View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3476_high_1 (Length: 502)

Name: NF3476_high_1
Description: NF3476
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3476_high_1
NF3476_high_1
[»] chr2 (2 HSPs)
chr2 (22-474)||(9834511-9834966)
chr2 (196-245)||(18777160-18777209)
[»] chr1 (5 HSPs)
chr1 (23-261)||(3461110-3461348)
chr1 (188-244)||(28214411-28214467)
chr1 (197-245)||(26418922-26418970)
chr1 (197-245)||(32108310-32108358)
chr1 (217-245)||(40454742-40454770)
[»] chr5 (3 HSPs)
chr5 (210-308)||(14945192-14945290)
chr5 (204-273)||(27200605-27200674)
chr5 (67-143)||(14945093-14945169)
[»] chr3 (4 HSPs)
chr3 (187-285)||(21793897-21793996)
chr3 (210-244)||(29704534-29704568)
chr3 (197-245)||(8968521-8968569)
chr3 (197-245)||(9734585-9734633)
[»] chr8 (6 HSPs)
chr8 (98-261)||(11107782-11107945)
chr8 (210-244)||(39533586-39533620)
chr8 (20-121)||(39533709-39533810)
chr8 (197-245)||(7995069-7995117)
chr8 (54-230)||(11248103-11248279)
chr8 (200-244)||(12784231-12784275)
[»] chr6 (4 HSPs)
chr6 (62-192)||(9050813-9050942)
chr6 (171-260)||(30147889-30147978)
chr6 (188-244)||(18748487-18748543)
chr6 (197-245)||(15950684-15950732)
[»] chr7 (3 HSPs)
chr7 (197-245)||(665124-665172)
chr7 (197-245)||(15455689-15455737)
chr7 (197-245)||(33972968-33973016)
[»] chr4 (5 HSPs)
chr4 (197-245)||(15065789-15065837)
chr4 (197-245)||(17459284-17459332)
chr4 (197-245)||(20089192-20089240)
chr4 (197-245)||(25553133-25553181)
chr4 (197-245)||(47782875-47782923)


