatcagcc-ttttctgaactgttgcttaatgca-tgaggggacttcttgagcgttct 19786650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 16 - 176
Target Start/End: Original strand, 25470290 - 25470451
Alignment:
Q  16 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggt 114  Q
    |||||||||||||||||||||||||||||||  || |||||||||||||||||||||| | |||||||||| |||| |||| ||| |||||||||  |||    
T  25470290 cctgtgagcgaaaaaccattttgattctgtccaaaattcgctcaagcgaaccgtgagcgacccgtaagcgaactgagcccagaacctactgtaagttggt 25470389  T
Q  115 cgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactt 176  Q
    |||| ||||||||||| |||||||||||||||||| |||||||||||||  |||||||||||    
T  25470390 cgcttaagcgaactagacgtcgcttaagcgaagtgaaccttagtcagcctttttctgaactt 25470451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 21365067 - 21365195
Alignment:
Q  18 tgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgc 117  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| || |||||||||  ||||||    
T  21365067 tgtgagcgaaaaaccattttgattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagacctactgtaagttggtcgc 21365166  T
Q  118 tcaagcgaactagccgtcgcttaagcgaa 146  Q
    | |||||| ||||||||||||||||||||    
T  21365167 ttaagcgagctagccgtcgcttaagcgaa 21365195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 23969049 - 23969177
Alignment:
Q  18 tgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgc 117  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| || |||||||||  ||||||    
T  23969049 tgtgagcgaaaaaccattttgattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagacctactgtaagttggtcgc 23969148  T
Q  118 tcaagcgaactagccgtcgcttaagcgaa 146  Q
    | |||||| ||||||||||||||||||||    
T  23969149 ttaagcgagctagccgtcgcttaagcgaa 23969177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 75 - 241
Target Start/End: Complemental strand, 18799920 - 18799754
Alignment:
Q  75 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 174  Q
    |||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||| |||||    
T  18799920 aaccgtaagcgagcggaacccagacttactgtaagccggtcgcttaagcgaactagccgtcgcttaagcgaagtcaaccttagtcagccactttttgaac 18799821  T
Q  175 tttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataatcctt 241  Q
    ||||| |  |||||| |||||| |||||| ||||||| || || |  |||||||||| ||||| ||||    
T  18799820 tttgcctcatgcatt-aggggaccctttttagcattcaaacatgttcctttcaacttgtataaccctt 18799754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 75 - 390
Target Start/End: Complemental strand, 25396654 - 25396340
Alignment:
Q  75 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 174  Q
    |||||| ||||||| |||||| ||||  ||||||| |||||||| |||||| | |||||||||||||||||||| |  |||||||| ||||||| ||||     
T  25396654 aaccgttagcgagcggaaccccaactctctgtaagtcggtcgcttaagcgagccagccgtcgcttaagcgaagtaggtcttagtcaaccactttttgaat 25396555  T
Q  175 tttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataatccttgtataggtagcagaaccctact-aaacgctct 272  Q
    | ||||| ||||| | |||| | |||||||||||||||||||| | ||||||||||| ||||| ||||||||| | | | ||| |||||| |||| |  |    
T  25396554 tatgcttagtgcact-agggaatccttttgagcattctaaaatgtttctttcaacttgtataacccttgtatatgca-ctgaatcctactgaaacacatt 25396457  T
Q  273 gatgatcgaatttggttgatgttagtaaattttggagatgactgagtatgaaatcaagtgattatatattacattgaatgaaattgatgtatgtgcataa 372  Q
    | | |||||| ||||||||  ||||| ||||||||| |||| ||||||||||| ||||||| |||||| ||  ||||||||| |||||| ||  | || |    
T  25396456 ggtaatcgaa-ttggttgaatttagtgaattttggatatgattgagtatgaaaccaagtgaatatatactaggttgaatgaacttgatgcattagtatga 25396358  T
Q  373 ttataattaattgggcat 390  Q
    |||| |||||||| ||||    
T  25396357 ttattattaattgtgcat 25396340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 75 - 209
Target Start/End: Original strand, 21565765 - 21565899
Alignment:
Q  75 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 174  Q
    |||||||||||||| ||||||| ||||||||||||||||||||| ||||||||| | ||||||||||||||||| ||||||||||||||||||| |||||    
T  21565765 aaccgtaagcgagcagaacccagacttactgtaagccggtcgcttaagcgaactggacgtcgcttaagcgaagttgaccttagtcagccactttttgaac 21565864  T
Q  175 tttgctttgtgcattgagggga-ccttttgagcatt 209  Q
     |||| | ||||||| ||| || |||||||||||||    
T  21565865 gttgcctcgtgcatt-aggagacccttttgagcatt 21565899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 355 - 470
Target Start/End: Complemental strand, 12167535 - 12167420
Alignment:
Q  355 attgatgtatgtgcataattataattaattgggcatgttctggattgttggaagtgtggggttgtaagtcatatgaaacatatgta-tggttgagttgta 453  Q
    |||||||||||||||||||||||| |||||| | | | ||||||||||| ||  ||||| || ||||||||||||| ||||||||| |||| ||||||||    
T  12167535 attgatgtatgtgcataattataaataattgtgtaag-tctggattgtttgagttgtggagtagtaagtcatatgatacatatgtagtggtcgagttgta 12167437  T
Q  454 tgtagatatacacaggt 470  Q
    |||||||||||||||||    
T  12167436 tgtagatatacacaggt 12167420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 355 - 470
Target Start/End: Complemental strand, 19877628 - 19877513
Alignment:
Q  355 attgatgtatgtgcataattataattaattgggcatgttctggattgttggaagtgtggggttgtaagtcatatgaaacatatgta-tggttgagttgta 453  Q
    |||||||||||||||||||||||| |||||| | | | ||||||||||| ||  ||||| || ||||||||||||| ||||||||| |||| ||||||||    
T  19877628 attgatgtatgtgcataattataaataattgtgtaag-tctggattgtttgagttgtggagtagtaagtcatatgatacatatgtagtggtcgagttgta 19877530  T
Q  454 tgtagatatacacaggt 470  Q
    |||||||||||||||||    
T  19877529 tgtagatatacacaggt 19877513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 355 - 470
Target Start/End: Complemental strand, 19883404 - 19883289
Alignment:
Q  355 attgatgtatgtgcataattataattaattgggcatgttctggattgttggaagtgtggggttgtaagtcatatgaaacatatgta-tggttgagttgta 453  Q
    |||||||||||||||||||||||| |||||| | | | ||||||||||| ||  ||||| || ||||||||||||| ||||||||| |||| ||||||||    
T  19883404 attgatgtatgtgcataattataaataattgtgtaag-tctggattgtttgagttgtggagtagtaagtcatatgatacatatgtagtggtcgagttgta 19883306  T
Q  454 tgtagatatacacaggt 470  Q
    |||||||||||||||||    
T  19883305 tgtagatatacacaggt 19883289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 46 - 236
Target Start/End: Original strand, 19471891 - 19472080
Alignment:
Q  46 cagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcga 145  Q
    |||||||||||| ||||||||||  ||| | |||| ||||||| |||||| ||||| |||| ||||||||||| |||||| | |||| ||||||||||||    
T  19471891 cagaagttcgcttaagcgaaccgcaagcgagccgttagcgagcggaaccccaactttctgtgagccggtcgcttaagcgagccagccatcgcttaagcga 19471990  T
Q  146 agtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataa 236  Q
    ||  |  ||| |||||||||||| |||| ||||||| ||||| | |||||| ||||||||||||| | |||| | || |||||||| |||||    
T  19471991 agaaggtctt-gtcagccactttttgaattttgcttcgtgcact-aggggatccttttgagcattttgaaatgtttccttcaacttgtataa 19472080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 20008493 - 20008604
Alignment:
Q  35 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 134  Q
    |||||||||| ||  | |||||| |||||| |||||||| | |||||||||| ||||||||| || |||||||||| ||||||| |||||||||||||||    
T  20008493 tttgattctgccaagaattcgcttaagcgagccgtgagcgacccgtaagcgaactgaacccagacctactgtaagctggtcgcttaagcgaactagccgt 20008592  T
Q  135 cgcttaagcgaa 146  Q
     |||||||||||    
T  20008593 tgcttaagcgaa 20008604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 355 - 470
Target Start/End: Complemental strand, 19286444 - 19286329
Alignment:
Q  355 attgatgtatgtgcataattataattaattgggcatgttctggattgttggaagtgtggggttgtaagtcatatgaaacatatgta-tggttgagttgta 453  Q
    |||||||||||||||||||||||| |||||| | | | ||||||||||| ||  ||||| || ||||||||||| | ||||||||| |||| ||||||||    
T  19286444 attgatgtatgtgcataattataaataattgtgtaag-tctggattgtttgagttgtggagtagtaagtcatattatacatatgtagtggtcgagttgta 19286346  T
Q  454 tgtagatatacacaggt 470  Q
    |||||||||||||||||    
T  19286345 tgtagatatacacaggt 19286329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 355 - 470
Target Start/End: Original strand, 19786751 - 19786866
Alignment:
Q  355 attgatgtatgtgcataattataattaattgggcatgttctggattgttggaagtgtggggttgtaagtcatatgaaacatatgta-tggttgagttgta 453  Q
    |||||||||||||||||||||||| |||||| | | | ||||||||||| ||  | ||| || ||||||||||||| ||||||||| | || ||||||||    
T  19786751 attgatgtatgtgcataattataaataattgtgtaag-tctggattgtttgagttatggagtagtaagtcatatgatacatatgtagtagtcgagttgta 19786849  T
Q  454 tgtagatatacacaggt 470  Q
    |||||||||||||||||    
T  19786850 tgtagatatacacaggt 19786866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 209
Target Start/End: Complemental strand, 9186903 - 9186827
Alignment:
Q  133 gtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcatt 209  Q
    |||||||||||||||  ||||||||||||||||||| |||||||||||| ||||| | |||||| |||||||||||||    
T  9186903 gtcgcttaagcgaagatgaccttagtcagccactttttgaactttgcttcgtgcact-aggggatccttttgagcatt 9186827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 248
Target Start/End: Original strand, 19300317 - 19300495
Alignment:
Q  70 gagcaaaccgtaagcgagct-gaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccacttt 168  Q
    |||| |||||| |||||||  ||| |||||||| ||||| || ||||||| |||||| ||| || ||||||||||||  ||  |||||||||||| || |    
T  19300317 gagcgaaccgtgagcgagcgagaatccaaacttcctgta-gctggtcgcttaagcgagctacccttcgcttaagcgagatgagccttagtcagcctctat 19300415  T
Q  169 ctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataatccttgtatagg 248  Q
    ||||||||||||| ||||| | |||||| ||||||||| ||| | || | | ||||| | ||| ||||| |||||||||||    
T  19300416 ctgaactttgcttcgtgcact-aggggacccttttgagtatttttaagtgtttcttttagcttgtataacccttgtatagg 19300495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 230
Target Start/End: Original strand, 24513456 - 24513553
Alignment:
Q  133 gtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaactt 230  Q
    |||||||||||||||  ||||||||||||||||||| ||||| |||| | ||||| | |||||| ||||||||||||| | |||| |  ||||||||||    
T  24513456 gtcgcttaagcgaagatgaccttagtcagccactttttgaaccttgcctcgtgcact-aggggatccttttgagcatttttaaatgttcctttcaactt 24513553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 467
Target Start/End: Complemental strand, 19439921 - 19439888
Alignment:
Q  434 atatgtatggttgagttgtatgtagatatacaca 467  Q
    ||||||||||||||||||||||||||||||||||    
T  19439921 atatgtatggttgagttgtatgtagatatacaca 19439888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 24513370 - 24513423
Alignment:
Q  16 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgt 69  Q
    ||||| ||||||||| |||||| |||||  ||||||||||||||||||||||||    
T  24513370 cctgtaagcgaaaaatcattttcattcttccagaagttcgctcaagcgaaccgt 24513423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 23105440 - 23105384
Alignment:
Q  409 tgtggggttgtaagtcatatgaaacatatgtatggttgagttgtatgtagatataca 465  Q
    |||||||||||||||||||| | | ||||| || ||| |||||||||||||||||||    
T  23105440 tgtggggttgtaagtcatattatatatatgcattgttcagttgtatgtagatataca 23105384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 82 - 126
Target Start/End: Original strand, 24513425 - 24513469
Alignment:
Q  82 agcgagctgaacccaaacttactgtaagccggtcgctcaagcgaa 126  Q
    ||||||| |||||||||||| |||| ||||||||||| |||||||    
T  24513425 agcgagcggaacccaaactttctgtgagccggtcgcttaagcgaa 24513469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 471
Target Start/End: Complemental strand, 24562491 - 24562463
Alignment:
Q  443 gttgagttgtatgtagatatacacaggtt 471  Q
    |||||||||||||||||||||||||||||    
T  24562491 gttgagttgtatgtagatatacacaggtt 24562463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 158; Significance: 7e-84; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 158; E-Value: 7e-84
Query Start/End: Original strand, 13 - 467
Target Start/End: Complemental strand, 18914646 - 18914193
Alignment:
Q  13 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccg 112  Q
    ||||| || ||||||||| || ||  |||||| |||||||||||| ||| ||||||  ||| |||| | ||||||| |||||| ||||  || |||||||    
T  18914646 gaacccgtaagcgaaaaatcaattccattctgccagaagttcgcttaagtgaaccgcaagcgaacctttagcgagcggaaccccaactctctataagccg 18914547  T
Q  113 gtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaacttt-gctttgtgcattgagggga-ccttttgagcattc 210  Q
    |||||| ||||||||  ||| ||||||||||||||  ||||||||||||||||||| |||| ||| || | ||||||| |||||| ||||||||||||      
T  18914546 gtcgcttaagcgaacctgccatcgcttaagcgaagatgaccttagtcagccacttt-tgaatttttgcctcgtgcatt-aggggatccttttgagcatat 18914449  T
Q  211 taaaatatctctttcaacttatataatccttgtataggtagcagaaccctactaaa-cgctctgatgatcgaatttggttgatgttagtaaattttggag 309  Q
     | ||||| |||| |||||| ||||| | || ||||   | || || ||||||||| | ||||  |||| ||||| | ||||||||||| ||||||||||    
T  18914448 aataatatttcttccaacttgtataacctttatatataca-cataatcctactaaaacactctattgatggaattag-ttgatgttagtgaattttggag 18914351  T
Q  310 atgactgagtatgaaatcaagtgattatatattacattgaatgaaattgatgtatgtgcataattataattaattgggcatgttctggattgttggaagt 409  Q
    |||| ||||||||||||||||||| |||||||||  |||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||| |    
T  18914350 atgattgagtatgaaatcaagtgaatatatattatgttgaatgaaattgatgtatgagcataattataattaattgtgtatgttctggattgttggaatt 18914251  T
Q  410 gtggggttgtaagtcatatgaaacatatgtatggttgagttgtatgtagatatacaca 467  Q
    | || ||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  18914250 gcggagttgtaagtcatatgaaacatatgtattgttaagttgtatgtagatatacaca 18914193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 19 - 470
Target Start/End: Original strand, 41455687 - 41456142
Alignment:
Q  19 gtgagcgaaaaacca--ttttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggtc 115  Q
    |||||||||||||||  |||||||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| ||| |||||||||| ||||    
T  41455687 gtgagcgaaaaaccaatttttgattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagaacctactgtaagctggtc 41455786  T
Q  116 gctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggaccttttgagcattc-taa 213  Q
    ||| |||||||||||||||||||||||||||||| |||||||||||||  |||||||||| |||||| ||||| ||||||||| |  ||||| ||| | |    
T  41455787 gcttaagcgaactagccgtcgcttaagcgaagtgaaccttagtcagcctttttctgaactgttgcttagtgca-tgaggggacttcctgagcgttcttta 41455885  T
Q  214 aatatctctttcaacttatataatccttgtataggtagcagaaccctacta-aacgctctgatgatcgaatttggttgatgttagtaaattttggagatg 312  Q
    | |  |||||| ||||| ||||||||| ||||||||| ||||| ||||||| |||   |||   |||||| ||| ||| ||||||||||| ||||||||     
T  41455886 acttcctcttt-aacttgtataatcctagtataggtatcagaatcctactagaacaagctggcaatcgaa-ttgattggtgttagtaaatgttggagata 41455983  T
Q  313 actgagtatgaa-atcaagtgattatatattac-attgaatgaaattgatgtatgtgcataattataattaattgggcatgttctggattgttggaagtg 410  Q
    | |||||| ||| || ||||||  |||||  || ||||||||||||||||||| | |||||||||||| |||||| | |||||||| |||||| ||  |     
T  41455984 attgagtaggaagattaagtga--atatacaactattgaatgaaattgatgtaagcgcataattataaataattgtgaatgttctgaattgtttgagtta 41456081  T
Q  411 tggggttgtaagtcatatgaaacatatgta-tggttgagttgtatgtagatatacacaggt 470  Q
     || || ||||||||||||||||||||| | | ||||||||||||||||||||||||||||    
T  41456082 cggagtagtaagtcatatgaaacatatgcattagttgagttgtatgtagatatacacaggt 41456142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 19 - 165
Target Start/End: Complemental strand, 24192418 - 24192272
Alignment:
Q  19 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgct 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||| |||||||||||||||||||||    
T  24192418 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcgaaccgtaagtgagttgaacccagacttactgtaagccggtcgct 24192319  T
Q  119 caagcgaactagccgtcgcttaagcgaagtggaccttagtcagccac 165  Q
     ||||||||||||||||||||||||||||||||||||||||||||||    
T  24192318 taagcgaactagccgtcgcttaagcgaagtggaccttagtcagccac 24192272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 75 - 209
Target Start/End: Original strand, 16802041 - 16802175
Alignment:
Q  75 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 174  Q
    |||||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||||| ||||||||||| ||||||||| ||||||||| |||||    
T  16802041 aaccgtaagcgagcagaacccagacttactgtaagccggtcgcttaagcgagctagccgtcgtttaagcgaagttgaccttagttagccactttttgaac 16802140  T
Q  175 tttgctttgtgcattgagggga-ccttttgagcatt 209  Q
    ||||| |  |||||| |||||| |||||||||||||    
T  16802141 tttgcctcatgcatt-aggggacccttttgagcatt 16802175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 77 - 250
Target Start/End: Original strand, 13324376 - 13324549
Alignment:
Q  77 ccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactt 176  Q
    |||| |||||||  ||||||||||| ||| ||||| |||||| |||||| | |||| ||||||||||||  ||  |||||||||||||||||||||| ||    
T  13324376 ccgtcagcgagcaaaacccaaactttctgcaagccagtcgcttaagcgagccagccttcgcttaagcgagctgagccttagtcagccactttctgaattt 13324475  T
Q  177 tgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataatccttgtataggta 250  Q
    ||||| ||||||| |||||| |||||||||||||| || || | ||||||| ||||||||| |||||||||||||    
T  13324476 tgcttcgtgcatt-aggggacccttttgagcattcaaagatgtttctttcagcttatataacccttgtataggta 13324549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 75 - 179
Target Start/End: Original strand, 55499700 - 55499804
Alignment:
Q  75 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 174  Q
    |||||||||||||| ||||| | ||||||||||||||||||||| ||||||||||| ||||||||||||||||| || |||||||||||||||| |||||    
T  55499700 aaccgtaagcgagcagaacctagacttactgtaagccggtcgcttaagcgaactagacgtcgcttaagcgaagttgatcttagtcagccactttttgaac 55499799  T
Q  175 tttgc 179  Q
     ||||    
T  55499800 gttgc 55499804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 133 - 250
Target Start/End: Original strand, 13302844 - 13302961
Alignment:
Q  133 gtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaactta 231  Q
    |||||||||||||  ||  |||||||||||||||||||||| ||||||| ||||||| |||||| |||||||||||||| || || | ||||||| ||||    
T  13302844 gtcgcttaagcgagctgagccttagtcagccactttctgaattttgcttcgtgcatt-aggggacccttttgagcattcaaagatgtttctttcagctta 13302942  T
Q  232 tataatccttgtataggta 250  Q
    ||||| |||||||||||||    
T  13302943 tataacccttgtataggta 13302961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 52 - 205
Target Start/End: Complemental strand, 14865338 - 14865184
Alignment:
Q  52 ttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccg-tcgcttaagcgaagtgg 150  Q
    |||||| |||||| |||||||| | |||||||||| ||||||||| || |||| ||||| ||||||| |||||||||||||| ||||||||||||| ||     
T  14865338 ttcgcttaagcgagccgtgagcgacccgtaagcgaactgaacccagacctactctaagctggtcgcttaagcgaactagccgttcgcttaagcgaactga 14865239  T
Q  151 accttagtcagccactttctgaactttgctttgtgcattgaggggaccttttgag 205  Q
       ||||||||||  ||||||||| |||||| ||||| | ||||  |||||||||    
T  14865238 gtgttagtcagcctttttctgaaccttgcttcgtgcactaagggatccttttgag 14865184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 13 - 129
Target Start/End: Original strand, 17241085 - 17241201
Alignment:
Q  13 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccg 112  Q
    ||||| || ||||||||| || ||| ||||||||||||||||||||||||||||||  ||| |||||| ||||||| |||||| ||||  || |||| ||    
T  17241085 gaacccgtaagcgaaaaatcaatttcattctgtcagaagttcgctcaagcgaaccgcaagcgaaccgtcagcgagcggaaccccaactctctataagtcg 17241184  T
Q  113 gtcgctcaagcgaacta 129  Q
    |||||| ||||||||||    
T  17241185 gtcgcttaagcgaacta 17241201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 133 - 250
Target Start/End: Original strand, 13313520 - 13313637
Alignment:
Q  133 gtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaactta 231  Q
    |||||||||||||  ||  |||||||||||||||||||||| ||||||| ||||||| |||||| |||||||||||||  || || | ||||||| ||||    
T  13313520 gtcgcttaagcgagctgagccttagtcagccactttctgaattttgcttcgtgcatt-aggggacccttttgagcatttaaagatgtttctttcagctta 13313618  T
Q  232 tataatccttgtataggta 250  Q
    ||||| |||||||||||||    
T  13313619 tataacccttgtataggta 13313637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 346 - 406
Target Start/End: Original strand, 18136117 - 18136177
Alignment:
Q  346 ttgaatgaaattgatgtatgtgcataattataattaattgggcatgttctggattgttgga 406  Q
    |||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||    
T  18136117 ttgaatgaaattgatgtatgagcataattataattaattgtgtatgttctggattgttgga 18136177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 10390034 - 10390104
Alignment:
Q  17 ctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaac-cgtgagcaaaccgtaagcga 86  Q
    ||||||||||||||||||||||||||||||  || |||||||||||||||  |||||| |||||| |||||    
T  10390034 ctgtgagcgaaaaaccattttgattctgtccaaatttcgctcaagcgaacttgtgagcgaaccgtgagcga 10390104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 10415123 - 10415193
Alignment:
Q  17 ctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaac-cgtgagcaaaccgtaagcga 86  Q
    ||||||||||||||||||||||||||||||  || |||||||||||||||  |||||| |||||| |||||    
T  10415123 ctgtgagcgaaaaaccattttgattctgtccaaatttcgctcaagcgaacttgtgagcgaaccgtgagcga 10415193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 10421793 - 10421863
Alignment:
Q  17 ctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaac-cgtgagcaaaccgtaagcga 86  Q
    ||||||||||||||||||||||||||||||  || |||||||||||||||  |||||| |||||| |||||    
T  10421793 ctgtgagcgaaaaaccattttgattctgtccaaatttcgctcaagcgaacttgtgagcgaaccgtgagcga 10421863  T

