View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3480_low_5 (Length: 373)

Name: NF3480_low_5
Description: NF3480
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3480_low_5
NF3480_low_5
[»] chr6 (10 HSPs)
chr6 (11-356)||(23110222-23110567)
chr6 (79-227)||(10259850-10259998)
chr6 (21-205)||(14102297-14102482)
chr6 (16-157)||(11421459-11421600)
chr6 (31-194)||(23895639-23895802)
chr6 (29-143)||(12173473-12173587)
chr6 (31-194)||(18420553-18420716)
chr6 (31-194)||(22066295-22066457)
chr6 (31-194)||(23884494-23884656)
chr6 (79-143)||(24564684-24564748)
[»] chr7 (11 HSPs)
chr7 (75-290)||(19352656-19352870)
chr7 (31-194)||(15174542-15174705)
chr7 (31-194)||(14634801-14634963)
chr7 (31-194)||(14644501-14644663)
chr7 (31-194)||(15947396-15947558)
chr7 (31-194)||(33292200-33292362)
chr7 (31-194)||(7593008-7593171)
chr7 (31-194)||(9736948-9737110)
chr7 (31-190)||(32818002-32818160)
chr7 (27-190)||(4306577-4306739)
chr7 (75-123)||(48710075-48710123)
[»] chr2 (16 HSPs)
chr2 (137-323)||(37910212-37910398)
chr2 (31-194)||(24022765-24022928)
chr2 (21-194)||(14273206-14273379)
chr2 (31-194)||(31710489-31710652)
chr2 (40-185)||(1800501-1800646)
chr2 (40-185)||(22632410-22632555)
chr2 (211-323)||(27422260-27422368)
chr2 (96-327)||(18578564-18578785)
chr2 (40-185)||(1791007-1791148)
chr2 (31-143)||(35877568-35877680)
chr2 (31-143)||(35885057-35885169)
chr2 (31-143)||(36724770-36724882)
chr2 (270-348)||(1790823-1790898)
chr2 (270-348)||(1800317-1800392)
chr2 (270-348)||(22632226-22632301)
chr2 (75-148)||(3396970-3397043)
[»] chr1 (11 HSPs)
chr1 (21-194)||(5378437-5378611)
chr1 (187-327)||(26906455-26906590)
chr1 (75-193)||(26906313-26906431)
chr1 (31-194)||(40999058-40999222)
chr1 (31-194)||(14272041-14272203)
chr1 (31-194)||(14281907-14282069)
chr1 (75-148)||(21633627-21633700)
chr1 (101-194)||(30676790-30676883)
chr1 (101-194)||(15810078-15810170)
chr1 (40-148)||(28310046-28310152)
chr1 (42-148)||(21919465-21919571)
[»] chr5 (29 HSPs)
chr5 (31-193)||(42732600-42732761)
chr5 (150-337)||(37515004-37515191)
chr5 (40-185)||(5600588-5600733)
chr5 (40-185)||(5610234-5610379)
chr5 (31-194)||(22489187-22489350)
chr5 (32-194)||(30444853-30445015)
chr5 (40-185)||(31150667-31150812)
chr5 (31-194)||(24412830-24412993)
chr5 (31-194)||(30454224-30454387)
chr5 (187-327)||(16110718-16110856)
chr5 (31-148)||(18569086-18569204)
chr5 (31-148)||(24422324-24422442)
chr5 (31-148)||(30459282-30459400)
chr5 (46-190)||(22118140-22118285)
chr5 (270-348)||(5600404-5600479)
chr5 (270-348)||(5610050-5610125)
chr5 (31-194)||(20036001-20036163)
chr5 (270-348)||(31150921-31150996)
chr5 (46-140)||(26652674-26652768)
chr5 (46-140)||(26924259-26924353)
chr5 (75-194)||(4635947-4636066)
chr5 (31-143)||(20834483-20834595)
chr5 (31-143)||(33955523-33955635)
chr5 (270-344)||(1693956-1694027)
chr5 (43-194)||(11223378-11223527)
chr5 (270-348)||(17554077-17554152)
chr5 (31-184)||(13815396-13815548)
chr5 (42-143)||(22448364-22448465)
chr5 (117-179)||(16110898-16110960)
[»] chr8 (20 HSPs)
chr8 (31-194)||(20714071-20714234)
chr8 (31-194)||(15833952-15834115)
chr8 (31-193)||(31575434-31575595)
chr8 (31-194)||(7789101-7789264)
chr8 (46-148)||(24634015-24634117)
chr8 (31-194)||(12925356-12925518)
chr8 (31-194)||(42712201-42712363)
chr8 (31-148)||(12915506-12915623)
chr8 (75-194)||(12767633-12767751)
chr8 (31-194)||(20030181-20030343)
chr8 (31-194)||(20044820-20044982)
chr8 (42-148)||(42896183-42896289)
chr8 (75-140)||(24096143-24096208)
chr8 (31-149)||(4843745-4843863)
chr8 (31-149)||(18143452-18143570)
chr8 (42-148)||(33592168-33592274)
chr8 (42-148)||(33601807-33601913)
chr8 (44-149)||(25037062-25037167)
chr8 (44-149)||(25051099-25051204)
chr8 (31-143)||(18883183-18883295)
[»] chr4 (12 HSPs)
chr4 (75-248)||(45609388-45609567)
chr4 (40-185)||(23622927-23623072)
chr4 (43-194)||(15842933-15843084)
chr4 (31-194)||(37059088-37059251)
chr4 (31-148)||(3242310-3242428)
chr4 (189-326)||(41902729-41902863)
chr4 (31-148)||(54689936-54690054)
chr4 (31-148)||(54699367-54699485)
chr4 (31-194)||(26812510-26812673)
chr4 (31-194)||(26821977-26822140)
chr4 (31-148)||(3918113-3918231)
chr4 (42-194)||(20884483-20884634)
[»] chr3 (21 HSPs)
chr3 (29-194)||(38529198-38529363)
chr3 (95-194)||(7784095-7784194)
chr3 (40-185)||(17529893-17530038)
chr3 (40-185)||(54624663-54624808)
chr3 (31-148)||(24794569-24794687)
chr3 (40-185)||(32877878-32878023)
chr3 (31-143)||(5385742-5385854)
chr3 (31-148)||(28351743-28351861)
chr3 (31-148)||(28367676-28367794)
chr3 (31-148)||(28375494-28375612)
chr3 (31-148)||(28383316-28383434)
chr3 (75-171)||(24285411-24285507)
chr3 (270-348)||(17530147-17530222)
chr3 (270-348)||(17535086-17535161)
chr3 (40-185)||(48978678-48978819)
chr3 (40-185)||(48988218-48988359)
chr3 (95-194)||(4951595-4951693)
chr3 (75-194)||(23487043-23487161)
chr3 (270-348)||(48978494-48978569)
chr3 (270-348)||(48988034-48988109)
chr3 (31-148)||(13328301-13328418)
[»] scaffold0269 (1 HSPs)
scaffold0269 (40-185)||(14846-14991)
[»] scaffold0040 (2 HSPs)
scaffold0040 (50-194)||(10044-10188)
scaffold0040 (31-194)||(30846-31009)
[»] scaffold0482 (1 HSPs)
scaffold0482 (31-194)||(3535-3698)
[»] scaffold0101 (1 HSPs)
scaffold0101 (187-301)||(42179-42293)
[»] scaffold0247 (1 HSPs)
scaffold0247 (75-185)||(24601-24711)
[»] scaffold0028 (2 HSPs)
scaffold0028 (31-148)||(94454-94572)
scaffold0028 (31-148)||(103895-104013)
[»] scaffold0021 (2 HSPs)
scaffold0021 (75-185)||(99991-100101)
scaffold0021 (75-194)||(124049-124167)
[»] scaffold0001 (1 HSPs)
scaffold0001 (31-148)||(408375-408493)
[»] scaffold0010 (1 HSPs)
scaffold0010 (31-143)||(257010-257122)
[»] scaffold0206 (1 HSPs)
scaffold0206 (31-194)||(2111-2273)
[»] scaffold0223 (1 HSPs)
scaffold0223 (78-143)||(27127-27192)
[»] scaffold0053 (1 HSPs)
scaffold0053 (75-148)||(2328-2401)


Alignment Details
Target: chr6 (Bit Score: 318; Significance: 1e-179; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 11 - 356
Target Start/End: Original strand, 23110222 - 23110567
Alignment:
Q  11 cacagaagaaaattaccctagttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttct 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||  ||||| ||||||||| ||||||||||||||||| ||||||| ||||||||||    
T  23110222 cacagaagaaaattaccctagttcacgaaaaccagctacttccagtccccacaccccgtgttagattatccactatagtattcggctaacagaaacttct 23110321  T
Q  111 gactagcactatatgttcttgatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattctttctcaaactattatgaa 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23110322 gactagcactatatgttcttgatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattctttctcaaactattatgaa 23110421  T
Q  211 aaatagacttgagaattaaaataaaatttgtatgatgaagggtttttgttggatctagatttctcaacacttgtttgagagtaggatgaaaaacaaactc 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23110422 aaatagacttgagaattaaaataaaatttgtatgatgaagggtttttgttggatctagatttctcaacacttgtttgagagtaggatgaaaaacaaactc 23110521  T