Alignment Details
Target: chr2 (Bit Score: 312; Significance: 1e-176; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 22 - 474
Target Start/End: Original strand, 9834511 - 9834966
Alignment:
Q  22 atcatcaaaaatatgggagctaagtaaagacgtggatgcatttgttaattcgtggacaacctcgttcgcttgttttctagtaaacccaacacgagagttt 121  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  9834511 atcatcaaaaatacgggagctaagtaaagacgtggatgcatttgttaattcgtggacaacctcgttcgcttgtcttctagtaaacccaacacgagagttt 9834610  T
Q  122 gttaaataaagagaacaataatatatgttaatgtccatgataatgtcatattcggtgatgtcgtcattgcttcgattgaaatagtcaactactcgtttcg 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9834611 gttaaataaagagaacaataatatatgttaatgtccatgataatgccatattcggtgatgtcgtcattgcttcgattgaaatagtcaactactcgtttcg 9834710  T
Q  222 aatcaacctcaaaatcaacatttggtagccgtaaatcatgtttccactgaatagcaggatacaaccccaaaacttctcctacatctattgagcataacag 321  Q
                ||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  9834711 ------------aatcaacatttggtagccgtaaatcatgtatccacttaatagcatgatacaaccccaaagcttctcctacatctattgagcataacag 9834798  T
Q  322 agtgaacca-aagcttctccaaag--------------ctccgtcacgtatacatgtgcatatgcccaatttatttgtggaagccgaaaagcaaagatct 406  Q
    ||||||||| | |||| |   |||              || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9834799 agtgaaccacatgcttttggcaagtacaaaacacccttcttcgtcacgtatacatgtgcatatgcccaatttatttgtggaagccgaaaagcaaagatct 9834898  T
Q  407 atgctgcattttagctgtccatatattagtttcttccacctgtatccaacactcatgttggccgtgac 474  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9834899 atgctgcattttagccgtccatatattagtttcttccacctgtatccaacactcatgttggctgtgac 9834966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 245
Target Start/End: Complemental strand, 18777209 - 18777160
Alignment:
Q  196 attgaaatagtcaactactcgtttcgaatcaacctcaaaatcaacatttg 245  Q
    ||||||||| ||| |||||  ||||||||||||||| |||||||||||||    
T  18777209 attgaaataatcagctacttttttcgaatcaacctcgaaatcaacatttg 18777160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 2e-41; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 23 - 261
Target Start/End: Complemental strand, 3461348 - 3461110
Alignment:
Q  23 tcatcaaaaatatgggagctaagtaaagacgtggatgcatttgttaattcgtggacaacctcgttcgcttgttttctagtaaacccaacacgagagtttg 122  Q
    ||||||||||||||  || || ||||| | |||| ||  |||| ||||| ||||| || ||| || | |||| ||||||||||| || || |||||||||    
T  3461348 tcatcaaaaatatgaaagttaggtaaatatgtggttgtctttgctaatttgtggataatctcatttgattgtcttctagtaaactcatcatgagagtttg 3461249  T
Q  123 ttaaataaagagaacaataatatatgttaatgtccatgataatgtcatattcggtgatgtcgtcattgcttcgattgaaatagtcaactactcgtttcga 222  Q
    |||||||||||||| |||||| ||||||  ||||||| ||||   || ||||  |||||| ||||||||||| ||||||||| ||| |||||||||| ||    
T  3461248 ttaaataaagagaataataatgtatgttgttgtccataataacaccaaattcattgatgttgtcattgcttccattgaaataatcagctactcgttttga 3461149  T
Q  223 atcaacctcaaaatcaacatttggtagccgtaaatcatg 261  Q
    || |||||||||||||| |||||||||||||||||||||    
T  3461148 attaacctcaaaatcaatatttggtagccgtaaatcatg 3461110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 28214411 - 28214467
Alignment:
Q  188 ttgcttcgattgaaatagtcaactactcgtttcgaatcaacctcaaaatcaacattt 244  Q
    |||||||| || ||||| ||  |||| ||||||||||||||||||||||||||||||    
T  28214411 ttgcttcggttaaaataatctgctacacgtttcgaatcaacctcaaaatcaacattt 28214467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 245
Target Start/End: Original strand, 26418922 - 26418970
Alignment:
Q  197 ttgaaatagtcaactactcgtttcgaatcaacctcaaaatcaacatttg 245  Q
    |||||||| ||| |||||  ||||||||| |||||||||||||||||||    
T  26418922 ttgaaataatcagctactgttttcgaatctacctcaaaatcaacatttg 26418970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 32108358 - 32108310
Alignment:
Q  197 ttgaaatagtcaactactcgtttcgaatcaacctcaaaatcaacatttg 245  Q
    |||||||| ||| |||||  ||||||||| |||||||||||||||||||    
T  32108358 ttgaaataatcagctactgttttcgaatctacctcaaaatcaacatttg 32108310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 245
Target Start/End: Original strand, 40454742 - 40454770
Alignment:
Q  217 tttcgaatcaacctcaaaatcaacatttg 245  Q
    |||||||||||||||||||||||||||||    
T  40454742 tttcgaatcaacctcaaaatcaacatttg 40454770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 4e-27; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 210 - 308
Target Start/End: Original strand, 14945192 - 14945290
Alignment:
Q  210 ctactcgtttcgaatcaacctcaaaatcaacatttggtagccgtaaatcatgtttccactgaatagcaggatacaaccccaaaacttctcctacatcta 308  Q
    ||||| ||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| || ||  |||||||||||||||    
T  14945192 ctacttgtttcgaatcaacttcaaaatcaacatttggtagtcgtaaatcatgtatccactgaatagcatgatacaaaccaaatgcttctcctacatcta 14945290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 204 - 273
Target Start/End: Original strand, 27200605 - 27200674
Alignment:
Q  204 agtcaactactcgtttcgaatcaacctcaaaatcaacatttggtagccgtaaatcatgtttccactgaat 273  Q
    ||||||||||   ||||||||||| ||||||||||||||||| |||||||||||||||  ||||||||||    
T  27200605 agtcaactacctttttcgaatcaatctcaaaatcaacatttgttagccgtaaatcatgaatccactgaat 27200674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 143
Target Start/End: Original strand, 14945093 - 14945169
Alignment:
Q  67 taattcgtggacaacctcgttcgcttgttttctagtaaacccaacacgagagtttgttaaataaagagaacaataat 143  Q
    |||||| ||||||||||| ||||  ||||||| ||||||| |||| | ||| |||||||||||||| ||||||||||    
T  14945093 taattcatggacaacctcattcgtctgttttcaagtaaactcaactcaagaatttgttaaataaagggaacaataat 14945169  T