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Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 409 - 467
Target Start/End: Original strand, 13036915 - 13036973
Alignment:
Q  409 tgtggggttgtaagtcatatgaaacatatgtatggttgagttgtatgtagatatacaca 467  Q
    |||||||||||||||||||| | | ||||| || |||||||||||||||||||||||||    
T  13036915 tgtggggttgtaagtcatattatatatatgcattgttgagttgtatgtagatatacaca 13036973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 17243260 - 17243343
Alignment:
Q  125 aactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcatt 209  Q
    |||||||| ||||||||||||||  ||||||||||||||||||| |||||||||| | ||||| | |||||| |||||||||||||    
T  17243260 aactagccatcgcttaagcgaagatgaccttagtcagccacttt-tgaactttgcctcgtgcact-aggggatccttttgagcatt 17243343  T

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Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 415 - 467
Target Start/End: Original strand, 18136253 - 18136306
Alignment:
Q  415 gttgtaagtcatatgaaa-catatgtatggttgagttgtatgtagatatacaca 467  Q
    |||||||||||||||||| |||||| |||||| |||||||||||||||||||||    
T  18136253 gttgtaagtcatatgaaaacatatgcatggttaagttgtatgtagatatacaca 18136306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 406
Target Start/End: Original strand, 18129607 - 18129663
Alignment:
Q  350 atgaaattgatgtatgtgcataattataattaattgggcatgttctggattgttgga 406  Q
    |||||||||||||| | ||||||||||||||||||| | |||||||| |||||||||    
T  18129607 atgaaattgatgtacgagcataattataattaattgtgaatgttctgaattgttgga 18129663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 409 - 467
Target Start/End: Original strand, 18129733 - 18129792
Alignment:
Q  409 tgtggggttgtaagtcatatgaaaca-tatgtatggttgagttgtatgtagatatacaca 467  Q
    ||||| |||||||||||||||||| | |||| |||||| |||||||||||||||||||||    
T  18129733 tgtggagttgtaagtcatatgaaaaaatatgcatggttaagttgtatgtagatatacaca 18129792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 467
Target Start/End: Original strand, 31690553 - 31690586
Alignment:
Q  434 atatgtatggttgagttgtatgtagatatacaca 467  Q
    ||||||||||||||||||||||||||||||||||    
T  31690553 atatgtatggttgagttgtatgtagatatacaca 31690586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 467
Target Start/End: Complemental strand, 31943662 - 31943629
Alignment:
Q  434 atatgtatggttgagttgtatgtagatatacaca 467  Q
    ||||||||||||||||||||||||||||||||||    
T  31943662 atatgtatggttgagttgtatgtagatatacaca 31943629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 471
Target Start/End: Original strand, 13968801 - 13968829
Alignment:
Q  443 gttgagttgtatgtagatatacacaggtt 471  Q
    |||||||||||||||||||||||||||||    
T  13968801 gttgagttgtatgtagatatacacaggtt 13968829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 471
Target Start/End: Original strand, 13974276 - 13974304
Alignment:
Q  443 gttgagttgtatgtagatatacacaggtt 471  Q
    |||||||||||||||||||||||||||||    
T  13974276 gttgagttgtatgtagatatacacaggtt 13974304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 471
Target Start/End: Complemental strand, 14084740 - 14084712
Alignment:
Q  443 gttgagttgtatgtagatatacacaggtt 471  Q
    |||||||||||||||||||||||||||||    
T  14084740 gttgagttgtatgtagatatacacaggtt 14084712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 471
Target Start/End: Complemental strand, 14090141 - 14090113
Alignment:
Q  443 gttgagttgtatgtagatatacacaggtt 471  Q
    |||||||||||||||||||||||||||||    
T  14090141 gttgagttgtatgtagatatacacaggtt 14090113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 471
Target Start/End: Original strand, 24123171 - 24123199
Alignment:
Q  443 gttgagttgtatgtagatatacacaggtt 471  Q
    |||||||||||||||||||||||||||||    
T  24123171 gttgagttgtatgtagatatacacaggtt 24123199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 471
Target Start/End: Complemental strand, 49399682 - 49399654
Alignment:
Q  443 gttgagttgtatgtagatatacacaggtt 471  Q
    |||||||||||||||||||||||||||||    
T  49399682 gttgagttgtatgtagatatacacaggtt 49399654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 135; Significance: 4e-70; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 19 - 165
Target Start/End: Original strand, 14977 - 15123
Alignment:
Q  19 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgct 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  14977 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcgaaccgtaagcgagctgaacccagacttactgtaagccggtcgct 15076  T
Q  119 caagcgaactagccgtcgcttaagcgaagtggaccttagtcagccac 165  Q
     ||||||||||||||||||||||||||||||||||||||||||||||    
T  15077 taagcgaactagccgtcgcttaagcgaagtggaccttagtcagccac 15123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 1e-51; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 19 - 250
Target Start/End: Complemental strand, 13743174 - 13742945
Alignment:
Q  19 gtgagcgaaaaaccatttt-gattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgc 117  Q
    ||||||||||||| ||||| |||||||||  ||||||||||||||||||||||||| | |||||||||||||||||||| || |||| ||||||||||||    
T  13743174 gtgagcgaaaaacaatttttgattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgagctgaacccagacctactataagccggtcgc 13743075  T
Q  118 tcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac-tttgctttgtgcattgaggggaccttttgagcattctaaaat 216  Q
    | ||||||||||||||||||||||||||||||  ||||||||||||   |||||||| |||| || ||||| ||||||||| | |||||||||||| |||    
T  13743074 ttaagcgaactagccgtcgcttaagcgaagtgagccttagtcagcc---ttctgaacttttgtttcgtgca-tgaggggacttcttgagcattctataat 13742979  T
Q  217 atctctttcaacttatataatccttgtataggta 250  Q
    || ||||| ||||  ||||| ||| || ||||||    
T  13742978 atttcttttaactagtataaccctggtgtaggta 13742945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 16 - 211
Target Start/End: Complemental strand, 13006901 - 13006706
Alignment:
Q  16 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggt 114  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| ||| |||||||||| |||    
T  13006901 cctgtgagcgaaaaaccattttcattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagaacctactgtaagctggt 13006802  T
Q  115 cgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggaccttttgagcattct 211  Q
    |||| |||||||||||||||||||||||||||||| |||||| ||||||  |||||||||| |||||| ||||| ||||||||| | |||||| ||||    
T  13006801 cgcttaagcgaactagccgtcgcttaagcgaagtgaaccttaatcagcc-ttttctgaactgttgcttagtgca-tgaggggacttcttgagcgttct 13006706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 13123506 - 13123698
Alignment:
Q  19 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgct 118  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| || |||||||||  |||||||    
T  13123506 gtgagcgaaaaaccattttgattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagacctactgtaagttggtcgct 13123605  T
Q  119 caagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggaccttttgagcattcta 212  Q
     |||||| |||||||||||||||||||||||   |||||||||||  |||||||||| || ||| ||||| ||||||||| | ||||||||||||    
T  13123606 taagcgagctagccgtcgcttaagcgaagtgagtcttagtcagcc-ttttctgaactattacttagtgca-tgaggggacttcttgagcattcta 13123698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 16 - 162
Target Start/End: Original strand, 12591230 - 12591377
Alignment:
Q  16 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggt 114  Q
    |||||||||||||||||||||||||||||||  || |||||||||||||||||||||| | |||||||||| |||| |||| | | |||||||||| |||    
T  12591230 cctgtgagcgaaaaaccattttgattctgtccaaatttcgctcaagcgaaccgtgagcgacccgtaagcgaactgatcccagatcctactgtaagctggt 12591329  T
Q  115 cgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagc 162  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||    
T  12591330 cgcttaagcgaactagccgtcgcttaagcgaagtgaaccttagtcagc 12591377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 13 - 236
Target Start/End: Complemental strand, 13678995 - 13678772
Alignment:
Q  13 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccg 112  Q
    ||||| || ||||||||| |||||  ||||||||||||||||||| ||||||||||  ||| || ||| ||||||   ||||| ||||  ||||||||||    
T  13678995 gaacccgtaagcgaaaaatcatttccattctgtcagaagttcgcttaagcgaaccgcaagcgaaacgttagcgagggaaaccccaactctctgtaagccg 13678896  T
Q  113 gtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattct 211  Q
    |||||| |||||||| |||||||||||||||||||  ||||||||||||||||||| |||||||||| | ||||||| |||||| |||||||||||||      
T  13678895 gtcgcttaagcgaaccagccgtcgcttaagcgaagatgaccttagtcagccactttttgaactttgcctcgtgcatt-aggggatccttttgagcattaa 13678797  T
Q  212 aaaatatctctttcaacttatataa 236  Q
    ||||| | |||||||| || |||||    
T  13678796 aaaatgtttctttcaatttgtataa 13678772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 13 - 209
Target Start/End: Complemental strand, 16676845 - 16676660
Alignment:
Q  13 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccg 112  Q
    |||||||| ||||||||||||||||||||||||||  | |||||||||||||||| |           |||||||| ||||||| |||||||||||||||    
T  16676845 gaacctgtaagcgaaaaaccattttgattctgtcaagaattcgctcaagcgaaccat-----------aagcgagcggaacccagacttactgtaagccg 16676757  T
Q  113 gtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgaggggacc-ttttgagcatt 209  Q
    |||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| | ||||||| |||||||| |||||||||||    
T  16676756 gtcgcttaagcgaactagtcgtcgcttaagcgaagttgaccttagtcagccactttttgaacgttgcctcgtgcatt-aggggacccttttgagcatt 16676660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 13 - 209
Target Start/End: Complemental strand, 17651081 - 17650896
Alignment:
Q  13 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccg 112  Q
    |||||||| ||||||||||||||||||||||||||  | |||||||||||||||| |           |||||||| ||||||| |||||||||||||||    
T  17651081 gaacctgtaagcgaaaaaccattttgattctgtcaagaattcgctcaagcgaaccat-----------aagcgagcggaacccagacttactgtaagccg 17650993  T
Q  113 gtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgaggggacc-ttttgagcatt 209  Q
    |||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| | ||||||| |||||||| |||||||||||    
T  17650992 gtcgcttaagcgaactagtcgtcgcttaagcgaagttgaccttagtcagccactttttgaacgttgcctcgtgcatt-aggggacccttttgagcatt 17650896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 12710435 - 12710627
Alignment:
Q  19 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgct 118  Q
    |||||| |||||||||||||||||||||  ||||||||||||||||||||||||| | | |||||||| ||||||||| || |||||||||  |||||||    
T  12710435 gtgagccaaaaaccattttgattctgtccaaagttcgctcaagcgaaccgtgagcgacctgtaagcgaactgaacccagacctactgtaagttggtcgct 12710534  T
Q  119 caagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggaccttttgagcattcta 212  Q
     |||||| |||||||||||||||||||||||   |||||||||||  |||||||||| || ||| ||||| ||||||||| | ||||||||||||    
T  12710535 taagcgagctagccgtcgcttaagcgaagtgagtcttagtcagcc-ttttctgaactattacttagtgca-tgaggggacttcttgagcattcta 12710627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 3857953 - 3858082
Alignment:
Q  18 tgtgagcgaaaaaccatttt-gattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcg 116  Q
    |||||||||||||||||||| ||||||||   ||||||||||||||||||||||||| | |||||||||| ||||||||| || |||||||||  |||||    
T  3857953 tgtgagcgaaaaaccatttttgattctgttcaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagacctactgtaagttggtcg 3858052  T
Q  117 ctcaagcgaactagccgtcgcttaagcgaa 146  Q
    || |||||| ||||||||||||||||||||    
T  3858053 cttaagcgagctagccgtcgcttaagcgaa 3858082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 75 - 179
Target Start/End: Original strand, 11389922 - 11390026
Alignment:
Q  75 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 174  Q
    |||||||||||||| ||||||| ||||||||| || |||||||| |||||| |||||||||||||||||||||  ||||||||||||||||||| |||||    
T  11389922 aaccgtaagcgagcggaacccagacttactgtgagtcggtcgcttaagcgagctagccgtcgcttaagcgaagatgaccttagtcagccactttttgaac 11390021  T
Q  175 tttgc 179  Q
    |||||    
T  11390022 tttgc 11390026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 35 - 179
Target Start/End: Original strand, 20311597 - 20311740
Alignment:
Q  35 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 134  Q
    |||||||||| ||  | |||||| ||||||||||  ||| |||||||||||||| ||||||| |||||||| |||||||||||| |||||| ||||||||    
T  20311597 tttgattctgccaagaattcgcttaagcgaaccgcaagcgaaccgtaagcgagcagaacccagacttactgcaagccggtcgcttaagcgagctagccgt 20311696  T
Q  135 cgcttaagcgaagtggaccttagtcagccactttctgaactttgc 179  Q
    |||||||||||||  ||||| ||| ||||||||| ||||||||||    
T  20311697 cgcttaagcgaagatgacctcagttagccacttt-tgaactttgc 20311740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 41 - 230
Target Start/End: Complemental strand, 46625464 - 46625275
Alignment:
Q  41 tctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgctta 140  Q
    |||| |||||||||||| |||||||||| ||||||||| | ||||||| |||| | ||||  |||||||| ||||||| |||||| | ||||||||||||    
T  46625464 tctgccagaagttcgcttaagcgaaccgcgagcaaaccattagcgagcagaacgccaactctctgtaagcaggtcgcttaagcgagccagccgtcgctta 46625365  T
Q  141 agcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaactt 230  Q
    |||||||| |  |||||||||||||| | |||| |||| || ||||| | |||| | ||||||||||||| |||||| | |||||||||||    
T  46625364 agcgaagtaggtcttagtcagccactctttgaattttgtttcgtgcact-agggaatccttttgagcattttaaaatgtttctttcaactt 46625275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 35 - 146
Target Start/End: Complemental strand, 2464874 - 2464763
Alignment:
Q  35 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 134  Q
    ||||||||||||  |||||||| |||||||||||||||| | |||||||||| ||||||||| || |||||||||  ||||||| |||||| ||||||||    
T  2464874 tttgattctgtccaaagttcgcccaagcgaaccgtgagcgacccgtaagcgaactgaacccagacctactgtaagttggtcgcttaagcgagctagccgt 2464775  T
Q  135 cgcttaagcgaa 146  Q
    ||||||||||||    
T  2464774 cgcttaagcgaa 2464763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 81 - 179
Target Start/End: Original strand, 11383440 - 11383538
Alignment:
Q  81 aagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgc 179  Q
    |||||||| ||||||| ||||||||| |||| |||||| |||||| |||||||||||||||||||||  ||||||||||||||||||| ||||||||||    
T  11383440 aagcgagcggaacccagacttactgtgagcctgtcgcttaagcgagctagccgtcgcttaagcgaagatgaccttagtcagccactttttgaactttgc 11383538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 355 - 471
Target Start/End: Complemental strand, 13742803 - 13742686
Alignment:
Q  355 attgatgtatgtgcataattataattaattgggcatgttctggattgttggaagtgtggggttgtaagtcatatgaaacatatgt-atggttgagttgta 453  Q
    ||||||||||| |||||||||||| |||||| | ||||||||||||||| ||  ||||| || |||||||||||||||||||||| || || ||||||||    
T  13742803 attgatgtatgagcataattataaataattgtgtatgttctggattgtttgagttgtggagtagtaagtcatatgaaacatatgtaatagtcgagttgta 13742704  T
Q  454 tgtagatatacacaggtt 471  Q
    ||| ||||||||||||||    
T  13742703 tgttgatatacacaggtt 13742686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 35 - 205
Target Start/End: Complemental strand, 16090595 - 16090425
Alignment:
Q  35 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 134  Q
    |||||||||| ||  | |||||| |||| | |||||||| | |||||||||| ||||||||| || |||||||||  ||||||| |||||| ||||||||    
T  16090595 tttgattctgccaagaattcgcttaagcaagccgtgagcgacccgtaagcgaactgaacccagacctactgtaagatggtcgcttaagcgagctagccgt 16090496  T
Q  135 cgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgaggggaccttttgag 205  Q
    |||||||||||| ||    ||||||||||  ||||||||| |||||| ||||| | ||||  |||||||||    
T  16090495 cgcttaagcgaactgagtgttagtcagcctttttctgaaccttgcttcgtgcactaagggatccttttgag 16090425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 355 - 471
Target Start/End: Original strand, 13123851 - 13123967
Alignment:
Q  355 attgatgtatgtgcataattataattaattgggcatgttctggattgttggaagtgtggggttgtaagtcatatgaaacatatgta-tggttgagttgta 453  Q
    |||||||||||||||||||||||| |||||| | |||||||| ||||| | |  ||||| ||  |||||||||||||| ||||||| | |||||||||||    
T  13123851 attgatgtatgtgcataattataaataattgtgtatgttctgaattgtcg-agttgtggagtattaagtcatatgaaatatatgtagtagttgagttgta 13123949  T
Q  454 tgtagatatacacaggtt 471  Q
    ||||||||||||||||||    
T  13123950 tgtagatatacacaggtt 13123967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 355 - 470
Target Start/End: Complemental strand, 13006604 - 13006489
Alignment:
Q  355 attgatgtatgtgcataattataattaattgggcatgttctggattgttggaagtgtggggttgtaagtcatatgaaacatatgta-tggttgagttgta 453  Q
    |||||||||||||||||||||||| |||||| | | | ||||||||||| ||  ||||| || ||||||||||| | ||||||||| |||| ||||||||    
T  13006604 attgatgtatgtgcataattataaataattgtgtaag-tctggattgtttgagttgtggagtagtaagtcatattatacatatgtagtggtcgagttgta 13006506  T
Q  454 tgtagatatacacaggt 470  Q
    |||||||||||||||||    
T  13006505 tgtagatatacacaggt 13006489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 35 - 207
Target Start/End: Original strand, 29181654 - 29181826
Alignment:
Q  35 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 134  Q
    |||||||||| ||  |||||||| |||||| |||||||| | || ||||||| ||||||||| || |||||||||  ||||||| |||||| ||||||||    
T  29181654 tttgattctgccaagagttcgcttaagcgagccgtgagcgacccataagcgaactgaacccagacctactgtaagatggtcgcttaagcgagctagccgt 29181753  T
Q  135 cgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgaggggaccttttgagca 207  Q
    ||||||||| || ||    |||||||| |  ||||||||| |||||| ||||| | ||||  |||||||||||    
T  29181754 cgcttaagcaaactgagtgttagtcagtctttttctgaaccttgcttcgtgcactaagggatccttttgagca 29181826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 355 - 471
Target Start/End: Original strand, 12710780 - 12710896
Alignment:
Q  355 attgatgtatgtgcataattataattaattgggcatgttctggattgttggaagtgtggggttgtaagtcatatgaaacatatgta-tggttgagttgta 453  Q
    |||||||||||||||||||||||| |||||| | |||||||| ||||| | |  | ||| ||  |||||||||||||| ||||||| | |||||||||||    
T  12710780 attgatgtatgtgcataattataaataattgtgtatgttctgaattgtcg-agttatggagtattaagtcatatgaaatatatgtagtagttgagttgta 12710878  T
Q  454 tgtagatatacacaggtt 471  Q
    ||||||||||||||||||    
T  12710879 tgtagatatacacaggtt 12710896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 51 - 174
Target Start/End: Original strand, 14320192 - 14320316
Alignment:
Q  51 gttcgctcaagcgaaccgtgagcaaaccgtaagcgagct-gaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtg 149  Q
    ||||||||||||||||||||||| ||| || |||||||  | |||  ||||| |||| ||||||||||| |||||| ||| || ||||||||||||| ||    
T  14320192 gttcgctcaagcgaaccgtgagcgaactgtgagcgagcgaggacctcaactttctgtgagccggtcgcttaagcgagctacccttcgcttaagcgaactg 14320291  T
Q  150 gaccttagtcagccactttctgaac 174  Q
      ||||||||||||  |||||||||    