Q  311 aaaagattatgatccaagatataatgaaagagtagaagcagaatgt 356  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  23110522 aaaagattatgatccaagatataatgaaagagtagaagcagaatgt 23110567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 79 - 227
Target Start/End: Original strand, 10259850 - 10259998
Alignment:
Q  79 tccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacaccagataagtctattacacccaatattatcaacatcaacag 178  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||  |||||||||||||||||| ||||  ||||||||  |||||| ||| |||||||    
T  10259850 tccactatagtatcctgctaagagaaacttctgactagcactataaattcttgatcacaccagatcagtccgttacaccctgtattataaacctcaacag 10259949  T
Q  179 gcttctaaaattctttctcaaactattatgaaaaatagacttgagaatt 227  Q
      ||||||| ||||||||||||||||||||| |||||||||||||||||    
T  10259950 agttctaaacttctttctcaaactattatgacaaatagacttgagaatt 10259998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 205
Target Start/End: Complemental strand, 14102482 - 14102297
Alignment:
Q  21 aattaccctagttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagta-tccggctaatagaaacttctgactagcac 119  Q
    ||||| ||| |||||| ||| |||||||||||||||  ||||| | | ||| | |||||||||||||||  ||  ||||| |||||||| ||||||||||    
T  14102482 aattatcctggttcaccaaacccggctacttccagtccccacacctcttgtgagattatccactatagttgtcttgctaacagaaacttttgactagcac 14102383  T
Q  120 tatatgttcttgatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattctttctcaaactatt 205  Q
    | || | ||||||||||| ||||| || || ||||||||  |||||| ||| ||| ||| |||||| |||||||||||||||||||    
T  14102382 tgtaaggtcttgatcacaacagatcagcctgttacaccctgtattattaacctcagcagacttctacaattctttctcaaactatt 14102297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 16 - 157
Target Start/End: Original strand, 11421459 - 11421600
Alignment:
Q  16 aagaaaattaccctagttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgacta 115  Q
    |||| ||||| |||||||||  ||| |||||||||||||||  ||||| | ||||| | ||||||||||||||||||  | ||| | ||| |||||||||    
T  11421459 aagataattatcctagttcatcaaatccggctacttccagtccccacacctcgtgtgagattatccactatagtatcatgttaacaaaaaattctgacta 11421558  T
Q  116 gcactatatgttcttgatcacaccagataagtctattacacc 157  Q
     ||||||| | ||||||||||||||||| ||||| |||||||    
T  11421559 acactataagatcttgatcacaccagatcagtctgttacacc 11421600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 31 - 194
Target Start/End: Original strand, 23895639 - 23895802
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccg-gctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| |||||||||||||||  ||||| | ||||| | ||||||||||||||| | |  ||||| ||||||||||||||||||||| |   |||    
T  23895639 gttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaatatct 23895738  T
Q  130 tgatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    |||||||||||||| ||||  ||||| ||  |||||||||| ||| ||||||| || ||||||||    
T  23895739 tgatcacaccagatcagtccgttaca-cctgtattatcaacctcagcaggcttatacaattcttt 23895802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 143
Target Start/End: Complemental strand, 12173587 - 12173473
Alignment:
Q  29 tagttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttc 128  Q
    |||||||| |||  ||||||||| ||||  ||||| |  |||| | ||||||||||||||||||  ||||| |||||||| |||||||||| |||  |||    
T  12173587 tagttcaccaaactcggctactttcagtccccacaccttgtgtaagattatccactatagtatcatgctaacagaaacttatgactagcaccataaattc 12173488  T
Q  129 ttgatcacaccagat 143  Q
    |||||||||||||||    
T  12173487 ttgatcacaccagat 12173473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 18420716 - 18420553
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccg-gctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| |||||||||||||||  | ||| | ||||| | ||||| ||||||||| | |  ||||| |||||||||||||||||||||     |||    
T  18420716 gttcacaaaacccggctacttccagtcccgacacctcgtgtgagattatacactatagttttcttgctaacagaaacttctgactagcactaacaaatct 18420617  T
Q  130 tgatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    |||||||||||||| ||||  ||||| ||  |||||||||| ||| ||||||| || ||||||||    
T  18420616 tgatcacaccagatcagtccgttaca-cctgtattatcaacctcagcaggcttatacaattcttt 18420553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 22066457 - 22066295
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||||||||  |||||   ||||| | ||||||||||||||||| | | |  ||||||||||| || | ||||||| | ||||    
T  22066457 gttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttctaaccaacactataaggtctt 22066358  T
Q  131 gatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    |||||||| |||| ||||  | || | |  |||||||||| ||| |||||||||| ||||||||    
T  22066357 gatcacactagatcagtccgtaac-cactgtattatcaacctcagcaggcttctacaattcttt 22066295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 23884656 - 23884494
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||||||||  |||||   ||||| | ||| ||||||||||||| | | |  ||||||||||| || | ||||||| | ||||    
T  23884656 gttcaccaaacccggctacttccagtccccacacttcgtgtgagattgtccactatagtatgcagttggtagaaacttctaaccaacactataaggtctt 23884557  T
Q  131 gatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    ||||||||||||| ||||  | || | |  |||||||||| ||| |||||||||| ||||||||    
T  23884556 gatcacaccagatcagtccgtaac-cactgtattatcaacctcagcaggcttctacaattcttt 23884494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 24564684 - 24564748
Alignment:
Q  79 tccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacaccagat 143  Q
    ||||||||| ||| |  ||| ||||||||||||| || ||||||||||||||||||||| |||||    
T  24564684 tccactataatattcaactactagaaacttctgaataacactatatgttcttgatcacatcagat 24564748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 2e-40; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 75 - 290
Target Start/End: Original strand, 19352656 - 19352870
Alignment:
Q  75 attatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacaccagataagtctattacacccaatattatcaacatca 174  Q
    ||||||||||||||| ||| ||||| |||||||||||||| | ||||||  ||| ||||||||||||||   ||  ||||||||  |||||| ||| |||    
T  19352656 attatccactatagtctcctgctaacagaaacttctgacttgtactataaattcctgatcacaccagatctttccgttacaccctgtattatgaacctca 19352755  T
Q  175 acaggcttctaaaattctttctcaaactattatgaaaaatagacttgagaattaaaataaaatttgtatgatgaagggtttttgttggatctagat-ttc 273  Q
     |||||||||| | |||||||||||| |||||||| |||||||||||||||||| || | ||||||||||||||| |||||||| |||||| || | |||    
T  19352756 tcaggcttctacacttctttctcaaattattatgacaaatagacttgagaattacaacacaatttgtatgatgaa-ggtttttg-tggatcaagctattc 19352853  T
Q  274 tcaacacttgtttgaga 290  Q
    |||||||||||||||||    
T  19352854 tcaacacttgtttgaga 19352870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 15174705 - 15174542