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Target: chr3 (Bit Score: 52; Significance: 1e-20; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 187 - 285
Target Start/End: Complemental strand, 21793996 - 21793897
Alignment:
Q  187 attgcttcgattgaaatagtcaactactcgtttcgaatcaacctcaaaatcaacatttggtagccgtaaatca-tgtttccactgaatagcaggatacaa 285  Q
    |||||| ||||| ||||| ||||||||| ||||||| |||||||||||||||||||||||||||| ||||||| ||| ||||| ||||| || |||||||    
T  21793996 attgctccgattaaaataatcaactacttgtttcgagtcaacctcaaaatcaacatttggtagccataaatcattgtatccaccgaataacacgatacaa 21793897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 244
Target Start/End: Complemental strand, 29704568 - 29704534
Alignment:
Q  210 ctactcgtttcgaatcaacctcaaaatcaacattt 244  Q
    |||| ||||||||||||||||||||||||||||||    
T  29704568 ctacacgtttcgaatcaacctcaaaatcaacattt 29704534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 245
Target Start/End: Original strand, 8968521 - 8968569
Alignment:
Q  197 ttgaaatagtcaactactcgtttcgaatcaacctcaaaatcaacatttg 245  Q
    |||||||||||| |||||| ||| || |||||||| |||||||||||||    
T  8968521 ttgaaatagtcagctactcttttagagtcaacctcgaaatcaacatttg 8968569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 245
Target Start/End: Original strand, 9734585 - 9734633
Alignment:
Q  197 ttgaaatagtcaactactcgtttcgaatcaacctcaaaatcaacatttg 245  Q
    |||||||||||| |||||| ||| || |||||||| |||||||||||||    
T  9734585 ttgaaatagtcagctactcttttagagtcaacctcgaaatcaacatttg 9734633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000005; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 261
Target Start/End: Original strand, 11107782 - 11107945
Alignment:
Q  98 ctagtaaacccaacacgagagtttgttaaataaagagaacaataatatatgttaatgtccatgataatgtcatattcggtgatgtcgtcattgcttcgat 197  Q
    |||| |||| ||||||||||||||| |||| ||||||||||||| |   | ||| | ||||| || ||  || |||| ||||  ||  |||||| | | |    
T  11107782 ctagaaaactcaacacgagagtttggtaaaaaaagagaacaatagtgcctattactatccataatgatcccaaattctgtgacatcaccattgccttggt 11107881  T
Q  198 tgaaatagtcaactactcgtttcgaatcaacctcaaaatcaacatttggtagccgtaaatcatg 261  Q
    ||||||||||| |||| || |||||||| |||||||||||||||||| | ||| |||| |||||    
T  11107882 tgaaatagtcagctacgcgcttcgaatctacctcaaaatcaacattttgaagctgtaactcatg 11107945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 244
Target Start/End: Complemental strand, 39533620 - 39533586
Alignment:
Q  210 ctactcgtttcgaatcaacctcaaaatcaacattt 244  Q
    |||| ||||||||||||||||||||||||||||||    
T  39533620 ctacacgtttcgaatcaacctcaaaatcaacattt 39533586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 39533810 - 39533709
Alignment:
Q  20 acatcatcaaaaatatgggagctaagtaaagacgtggatgcatttgttaattcgtggacaacctcgttcgcttgttttctagtaaacccaacacgagagt 119  Q
    ||||||||||||||| || |||||   || || |||||||| |||| |||||||||| ||||| | ||||||||  | ||| ||||| ||||| ||||||    
T  39533810 acatcatcaaaaatacggaagctagtcaaggaagtggatgcctttgctaattcgtgggcaaccacattcgcttgcctcctaataaactcaacatgagagt 39533711  T
Q  120 tt 121  Q
    ||    