T  14320292 agccttagtcagcctttttctgaac 14320316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 75 - 179
Target Start/End: Original strand, 21231571 - 21231674
Alignment:
Q  75 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 174  Q
    |||||| ||||||| |||||| ||||| |||| ||| ||||||| |||| |||| | ||||||||||||||||  |||||| |||||||||||| |||||    
T  21231571 aaccgtcagcgagcggaaccccaactttctgtgagctggtcgcttaagcaaactggtcgtcgcttaagcgaagatgacctttgtcagccacttt-tgaac 21231669  T
Q  175 tttgc 179  Q
    |||||    
T  21231670 tttgc 21231674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 409 - 467
Target Start/End: Complemental strand, 12694835 - 12694777
Alignment:
Q  409 tgtggggttgtaagtcatatgaaacatatgtatggttgagttgtatgtagatatacaca 467  Q
    |||||||||||||||||||| | | ||||| || |||||||||||||||||||||||||    
T  12694835 tgtggggttgtaagtcatattatatatatgcattgttgagttgtatgtagatatacaca 12694777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 467
Target Start/End: Complemental strand, 15142448 - 15142390
Alignment:
Q  409 tgtggggttgtaagtcatatgaaacatatgtatggttgagttgtatgtagatatacaca 467  Q
    |||||||||||||||||||| | | ||||| || || ||||||||||||||||||||||    
T  15142448 tgtggggttgtaagtcatattatatatatgcattgtggagttgtatgtagatatacaca 15142390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 467
Target Start/End: Complemental strand, 1612842 - 1612809
Alignment:
Q  434 atatgtatggttgagttgtatgtagatatacaca 467  Q
    ||||||||||||||||||||||||||||||||||    
T  1612842 atatgtatggttgagttgtatgtagatatacaca 1612809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 467
Target Start/End: Original strand, 14945802 - 14945856
Alignment:
Q  415 gttgtaagtcatatgaaa--catatgtatggttgagttgtatgtagatatacaca 467  Q
    ||||||||||||||||||  |||||| || ||| |||||||||||||||||||||    
T  14945802 gttgtaagtcatatgaaaaacatatgcattgtttagttgtatgtagatatacaca 14945856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 467
Target Start/End: Original strand, 15373395 - 15373449
Alignment:
Q  415 gttgtaagtcatatgaaa--catatgtatggttgagttgtatgtagatatacaca 467  Q
    ||||||||||||||||||  |||||| || ||| |||||||||||||||||||||    
T  15373395 gttgtaagtcatatgaaaaacatatgcattgtttagttgtatgtagatatacaca 15373449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 409 - 467
Target Start/End: Original strand, 16073896 - 16073954
Alignment:
Q  409 tgtggggttgtaagtcatatgaaacatatgtatggttgagttgtatgtagatatacaca 467  Q
    |||||||| ||||||||||| | | ||||| |  |||||||||||||||||||||||||    
T  16073896 tgtggggtggtaagtcatattatatatatgcactgttgagttgtatgtagatatacaca 16073954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 413 - 467
Target Start/End: Original strand, 16476067 - 16476121
Alignment:
Q  413 gggttgtaagtcatatgaaacatatgtatggttgagttgtatgtagatatacaca 467  Q
    |||||||||||||||| | | ||||| || | |||||||||||||||||||||||    
T  16476067 gggttgtaagtcatattatatatatgcattgatgagttgtatgtagatatacaca 16476121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 471
Target Start/End: Complemental strand, 4280172 - 4280144
Alignment:
Q  443 gttgagttgtatgtagatatacacaggtt 471  Q
    |||||||||||||||||||||||||||||    
T  4280172 gttgagttgtatgtagatatacacaggtt 4280144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 13679030 - 13678982
Alignment:
Q  39 attctgtcagaagttcgctcaagcgaaccgtgagc-aaaccgtaagcga 86  Q
    ||||||||||| | ||||||||||||||||||||| || ||||||||||    
T  13679030 attctgtcagacgctcgctcaagcgaaccgtgagcgaacccgtaagcga 13678982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 471
Target Start/End: Complemental strand, 19616504 - 19616476
Alignment:
Q  443 gttgagttgtatgtagatatacacaggtt 471  Q
    |||||||||||||||||||||||||||||    
T  19616504 gttgagttgtatgtagatatacacaggtt 19616476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 2e-50; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 16 - 211
Target Start/End: Complemental strand, 23528099 - 23527904
Alignment:
Q  16 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggt 114  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| ||| |||||||||| |||    
T  23528099 cctgtgagcgaaaaaccattttcattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagaacctactgtaagctggt 23528000  T
Q  115 cgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggaccttttgagcattct 211  Q
    |||| |||||||||||||||||||||||||||||| |||||| ||||||  |||||||||| |||||| ||||| ||||||||| | |||||| ||||    
T  23527999 cgcttaagcgaactagccgtcgcttaagcgaagtgaaccttaatcagcc-ttttctgaactgttgcttagtgca-tgaggggacttcttgagcgttct 23527904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 39 - 179
Target Start/End: Original strand, 18408491 - 18408631
Alignment:
Q  39 attctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgct 138  Q
    |||||| |||||||||||| ||||||  ||  ||| |||||| ||||||| |||||| ||||| |||||||||||||||| |||| ||||||||||||||    
T  18408491 attctgccagaagttcgcttaagcgagtcgcaagcgaaccgttagcgagcggaaccccaactttctgtaagccggtcgcttaagcaaactagccgtcgct 18408590  T
Q  139 taagcgaagtggaccttagtcagccactttctgaactttgc 179  Q
    ||||||||   ||||||||||||||||||| ||||||||||    
T  18408591 taagcgaaaatgaccttagtcagccactttttgaactttgc 18408631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 28889925 - 28890053
Alignment:
Q  18 tgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgc 117  Q
    ||||||||||||||||||||| |||||||  |||||||| ||||||| |||||||| | |||||||||| ||||||||| || |||||||||  ||||||    
T  28889925 tgtgagcgaaaaaccattttgtttctgtccaaagttcgcccaagcgagccgtgagcgacccgtaagcgaactgaacccagacctactgtaagttggtcgc 28890024  T
Q  118 tcaagcgaactagccgtcgcttaagcgaa 146  Q
    | ||||||  |||||||||||||||||||    
T  28890025 ttaagcgagatagccgtcgcttaagcgaa 28890053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 28896629 - 28896757
Alignment:
Q  18 tgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgc 117  Q
    ||||||||||||||||||||| |||||||  |||||||| ||||||| |||||||| | |||||||||| ||||||||| || |||||||||  ||||||    
T  28896629 tgtgagcgaaaaaccattttgtttctgtccaaagttcgcccaagcgagccgtgagcgacccgtaagcgaactgaacccagacctactgtaagttggtcgc 28896728  T
Q  118 tcaagcgaactagccgtcgcttaagcgaa 146  Q
    | ||||||  |||||||||||||||||||    
T  28896729 ttaagcgagatagccgtcgcttaagcgaa 28896757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 28909877 - 28910005
Alignment:
Q  18 tgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgc 117  Q
    ||||||||||||||||||||| |||||||  |||||||| ||||||| |||||||| | |||||||||| ||||||||| || |||||||||  ||||||    
T  28909877 tgtgagcgaaaaaccattttgtttctgtccaaagttcgcccaagcgagccgtgagcgacccgtaagcgaactgaacccagacctactgtaagttggtcgc 28909976  T
Q  118 tcaagcgaactagccgtcgcttaagcgaa 146  Q
    | ||||||  |||||||||||||||||||    
T  28909977 ttaagcgagatagccgtcgcttaagcgaa 28910005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 28931569 - 28931697
Alignment:
Q  18 tgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgc 117  Q
    ||||||||||||||||||||| |||||||  |||||||| ||||||| |||||||| | |||||||||| ||||||||| || |||||||||  ||||||    
T  28931569 tgtgagcgaaaaaccattttgtttctgtccaaagttcgcccaagcgagccgtgagcgacccgtaagcgaactgaacccagacctactgtaagttggtcgc 28931668  T
Q  118 tcaagcgaactagccgtcgcttaagcgaa 146  Q
    | ||||||  |||||||||||||||||||    
T  28931669 ttaagcgagatagccgtcgcttaagcgaa 28931697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 28946272 - 28946400
Alignment:
Q  18 tgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgc 117  Q
    ||||||||||||||||||||| |||||||  |||||||| ||||||| |||||||| | |||||||||| ||||||||| || |||||||||  ||||||    
T  28946272 tgtgagcgaaaaaccattttgtttctgtccaaagttcgcccaagcgagccgtgagcgacccgtaagcgaactgaacccagacctactgtaagttggtcgc 28946371  T
Q  118 tcaagcgaactagccgtcgcttaagcgaa 146  Q
    | ||||||  |||||||||||||||||||    
T  28946372 ttaagcgagatagccgtcgcttaagcgaa 28946400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 35 - 146
Target Start/End: Complemental strand, 19236410 - 19236299
Alignment:
Q  35 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 134  Q
    |||||||||| ||  | |||||| |||||| |||||||| | || ||||||| ||||||||| || |||||||||| ||||||| |||||||||||||||    
T  19236410 tttgattctgccaagaattcgcttaagcgagccgtgagcgacccataagcgaactgaacccagacctactgtaagctggtcgcttaagcgaactagccgt 19236311  T
Q  135 cgcttaagcgaa 146  Q
    ||||||||||||    
T  19236310 cgcttaagcgaa 19236299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 35 - 144
Target Start/End: Complemental strand, 22467290 - 22467181
Alignment:
Q  35 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 134  Q
    |||||||||| ||  | |||||| |||||| |||||||| | || ||||||| ||||||||| || |||||||||| ||||| | |||||||||||||||    
T  22467290 tttgattctgccaagaattcgcttaagcgagccgtgagcgacccataagcgaactgaacccagacctactgtaagctggtcggttaagcgaactagccgt 22467191  T
Q  135 cgcttaagcg 144  Q
    ||||||||||    
T  22467190 cgcttaagcg 22467181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 355 - 470
Target Start/End: Complemental strand, 23527747 - 23527632
Alignment:
Q  355 attgatgtatgtgcataattataattaattgggcatgttctggattgttggaagtgtggggttgtaagtcatatgaaacatatgta-tggttgagttgta 453  Q
    |||||||||||||||||||||||| |||||| |   || ||||||| || ||  ||||| || ||||||||||||| ||||||||| |||| ||||||||    
T  23527747 attgatgtatgtgcataattataaataattgtgtcagt-ctggattatttgagttgtggagtagtaagtcatatgatacatatgtagtggtcgagttgta 23527649  T
Q  454 tgtagatatacacaggt 470  Q
    |||||||||||||||||    
T  23527648 tgtagatatacacaggt 23527632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 35 - 146
Target Start/End: Complemental strand, 22460666 - 22460555
Alignment:
Q  35 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 134  Q
    |||||||||| ||  | |||||| |||||| |||||||  | || |||||||  |||||||| || |||||||||| ||||||| |||||||||||||||    
T  22460666 tttgattctgccaagaattcgcttaagcgagccgtgagtgacccataagcgaattgaacccagacctactgtaagctggtcgcttaagcgaactagccgt 22460567  T
Q  135 cgcttaagcgaa 146  Q
    ||||||||||||    
T  22460566 cgcttaagcgaa 22460555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 406
Target Start/End: Original strand, 22232436 - 22232496
Alignment:
Q  346 ttgaatgaaattgatgtatgtgcataattataattaattgggcatgttctggattgttgga 406  Q
    |||||||||||||||||||| ||||||||||||||||| | | ||||||||||||||||||    
T  22232436 ttgaatgaaattgatgtatgagcataattataattaatcgtgtatgttctggattgttgga 22232496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 28933070 - 28933200
Alignment:
Q  18 tgtgagcgaaaaacca-ttttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaa-cccaaacttactgtaagccggtc 115  Q
    |||||||||||||||| ||||| |||||||  ||||||||  |||||| |||||||| | |||||||||| ||||| |||| || |||||||||  ||||    
T  28933070 tgtgagcgaaaaaccatttttgtttctgtccaaagttcgccaaagcgagccgtgagcgacccgtaagcgaactgaaccccagacctactgtaagttggtc 28933169  T
Q  116 gctcaagcgaactagccgtcgcttaagcgaa 146  Q
    | | ||||||  ||||||| |||||||||||    
T  28933170 gtttaagcgagatagccgtggcttaagcgaa 28933200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 20819689 - 20819618
Alignment:
Q  16 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaac-cgtgagcaaaccgtaagcga 86  Q
    |||||||||||||||||||||||||||||||  || |||||||||||||||  |||||| |||||| |||||    
T  20819689 cctgtgagcgaaaaaccattttgattctgtccaaatttcgctcaagcgaacttgtgagcgaaccgtgagcga 20819618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 86
Target Start/End: Complemental strand, 20826789 - 20826718
Alignment:
Q  16 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaac-cgtgagcaaaccgtaagcga 86  Q
    |||||||||||||||||||||||||||||||  || |||||||||||||||  |||||| |||||| |||||    
T  20826789 cctgtgagcgaaaaaccattttgattctgtccaaatttcgctcaagcgaacttgtgagcgaaccgtgagcga 20826718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 187
Target Start/End: Complemental strand, 34829578 - 34829441
Alignment:
Q  51 gttcgctcaagcgaaccgtgagcaaaccgtaagcgagct-gaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtg 149  Q
    |||||||||||||||| | |||| |||||| || ||||  |||||| ||| |  ||| ||| ||||||| |||||| ||| || ||||||||||||| ||    
T  34829578 gttcgctcaagcgaactgcgagcgaaccgtgagtgagcgagaaccccaaccttttgtgagctggtcgcttaagcgagctacccttcgcttaagcgaactg 34829479  T
Q  150 gaccttagtcagccactttctgaactttgctttgtgca 187  Q
      ||||||||| ||  |||||||||||||||| |||||    
T  34829478 agccttagtcaacctttttctgaactttgcttcgtgca 34829441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 467
Target Start/End: Complemental strand, 10035359 - 10035305
Alignment:
Q  413 gggttgtaagtcatatgaaacatatgtatggttgagttgtatgtagatatacaca 467  Q
    |||||||||||||||| | | ||||| || |||||||||||||||||||||||||    
T  10035359 gggttgtaagtcatattatatatatgcattgttgagttgtatgtagatatacaca 10035305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 467
Target Start/End: Original strand, 21901795 - 21901849
Alignment:
Q  413 gggttgtaagtcatatgaaacatatgtatggttgagttgtatgtagatatacaca 467  Q
    |||||||||||||||| | | ||||| || |||||||||||||||||||||||||    
T  21901795 gggttgtaagtcatattatatatatgcattgttgagttgtatgtagatatacaca 21901849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 414 - 467
Target Start/End: Complemental strand, 18819149 - 18819096
Alignment:
Q  414 ggttgtaagtcatatgaaacatatgtatggttgagttgtatgtagatatacaca 467  Q
    ||||||||||||||| | | ||||| || |||||||||||||||||||||||||    
T  18819149 ggttgtaagtcatattatatatatgcattgttgagttgtatgtagatatacaca 18819096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 22439322 - 22439370
Alignment:
Q  75 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagc 123  Q
    |||| ||||||||| ||||||| ||||||||||||||||||||| ||||    
T  22439322 aaccttaagcgagcagaacccagacttactgtaagccggtcgcttaagc 22439370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 413 - 467
Target Start/End: Original strand, 21869484 - 21869538
Alignment:
Q  413 gggttgtaagtcatatgaaacatatgtatggttgagttgtatgtagatatacaca 467  Q
    ||||| |||||||||| | | ||||| || |||||||||||||||||||||||||    
T  21869484 gggttataagtcatattatatatatgcattgttgagttgtatgtagatatacaca 21869538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 413 - 467
Target Start/End: Original strand, 21873764 - 21873818
Alignment:
Q  413 gggttgtaagtcatatgaaacatatgtatggttgagttgtatgtagatatacaca 467  Q
    ||||| |||||||||| | | ||||| || |||||||||||||||||||||||||    
T  21873764 gggttataagtcatattatatatatgcattgttgagttgtatgtagatatacaca 21873818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 418 - 467
Target Start/End: Original strand, 22232575 - 22232625
Alignment:
Q  418 gtaagtcatatgaaa-catatgtatggttgagttgtatgtagatatacaca 467  Q
    ||||||||||||||| |||||| || ||| |||||||||||||||||||||    
T  22232575 gtaagtcatatgaaaacatatgcattgttaagttgtatgtagatatacaca 22232625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 22439360 - 22439406
Alignment:
Q  133 gtcgcttaagcgaagtggaccttagtcagccactttctgaactttgc 179  Q
    ||||||||||| |||| ||||||||||||||||||| ||||| ||||    
T  22439360 gtcgcttaagcaaagttgaccttagtcagccactttttgaacgttgc 22439406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 409 - 467
Target Start/End: Complemental strand, 25013803 - 25013745
Alignment:
Q  409 tgtggggttgtaagtcatatgaaacatatgtatggttgagttgtatgtagatatacaca 467  Q
    |||||||||||||||||| | | | ||||| || ||| |||||||||||||||||||||    
T  25013803 tgtggggttgtaagtcattttatatatatgcattgttaagttgtatgtagatatacaca 25013745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 471
Target Start/End: Original strand, 1857471 - 1857499
Alignment:
Q  443 gttgagttgtatgtagatatacacaggtt 471  Q
    |||||||||||||||||||||||||||||    
T  1857471 gttgagttgtatgtagatatacacaggtt 1857499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 435 - 467
Target Start/End: Complemental strand, 21624751 - 21624719
Alignment:
Q  435 tatgtatggttgagttgtatgtagatatacaca 467  Q
    ||||||| |||||||||||||||||||||||||    
T  21624751 tatgtattgttgagttgtatgtagatatacaca 21624719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 471
Target Start/End: Original strand, 21675439 - 21675467
Alignment:
Q  443 gttgagttgtatgtagatatacacaggtt 471  Q
    |||||||||||||||||||||||||||||    
T  21675439 gttgagttgtatgtagatatacacaggtt 21675467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 100; Significance: 3e-49; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 18 - 211
Target Start/End: Complemental strand, 41111407 - 41111214
Alignment:
Q  18 tgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggtcg 116  Q
    |||||||||||||||||||| ||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| ||| |||||||||| |||||    
T  41111407 tgtgagcgaaaaaccattttcattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagaacctactgtaagctggtcg 41111308  T
Q  117 ctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggaccttttgagcattct 211  Q
    || |||||||||||||||||||||||||||||| |||||| ||||||  |||||||||| |||||| ||||| ||||||||| | |||||| ||||    
T  41111307 cttaagcgaactagccgtcgcttaagcgaagtgaaccttaatcagcc-ttttctgaactgttgcttagtgca-tgaggggacttcttgagcgttct 41111214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 76 - 177
Target Start/End: Complemental strand, 18712218 - 18712117
Alignment:
Q  76 accgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact 175  Q
    ||||| ||||||| |||||| ||||| |||||||| ||||||| ||||||||||||||||||||||||||||  |||||||||||||||| || ||||||    
T  18712218 accgttagcgagcggaaccccaactttctgtaagctggtcgcttaagcgaactagccgtcgcttaagcgaagatgaccttagtcagccaccttttgaact 18712119  T
Q  176 tt 177  Q
    ||    
T  18712118 tt 18712117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 20858305 - 20858416
Alignment:
Q  35 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 134  Q
    |||||||||| ||  | |||||| |||||| |||||||| | |||||||||| ||||||||| || |||||||||| ||||||| |||||||||||||||    
T  20858305 tttgattctgccaagaattcgcttaagcgagccgtgagcgacccgtaagcgaactgaacccagacctactgtaagctggtcgcttaagcgaactagccgt 20858404  T
Q  135 cgcttaagcgaa 146  Q
    ||||||||||||    
T  20858405 cgcttaagcgaa 20858416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 35 - 146
Target Start/End: Complemental strand, 21705785 - 21705674
Alignment:
Q  35 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 134  Q
    |||||||||| ||  | |||||| |||||| |||||||| | |||||||||| ||||||||| || |||||||||| ||||||| |||||||||||||||    
T  21705785 tttgattctgccaagaattcgcttaagcgagccgtgagcgacccgtaagcgaactgaacccagacctactgtaagctggtcgcttaagcgaactagccgt 21705686  T
Q  135 cgcttaagcgaa 146  Q
    ||||||||||||    
T  21705685 cgcttaagcgaa 21705674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 35 - 146
Target Start/End: Complemental strand, 21710328 - 21710217