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccg-gctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| |||||||||||||||  ||||| | ||||| | ||||||||||||||| | |  ||||| | ||||||||||||||||||| | | |||    
T  15174705 gttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacaaaaacttctgactagcactacaagatct 15174606  T
Q  130 tgatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    |||||||||||||| ||||  ||||| ||  |||||||||| ||| ||||||| || ||||||||    
T  15174605 tgatcacaccagatcagtccgttaca-cctgtattatcaacctcagcaggcttatataattcttt 15174542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 31 - 194
Target Start/End: Original strand, 14634801 - 14634963
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||||||||  |||||   ||||| | ||||||||||||||||| | |||  ||||||||||| || | ||||||| | ||||    
T  14634801 gttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagctggtagaaacttctaaccaacactataaggtctt 14634900  T
Q  131 gatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    ||||||||||||| ||||  | || | |  |||||||||| ||| |||||||||| ||||||||    
T  14634901 gatcacaccagatcagtccgtaac-cactgtattatcaacctcagcaggcttctacaattcttt 14634963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 194
Target Start/End: Original strand, 14644501 - 14644663
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||||||||  |||||   ||||| | ||||||||||||||||| | | |  ||||||||||| || | ||||||| | ||||    
T  14644501 gttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttctaaccaacactataaggtctt 14644600  T
Q  131 gatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    ||||||||||||| ||||  | || | |  |||||||||| ||| |||||||||| ||||||||    
T  14644601 gatcacaccagatcagtccgtaac-cactgtattatcaacctcagcaggcttctacaattcttt 14644663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 194
Target Start/End: Original strand, 15947396 - 15947558
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||||||||  |||||   ||||| | ||||||||||||||||| | | |  ||||||||||| || | ||||||| | ||||    
T  15947396 gttcaccaaacccggctacttccagtcaccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttctaaccaacactataaggtctt 15947495  T
Q  131 gatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    ||||||||||||| ||||  | || | |  |||||||||| ||| |||||||||| ||||||||    
T  15947496 gatcacaccagatcagtccgtaac-cactgtattatcaacctcagcaggcttctacaattcttt 15947558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 194
Target Start/End: Original strand, 33292200 - 33292362
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||||||||  |||||   ||||| | ||||||||||||||||| | | |  ||||||||||| || | ||||||| | ||||    
T  33292200 gttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttctaaccaacactataaggtctt 33292299  T
Q  131 gatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    ||||||||||||| ||||  | || | |  |||||||||| ||| |||||||||| ||||||||    
T  33292300 gatcacaccagatcagtccgtaac-cactgtattatcaacctcagcaggcttctacaattcttt 33292362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 7593171 - 7593008
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccg-gctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| | |||||||||||||  ||||| | ||||| | |||||||| |||||| | |  ||||| ||||||||||||||||||||| |   |||    
T  7593171 gttcaccaaacctggctacttccagtccccacacctcgtgtgagattatccattatagttttcttgctaacagaaacttctgactagcactacaatatct 7593072  T
Q  130 tgatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    |||||||||||||| ||||  | ||| ||  |||||||||| ||| ||||||| || ||||||||    
T  7593071 tgatcacaccagatcagtccgtaaca-cctgtattatcaacctcatcaggcttatacaattcttt 7593008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 9737110 - 9736948
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||||||||  |||||   ||||| | |||||||| |||||||| | | |  ||||||||||| || | ||||||| |  |||    
T  9737110 gttcactaaacccggctacttccagtccccacacttcgtgtgagattatccattatagtattcagtttgtagaaacttctaaccaacactataaggcctt 9737011  T
Q  131 gatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    ||||||||||||| |||||  ||  |||  |||||||||| ||| |||||||||| ||||||||    
T  9737010 gatcacaccagatcagtct-gtagcccctgtattatcaacctcagcaggcttctacaattcttt 9736948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 190
Target Start/End: Complemental strand, 32818160 - 32818002
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||||| ||  |||||   ||||| | ||||||||||||||||| | | |  ||||||||||| || | ||||||| | ||||    
T  32818160 gttcaccaaacccggctacttccggtccccacacttcgtgtgagattatccactatagtattcagttggtagaaacttctaaccaacactataaggtctt 32818061  T
Q  131 gatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaatt 190  Q
    ||||||||||||| ||||| | || |||  |||||||||| ||  |||||||||| ||||    
T  32818060 gatcacaccagatcagtctgtaac-ccctgtattatcaacctccgcaggcttctacaatt 32818002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 190
Target Start/End: Original strand, 4306577 - 4306739
Alignment:
Q  27 cctagttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgt 126  Q
    |||||||||| ||| || ||||||||||||| |||||   || || | ||| || ||||||||||||  |||  |||||||| ||| ||||||  |||||    
T  4306577 cctagttcaccaaagccagctacttccagttcccacacttcgagtgagattttctactatagtatccaactatcagaaacttatgaatagcac--tatgt 4306674  T
Q  127 tcttgatcacaccagataagt-ctattacacccaatattatcaacatcaacaggcttctaaaatt 190  Q
    | ||||||||||||||| ||| | ||||||| |  |||||||||| ||| ||| |||||| ||||    
T  4306675 tgttgatcacaccagatcagtccgattacactctgtattatcaacctcagcagacttctacaatt 4306739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 123
Target Start/End: Original strand, 48710075 - 48710123
Alignment:
Q  75 attatccactatagtatccggctaatagaaacttctgactagcactata 123  Q
    ||||||||||||||||| | |||| ||||||||||| ||||||||||||    
T  48710075 attatccactatagtattcagctagtagaaacttctaactagcactata 48710123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 2e-37; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 137 - 323
Target Start/End: Complemental strand, 37910398 - 37910212
Alignment:
Q  137 accagataagtctattacacccaatattatcaacatcaacaggcttctaaaattctttctcaaactattatgaaaaatagacttgagaattaaaataaaa 236  Q
    ||||||| ||||| |||||| |  |||||| ||||||  || ||||||| |||||||| |||||||||| | | ||||||| |||||||||||| || ||    
T  37910398 accagatcagtctgttacactctgtattataaacatcggcatgcttctacaattctttttcaaactattgtaataaatagatttgagaattaaagtacaa 37910299  T
Q  237 tttgtatgatgaa-gggtttttgttggatctagatttctcaacacttgtttgagagtaggatgaaaaacaaactcaaaagattatgat 323  Q
    ||||||||||||| || |||||||||||||  ||||||||||||| ||||||||| || ||| |||||||||||||||||||||||||    
T  37910298 tttgtatgatgaatggttttttgttggatcacgatttctcaacacatgtttgagattatgat-aaaaacaaactcaaaagattatgat 37910212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 31 - 194
Target Start/End: Original strand, 24022765 - 24022928