T  39533710 tt 39533709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 7995117 - 7995069
Alignment:
Q  197 ttgaaatagtcaactactcgtttcgaatcaacctcaaaatcaacatttg 245  Q
    |||||||| ||| |||||| |||||||||||||| ||||||||| ||||    
T  7995117 ttgaaataatcagctactcttttcgaatcaacctaaaaatcaacgtttg 7995069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 230
Target Start/End: Complemental strand, 11248279 - 11248103
Alignment:
Q  54 tggatgcatttgttaattcgtggacaacctcgttcgcttgttttctagtaaacccaacacgagagtttgttaaataaagagaacaataatatatgttaat 153  Q
    ||||||| |||| |||||| ||   |||||| |||| || | |||| |||||| ||||| ||||||||  ||||||||||  | |||| | ||||||| |    
T  11248279 tggatgcctttgctaattcatgtgtaacctcattcgtttttcttctggtaaactcaacatgagagtttcctaaataaagattataatattgtatgttact 11248180  T
Q  154 gtccatgataatgtcatattcggtgatgtcgtcattgcttcgattgaaatagtcaactactcgtttcgaatcaacct 230  Q
     ||||| || | |  ||||||  |||| |||||||| | ||| ||||| |||| | |||||| ||||||||||||||    
T  11248179 atccataatgacgctatattcaatgatatcgtcattacctcgcttgaactagttagctactcttttcgaatcaacct 11248103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 200 - 244
Target Start/End: Original strand, 12784231 - 12784275
Alignment:
Q  200 aaatagtcaactactcgtttcgaatcaacctcaaaatcaacattt 244  Q
    ||||| ||| |||||| ||||||||||||||||||| ||||||||    
T  12784231 aaataatcagctactcttttcgaatcaacctcaaaagcaacattt 12784275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 62 - 192
Target Start/End: Original strand, 9050813 - 9050942
Alignment:
Q  62 tttgttaattcgtggacaacctcgttcgcttgttttctagtaaacccaacacgagagtttgttaaataaagagaacaataatatatgttaatgtccatga 161  Q
    |||||||||||||||||||||||  ||| ||| ||  ||||||||  || | |||||||| || |||||||||||||||| | ||||| | | ||||| |    
T  9050813 tttgttaattcgtggacaacctcagtcgtttgcttcatagtaaacttaataggagagtttatt-aataaagagaacaatagtgtatgtgactatccataa 9050911  T
Q  162 taatgtcatattcggtgatgtcgtcattgct 192  Q
    |||   || ||||| ||||||||||||||||    
T  9050912 taacaccaaattcgatgatgtcgtcattgct 9050942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 171 - 260
Target Start/End: Complemental strand, 30147978 - 30147889
Alignment:
Q  171 attcggtgatgtcgtcattgcttcgattgaaatagtcaactactcgtttcgaatcaacctcaaaatcaacatttggtagccgtaaatcat 260  Q
    |||||||||| || || ||||  ||||| || |||||| | ||||| ||||||||||| |||||||| |||||||| |||||||| ||||    
T  30147978 attcggtgatatcttcgttgccccgattaaagtagtcagccactcgcttcgaatcaacttcaaaatccacatttggaagccgtaattcat 30147889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 18748543 - 18748487
Alignment:
Q  188 ttgcttcgattgaaatagtcaactactcgtttcgaatcaacctcaaaatcaacattt 244  Q
    |||||||| || ||||| ||  |||| ||||||||||||||||||||||||||||||    
T  18748543 ttgcttcggttaaaataatctgctacacgtttcgaatcaacctcaaaatcaacattt 18748487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 15950732 - 15950684
Alignment:
Q  197 ttgaaatagtcaactactcgtttcgaatcaacctcaaaatcaacatttg 245  Q
    |||||||| ||| |||||  ||||||||| |||||||||||||||||||    
T  15950732 ttgaaataatcagctactgttttcgaatctacctcaaaatcaacatttg 15950684  T