Alignment:
Q  35 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 134  Q
    |||||||||| ||  | |||||| |||||| |||||||| |||| ||||||| ||||||||| || |||||||||| ||||||| |||||||||||||||    
T  21710328 tttgattctgccaagaattcgcttaagcgagccgtgagcgaaccataagcgaactgaacccagacctactgtaagctggtcgcttaagcgaactagccgt 21710229  T
Q  135 cgcttaagcgaa 146  Q
    ||||||||||||    
T  21710228 cgcttaagcgaa 21710217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 355 - 470
Target Start/End: Complemental strand, 41111112 - 41110997
Alignment:
Q  355 attgatgtatgtgcataattataattaattgggcatgttctggattgttggaagtgtggggttgtaagtcatatgaaacatatgta-tggttgagttgta 453  Q
    |||||||||||||||||||||||| |||||| | | | ||||||||||| ||  ||||| || ||||||||||||| ||||||||| |||| ||||||||    
T  41111112 attgatgtatgtgcataattataaataattgtgtaag-tctggattgtttgagttgtggagtagtaagtcatatgatacatatgtagtggtcgagttgta 41111014  T
Q  454 tgtagatatacacaggt 470  Q
    |||||||||||||||||    
T  41111013 tgtagatatacacaggt 41110997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 20851678 - 20851789
Alignment:
Q  35 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 134  Q
    |||||||||| ||  | |||||| |||||| |||||||| | || ||||||| ||||||||| || |||||||||| ||||||| |||||||||||||||    
T  20851678 tttgattctgccaagaattcgcttaagcgagccgtgagcgacccataagcgaactgaacccagacctactgtaagctggtcgcttaagcgaactagccgt 20851777  T
Q  135 cgcttaagcgaa 146  Q
    ||||||||||||    
T  20851778 cgcttaagcgaa 20851789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 346 - 406
Target Start/End: Original strand, 20941657 - 20941717
Alignment:
Q  346 ttgaatgaaattgatgtatgtgcataattataattaattgggcatgttctggattgttgga 406  Q
    |||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||    
T  20941657 ttgaatgaaattgatgtatgagcataattataattaattgtgtatgttctggattgttgga 20941717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 41 - 246
Target Start/End: Original strand, 22030298 - 22030504
Alignment:
Q  41 tctgtcagaagttcgctcaagcgaaccgtgagc-aaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgctt 139  Q
    |||| ||||||||||||  |||||||||||||| ||||| | ||||||| |||| | ||||  ||||||||| |||||| |||||| | |||| ||||||    
T  22030298 tctgccagaagttcgcttgagcgaaccgtgagcgaaacccttagcgagcagaacaccaactctctgtaagccagtcgcttaagcgagccagccttcgctt 22030397  T
Q  140 aagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataatc 238  Q
    ||||||||  |  |||||||||||||||| | |  |||||||  |||| | |||  | |||||||||||||||| ||| | ||||||||||| ||||| |    
T  22030398 aagcgaagaaggtcttagtcagccactttttaatttttgcttcttgcact-aggaaatccttttgagcattctataatgtttctttcaacttgtataacc 22030496  T
Q  239 cttgtata 246  Q
     |||||||    
T  22030497 tttgtata 22030504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 133 - 246
Target Start/End: Complemental strand, 11157554 - 11157441
Alignment:
Q  133 gtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaactta 231  Q
    |||||||||||||||  ||||||||||| ||||||| |||||||||| | ||||||| |||||| |||||||||||||  ||||| | |||||||||||     
T  11157554 gtcgcttaagcgaagatgaccttagtcaaccactttttgaactttgcctcgtgcatt-aggggatccttttgagcatttaaaaatgtttctttcaacttg 11157456  T
Q  232 tataatccttgtata 246  Q
    ||||| |||| ||||    
T  11157455 tataacccttatata 11157441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 50 - 187
Target Start/End: Complemental strand, 19961684 - 19961547
Alignment:
Q  50 agttcgctcaagcgaaccgtgagcaaaccgtaagcgagct-gaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagt 148  Q
    ||||||||| |||||||||  ||| |||||| |||||||  ||| |||||||| ||||| || ||||||| |||||| ||| || ||||||||||||  |    
T  19961684 agttcgctcgagcgaaccgcaagcgaaccgtgagcgagcgagaatccaaacttcctgta-gctggtcgcttaagcgagctacccttcgcttaagcgagat 19961586  T
Q  149 ggaccttagtcagccactttctgaactttgctttgtgca 187  Q
    |  |||||||||||| || |||||||||||||| |||||    
T  19961585 gagccttagtcagcctctatctgaactttgcttcgtgca 19961547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 415 - 467
Target Start/End: Original strand, 20941793 - 20941846
Alignment:
Q  415 gttgtaagtcatatgaaa-catatgtatggttgagttgtatgtagatatacaca 467  Q
    |||||||||||||||||| |||||| || ||| |||||||||||||||||||||    
T  20941793 gttgtaagtcatatgaaaacatatgcattgttaagttgtatgtagatatacaca 20941846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 467
Target Start/End: Complemental strand, 21698344 - 21698285
Alignment:
Q  409 tgtggggttgtaagtcatatgaaacatatgtatggttg-agttgtatgtagatatacaca 467  Q
    |||||||||||||||||||| | | ||||| || |||| |||||||||||||||||||||    
T  21698344 tgtggggttgtaagtcatattatatatatgcattgttggagttgtatgtagatatacaca 21698285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 409 - 467
Target Start/End: Complemental strand, 23631203 - 23631145
Alignment:
Q  409 tgtggggttgtaagtcatatgaaacatatgtatggttgagttgtatgtagatatacaca 467  Q
    ||||| |||||||||||||| | | ||||| || ||| |||||||||||||||||||||    
T  23631203 tgtggagttgtaagtcatattatatatatgcattgttaagttgtatgtagatatacaca 23631145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 471
Target Start/End: Complemental strand, 21542265 - 21542237
Alignment:
Q  443 gttgagttgtatgtagatatacacaggtt 471  Q
    |||||||||||||||||||||||||||||    
T  21542265 gttgagttgtatgtagatatacacaggtt 21542237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 471
Target Start/End: Original strand, 42095871 - 42095899
Alignment:
Q  443 gttgagttgtatgtagatatacacaggtt 471  Q
    |||||||||||||||||||||||||||||    
T  42095871 gttgagttgtatgtagatatacacaggtt 42095899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 99; Significance: 1e-48; HSPs: 2)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 19 - 212
Target Start/End: Complemental strand, 644 - 452
Alignment:
Q  19 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgct 118  Q
    ||||||||||||||||||||||||||||  |||||||||||| |||||||||||| | |||||||||| ||||||||| || |||||||||| |||||||    
T  644 gtgagcgaaaaaccattttgattctgtccaaagttcgctcaatcgaaccgtgagcgacccgtaagcgaactgaacccagacctactgtaagctggtcgct 545  T
Q  119 caagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggaccttttgagcattcta 212  Q
     ||||||||||||||||||||||||||||||   |||||||||||  |||||||||| || ||| ||||| ||||||||| | ||||||||||||    
T  544 taagcgaactagccgtcgcttaagcgaagtgagtcttagtcagcc-ttttctgaactattacttagtgca-tgaggggacttcttgagcattcta 452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 355 - 471
Target Start/End: Complemental strand, 269 - 153
Alignment:
Q  355 attgatgtatgtgcataattataattaattgggcatgttctggattgttggaagtgtggggttgtaagtcatatgaaacatatgt-atggttgagttgta 453  Q
    |||||||| ||||||||||||||| |||||| | ||||||||||||||| ||  ||||| || ||||||||||||||| |||||| || |||||||||||    
T  269 attgatgtgtgtgcataattataaataattgtgtatgttctggattgtt-gagctgtggagtagtaagtcatatgaaatatatgtaatagttgagttgta 171  T
Q  454 tgtagatatacacaggtt 471  Q
    ||||||||||||||||||    
T  170 tgtagatatacacaggtt 153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 4e-48; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 16 - 212
Target Start/End: Original strand, 8046420 - 8046616
Alignment:
Q  16 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtc 115  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| || |||| ||||  ||||    
T  8046420 cctgtgagcgaaaaaccattttgattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagacctactataagttggtc 8046519  T
Q  116 gctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggaccttttgagcattcta 212  Q
    ||| |||||| |||| ||||||||||||||||||  ||||||||||||  |||||||||| || ||| ||||| ||||||||| | ||||||||||||    
T  8046520 gcttaagcgagctagacgtcgcttaagcgaagtgagccttagtcagcctttttctgaactgttacttagtgca-tgaggggacttcttgagcattcta 8046616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 16 - 163
Target Start/End: Complemental strand, 53483171 - 53483023
Alignment:
Q  16 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggt 114  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| | |||||||||| |||| |||| | | |||||||||| |||    
T  53483171 cctgtgagcgaaaaaccattttgattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgagcccagagcctactgtaagctggt 53483072  T
Q  115 cgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagcc 163  Q
    |||| ||||||||| |||||||||||||||||||| |||||||||||||    
T  53483071 cgcttaagcgaacttgccgtcgcttaagcgaagtgaaccttagtcagcc 53483023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 35 - 187
Target Start/End: Complemental strand, 11847614 - 11847462
Alignment:
Q  35 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagct-gaacccaaacttactgtaagccggtcgctcaagcgaactagccg 133  Q
    |||||||||| ||  | |||||| ||||||||||||||| | ||||||||||||| ||| |||||||| ||||| |  ||||||| |||||||||| |||    
T  11847614 tttgattctgccaagaattcgcttaagcgaaccgtgagcgacccgtaagcgagctagaatccaaacttcctgta-gttggtcgcttaagcgaactacccg 11847516  T
Q  134 tcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgca 187  Q
    ||||||||||||  ||  |||||||||||| |||||||||||||||||||||||    
T  11847515 tcgcttaagcgagctgagccttagtcagcctctttctgaactttgctttgtgca 11847462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 179
Target Start/End: Complemental strand, 15407608 - 15407454
Alignment:
Q  13 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccg 112  Q
    ||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| |||           |||| ||||| | |||| |||| |||||    
T  15407608 gaacccgtaagcgaaaaaccattttgattctgccagaagttcgctcaagcgaaccgtcagc-----------gagcggaacctagactttctgtgagccg 15407520  T
Q  113 gtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgc 179  Q
    |||||| ||||||||| ||||||||||||||||||  |||| |||||||||||||| ||||||||||    
T  15407519 gtcgcttaagcgaactggccgtcgcttaagcgaagatgaccatagtcagccacttt-tgaactttgc 15407454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 35 - 205
Target Start/End: Original strand, 16147376 - 16147546
Alignment:
Q  35 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 134  Q
    |||||||||| ||  | |||||| |||||| |||||||| | |||||||||| ||||||||| || |||||||||  ||||||| |||||| ||||||||    
T  16147376 tttgattctgccaagaattcgcttaagcgagccgtgagcgacccgtaagcgaactgaacccagacctactgtaagatggtcgcttaagcgagctagccgt 16147475  T
Q  135 cgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgaggggaccttttgag 205  Q
    |||||||||||| ||    ||||||||||  ||||||||| |||||| ||||| | ||||  |||||||||    
T  16147476 cgcttaagcgaactgagtgttagtcagcctttttctgaaccttgcttcgtgcactaagggatccttttgag 16147546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 75 - 166
Target Start/End: Complemental strand, 14486140 - 14486049
Alignment:
Q  75 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccact 166  Q
    |||||| ||||||| |||||||||||  |||||||||||||||| |||||| | |||| ||||||||||||||||  |||||||||||||||    
T  14486140 aaccgtgagcgagcggaacccaaactctctgtaagccggtcgcttaagcgagccagccttcgcttaagcgaagtgagccttagtcagccact 14486049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 41 - 187
Target Start/End: Complemental strand, 13887289 - 13887144
Alignment:
Q  41 tctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgctta 140  Q
    ||||||||||||| ||| |||||||||||| || |||| | ||||||| |||| | ||||  |||||||||||||| | |||||| | ||||||||||||    
T  13887289 tctgtcagaagtttgcttaagcgaaccgtgcgcgaaccattagcgagcagaacgccaactctctgtaagccggtcgtttaagcgagccagccgtcgctta 13887190  T
Q  141 agcgaagtggaccttagtcagccactttctgaactttgctttgtgca 187  Q
    |||||||  |  |||||| ||||||||| |||| ||||||| |||||    
T  13887189 agcgaagaaggtcttagttagccacttt-tgaattttgcttcgtgca 13887144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 41 - 187
Target Start/End: Complemental strand, 13888146 - 13888001
Alignment:
Q  41 tctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgctta 140  Q
    ||||||||||||| ||| |||||||||||| || |||| | ||||||| |||| | ||||  |||||||||||||| | |||||| | ||||||||||||    
T  13888146 tctgtcagaagtttgcttaagcgaaccgtgcgcgaaccattagcgagcagaacgccaactctctgtaagccggtcgtttaagcgagccagccgtcgctta 13888047  T
Q  141 agcgaagtggaccttagtcagccactttctgaactttgctttgtgca 187  Q
    |||||||  |  |||||| ||||||||| |||| ||||||| |||||    
T  13888046 agcgaagaaggtcttagttagccacttt-tgaattttgcttcgtgca 13888001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 41 - 173
Target Start/End: Complemental strand, 15244719 - 15244587
Alignment:
Q  41 tctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgctta 140  Q
    ||||||||||||||||| ||||||||||||||| | || | ||||||| |||| | ||||  |||||||||||||||| ||||||   | ||||||||||    
T  15244719 tctgtcagaagttcgcttaagcgaaccgtgagcgagccattagcgagcggaacgccaactctctgtaagccggtcgcttaagcgagtcaaccgtcgctta 15244620  T
Q  141 agcgaagtggaccttagtcagccactttctgaa 173  Q
    | |||||  |  |||||||||||||||| ||||    
T  15244619 atcgaagaaggtcttagtcagccactttttgaa 15244587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 45 - 168
Target Start/End: Complemental strand, 15307620 - 15307497
Alignment:
Q  45 tcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcg 144  Q
    ||||||||||||| ||||||||||||||| | || | ||||||| |||| | ||||  ||||||| |||||||| |||||| | |||| |||||||||||    
T  15307620 tcagaagttcgcttaagcgaaccgtgagcgagccattagcgagcggaacgccaactctctgtaagtcggtcgcttaagcgagccagccatcgcttaagcg 15307521  T
Q  145 aagtggaccttagtcagccacttt 168  Q
    |||  |  ||||||||||||||||    
T  15307520 aagaaggtcttagtcagccacttt 15307497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 406
Target Start/End: Original strand, 14555881 - 14555941
Alignment:
Q  346 ttgaatgaaattgatgtatgtgcataattataattaattgggcatgttctggattgttgga 406  Q
    |||||||||||||||||||| ||||||||||||||||||| |  |||||||||||||||||    
T  14555881 ttgaatgaaattgatgtatgagcataattataattaattgtgtttgttctggattgttgga 14555941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 471
Target Start/End: Original strand, 8046777 - 8046893
Alignment:
Q  355 attgatgtatgtgcataattataattaattgggcatgttctggattgttggaagtgtggggttgtaagtcatatgaaacatatgta-tggttgagttgta 453  Q
    |||||||| ||||||||||||||| |||||| | ||| | ||||||  || |  ||||| || ||||||||||||||| ||||||| | || ||||||||    
T  8046777 attgatgtgtgtgcataattataaataattgtgtatgatttggattactg-agttgtggagtagtaagtcatatgaaatatatgtaatagtcgagttgta 8046875  T
Q  454 tgtagatatacacaggtt 471  Q
    ||||||||||||||||||    
T  8046876 tgtagatatacacaggtt 8046893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 410 - 467
Target Start/End: Complemental strand, 30237995 - 30237938
Alignment:
Q  410 gtggggttgtaagtcatatgaaacatatgtatggttgagttgtatgtagatatacaca 467  Q
    ||||||||||||||||||| | | ||||| || |||||||||||||||||||||||||    
T  30237995 gtggggttgtaagtcatattatatatatgcattgttgagttgtatgtagatatacaca 30237938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 246
Target Start/End: Complemental strand, 8834385 - 8834185
Alignment:
Q  46 cagaagttcgctcaagcgaaccgtgagcaaaccg-taagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcg 144  Q
    |||||||| |||  |||||||||||||| ||||  | ||||||| |||| | ||||  |||||||||||||||| || | | | |||| |||||||||||    
T  8834385 cagaagtttgcttgagcgaaccgtgagcgaaccccttagcgagcagaacaccaactctctgtaagccggtcgcttaa-caagccagccttcgcttaagcg 8834287  T
Q  145 aagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataatccttgt 243  Q
    |||  |  |||||||||||||||| |||  |||||||  |||| | || | | |||||||||| ||||||||| | ||||||||||| ||||| | ||||    
T  8834286 aagaaggtcttagtcagccactttttgatttttgcttcatgcact-agagaatccttttgagcgttctaaaatgtttctttcaacttgtataacctttgt 8834188  T
Q  244 ata 246  Q
    |||    
T  8834187 ata 8834185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 14486041 - 14485988
Alignment:
Q  197 ccttttgagcattctaaaatatctctttcaacttatataatccttgtataggta 250  Q
    |||||||||||||||||||| | ||||||| ||| ||||| |||||||||||||    
T  14486041 ccttttgagcattctaaaatgtttctttcagcttgtataacccttgtataggta 14485988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 413 - 467
Target Start/End: Complemental strand, 14821599 - 14821545
Alignment:
Q  413 gggttgtaagtcatatgaaacatatgtatggttgagttgtatgtagatatacaca 467  Q
    |||||||||||||||| | | ||||  || |||||||||||||||||||||||||    
T  14821599 gggttgtaagtcatattatatatattcattgttgagttgtatgtagatatacaca 14821545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 341
Target Start/End: Original strand, 8046692 - 8046745
Alignment:
Q  288 ttgatgttagtaaattttggagatgactgagtatgaaatcaagtgattatatat 341  Q
    ||| ||||||||||| |||||||||| || |||||||| ||||||| |||||||    
T  8046692 ttggtgttagtaaatgttggagatgattgtgtatgaaaacaagtgaatatatat 8046745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 467
Target Start/End: Original strand, 14556017 - 14556070
Alignment:
Q  415 gttgtaagtcatatgaaa-catatgtatggttgagttgtatgtagatatacaca 467  Q
    |||||||||||||||||| |||||| ||  || |||||||||||||||||||||    
T  14556017 gttgtaagtcatatgaaaacatatgcattattaagttgtatgtagatatacaca 14556070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 467
Target Start/End: Original strand, 26077669 - 26077702
Alignment:
Q  434 atatgtatggttgagttgtatgtagatatacaca 467  Q
    ||||||| ||||||||||||||||||||||||||    
T  26077669 atatgtagggttgagttgtatgtagatatacaca 26077702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 96; Significance: 7e-47; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 16 - 189
Target Start/End: Complemental strand, 10829 - 10667
Alignment:
Q  16 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtc 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |           |||||||| ||||||| ||||||||||||||||||    
T  10829 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccct-----------aagcgagcagaacccagacttactgtaagccggtc 10741  T
Q  116 gctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcatt 189  Q
    ||| |||||| |||||||||||||||||||||| || |||||||||||||||| |||||||||| | |||||||    
T  10740 gcttaagcgagctagccgtcgcttaagcgaagttgatcttagtcagccactttttgaactttgcctcgtgcatt 10667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 3e-46; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 19 - 212
Target Start/End: Complemental strand, 23866078 - 23865885
Alignment:
Q  19 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgct 118  Q
    |||| |||||||||||||||||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| || |||||||||  |||||||    
T  23866078 gtgatcgaaaaaccattttgattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagacctactgtaagttggtcgct 23865979  T
Q  119 caagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggaccttttgagcattcta 212  Q
     |||||| |||||||||||||||||||||||   |||||||||||  |||||||||| || ||| ||||| ||||||||| | ||||||||||||    
T  23865978 taagcgagctagccgtcgcttaagcgaagtgagtcttagtcagcctttttctgaactattacttagtgca-tgaggggacttcttgagcattcta 23865885  T