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagta-tccggctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| ||||||||||||| || ||||| | ||||| | |||||||||||||||  ||  ||||| ||||||||||||||||||||||| | |||    
T  24022765 gttcaccaaacccggctacttccaattcccacacctcgtgtgagattatccactatagttgtcttgctaacagaaacttctgactagcactataagatct 24022864  T
Q  130 tgatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    |||||||||||||| ||||  ||||| ||  |||||||||| |||||||||||||| ||||||||    
T  24022865 tgatcacaccagatcagtccgttaca-cctgtattatcaacctcaacaggcttctacaattcttt 24022928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 194
Target Start/End: Complemental strand, 14273379 - 14273206
Alignment:
Q  21 aattaccctagttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagta-tccggctaatagaaacttctgactagcac 119  Q
    ||||| ||| |||||| ||| |||||||||| |||| |||||| | ||||| | |||||||||||||||  ||  ||||| |||||||||||||||||||    
T  14273379 aattatcctggttcaccaaacccggctactttcagtctccacacctcgtgtgagattatccactatagttgtcttgctaacagaaacttctgactagcac 14273280  T
Q  120 tatatgttcttgatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    |||| | |||| ||||||||| || ||||| ||||| || ||||||||||| ||| |||||||||| ||||||||    
T  14273279 tataagatcttaatcacaccatatcagtctgttaca-cctatattatcaacctcagcaggcttctacaattcttt 14273206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 31 - 194
Target Start/End: Original strand, 31710489 - 31710652
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagta-tccggctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| |||||||||||||||  ||||| | ||||| | |||||||||||||||  ||  ||||| ||||||||||||||||||||||| | |||    
T  31710489 gttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacagaaacttctgactagcactataagatct 31710588  T
Q  130 tgatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    |||||||||||||| ||||  ||||| ||  |||||||||| ||| ||| |||||| ||||||||    
T  31710589 tgatcacaccagatcagtccgttaca-cctgtattatcaacctcagcagacttctacaattcttt 31710652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 185
Target Start/End: Complemental strand, 1800646 - 1800501
Alignment:
Q  40 aaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacacc 139  Q
    |||||||||| ||||||  |||||   ||||| | ||||||||||||||||||| ||||  |||||||||||| ||||||||||   | |||||||||||    
T  1800646 aaccggctacgtccagtccccacactacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacacc 1800547  T
Q  140 agataagtctattacacccaatattatcaacatcaacaggcttcta 185  Q
    |||| ||||  |||||| |  |||||||||| ||| ||||||||||    
T  1800546 agatcagtccgttacactctgtattatcaacctcagcaggcttcta 1800501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 185
Target Start/End: Complemental strand, 22632555 - 22632410
Alignment:
Q  40 aaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacacc 139  Q
    |||||||||| ||||||  |||||   ||||| | ||||||||||||||||||| ||||  ||||||||||||||| |||||||   | |||||||||||    
T  22632555 aaccggctacgtccagtccccacactacgtgtgagattatccactatagtatcctgctatcagaaacttctgactaacactataatatgttgatcacacc 22632456  T
Q  140 agataagtctattacacccaatattatcaacatcaacaggcttcta 185  Q
    |||| ||||  |||||| |  |||||||||| ||| ||||||||||    
T  22632455 agatcagtccgttacactctgtattatcaacctcagcaggcttcta 22632410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 211 - 323
Target Start/End: Complemental strand, 27422368 - 27422260
Alignment:
Q  211 aaatagacttgagaattaaaataaaatttgtatgatgaagggtttttgttggatctagatttctcaacacttgtttgagagtaggatgaaaaacaaactc 310  Q
    |||||||||||||||||||| || |||||||||||||||||| ||||||||||||  |||||| |||||| ||||||||| |  |||  ||| |||||||    
T  27422368 aaatagacttgagaattaaa-tacaatttgtatgatgaaggg-ttttgttggatcatgatttcccaacacatgtttgagattttgat--aaatcaaactc 27422273  T
Q  311 aaaagattatgat 323  Q
    ||| |||||||||    
T  27422272 aaatgattatgat 27422260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 327
Target Start/End: Complemental strand, 18578785 - 18578564
Alignment:
Q  96 ctaatagaaacttctgactagcactatatgttcttgatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattctttc 195  Q
    |||| |||||||| ||||||| |||||| ||||||||| ||||||||  | ||| ||||||||  |||||||||| ||| || |||   | |||| ||||    
T  18578785 ctaacagaaacttttgactaggactataagttcttgataacaccagaccaatctgttacaccctgtattatcaacctcatcaagcta--acaattatttc 18578688  T
Q  196 tcaaactattatgaaaaatagacttgagaattaaaataaaatttgtatgatgaagggtttttgttggatctagatttctcaacacttgtttgagagtagg 295  Q
      |||||||| | |  ||||  |||||||| |||| || |||||||| ||||||||| ||| |||||||| | |||||||||||| ||||||||| |       
T  18578687 --aaactattgtaacgaata--cttgagaactaaattacaatttgtaagatgaagggattt-gttggatcgaaatttctcaacacatgtttgagatttaa 18578593  T
Q  296 atgaaaaacaaactcaaaagattatgatccaa 327  Q
    ||   |||||||||||||||||||||||||||    
T  18578592 at---aaacaaactcaaaagattatgatccaa 18578564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 40 - 185
Target Start/End: Complemental strand, 1791148 - 1791007
Alignment:
Q  40 aaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacacc 139  Q
    |||||||||| ||||||  |||||   ||||| | |||||||||||||||||||  |    |||||||||||| ||||||||||   | |||||||||||    
T  1791148 aaccggctacgtccagtccccacactacgtgtgagattatccactatagtatccatc----agaaacttctgaatagcactataatatgttgatcacacc 1791053  T
Q  140 agataagtctattacacccaatattatcaacatcaacaggcttcta 185  Q
    |||| ||||  |||||| |  |||||||||| ||| ||||||||||    
T  1791052 agatcagtccgttacactctgtattatcaacctcagcaggcttcta 1791007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 35877680 - 35877568
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||||||||  |||||   ||||| | ||||||||||||||||| | | |  ||||||||||| || | ||||||| | ||||    
T  35877680 gttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttctaaccaacactataaggtctt 35877581  T
Q  131 gatcacaccagat 143  Q
    |||||||||||||    
T  35877580 gatcacaccagat 35877568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 35885169 - 35885057
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||||||||  |||||   ||||| | ||||||||||||||||| | | |  ||||||||||| || | ||||||| | ||||    
T  35885169 gttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttctaaccaacactataaggtctt 35885070  T
Q  131 gatcacaccagat 143  Q
    |||||||||||||    
T  35885069 gatcacaccagat 35885057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 36724882 - 36724770
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||||||||  |||||   ||||| | ||||||||||||||||| | | |  ||||||||||| || | ||||||| | ||||    
T  36724882 gttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttctaaccaacactataaggtctt 36724783  T
Q  131 gatcacaccagat 143  Q
    |||||||||||||    
T  36724782 gatcacaccagat 36724770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 1790898 - 1790823
Alignment:
Q  270 tttctcaacacttgtttgagagtaggatgaaaaacaaactcaaaagattatgatccaagatataatgaaagagtagaag 348  Q
    ||||||||||||||||||||| || |||  |||||||||| ||||||||||||||||| || || || |||||||||||    