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Target: chr7 (Bit Score: 29; Significance: 0.0000007; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 245
Target Start/End: Original strand, 665124 - 665172
Alignment:
Q  197 ttgaaatagtcaactactcgtttcgaatcaacctcaaaatcaacatttg 245  Q
    |||||||| ||| |||||| ||| |||||||||||||||||||| ||||    
T  665124 ttgaaataatcagctactctttttgaatcaacctcaaaatcaacgtttg 665172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 15455737 - 15455689
Alignment:
Q  197 ttgaaatagtcaactactcgtttcgaatcaacctcaaaatcaacatttg 245  Q
    |||||||| ||| |||||  ||||||||| |||||||||||||||||||    
T  15455737 ttgaaataatcagctactgttttcgaatctacctcaaaatcaacatttg 15455689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 33973016 - 33972968
Alignment:
Q  197 ttgaaatagtcaactactcgtttcgaatcaacctcaaaatcaacatttg 245  Q
    |||||||| ||| |||||||||| || |||||||| |||||||||||||    
T  33973016 ttgaaataatcagctactcgttttgagtcaacctcgaaatcaacatttg 33972968  T

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Target: chr4 (Bit Score: 29; Significance: 0.0000007; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 15065837 - 15065789
Alignment:
Q  197 ttgaaatagtcaactactcgtttcgaatcaacctcaaaatcaacatttg 245  Q
    |||||||| |||||||||| ||| || ||||| ||||||||||||||||    
T  15065837 ttgaaataatcaactactcttttagagtcaacttcaaaatcaacatttg 15065789  T

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Target: chr4; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 17459332 - 17459284
Alignment:
Q  197 ttgaaatagtcaactactcgtttcgaatcaacctcaaaatcaacatttg 245  Q
    |||||||| |||||||||| ||| || |||||||| |||||||||||||    
T  17459332 ttgaaataatcaactactcttttagagtcaacctcgaaatcaacatttg 17459284  T

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Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 245
Target Start/End: Original strand, 20089192 - 20089240
Alignment:
Q  197 ttgaaatagtcaactactcgtttcgaatcaacctcaaaatcaacatttg 245  Q
    ||||||||||||  ||||| ||| || ||||||||||||||||||||||    
T  20089192 ttgaaatagtcagttactctttttgagtcaacctcaaaatcaacatttg 20089240  T

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Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 25553181 - 25553133
Alignment:
Q  197 ttgaaatagtcaactactcgtttcgaatcaacctcaaaatcaacatttg 245  Q
    |||||||||||| |||||| ||| || |||||||| |||||||||||||    
T  25553181 ttgaaatagtcagctactcttttagagtcaacctcgaaatcaacatttg 25553133  T

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Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 197 - 245
Target Start/End: Complemental strand, 47782923 - 47782875
Alignment:
Q  197 ttgaaatagtcaactactcgtttcgaatcaacctcaaaatcaacatttg 245  Q
    |||||||| ||| |||||  ||||||||| |||||||||||||||||||    
T  47782923 ttgaaataatcagctactgttttcgaatctacctcaaaatcaacatttg 47782875  T

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