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Target: chr8; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 17054060 - 17053949
Alignment:
Q  16 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaaccca-aacttactgtaagccggt 114  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| ||| |||||||||| |||    
T  17054060 cctgtgagcgaaaaaccattttcattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagaacctactgtaagctggt 17053961  T
Q  115 cgctcaagcgaa 126  Q
    |||| |||||||    
T  17053960 cgcttaagcgaa 17053949  T

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Target: chr8; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 179
Target Start/End: Original strand, 14057148 - 14057302
Alignment:
Q  13 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccg 112  Q
    ||||| ||||| |||||||||||||||||||| || ||||||||||||||||||||| |||           |||| ||||||| |||| |||| |||||    
T  14057148 gaacccgtgagtgaaaaaccattttgattctgccataagttcgctcaagcgaaccgtcagc-----------gagcggaacccagactttctgtgagccg 14057236  T
Q  113 gtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgc 179  Q
    |||||| |||||| |||||||||||||||||||||  ||||||| ||||||||||| ||||||||||    
T  14057237 gtcgcttaagcgagctagccgtcgcttaagcgaagatgaccttaatcagccacttt-tgaactttgc 14057302  T

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Target: chr8; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 179
Target Start/End: Complemental strand, 25111508 - 25111354
Alignment:
Q  13 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccg 112  Q
    ||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| |||           |||| ||||||| |||| |||| || ||    
T  25111508 gaacccgtaagcgaaaaaccattttgattctgccagaagttcgctcaagcgaaccgtcagc-----------gagcggaacccagactttctgtgagtcg 25111420  T
Q  113 gtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgc 179  Q
    |||||| ||||||||| ||||||||||||||||||  |||| |||||||||||||| ||||||||||    
T  25111419 gtcgcttaagcgaactggccgtcgcttaagcgaagatgaccatagtcagccacttt-tgaactttgc 25111354  T

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Target: chr8; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 24321216 - 24321327
Alignment:
Q  35 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 134  Q
    |||||||||| ||  | |||||| |||||| |||||||| | |||||||||| ||||||||| || |||||||||| ||||||| |||||||||||||||    
T  24321216 tttgattctgccaagaattcgcttaagcgagccgtgagcgacccgtaagcgaactgaacccagacctactgtaagctggtcgcttaagcgaactagccgt 24321315  T
Q  135 cgcttaagcgaa 146  Q
    ||||||||||||    
T  24321316 cgcttaagcgaa 24321327  T

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Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 75 - 236
Target Start/End: Complemental strand, 18613691 - 18613531
Alignment:
Q  75 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 174  Q
    |||||| ||||||| |||||| ||||  |||||||| ||||||| |||||||| |||||||||||||||||||  |||||||||| |||||||| |||||    
T  18613691 aaccgttagcgagcggaaccccaactctctgtaagcaggtcgcttaagcgaaccagccgtcgcttaagcgaagatgaccttagtcggccacttt-tgaac 18613593  T
Q  175 tttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataa 236  Q
    ||||| | ||||| | |||||| ||| |||||||||  ||||| |  |||||||||| |||||    
T  18613592 tttgcctcgtgcact-aggggatcctcttgagcatttaaaaatgttcctttcaacttgtataa 18613531  T

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Target: chr8; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 355 - 471
Target Start/End: Original strand, 19902808 - 19902924
Alignment:
Q  355 attgatgtatgtgcataattataattaattgggcatgttctggattgttggaagtgtggggttgtaagtcatatgaaacatatgta-tggttgagttgta 453  Q
    |||||||||||||||| ||||||| |||||| | |||||||||||||| | |  ||||| ||  |||||||||||||| ||||||| | |||||||||||    
T  19902808 attgatgtatgtgcatgattataaataattgtgtatgttctggattgtcg-agttgtggagtattaagtcatatgaaatatatgtagtagttgagttgta 19902906  T
Q  454 tgtagatatacacaggtt 471  Q
    ||||||||||||||||||    
T  19902907 tgtagatatacacaggtt 19902924  T

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Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 355 - 471
Target Start/End: Complemental strand, 23865732 - 23865615
Alignment:
Q  355 attgatgtatgtgcataattataattaattgggcatgttctggattgttggaagtgtggggttgtaagtc-atatgaaacatatgta-tggttgagttgt 452  Q
    |||||||||||||||||||||||| |||||| | |||||||| |||||| ||  |  || || ||||||| |||||||| ||||| | | ||||||||||    
T  23865732 attgatgtatgtgcataattataaataattgtgtatgttctgaattgtt-gagttacggagtagtaagtcaatatgaaatatatgcattagttgagttgt 23865634  T
Q  453 atgtagatatacacaggtt 471  Q
    |||||||||||||||||||    
T  23865633 atgtagatatacacaggtt 23865615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 346 - 406
Target Start/End: Original strand, 19987990 - 19988050
Alignment:
Q  346 ttgaatgaaattgatgtatgtgcataattataattaattgggcatgttctggattgttgga 406  Q
    |||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| ||||    
T  19987990 ttgaatgaaattgatgtatgagcataattgtaattaattgtgtatgttctggattggtgga 19988050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 393 - 470
Target Start/End: Complemental strand, 17053858 - 17053780
Alignment:
Q  393 tctggattgttggaagtgtggggttgtaagtcatatgaaacatatgta-tggttgagttgtatgtagatatacacaggt 470  Q
    ||||||||||| ||  ||||| || ||| ||||||||| ||||||||| |||| |||||||||||||||||||||||||    
T  17053858 tctggattgtttgagttgtggagtagtatgtcatatgatacatatgtagtggtcgagttgtatgtagatatacacaggt 17053780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 415 - 467
Target Start/End: Complemental strand, 21282298 - 21282245
Alignment:
Q  415 gttgtaagtcatatgaa-acatatgtatggttgagttgtatgtagatatacaca 467  Q
    ||||||||||||||| | | ||||||||||||||||||||||||||||||||||    
T  21282298 gttgtaagtcatatgtacatatatgtatggttgagttgtatgtagatatacaca 21282245  T

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Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 467
Target Start/End: Original strand, 20005554 - 20005612
Alignment:
Q  409 tgtggggttgtaagtcatatgaaacatatgtatggttgagttgtatgtagatatacaca 467  Q
    |||||||||||||||||||| | | ||||| || ||| |||||||||||||||||||||    
T  20005554 tgtggggttgtaagtcatattatatatatgcattgttaagttgtatgtagatatacaca 20005612  T

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Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 413 - 467
Target Start/End: Complemental strand, 22743947 - 22743893
Alignment:
Q  413 gggttgtaagtcatatgaaacatatgtatggttgagttgtatgtagatatacaca 467  Q
    ||||||||||||||||   | ||||| || |||||||||||||||||||||||||    
T  22743947 gggttgtaagtcatattctatatatgcattgttgagttgtatgtagatatacaca 22743893  T

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Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 467
Target Start/End: Complemental strand, 21669076 - 21669043
Alignment:
Q  434 atatgtatggttgagttgtatgtagatatacaca 467  Q
    |||||||||||||||||||||||| |||||||||    
T  21669076 atatgtatggttgagttgtatgtatatatacaca 21669043  T