T  1790898 tttctcaacacttgtttgagattatgat--aaaacaaacttaaaagattatgatccaa-atctagtgcaagagtagaag 1790823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 1800392 - 1800317
Alignment:
Q  270 tttctcaacacttgtttgagagtaggatgaaaaacaaactcaaaagattatgatccaagatataatgaaagagtagaag 348  Q
    ||||||||||||||||||||| || |||  |||||||||| ||||||||||||||||| || || || |||||||||||    
T  1800392 tttctcaacacttgtttgagattatgat--aaaacaaacttaaaagattatgatccaa-atctagtgcaagagtagaag 1800317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 22632301 - 22632226
Alignment:
Q  270 tttctcaacacttgtttgagagtaggatgaaaaacaaactcaaaagattatgatccaagatataatgaaagagtagaag 348  Q
    |||||||| |||||||||||| || |||  |||||||||| ||||||||||||||||| || || ||||||||||||||    
T  22632301 tttctcaatacttgtttgagattatgat--aaaacaaacttaaaagattatgatccaa-atctagtgaaagagtagaag 22632226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 3397043 - 3396970
Alignment:
Q  75 attatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacaccagataagtc 148  Q
    ||||||||||||||||| | | |  ||||||||||| || | ||||||| | ||||||||||||||||| ||||    
T  3397043 attatccactatagtatacagttggtagaaacttctaaccaacactataaggtcttgatcacaccagatcagtc 3396970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 194
Target Start/End: Original strand, 5378437 - 5378611
Alignment:
Q  21 aattaccctagttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagta-tccggctaatagaaacttctgactagcac 119  Q
    ||||| ||| |||||| ||| |||||||||||||||  ||||| | ||||| | |||||||||||||||  ||  ||||| |||||||||| ||||||||    
T  5378437 aattatcctggttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacagaaacttctaactagcac 5378536  T
Q  120 tatatgttcttgatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    |||| | ||||||||||||||||| ||||| |||||||| ||||||| ||| ||| ||| |||||| ||||||||    
T  5378537 tataaggtcttgatcacaccagatcagtctgttacaccctatattataaacctcagcagacttctacaattcttt 5378611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 187 - 327
Target Start/End: Original strand, 26906455 - 26906590
Alignment:
Q  187 aattctttctcaaactattatgaaaaatagacttgagaattaaaataaaatttgtatgatgaagggtttttgttggatctagatttctcaacacttgttt 286  Q
    ||||||||||||||||||||||| ||||||||||||| | ||||||| ||||||||||||||| ||  ||||||||||| | |||||||||||| |||||    
T  26906455 aattctttctcaaactattatgacaaatagacttgag-actaaaatacaatttgtatgatgaaagg-atttgttggatcgaaatttctcaacacatgttt 26906552  T
Q  287 gagagtaggatgaaaaacaaactcaaaagattatgatccaa 327  Q
    |||| |   ||   |||||||||||||||||||||||||||    
T  26906553 gagatttaaat---aaacaaactcaaaagattatgatccaa 26906590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 26906313 - 26906431
Alignment:
Q  75 attatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacaccagataagtctattacacccaatattatcaacatca 174  Q
    |||||||| |||| ||||  | ||| ||||||||||||||||||||||| ||||||| ||||||||||| ||||| |||||| |  |||||||||| |||    
T  26906313 attatccattataatatcttgttaacagaaacttctgactagcactataagttcttggtcacaccagatcagtctgttacactctgtattatcaacctca 26906412  T
Q  175 acaggcttctaaaattctt 193  Q
     ||| ||| || |||||||    
T  26906413 gcagacttttacaattctt 26906431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 194
Target Start/End: Original strand, 40999058 - 40999222
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagta-tccggctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| ||| | |||||||||  ||||| | ||||| | |||||||||||||||  ||  |||||  ||||||| |||||||||||||| | | |    
T  40999058 gttcaccaaacccgacaacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacggaaacttatgactagcactataaggttt 40999157  T
Q  130 tgatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    |||||||||||||| ||| | |||||||   |||||||||| ||||||| |||||| ||||||||    
T  40999158 tgatcacaccagatcagtttgttacaccatgtattatcaacctcaacagacttctacaattcttt 40999222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 194
Target Start/End: Original strand, 14272041 - 14272203
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||||||||  |||||   ||||| | ||||||||||||||||| | | |  ||||||||||| || | ||||||| | ||||    
T  14272041 gttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttctaacaaacactataaggtctt 14272140  T
Q  131 gatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    ||||||||||||| ||||  | || | |  |||||||||| ||| |||||||||| ||||||||    
T  14272141 gatcacaccagatcagtccgtaac-cactgtattatcaacctcagcaggcttctacaattcttt 14272203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 194
Target Start/End: Original strand, 14281907 - 14282069
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||||||||  |||||   ||||| | ||||||||||||||||| | | |  ||||||||||| || | ||||||| | ||||    
T  14281907 gttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttctaacaaacactataaggtctt 14282006  T
Q  131 gatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    ||||||||||||| ||||  | || | |  |||||||||| ||| |||||||||| ||||||||    
T  14282007 gatcacaccagatcagtccgtaac-cactgtattatcaacctcagcaggcttctacaattcttt 14282069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 148
Target Start/End: Complemental strand, 21633700 - 21633627
Alignment:
Q  75 attatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacaccagataagtc 148  Q
    ||||||||||||||||| |  ||| ||||||||||||||||||| |||| | ||||| ||||||||||| ||||    
T  21633700 attatccactatagtattctactagtagaaacttctgactagcattataaggtcttggtcacaccagatcagtc 21633627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 194
Target Start/End: Complemental strand, 30676883 - 30676790
Alignment:
Q  101 agaaacttctgactagcactatatgttcttgatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    |||||||| ||| ||||||||||||||||||||||||| |||| ||||| |||||| |  |||||||||  ||||||  ||| || ||||||||    
T  30676883 agaaacttatgaatagcactatatgttcttgatcacacaagatcagtctgttacactctgtattatcaatctcaacatacttatataattcttt 30676790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 194
Target Start/End: Original strand, 15810078 - 15810170
Alignment:
Q  101 agaaacttctgactagcactatatgttcttgatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    |||||||||||| |||||||||| | ||||||||||||||||| ||||  ||||| ||  |||||||||| ||  || ||||||| ||||||||    
T  15810078 agaaacttctgagtagcactataaggtcttgatcacaccagatcagtccgttaca-cctgtattatcaacttcggcatgcttctacaattcttt 15810170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 148
Target Start/End: Original strand, 28310046 - 28310152
Alignment:
Q  40 aaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacacc 139  Q
    |||||||||||||| |||||||||   |||||    |||||||||||||||||| ||||  | ||||||| || || ||||||| ||| |||||||||||    
T  28310046 aaccggctacttccggtttccacactacgtgtgg--ttatccactatagtatcctgctatcaaaaacttccgaataacactataagttgttgatcacacc 28310143  T
Q  140 agataagtc 148  Q
    |||| ||||    
T  28310144 agatcagtc 28310152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 148
