View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3476_high_11 (Length: 311)
Name: NF3476_high_11
Description: NF3476
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3476_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 5 - 282
Target Start/End: Complemental strand, 47117113 - 47116840
Alignment:
| Q |
5 |
gaagatggtgatgttggcgttcccgttgagctttgttgcctatcatacattctccgcctatccatctacaaaacaagaaattaaaaataatcgttaaaag |
104 |
Q |
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| T |
47117113 |
gaagacggtgatgttggcgttcccgttgagctttgttgcctatcatacattctccgcctatccatctacaaaacaagaaattaaaaataatcgttaaaag |
47117014 |
T |
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| Q |
105 |
gtgatcgatcgagtcattgatacgttgatattgcttaccttgctttgtgatttgatcgttaaaaggtatgaatatttatctccttgaattgaaactaaag |
204 |
Q |
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| T |
47117013 |
gtgatcga----gtcattgatacgttgatattgcttaccttgctttgtgatttgatcgttaaaaggtatgaatatttatctccttgaattgaaactaaag |
47116918 |
T |
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| Q |
205 |
atataaaagaaattggttattgaatatctttgataaaatataactattgtaattacctgagaagcgatgaaacaaaac |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47116917 |
atataaaagaaattggttattgaatatctttgataaaatataactattgtaattacctgagaagcgatgaaacaaaac |
47116840 |
T |
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