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Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 466
Target Start/End: Original strand, 19988126 - 19988178
Alignment:
Q  415 gttgtaagtcatatgaaa-catatgtatggttgagttgtatgtagatatacac 466  Q
    |||||||| ||||||||| |||||| || ||| ||||||||||||||||||||    
T  19988126 gttgtaagccatatgaaaacatatgcattgttaagttgtatgtagatatacac 19988178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 471
Target Start/End: Complemental strand, 23825333 - 23825305
Alignment:
Q  443 gttgagttgtatgtagatatacacaggtt 471  Q
    |||||||||||||||||||||||||||||    
T  23825333 gttgagttgtatgtagatatacacaggtt 23825305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 471
Target Start/End: Original strand, 30766917 - 30766945
Alignment:
Q  443 gttgagttgtatgtagatatacacaggtt 471  Q
    |||||||||||||||||||||||||||||    
T  30766917 gttgagttgtatgtagatatacacaggtt 30766945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 89; Significance: 1e-42; HSPs: 2)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 13 - 236
Target Start/End: Complemental strand, 888 - 665
Alignment:
Q  13 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccg 112  Q
    ||||| || ||||||||| |||||  ||||||||||||||||||| ||||||||||  ||| || ||| ||||||   ||||| ||||  ||||||||||    
T  888 gaacccgtaagcgaaaaatcatttccattctgtcagaagttcgcttaagcgaaccgcaagcgaaacgttagcgagggaaaccccaactctctgtaagccg 789  T
Q  113 gtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattct 211  Q
    |||||| |||||||| |||||||||||||||||||  ||||||||||||||||||| |||||||||| | ||||||| |||||| |||||||||||||      
T  788 gtcgcttaagcgaaccagccgtcgcttaagcgaagatgaccttagtcagccactttttgaactttgcctcgtgcatt-aggggatccttttgagcattaa 690  T
Q  212 aaaatatctctttcaacttatataa 236  Q
    ||||| | |||||||| || |||||    
T  689 aaaatgtttctttcaatttgtataa 665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 923 - 875
Alignment:
Q  39 attctgtcagaagttcgctcaagcgaaccgtgagc-aaaccgtaagcga 86  Q
    ||||||||||| | ||||||||||||||||||||| || ||||||||||    
T  923 attctgtcagacgctcgctcaagcgaaccgtgagcgaacccgtaagcga 875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 87; Significance: 2e-41; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 16 - 298
Target Start/End: Complemental strand, 504 - 243
Alignment:
Q  16 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtc 115  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||  | | |||| ||||||||| ||||||| |||| ||||||||| |||    
T  504 cctgtgagcgaaaaaccattttgattctgtcagaagttcgcttaagcgaaccgcaaacgaaccctaagcgagcagaacccagactttctgtaagccagtc 405  T
Q  116 gctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgaggggaccttttgagcattctaaaa 215  Q
    ||                    |||||||||||| ||||||||||||| ||||||||| ||||||| |||||   ||||||| | |||||||||||||||    
T  404 gc--------------------ttaagcgaagtgaaccttagtcagcctctttctgaattttgcttcgtgcaca-aggggacatcttgagcattctaaaa 326  T
Q  216 tatctctttcaacttatataatccttgtataggtagcagaaccctacta-aacgctctgatgatcgaatttggttgatgttagt 298  Q
    ||| ||||||||||| ||||| | ||||||||||| ||||| ||||||| ||| | ||| |||||||| |||||||||||||||    
T  325 tatttctttcaacttgtataaactttgtataggtatcagaatcctactagaacacgctggtgatcgaa-ttggttgatgttagt 243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 16 - 298
Target Start/End: Complemental strand, 7649 - 7388
Alignment:
Q  16 cctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtc 115  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||  | | |||| ||||||||| ||||||| |||| ||||||||| |||    
T  7649 cctgtgagcgaaaaaccattttgattctgtcagaagttcgcttaagcgaaccgcaaacgaaccctaagcgagcagaacccagactttctgtaagccagtc 7550  T
Q  116 gctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgaggggaccttttgagcattctaaaa 215  Q
    ||                    |||||||||||| ||||||||||||| ||||||||| ||||||| |||||   ||||||| | |||||||||||||||    
T  7549 gc--------------------ttaagcgaagtgaaccttagtcagcctctttctgaattttgcttcgtgcaca-aggggacatcttgagcattctaaaa 7471  T
Q  216 tatctctttcaacttatataatccttgtataggtagcagaaccctacta-aacgctctgatgatcgaatttggttgatgttagt 298  Q
    ||| ||||||||||| ||||| | ||||||||||| ||||| ||||||| ||| | ||| |||||||| |||||||||||||||    
T  7470 tatttctttcaacttgtataaactttgtataggtatcagaatcctactagaacacgctggtgatcgaa-ttggttgatgttagt 7388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 13 - 230
Target Start/End: Complemental strand, 16303 - 16086
Alignment:
Q  13 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccg 112  Q
    ||||| || ||||||||| || ||| ||| ||||||||||||||| || |||||||  ||| |||||| ||||||| |||||| ||||| ||||||||||    
T  16303 gaacccgtaagcgaaaaatcaatttcattatgtcagaagttcgcttaaccgaaccgcaagcgaaccgttagcgagcggaaccccaactttctgtaagccg 16204  T
Q  113 gtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattct 211  Q
    |||||| |||||| ||| |||||||||||||||||  ||||||||||||||||||| |||||||||| | ||||| | |||||| ||||||||||||| |    
T  16203 gtcgcttaagcgagctaaccgtcgcttaagcgaagatgaccttagtcagccactttttgaactttgcctcgtgcact-aggggatccttttgagcatttt 16105  T
Q  212 aaaatatctctttcaactt 230  Q
     |||| |  ||||||||||    
T  16104 taaatgttcctttcaactt 16086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 86; Significance: 6e-41; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 19 - 211
Target Start/End: Original strand, 9167 - 9358
Alignment:
Q  19 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgct 118  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| | || ||||||| ||||||||| || |||||||||  |||||||    
T  9167 gtgagcgaaaaaccattttgattctgtccaaagttcgctcaagcgaaccgtgagcgacccataagcgaactgaacccagacctactgtaagttggtcgct 9266  T
Q  119 caagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac-tttgctttgtgcattgaggggaccttttgagcattct 211  Q
     |||||| |||||||||||||||||||||||   |||||||||||  ||||| ||| ||| ||| ||||| ||||||||| | |||||||||||    
T  9267 taagcgagctagccgtcgcttaagcgaagtgagtcttagtcagcc-ttttctaaacttttacttagtgca-tgaggggacttcttgagcattct 9358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 355 - 471
Target Start/End: Original strand, 9512 - 9628
Alignment:
Q  355 attgatgtatgtgcataattataattaattgggcatgttctggattgttggaagtgtggggttgtaagtcatatgaaacatatgta-tggttgagttgta 453  Q
    |||||||||||||||| ||||||| ||||||   |||||||||||||| | |  ||||| ||  |||||||||||||| ||||||| | |||||||||||    
T  9512 attgatgtatgtgcatgattataaataattgtatatgttctggattgtcg-agttgtggagtattaagtcatatgaaatatatgtagtagttgagttgta 9610  T
Q  454 tgtagatatacacaggtt 471  Q
    ||||||||||||||||||    
T  9611 tgtagatatacacaggtt 9628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 75 - 250
Target Start/End: Complemental strand, 30370 - 30195
Alignment:
Q  75 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 174  Q
    |||||| |||||||  |||| |||||| |||||||||||||||| |||||| | | || ||||||||||||||||  ||||||||||||||||||||||     
T  30370 aaccgtgagcgagcgaaacctaaactttctgtaagccggtcgcttaagcgagccaaccttcgcttaagcgaagtgagccttagtcagccactttctgaat 30271  T
Q  175 tttgctttgtgcattgaggggacc-ttttgagcattctaaaatatctctttcaacttatataatccttgtataggta 250  Q
    ||||||| ||||| | |||||||| |||||||||||||||||| | ||||||||||| ||||| |||||||||||||    
T  30270 tttgcttcgtgcact-aggggacccttttgagcattctaaaatgtttctttcaacttgtataacccttgtataggta 30195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 78; Significance: 4e-36; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 293 - 406
Target Start/End: Original strand, 7557 - 7670
Alignment:
Q  293 gttagtaaattttggagatgactgagtatgaaatcaagtgattatatattacattgaatgaaattgatgtatgtgcataattataattaattgggcatgt 392  Q
    |||||| |||||||||||||| ||||||||||||||||||| |||||| ||  |||||||||||||||||||| ||||||||||||||||||||| ||||    
T  7557 gttagtgaattttggagatgattgagtatgaaatcaagtgaatatatagtatgttgaatgaaattgatgtatgagcataattataattaattgggtatgt 7656  T
Q  393 tctggattgttgga 406  Q
    ||||| ||||||||    
T  7657 tctgggttgttgga 7670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 399 - 467
Target Start/End: Original strand, 7730 - 7798
Alignment:
Q  399 ttgttggaagtgtggggttgtaagtcatatgaaacatatgtatggttgagttgtatgtagatatacaca 467  Q
    ||||||||| || || |||| ||||||||||||||||||| || ||| |||||||||||||||||||||    
T  7730 ttgttggaattgcggagttgcaagtcatatgaaacatatgcattgttaagttgtatgtagatatacaca 7798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 76; Significance: 6e-35; HSPs: 2)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 13 - 209
Target Start/End: Original strand, 581 - 766
Alignment:
Q  13 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccg 112  Q
    ||||| || ||||||||| || ||| ||||||||||||||||||||||||||||||| |||           ||||  ||||| ||||| ||||||||||    
T  581 gaacccgtaagcgaaaaatcaatttcattctgtcagaagttcgctcaagcgaaccgtcagc-----------gagcgaaaccccaactttctgtaagccg 669  T
Q  113 gtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcatt 209  Q
    |||||| ||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||| | ||||| | |||||| |||||||||||||    
T  670 gtcgcttaagcgaactagccgtcgcttaagcgaagatgaccttagtcagccactttttgaactttgcgtcgtgcact-aggggatccttttgagcatt 766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 7605 - 7702
Alignment:
Q  112 ggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcatt 209  Q
    ||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||| | ||||| | |||||| |||||||||||||    
T  7605 ggtcgcttaagcgaactagccgtcgcttaagcgaagatgaccttagtcagccactttttgaactttgcgtcgtgcact-aggggatccttttgagcatt 7702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 52 - 209
Target Start/End: Original strand, 3854 - 4011
Alignment:
Q  52 ttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtgga 151  Q
    |||||| ||||||||||  ||| ||||||||  |||| ||||||| ||| ||||||||||||||||| ||||||||||| ||||||||||||||||| ||    
T  3854 ttcgcttaagcgaaccgcaagcgaaccgtaattgagcagaacccagactcactgtaagccggtcgcttaagcgaactagacgtcgcttaagcgaagttga 3953  T
Q  152 ccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcatt 209  Q
    ||||||||||||||||| ||||| |||| | ||||||| ||| || |||||||||||||    
T  3954 ccttagtcagccactttttgaacgttgcctcgtgcatt-aggagacccttttgagcatt 4011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 41 - 246
Target Start/End: Original strand, 18961 - 19166
Alignment:
Q  41 tctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgctta 140  Q
    ||||||||||||||||| ||||||||||||||| | || | ||||||| |||||| ||||  |||| |||| |||||| || ||| | ||||||| | ||    
T  18961 tctgtcagaagttcgcttaagcgaaccgtgagcgagccattagcgagcggaaccccaactgtctgtgagccagtcgcttaaccgagccagccgtctccta 19060  T
Q  141 agcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataatcc 239  Q
    ||||||| ||  |||||||||||||||| |||| ||||||| ||||| | |||||| ||||||||||||| |||||| | ||||||||||||||||| |     
T  19061 agcgaagagggtcttagtcagccactttttgaattttgcttcgtgcact-aggggatccttttgagcattttaaaatgtttctttcaacttatataacct 19159  T
Q  240 ttgtata 246  Q
    |||||||    
T  19160 ttgtata 19166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 41 - 246
Target Start/End: Complemental strand, 1322 - 1117
Alignment:
Q  41 tctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgctta 140  Q
    ||||||||||||||||| |||||||||||||   | || | ||||||| ||| || ||||  |||| ||||||||||| |||||| | ||||||||||||    
T  1322 tctgtcagaagttcgcttaagcgaaccgtgattgagccattagcgagcggaaacccaactctctgtgagccggtcgcttaagcgagccagccgtcgctta 1223  T
Q  141 agcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataatcc 239  Q
    ||||||| ||  |||||||||||||||| |||| ||||||| ||||| | |||||| ||||||||||||| |||||| | ||||||||||| ||||| |     
T  1222 agcgaagagggtcttagtcagccactttttgaattttgcttcgtgcact-aggggatccttttgagcattttaaaatgtttctttcaacttgtataacct 1124  T
Q  240 ttgtata 246  Q
    |||||||    
T  1123 ttgtata 1117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 74; Significance: 9e-34; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 40 - 359
Target Start/End: Original strand, 81764 - 82082
Alignment:
Q  40 ttctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgctt 139  Q
    ||||| |||||||||||| ||||||||||| ||| ||| || |||||||  ||||  ||||  ||||||| |||||||| |||||| | |||||||||||    
T  81764 ttctgccagaagttcgcttaagcgaaccgtaagcgaactgttagcgagcgaaacctcaactctctgtaagtcggtcgcttaagcgagccagccgtcgctt 81863  T
Q  140 aagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataatc 238  Q
    ||||||||| |  |||||||||||||||| |||| ||||||| || ||   |||| | ||||||||||||| |||||| | ||||||||||| ||||| |    
T  81864 aagcgaagtaggtcttagtcagccactttttgaattttgcttcgtaca-ccagggaatccttttgagcattttaaaatgtttctttcaacttgtataacc 81962  T
Q  239 cttgtataggtagcagaaccctac-taaacgctctgatgatcgaatttggttgatgttagtaaattttggagatgactgagtatgaaatcaagtgattat 337  Q
    |||||||| | | | ||| ||||| ||||| |  || |  ||||| ||||||||  ||||| ||||||||| |||  ||||||||||| ||||||| |||    
T  81963 cttgtatatgca-ctgaatcctacttaaacacattggtagtcgaa-ttggttgaatttagtgaattttggatatgtttgagtatgaaaccaagtgaatat 82060  T
Q  338 atattacattgaatgaaattga 359  Q
    ||||||  ||||||||| ||||    
T  82061 atattatgttgaatgaacttga 82082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 35 - 205
Target Start/End: Original strand, 80036 - 80206
Alignment:
Q  35 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 134  Q
    |||||||||| ||  | |||||| |||||| |||||||| | |||||||||| ||||||||| || |||||||||  ||||||| |||||| ||||||||    
T  80036 tttgattctgccaagaattcgcttaagcgagccgtgagcgacccgtaagcgaactgaacccagacctactgtaagatggtcgcttaagcgagctagccgt 80135  T
Q  135 cgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgaggggaccttttgag 205  Q
    |||||||||||| ||    ||||||||||  ||||||||| |||||| ||||| | ||||  |||||||||    
T  80136 cgcttaagcgaactgagtgttagtcagcctttttctgaaccttgcttcgtgcactaagggatccttttgag 80206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 69; Significance: 9e-31; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 19 - 471
Target Start/End: Complemental strand, 111378 - 110939
Alignment:
Q  19 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgct 118  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| || |||||||||  ||||||     
T  111378 gtgagcgaaaaaccattttgattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccatacctactgtaagttggtcgc- 111280  T
Q  119 caagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaact-ttgctttgtgcattgaggggaccttttgagcattctaaaata 217  Q
                       ||||||||||||   |||||||||||  |||||||||| || ||| |||||| |||||||| | |||||||||||| |||     
T  111279 -------------------ttaagcgaagtgagtcttagtcagcct-tttctgaactattacttagtgcat-gaggggacttcttgagcattctataatt 111201  T
Q  218 tctctttcaacttatataatccttgtataggtagcagaaccctacta-aacgctctgatgatcgaatttggttgatgttagtaaattttggagatgactg 316  Q
    |||| || ||||  ||||| ||| || |||||| | ||| |||| || |||   | | |||| | ||| | ||| ||||||||||| |||||||||| ||    
T  111200 tctcctttaactagtataaccctggtgtaggtaactgaatcctattagaacaagccggtgattggatt-gattggtgttagtaaatgttggagatgattg 111102  T