Target Start/End: Original strand, 21919465 - 21919571
Alignment:
Q  42 ccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacaccag 141  Q
    |||||||||||||||  |||||   ||||| | ||||||||||||||| | | | |  ||||||||||| || | ||||||| | |||||||||||||||    
T  21919465 ccggctacttccagtccccacacttcgtgtgagattatccactatagttttcagttggtagaaacttctaaccaacactataaggtcttgatcacaccag 21919564  T
Q  142 ataagtc 148  Q
    || ||||    
T  21919565 atcagtc 21919571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 3e-27; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 31 - 193
Target Start/End: Original strand, 42732600 - 42732761
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||||||||  |||||   ||||| | ||||||||||||||||| | |||| ||||||||||| |||||||||||| | ||||    
T  42732600 gttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagctagtagaaacttctaactagcactataaggtctt 42732699  T
Q  131 gatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattctt 193  Q
    ||||||||||||| |||| |  || |||  |||||||||| |||||||||||||| |||||||    
T  42732700 gatcacaccagatcagtccagaac-ccctgtattatcaacctcaacaggcttctacaattctt 42732761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 150 - 337
Target Start/End: Original strand, 37515004 - 37515191
Alignment:
Q  150 attacacccaatattatcaacatcaacaggcttctaaaattctttctcaaactattatgaaaaatagacttgagaattaaaataaaatttgtatgatgaa 249  Q
    |||||||||  |||||||||  |||| |  |||||  ||||||||||||||||||||| |||||||||||| |||||||||||| |||||||   |||||    
T  37515004 attacaccctgtattatcaatctcaataaacttctgcaattctttctcaaactattataaaaaatagacttaagaattaaaatacaatttgt---atgaa 37515100  T
Q  250 gg--gtttttgttggatctagatttctcaacacttgtttgaga-gtaggatgaaaaacaaactcaaaagattatgatccaagatataatga 337  Q
    ||   ||||||||||| |  ||||| | ||||| |||||||||  || |||||||||| || ||||||||||||||||||| |||||||||    
T  37515101 ggttttttttgttggaccacgatttgttaacacatgtttgagatttaagatgaaaaactaattcaaaagattatgatccaaaatataatga 37515191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 40 - 185
Target Start/End: Complemental strand, 5600733 - 5600588
Alignment:
Q  40 aaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacacc 139  Q
    |||||||||| ||||||  ||||| | ||||| | ||||||||||||||||||| ||||  |||||||||||| ||||||||||   | |||||||||||    
T  5600733 aaccggctacgtccagtccccacaccacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacacc 5600634  T
Q  140 agataagtctattacacccaatattatcaacatcaacaggcttcta 185  Q
    |||| ||||  |||||| |  |||||||||| ||| ||||||||||    
T  5600633 agatcagtccgttacactctgtattatcaacctcagcaggcttcta 5600588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 40 - 185
Target Start/End: Complemental strand, 5610379 - 5610234
Alignment:
Q  40 aaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacacc 139  Q
    |||||||||| ||||||  ||||| | ||||| | ||||||||||||||||||| ||||  |||||||||||| ||||||||||   | |||||||||||    
T  5610379 aaccggctacgtccagtccccacaccacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacacc 5610280  T
Q  140 agataagtctattacacccaatattatcaacatcaacaggcttcta 185  Q
    |||| ||||  |||||| |  |||||||||| ||| ||||||||||    
T  5610279 agatcagtccgttacactctgtattatcaacctcagcaggcttcta 5610234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 22489350 - 22489187
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagta-tccggctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| |||||||||||||||  ||||| | ||||| | |||||||||||||||  ||  ||||| |||||||| |||||||||||||| | |||    
T  22489350 gttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacagaaacttatgactagcactataagatct 22489251  T
Q  130 tgatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    |||||||||||||| ||||  ||||| ||  |||||||||| ||| ||| |||||| ||||||||    
T  22489250 tgatcacaccagatcagtccgttaca-cctgtattatcaacctcagcagacttctacaattcttt 22489187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 32 - 194
Target Start/End: Original strand, 30444853 - 30445015
Alignment:
Q  32 ttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccg-gctaatagaaacttctgactagcactatatgttctt 130  Q
    ||||| ||| |||||||||||||||  ||||| | ||||| | ||||||||||||||| | |  ||||| ||||||||||||||||||||| |  |||||    
T  30444853 ttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaatttctt 30444952  T
Q  131 gatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    ||||||||||||| |||| || ||| ||  |||||||||| ||| ||||||| || ||||||||    
T  30444953 gatcacaccagatcagtccataaca-cctgtattatcaacctcagcaggcttatacaattcttt 30445015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 185
Target Start/End: Original strand, 31150667 - 31150812
Alignment:
Q  40 aaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacacc 139  Q
    |||||||||| ||||||  |||||   ||||| | ||||||||||||||||||| ||||  |||||||||||| ||||||||||   | |||||||||||    
T  31150667 aaccggctacgtccagtccccacactacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacacc 31150766  T
Q  140 agataagtctattacacccaatattatcaacatcaacaggcttcta 185  Q
    |||| ||||  |||||| |  |||||||||| ||| ||||||||||    
T  31150767 agatcagtccgttacactctgtattatcaacctcagcaggcttcta 31150812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 24412993 - 24412830
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccg-gctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| |||||||||||||||  ||||| | ||||| | ||||||||||||||| | |  ||||| ||||||||||||||||||||| |  ||||    
T  24412993 gttcaccaaatccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaatttct 24412894  T
Q  130 tgatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    |||||||||||||| ||||| | || | |  |||||||||| ||| ||||||| || ||||||||    
T  24412893 tgatcacaccagatcagtctgtaac-ctctgtattatcaacctcagcaggcttatacaattcttt 24412830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 31 - 194
Target Start/End: Original strand, 30454224 - 30454387
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccg-gctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| |||||||||||||||  ||||| | ||||| | ||||||||||||||| | |  ||||| ||||||||||||||||||||| |  ||||    
T  30454224 gttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaatttct 30454323  T
Q  130 tgatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    |||||||||||||| ||||  | ||| ||  |||||||||| ||| ||||||| || ||||||||    
T  30454324 tgatcacaccagatcagtccgtaaca-cctgtattatcaacctcagcaggcttatacaattcttt 30454387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 187 - 327
Target Start/End: Complemental strand, 16110856 - 16110718
Alignment:
Q  187 aattctttctcaaactattatgaa-aaatagacttgagaattaaaataaaatttgtatgatgaagggtttttgttggatctagatttctcaacacttgtt 285  Q
    |||||| |||||||||||| | || ||||||||||||||| || | || |||||||| ||||||||| ||| ||| ||||  ||||||||||||||||||    
T  16110856 aattctctctcaaactattgtaaacaaatagacttgagaactatattacaatttgtaagatgaagggattt-gttagatcatgatttctcaacacttgtt 16110758  T
Q  286 tgagagtaggatgaaaaacaaactcaaaagattatgatccaa 327  Q
    ||||| |  |||  |||||||| | |||||||||||||||||    
T  16110757 tgagattttgat--aaaacaaagtaaaaagattatgatccaa 16110718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 18569204 - 18569086
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccg-gctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| |||||||||||||||  ||||| | ||||| | ||||||||||||||| | |  ||||| ||||||||||||||||||||| |  ||||    
T  18569204 gttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaatttct 18569105  T
Q  130 tgatcacaccagataagtc 148  Q
    |||||||||||||| ||||    
T  18569104 tgatcacaccagatcagtc 18569086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 24422442 - 24422324
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccg-gctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| |||||||||||||||  ||||| | ||||| | ||||||||||||||| | |  ||||| ||||||||||||||||||||| |  ||||    
T  24422442 gttcaccaaatccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaatttct 24422343  T
Q  130 tgatcacaccagataagtc 148  Q
    |||||||||||||| ||||    
T  24422342 tgatcacaccagatcagtc 24422324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 30459282 - 30459400
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccg-gctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| |||||||||||||||  ||||| | ||||| | ||||||||||||||| | |  ||||| ||||||||||||||||||||| |  ||||    
T  30459282 gttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaatttct 30459381  T
Q  130 tgatcacaccagataagtc 148  Q
    |||||||||||||| ||||    
T  30459382 tgatcacaccagatcagtc 30459400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 46 - 190
Target Start/End: Original strand, 22118140 - 22118285
Alignment:
Q  46 ctacttccagtttccacatcccgtgttaaattatccactatagta-tccggctaatagaaacttctgactagcactatatgttcttgatcacaccagata 144  Q
    |||||||||||  ||||| | ||||| | |||||||| ||||||  ||  ||||| |||||||||||| || ||||||| | |||||||||||||||||     
T  22118140 ctacttccagtccccacacctcgtgtgagattatccattatagttgtcttgctaacagaaacttctgaataacactataaggtcttgatcacaccagatc 22118239  T
Q  145 agtctattacacccaatattatcaacatcaacaggcttctaaaatt 190  Q
    ||||| ||||| ||  |||||||||||||| || ||||||| ||||    
T  22118240 agtctgttacatcctgtattatcaacatcagcatgcttctacaatt 22118285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 5600479 - 5600404
Alignment:
Q  270 tttctcaacacttgtttgagagtaggatgaaaaacaaactcaaaagattatgatccaagatataatgaaagagtagaag 348  Q
    ||||||||||||||||||||| || |||  |||||||||| ||||||||||||||||| || || ||||||||||||||    
T  5600479 tttctcaacacttgtttgagattatgat--aaaacaaacttaaaagattatgatccaa-atctagtgaaagagtagaag 5600404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 5610125 - 5610050
Alignment:
Q  270 tttctcaacacttgtttgagagtaggatgaaaaacaaactcaaaagattatgatccaagatataatgaaagagtagaag 348  Q
    ||||||||||||||||||||| || |||  |||||||||| ||||||||||||||||| || || ||||||||||||||    
T  5610125 tttctcaacacttgtttgagattatgat--aaaacaaacttaaaagattatgatccaa-atctagtgaaagagtagaag 5610050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 20036163 - 20036001
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||||||||  |||||   | ||| | ||||||||||||||||| | | |  ||||||||||| || | ||||||| | ||||    
T  20036163 gttcaccaaacccggctacttccagtccccacacatcatgtgagattatccactatagtatacagttggtagaaacttctaaccaacactataaggtctt 20036064  T
Q  131 gatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    ||||||||||||| |||| || || | | ||||||||||| | | |||||||||| ||||||||    
T  20036063 gatcacaccagatcagtccataac-cactatattatcaaccttagcaggcttctacaattcttt 20036001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 31150921 - 31150996
Alignment:
Q  270 tttctcaacacttgtttgagagtaggatgaaaaacaaactcaaaagattatgatccaagatataatgaaagagtagaag 348  Q
    ||||||||||||||||||||| || |||  |||||||||| ||||||||||||||||| || || ||||||||||||||    
T  31150921 tttctcaacacttgtttgagattatgat--aaaacaaacttaaaagattatgatccaa-atctagtgaaagagtagaag 31150996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 46 - 140
Target Start/End: Complemental strand, 26652768 - 26652674
Alignment:
Q  46 ctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacacca 140  Q
    |||||||||||  |||||   ||||| | || |||||||||||||| | |||||||||||||||| |||||||||||  | ||||||||||||||    
T  26652768 ctacttccagtccccacacttcgtgtgagataatccactatagtattcagctaatagaaacttctaactagcactattaggtcttgatcacacca 26652674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 46 - 140
Target Start/End: Complemental strand, 26924353 - 26924259
Alignment:
Q  46 ctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacacca 140  Q
    |||||||||||  |||||   ||||| | || |||||||||||||| | |||||||||||||||| |||||||||||  | ||||||||||||||    
T  26924353 ctacttccagtccccacacttcgtgtgagataatccactatagtattcagctaatagaaacttctaactagcactattaggtcttgatcacacca 26924259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 75 - 194
Target Start/End: Complemental strand, 4636066 - 4635947
Alignment:
Q  75 attatccactatagta-tccggctaatagaaacttctgactagcactatatgttcttgatcacaccagataagtctattacacccaatattatcaacatc 173  Q
    |||||||||||||||  ||  ||||| ||||||||||||| ||||||||| | |||||||||||||| || ||||  ||||| ||  | |||||||| ||    
T  4636066 attatccactatagttgtcttgctaacagaaacttctgaccagcactataagatcttgatcacaccatatcagtccgttaca-cctgttttatcaacctc 4635968  T
Q  174 aacaggcttctaaaattcttt 194  Q
    | |||||||||| ||||||||    
T  4635967 agcaggcttctacaattcttt 4635947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 20834595 - 20834483
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||||||||  |||||  |||||| | ||||||||||||||||| | | |  ||||||||||| || | ||||||| | ||||    
T  20834595 gttcaccaaacccggctacttccagtccccacactccgtgtgagattatccactatagtatgcagttggtagaaacttctaaccaacactataaggtctt 20834496  T
Q  131 gatcacaccagat 143  Q
    ||||| |||||||    
T  20834495 gatcataccagat 20834483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 143
Target Start/End: Original strand, 33955523 - 33955635
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||||||||  |||||   ||||| | ||||||||||||||||| | | |  ||||||||||| || | ||||||| | ||||    
T  33955523 gttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttctaaccaacactataaggtctt 33955622  T
Q  131 gatcacaccagat 143  Q
    |||||||||||||    
T  33955623 gatcacaccagat 33955635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 344
Target Start/End: Original strand, 1693956 - 1694027
Alignment:
Q  270 tttctcaacacttgtttgagagtaggatgaaaaacaaactcaaaagattatgatccaagatataatgaaagagta 344  Q
    ||||||||||||||||||||| || |||  |||||||||| |||| |||||||||||| ||||| ||||||||||    
T  1693956 tttctcaacacttgtttgagattatgat--aaaacaaacttaaaaaattatgatccaa-atatagtgaaagagta 1694027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 194