Q  317 agtatgaaatcaagtgattat------atattacatt--gaatgaaattgatgtatgtgcataattataattaattgggcatgttctggattgttggaag 408  Q
     |||||||| ||||||| |||      |||| ||||   |||||  |||||||||||||| ||||||||| |||||| | | |||||||||||| | |      
T  111101 tgtatgaaaacaagtgaatatgtatatatataacatgtggaatgtgattgatgtatgtgcgtaattataaataattgtgtaggttctggattgtcg-agt 111003  T
Q  409 tgtggggttgtaagtcatatgaaacatatgta-tggttgagttgtatgtagatatacacaggtt 471  Q
    ||||| || ||||||||||||||| ||||||| | |||||||||||||||||||||||||||||    
T  111002 tgtggagtagtaagtcatatgaaatatatgtaatagttgagttgtatgtagatatacacaggtt 110939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 91747 - 91858
Alignment:
Q  35 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 134  Q
    ||||||||||||  |||||||| |||||||||||||||| | |||||||||| ||||||||| || |||||||||  ||||||| |||||| ||||||||    
T  91747 tttgattctgtccaaagttcgcccaagcgaaccgtgagcgacccgtaagcgaactgaacccagacctactgtaagttggtcgcttaagcgagctagccgt 91846  T
Q  135 cgcttaagcgaa 146  Q
    ||||||||||||    
T  91847 cgcttaagcgaa 91858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 97473 - 97584
Alignment:
Q  35 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 134  Q
    ||||||||||||  |||||||| |||||||||||||||| | |||||||||| ||||||||| || |||||||||  ||||||| |||||| ||||||||    
T  97473 tttgattctgtccaaagttcgcccaagcgaaccgtgagcgacccgtaagcgaactgaacccagacctactgtaagttggtcgcttaagcgagctagccgt 97572  T
Q  135 cgcttaagcgaa 146  Q
    ||||||||||||    
T  97573 cgcttaagcgaa 97584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 13 - 178
Target Start/End: Original strand, 34861 - 35015
Alignment:
Q  13 gaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccg 112  Q
    ||||| || ||||||||| || ||| ||||||||||||||||||||||||||||||| |||           |||| |||||  ||||| ||||||||||    
T  34861 gaacccgtaagcgaaaaatcaatttcattctgtcagaagttcgctcaagcgaaccgtcagc-----------gagcggaacctcaactttctgtaagccg 34949  T
Q  113 gtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttg 178  Q
    |||||| ||||||||||||| ||||||||||||||  ||||||||||||||||||| |||||||||    
T  34950 gtcgcttaagcgaactagccatcgcttaagcgaagatgaccttagtcagccactttttgaactttg 35015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 78 - 179
Target Start/End: Complemental strand, 6976 - 6876
Alignment:
Q  78 cgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaacttt 177  Q
    ||||||||||| ||||||| ||||||||||||||||||||| |||||| |||||||||||||||||||||  ||||| ||||||||||||| ||||||||    
T  6976 cgtaagcgagcagaacccagacttactgtaagccggtcgcttaagcgagctagccgtcgcttaagcgaagatgacctcagtcagccacttt-tgaacttt 6878  T
Q  178 gc 179  Q
    ||    
T  6877 gc 6876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 64; Significance: 9e-28; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 1343 - 1442
Alignment:
Q  19 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgct 118  Q
    ||||||||||||| ||||||||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||| || |||||||||| |||||||    
T  1343 gtgagcgaaaaacaattttgattctgtccaaagttcgctcaagcgaaccgtgagcgacccgtaagcgaactgaacccagacctactgtaagctggtcgct 1442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 63; Significance: 3e-27; HSPs: 3)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 75 - 209
Target Start/End: Original strand, 4195 - 4329
Alignment:
Q  75 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 174  Q
    |||||||| ||||| ||||||| ||||||||||||| | ||||| ||||||||||| ||||||||||||||||| |||||||||||| |||||  |||||    
T  4195 aaccgtaatcgagcagaacccagacttactgtaagctgatcgcttaagcgaactagacgtcgcttaagcgaagttgaccttagtcagtcacttcttgaac 4294  T
Q  175 tttgctttgtgcattgaggggaccttttgagcatt 209  Q
     |||| | |||||||  | | ||||||||||||||    
T  4295 gttgcctcgtgcattaggagaaccttttgagcatt 4329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 351 - 404
Target Start/End: Original strand, 17972 - 18025
Alignment:
Q  351 tgaaattgatgtatgtgcataattataattaattgggcatgttctggattgttg 404  Q
    ||||||||||||||| ||||||||||||||||||| | ||||||||||||||||    
T  17972 tgaaattgatgtatgagcataattataattaattgtgtatgttctggattgttg 18025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 351 - 404
Target Start/End: Original strand, 23605 - 23658
Alignment:
Q  351 tgaaattgatgtatgtgcataattataattaattgggcatgttctggattgttg 404  Q
    ||||||||||||||| ||||||||||||||||||| | ||||||||||||||||    
T  23605 tgaaattgatgtatgagcataattataattaattgtgtatgttctggattgttg 23658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 63; Significance: 3e-27; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 75 - 236
Target Start/End: Complemental strand, 65575 - 65414
Alignment:
Q  75 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 174  Q
    |||||| ||||||| |||||| ||||  |||||||||||||||| |||||||| ||||||| |||||||| ||  ||||||||||||||||||| ||||     
T  65575 aaccgttagcgagcggaaccccaactctctgtaagccggtcgcttaagcgaaccagccgtcacttaagcggagaagaccttagtcagccactttttgaat 65476  T
Q  175 tttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataa 236  Q
    ||||| | ||||| | |||||| |||||||| |||| |||||| | ||||||||||| |||||    
T  65475 tttgcctcgtgcact-aggggatccttttgaacattttaaaatgtttctttcaacttgtataa 65414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 41 - 168
Target Start/End: Complemental strand, 1572 - 1445
Alignment:
Q  41 tctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgctta 140  Q
    |||||||||||||| || ||||||||||||||| | ||   ||||||| |||||| ||||  |||| ||||||||||| |||||| | |||| |||||||    
T  1572 tctgtcagaagttcacttaagcgaaccgtgagcgagccagtagcgagcggaaccccaactctctgtcagccggtcgcttaagcgagccagccttcgctta 1473  T
Q  141 agcgaagtggaccttagtcagccacttt 168  Q
    ||||||   |  ||||||||||||||||    
T  1472 agcgaacaaggtcttagtcagccacttt 1445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 441 - 471
Target Start/End: Original strand, 52350 - 52380
Alignment:
Q  441 tggttgagttgtatgtagatatacacaggtt 471  Q
    |||||||||||||||||||||||||||||||    
T  52350 tggttgagttgtatgtagatatacacaggtt 52380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 471
Target Start/End: Original strand, 46947 - 46975
Alignment:
Q  443 gttgagttgtatgtagatatacacaggtt 471  Q
    |||||||||||||||||||||||||||||    
T  46947 gttgagttgtatgtagatatacacaggtt 46975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 51 - 215
Target Start/End: Complemental strand, 17661 - 17497
Alignment:
Q  51 gttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtgg 150  Q
    ||||||||||| || |||  ||| ||| || |||||||  ||||||||||| |||||||||||||||| |||||| | |||| ||||||||||||||||     
T  17661 gttcgctcaagagacccgcaagcgaactgtgagcgagcgaaacccaaactttctgtaagccggtcgcttaagcgagccagccttcgcttaagcgaagtga 17562  T
Q  151 accttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaa 215  Q
     |||| ||||||||||||||||| |||| || ||||| | ||| || |||||||||||||||||||    
T  17561 gccttggtcagccactttctgaattttgtttcgtgcact-aggcgagccttttgagcattctaaaa 17497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 26 - 179
Target Start/End: Original strand, 23192 - 23334
Alignment:
Q  26 aaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcga 125  Q
    |||||||||||| |||||| |||||||||||||||||||||||| |||           ||| ||||||| ||||| |||| ||||||| ||  ||||||    
T  23192 aaaaaccattttcattctgccagaagttcgctcaagcgaaccgtcagc-----------gagttgaaccccaactttctgtgagccggttgcctaagcga 23280  T
Q  126 actagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgc 179  Q
     |||||||||||||||||||||  ||||||||||||||||||| ||||||||||    
T  23281 gctagccgtcgcttaagcgaagatgaccttagtcagccactttttgaactttgc 23334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 26 - 209
Target Start/End: Original strand, 15475 - 15647
Alignment:
Q  26 aaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcga 125  Q
    |||||||||||| |||||| |||||||||||||||||||||||| |||           |||| |||||| ||||| |||| |||| |||||| ||| ||    
T  15475 aaaaaccattttcattctgccagaagttcgctcaagcgaaccgtcagc-----------gagcggaaccccaactttctgtgagccagtcgcttaagtga 15563  T
Q  126 actagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcatt 209  Q
     |||||| ||||||||||||||  ||||||||||||||||||| |||| ||||| | ||||| | |||||| |||||||||||||    
T  15564 gctagccatcgcttaagcgaagatgaccttagtcagccactttttgaaatttgcctcgtgcact-aggggatccttttgagcatt 15647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 13 - 228
Target Start/End: Complemental strand, 116388 - 116183
Alignment:
Q  13 gaacctgtgagcgaaaaaccattttg-attctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagcc 111  Q
    ||||| || ||||||||| ||||||  ||||||||||||||||||||||||||||||| |||           ||||  || || ||||  |||||||||    
T  116388 gaacccgtaagcgaaaaatcatttttcattctgtcagaagttcgctcaagcgaaccgttagc-----------gagcgaaatcccaactctctgtaagcc 116300  T
Q  112 ggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattc 210  Q
    ||||||| |||||||| |||||||||||||||||||  ||||||||||||||| ||| |||||||||| | ||||| | |||||| ||||||||| |||     
T  116299 ggtcgcttaagcgaaccagccgtcgcttaagcgaagatgaccttagtcagccattttttgaactttgcctcgtgcact-aggggatccttttgagtattt 116201  T
Q  211 taaaatatctctttcaac 228  Q
    |||||| | |||||||||    
T  116200 taaaatgtttctttcaac 116183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 75 - 209
Target Start/End: Original strand, 129221 - 129355
Alignment:
Q  75 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 174  Q
    |||||| ||||||| |||||| ||||| |||| ||||||||||| |||||| | |||||||||||||||||||  |  |||||||||||||||| ||||     
T  129221 aaccgttagcgagcggaaccccaactttctgtgagccggtcgcttaagcgagccagccgtcgcttaagcgaagaaggtcttagtcagccactttttgaat 129320  T
Q  175 tttgctttgtgcattgagggga-ccttttgagcatt 209  Q
    ||||||| ||||| | |||||| |||||||||||||    
T  129321 tttgcttcgtgcact-aggggatccttttgagcatt 129355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 41 - 236
Target Start/End: Complemental strand, 51749 - 51554
Alignment:
Q  41 tctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgctta 140  Q
    |||| |||||||||||| |||||||||||  || |||||| |||||||  ||||  ||||  || | ||| |||| || |||||| | ||||||||||||    
T  51749 tctgccagaagttcgcttaagcgaaccgtatgcgaaccgttagcgagcgaaacctcaactctctatgagctggtcacttaagcgagccagccgtcgctta 51650  T
Q  141 agcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataa 236  Q
    |||||||  |  |||||||||||||||| |||| ||||||||||||| | |||| | ||||||||||||| |||||| | ||||||||||| |||||    
T  51649 agcgaagaaggtcttagtcagccactttttgaattttgctttgtgcact-agggaatccttttgagcattttaaaatgtttctttcaacttgtataa 51554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 35 - 163
Target Start/End: Original strand, 4217 - 4345
Alignment:
Q  35 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgt 134  Q
    |||||||||| ||  | |||||| |||||| |||||||| | |||||||||| ||||||||| || |||||||||| ||||||| ||||||||||||| |    
T  4217 tttgattctgccaagaattcgcttaagcgagccgtgagcgacccgtaagcgaactgaacccagacctactgtaagctggtcgcttaagcgaactagccat 4316  T
Q  135 cgcttaagcgaagtggaccttagtcagcc 163  Q
    |||||||||||| ||  | ||||||||||    
T  4317 cgcttaagcgaactgagcgttagtcagcc 4345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 41 - 246
Target Start/End: Complemental strand, 121406 - 121200
Alignment:
Q  41 tctgtcagaagttcgctcaagcgaaccgtgagcaaaccg-taagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgctt 139  Q
    |||| ||||||||||||  |||||||||||||| ||||  | ||||||| |||| | ||||  |||||||||||| ||| |||||| | |||| ||||||    
T  121406 tctgccagaagttcgcttgagcgaaccgtgagcgaaccccttagcgagcagaacaccaactctctgtaagccggttgcttaagcgagccagccttcgctt 121307  T
Q  140 aagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataatc 238  Q
    ||||||||  |  |||||||||||||||| |||  ||||||| ||||| | |||| | ||||||||||||| |||||| | ||||||||||| ||||| |    
T  121306 aagcgaagaaggtcttagtcagccactttttgacttttgcttcgtgcact-agggaatccttttgagcattttaaaatgtttctttcaacttgtataacc 121208  T
Q  239 cttgtata 246  Q
     |||||||    
T  121207 tttgtata 121200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 41 - 246
Target Start/End: Complemental strand, 132283 - 132077
Alignment:
Q  41 tctgtcagaagttcgctcaagcgaaccgtgagcaaaccg-taagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgctt 139  Q
    |||| ||||||||||||  |||||||||||||| ||||  | ||||||| |||| | ||||  |||||||||||| ||| |||||| | |||| ||||||    
T  132283 tctgccagaagttcgcttgagcgaaccgtgagcgaaccccttagcgagcagaacaccaactctctgtaagccggttgcttaagcgagccagccttcgctt 132184  T
Q  140 aagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataatc 238  Q
    ||||||||  |  |||||||||||||||| |||  ||||||| ||||| | |||| | ||||||||||||| |||||| | ||||||||||| ||||| |    
T  132183 aagcgaagaaggtcttagtcagccactttttgacttttgcttcgtgcact-agggaatccttttgagcattttaaaatgtttctttcaacttgtataacc 132085  T
Q  239 cttgtata 246  Q
     |||||||    
T  132084 tttgtata 132077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 12 - 236
Target Start/End: Original strand, 15521 - 15733
Alignment:
Q  12 agaacctgtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagcc 111  Q
    |||||| || ||||||||| |||||  ||| ||||||||||||||||||||||||||| ||| |||       ||    ||||||||||  || |||| |    
T  15521 agaacccgtaagcgaaaaatcatttccattatgtcagaagttcgctcaagcgaaccgttagcgaac-------ga----aacccaaactctctataagac 15609  T
Q  112 ggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattc 210  Q
    ||||||| |||||||| | |||||||||||||||||  ||||||||||||||||||| |||||||||| | ||||| | ||| || |||||||||||||     
T  15610 ggtcgcttaagcgaaccaaccgtcgcttaagcgaagatgaccttagtcagccacttt-tgaactttgcctcgtgcact-aggagatccttttgagcattt 15707  T
Q  211 taaaatatctctttcaacttatataa 236  Q
     ||||| | ||||||||||| |||||    
T  15708 aaaaatgtttctttcaacttgtataa 15733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 75 - 228
Target Start/End: Original strand, 102503 - 102656
Alignment:
Q  75 aaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaac 174  Q
    |||||| ||||||| |||||| ||||| ||||||| |||||||| |||||||| |||| ||||||||||||||  |||||||||| |||||||| |||||    
T  102503 aaccgtcagcgagcggaaccccaactttctgtaagtcggtcgcttaagcgaaccagccatcgcttaagcgaagatgaccttagtcggccactttttgaac 102602  T
Q  175 tttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaac 228  Q
     |||| | ||||| | |||||| ||||||||| ||| |||||  | |||||||||    
T  102603 cttgcctcgtgcact-aggggatccttttgagtattttaaaaggtttctttcaac 102656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 35 - 128
Target Start/End: Complemental strand, 134960 - 134867
Alignment:
Q  35 tttgattctgtcagaagttcgctcaagcgaaccgtgagcaaaccgtaagcgagctgaacccaaacttactgtaagccggtcgctcaagcgaact 128  Q
    |||||||||||||  | |||||| ||||||||||||||| | |||||||||| ||||||||| || |||||||||| ||||||| |||||||||    
T  134960 tttgattctgtcaagaattcgcttaagcgaaccgtgagcgacccgtaagcgaactgaacccagacctactgtaagctggtcgcttaagcgaact 134867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1061 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1061
Description:

Target: scaffold1061; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 129 - 230
Target Start/End: Complemental strand, 1817 - 1716
Alignment:
Q  129 agccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaa 227  Q
    |||||||||||||||||||  ||||||||||||||||||| |||| ||||| | ||||| | |||||| ||||||||||||| |||||| | ||||||||    
T  1817 agccgtcgcttaagcgaagatgaccttagtcagccactttttgaattttgcctcgtgcact-aggggatccttttgagcattttaaaatgtttctttcaa 1719  T
Q  228 ctt 230  Q
    |||    
T  1718 ctt 1716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 82 - 179
Target Start/End: Original strand, 41171 - 41267
Alignment:
Q  82 agcgagctgaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgc 179  Q
    ||||||| |||||| ||| | |||| ||||| ||||| ||||||||||| ||||||||||||||||  |||||||||||| |||||| ||||||||||    
T  41171 agcgagcggaaccccaaccttctgtgagccgatcgcttaagcgaactagacgtcgcttaagcgaagatgaccttagtcagacacttt-tgaactttgc 41267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 45; Significance: 2e-16; HSPs: 3)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 406
Target Start/End: Original strand, 1527 - 1587
Alignment:
Q  346 ttgaatgaaattgatgtatgtgcataattataattaattgggcatgttctggattgttgga 406  Q
    |||||||||||||||||||| |||||||| |||||||||| | ||||||||||||||||||    
T  1527 ttgaatgaaattgatgtatgagcataattttaattaattgtgtatgttctggattgttgga 1587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 415 - 467
Target Start/End: Original strand, 1663 - 1716
Alignment:
Q  415 gttgtaagtcatatgaaa-catatgtatggttgagttgtatgtagatatacaca 467  Q
    |||||||||||||||||| |||||| || ||| |||||||||||||||||||||    
T  1663 gttgtaagtcatatgaaaacatatgcattgttaagttgtatgtagatatacaca 1716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 434 - 467
Target Start/End: Complemental strand, 3140 - 3107
Alignment:
Q  434 atatgtatggttgagttgtatgtagatatacaca 467  Q
    ||||||||||||||||||||||||||||||||||    
T  3140 atatgtatggttgagttgtatgtagatatacaca 3107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 471
Target Start/End: Original strand, 174440 - 174557
Alignment:
Q  355 attgatgtatgtgcataattataattaattgggcatgttctggattgttggaagtgtggggttgtaagtcatatgaaacatatgt-atggttgagttgta 453  Q
    |||||||||||||||||||||||| |||||| | ||||||||||||||| ||  || || |  ||||||||| ||||| |||||| || || || |||||    
T  174440 attgatgtatgtgcataattataaataattgtgtatgttctggattgtttgagttgcggagcagtaagtcatttgaaaaatatgtaatagtcgaattgta 174539  T
Q  454 tgtagatatacacaggtt 471  Q
    |||||| ||||| |||||    
T  174540 tgtagagatacaaaggtt 174557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 248
Target Start/End: Original strand, 493588 - 493786
Alignment:
Q  51 gttcgctcaagcgaaccgtgagcaaaccgtaagcgagct-gaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtg 149  Q
    |||||||||||||||| |||||| |||||| |||||||  |||||  ||| |  |||  || ||||||| |||||| ||| || ||||||||||||| ||    
T  493588 gttcgctcaagcgaactgtgagcgaaccgtgagcgagcgagaacctcaaccttttgtgtgctggtcgcttaagcgagctacccttcgcttaagcgaactg 493687  T
Q  150 gaccttagtcagccactttctgaactttgctttgtgcattgagggga-ccttttgagcattctaaaatatctctttcaacttatataatccttgtatagg 248  Q
      ||||||||||||  ||||||||| |||||| ||||| | |||||| ||||||||| ||| | |||| | ||||| | ||| |||||  ||||||||||    
T  493688 agccttagtcagcctttttctgaaccttgcttcgtgcact-aggggacccttttgagtatttttaaatgtttcttttagcttgtataactcttgtatagg 493786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 165
Target Start/End: Complemental strand, 525204 - 525142
Alignment:
Q  103 ctgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccac 165  Q
    ||||||| |||||||| |||||||| |||| ||||||||||||||  | |||| |||||||||    
T  525204 ctgtaagacggtcgcttaagcgaaccagccttcgcttaagcgaagaaggccttggtcagccac 525142  T

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Target: scaffold0483 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 50 - 181
Target Start/End: Original strand, 11569 - 11700
Alignment:
Q  50 agttcgctcaagcgaaccgtgagcaaaccgtaagcgagct-gaacccaaacttactgtaagccggtcgctcaagcgaactagccgtcgcttaagcgaagt 148  Q
    ||||||||| |||||||||  ||| | |||| |||||||  ||| |||||||| ||||| || ||||||| |||||||||| || ||||||||||||  |    
T  11569 agttcgctcgagcgaaccgcaagcgatccgtgagcgagcgagaatccaaacttcctgta-gctggtcgcttaagcgaactacccttcgcttaagcgagct 11667  T
Q  149 ggaccttagtcagccactttctgaactttgctt 181  Q
    |  |||||||||||| || ||||||||||||||    
T  11668 gagccttagtcagcctctatctgaactttgctt 11700  T

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Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 69
Target Start/End: Complemental strand, 49645 - 49595
Alignment:
Q  19 gtgagcgaaaaaccattttgattctgtcagaagttcgctcaagcgaaccgt 69  Q
    ||||||||||||||||||||||||||||  |||||||||||| ||||||||    
T  49645 gtgagcgaaaaaccattttgattctgtccaaagttcgctcaatcgaaccgt 49595  T

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Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 415 - 467
Target Start/End: Complemental strand, 152599 - 152546
Alignment:
Q  415 gttgtaagtcatatgaa-acatatgtatggttgagttgtatgtagatatacaca 467  Q
    ||||||||||||||| | | ||||||||||||||||||||||||||||||||||    
T  152599 gttgtaagtcatatgtacatatatgtatggttgagttgtatgtagatatacaca 152546  T

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Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 471
Target Start/End: Original strand, 174529 - 174557
Alignment:
Q  443 gttgagttgtatgtagatatacacaggtt 471  Q
    |||||||||||||||||||||||||||||    
T  174529 gttgagttgtatgtagatatacacaggtt 174557  T

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Target: scaffold0108 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 411 - 467
Target Start/End: Complemental strand, 45747 - 45691
Alignment:
Q  411 tggggttgtaagtcatatgaaacatatgtatggttgagttgtatgtagatatacaca 467  Q
    |||||||||||||||||| | | ||||| || |||||||||||||||||||||||||    
T  45747 tggggttgtaagtcatattatatatatgcattgttgagttgtatgtagatatacaca 45691  T

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Target: scaffold0535 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 415 - 465
Target Start/End: Original strand, 5969 - 6020
Alignment:
Q  415 gttgtaagtcatatgaa-acatatgtatggttgagttgtatgtagatataca 465  Q
    ||||||||||||||| | | ||||||||||||||||||||||||||||||||    
T  5969 gttgtaagtcatatgtacatatatgtatggttgagttgtatgtagatataca 6020  T

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Target: scaffold0244 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 467
Target Start/End: Complemental strand, 13847 - 13789
Alignment:
Q  409 tgtggggttgtaagtcatatgaaacatatgtatggttgagttgtatgtagatatacaca 467  Q
    |||||||||||||||||||| | | ||||| || ||||| |||||||||||||||||||    
T  13847 tgtggggttgtaagtcatattatatatatgcattgttgatttgtatgtagatatacaca 13789  T

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Target: scaffold0049 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 467
Target Start/End: Original strand, 42870 - 42924
Alignment:
Q  413 gggttgtaagtcatatgaaacatatgtatggttgagttgtatgtagatatacaca 467  Q
    |||||||||||||||| | | ||||| || |||||||||||||||||||||||||    
T  42870 gggttgtaagtcatattatatatatgcattgttgagttgtatgtagatatacaca 42924  T

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Target: scaffold1853 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1853
Description:

Target: scaffold1853; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 467
Target Start/End: Original strand, 741 - 793
Alignment:
Q  415 gttgtaagtcatatgaaacatatgtatggttgagttgtatgtagatatacaca 467  Q
    |||||||||||||| | ||||||| ||  ||||||||||||||||||||||||    
T  741 gttgtaagtcatattatacatatgcattcttgagttgtatgtagatatacaca 793  T

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Target: scaffold0261 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 187
Target Start/End: Original strand, 24192 - 24267
Alignment:
Q  112 ggtcgctcaagcgaactagccgtcgcttaagcgaagtggaccttagtcagccactttctgaactttgctttgtgca 187  Q
    ||||||| |||||| ||| || ||||||||||||  ||  |||||||||| | ||||||||||||||||| |||||    
T  24192 ggtcgcttaagcgagctatccttcgcttaagcgagatgagccttagtcagtctctttctgaactttgcttcgtgca 24267  T

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Target: scaffold0261; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 87
Target Start/End: Original strand, 24070 - 24106
Alignment:
Q  51 gttcgctcaagcgaaccgtgagcaaaccgtaagcgag 87  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  24070 gttcgcttaagcgaaccgtgagcgaaccgtaagcgag 24106  T

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Target: scaffold0180 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 413 - 467
Target Start/End: Complemental strand, 12670 - 12616
Alignment:
Q  413 gggttgtaagtcatatgaaacatatgtatggttgagttgtatgtagatatacaca 467  Q
    |||||||||||||||| | | ||||| || |||||||||||||||||||| ||||    
T  12670 gggttgtaagtcatattatatatatgcattgttgagttgtatgtagatattcaca 12616  T

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Target: scaffold0167 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 409 - 467
Target Start/End: Complemental strand, 20082 - 20024
Alignment:
Q  409 tgtggggttgtaagtcatatgaaacatatgtatggttgagttgtatgtagatatacaca 467  Q
    ||||| |||||||||||| | | | ||||| || |||||||||||||||||||||||||    
T  20082 tgtggagttgtaagtcatgttatatatatgcattgttgagttgtatgtagatatacaca 20024  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 413 - 467
Target Start/End: Original strand, 18110 - 18164
Alignment:
Q  413 gggttgtaagtcatatgaaacatatgtatggttgagttgtatgtagatatacaca 467  Q
    |||||||||||||||| | | ||||  || |||||||||||||||||||||||||    
T  18110 gggttgtaagtcatattatatatattcattgttgagttgtatgtagatatacaca 18164  T

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Target: scaffold0266 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 467
Target Start/End: Complemental strand, 23216 - 23183
Alignment:
Q  434 atatgtatggttgagttgtatgtagatatacaca 467  Q
    ||||| ||||||||||||||||||||||||||||    
T  23216 atatgcatggttgagttgtatgtagatatacaca 23183  T

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Target: scaffold0106 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 471
Target Start/End: Complemental strand, 38610 - 38582
Alignment:
Q  443 gttgagttgtatgtagatatacacaggtt 471  Q
    |||||||||||||||||||||||||||||    
T  38610 gttgagttgtatgtagatatacacaggtt 38582  T

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Target: scaffold0076 (Bit Score: 29; Significance: 0.0000007; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 471
Target Start/End: Original strand, 30113 - 30141
Alignment:
Q  443 gttgagttgtatgtagatatacacaggtt 471  Q
    |||||||||||||||||||||||||||||    
T  30113 gttgagttgtatgtagatatacacaggtt 30141  T

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Target: scaffold0076; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 443 - 471
Target Start/End: Original strand, 35514 - 35542
Alignment:
Q  443 gttgagttgtatgtagatatacacaggtt 471  Q
    |||||||||||||||||||||||||||||    
T  35514 gttgagttgtatgtagatatacacaggtt 35542  T

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