Target Start/End: Complemental strand, 11223527 - 11223378
Alignment:
Q  43 cggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacaccaga 142  Q
    ||||||||||||||  |||||   ||||| | |||||||| |||||||| | | |  ||||||||||| || | ||||||| | ||||||||||||||||    
T  11223527 cggctacttccagtccccacacttcgtgtgagattatccattatagtatacag-tggtagaaacttctaaccaacactataaggtcttgatcacaccaga 11223429  T
Q  143 taagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    | ||||| | || |||  |||||||||| ||| |||||||||| ||||||||    
T  11223428 tcagtctgtaac-ccctgtattatcaacctcagcaggcttctacaattcttt 11223378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 17554077 - 17554152
Alignment:
Q  270 tttctcaacacttgtttgagagtaggatgaaaaacaaactcaaaagattatgatccaagatataatgaaagagtagaag 348  Q
    ||||||||||||||||||||| || |||  |||||||||| ||||||||||||||||| || || ||||||| ||||||    
T  17554077 tttctcaacacttgtttgagattatgat--aaaacaaacttaaaagattatgatccaa-atctagtgaaagaatagaag 17554152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 31 - 184
Target Start/End: Original strand, 13815396 - 13815548
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||||||||  |||||   | ||| | ||||||||||||||||| | | |  ||||||||||| || | ||||||| | ||||    
T  13815396 gttcaccaaatccggctacttccagtccccacacttcatgtgagattatccactatagtattcagttggtagaaacttctaaccaacactataaggtctt 13815495  T
Q  131 gatcacaccagataagtctattacacccaatattatcaacatcaacaggcttct 184  Q
    ||||||||||||| | ||| | || ||   |||||||||| |||||||||||||    
T  13815496 gatcacaccagatcattctgtaac-ccttgtattatcaacctcaacaggcttct 13815548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 143
Target Start/End: Original strand, 22448364 - 22448465
Alignment:
Q  42 ccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacaccag 141  Q
    |||||||||||||||  |||||   ||||| | ||||||||||||||||| | | |  ||||||||||| || | ||||||| | |||||||||||||||    
T  22448364 ccggctacttccagtccccacacttcgtgtgagattatccactatagtatacagttggtagaaacttctaaccaacactataaggtcttgatcacaccag 22448463  T
Q  142 at 143  Q
    ||    
T  22448464 at 22448465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 179
Target Start/End: Complemental strand, 16110960 - 16110898
Alignment:
Q  117 cactatatgttcttgatcacaccagataagtctattacacccaatattatcaacatcaacagg 179  Q
    ||||||||||||||||||||||||||  | ||| |||||  |  |||||||||||||||||||    
T  16110960 cactatatgttcttgatcacaccagaccaatctgttacattctgtattatcaacatcaacagg 16110898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 4e-26; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 20714234 - 20714071
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagta-tccggctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| |||||||||||||||  ||||| | ||||| | |||||||| ||||||  ||  ||||| ||||||||||||||||||||||| | |||    
T  20714234 gttcaccaaacccggctacttccagtccccacacctcgtgtgacattatccattatagttgtcttgctaacagaaacttctgactagcactataagatct 20714135  T
Q  130 tgatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    |||||||||||||| ||||| ||||| ||  |||||||||| ||| |||||||||| ||||||||    
T  20714134 tgatcacaccagatcagtctgttaca-cctgtattatcaacctcagcaggcttctacaattcttt 20714071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 15834115 - 15833952
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||| ||||   |||| | ||||| | |||||||| |||||||||  |||||  |||||||||||||||||||||| ||||||    
T  15834115 gttcaccaaatccggctactttcagtccacacacctcgtgtgagattatccattatagtatcatgctaactgaaacttctgactagcactataagttctt 15834016  T
Q  131 gatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    || || |||||||||||   |||| |||  ||||||||||||||  ||| ||||| ||||||||    
T  15834015 gaccataccagataagttcgttactccctgtattatcaacatcagtaggtttctacaattcttt 15833952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 31 - 193
Target Start/End: Original strand, 31575434 - 31575595
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||||||||  |||||   ||||| | ||||||||||||||||| | |||| ||||||||||| |||||||||||| | ||||    
T  31575434 gttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagctagtagaaacttctaactagcactataaggtctt 31575533  T
Q  131 gatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattctt 193  Q
    |||||||||| || |||| |  || |||  |||||||||| ||| || ||||||| |||||||    
T  31575534 gatcacaccaaatcagtccagaac-ccctgtattatcaacctcagcaagcttctacaattctt 31575595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 31 - 194
Target Start/End: Original strand, 7789101 - 7789264
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagta-tccggctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| |||||||||||||||  ||||| | ||||| | |||||||||||||||  ||  ||||| ||||||||||||||||||||| |  ||||    
T  7789101 gttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacagaaacttctgactagcactacaatttct 7789200  T
Q  130 tgatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    |||||||||||||| ||||| | || | |  |||||||||| ||| ||||||| || ||||||||    
T  7789201 tgatcacaccagatcagtctgtaac-ctctgtattatcaacctcagcaggcttatacaattcttt 7789264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 46 - 148
Target Start/End: Complemental strand, 24634117 - 24634015
Alignment:
Q  46 ctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacaccagataa 145  Q
    |||||||||||  |||||   ||||| | ||||||||||||||||| | |||| ||||||||||| |||||||||||| | ||||||||||||||||| |    
T  24634117 ctacttccagtccccacacttcgtgtgatattatccactatagtattcagctagtagaaacttctaactagcactataaggtcttgatcacaccagatca 24634018  T
Q  146 gtc 148  Q
    |||    
T  24634017 gtc 24634015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 12925518 - 12925356
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||||||| ||| |||||||||||  |||||   ||||| | ||||||||||||||||| | | |  ||||||||||| || | ||||||| | ||||    
T  12925518 gttcacgaaacccgactacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttctaaccaacactataaggtctt 12925419  T
Q  131 gatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    ||||||||||||| ||||  | || | |  |||||||||| ||| |||||||||| ||||||||    
T  12925418 gatcacaccagatcagtccgtaac-cactgtattatcaacctcagcaggcttctacaattcttt 12925356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 194
Target Start/End: Original strand, 42712201 - 42712363
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||||||||  |||||   ||||| | ||||||||||||||||| | | |  ||||||||||| || | ||||||| | ||||    
T  42712201 gttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttctaaccaacactataaggtctt 42712300  T
Q  131 gatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    ||||||||||||| ||||  | || | |  |||||||||| ||| |||||||||| ||||||||    
T  42712301 gatcacaccagatcagtccgtaac-cactgtattatcaacctcagcaggcttctacaattcttt 42712363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 12915623 - 12915506
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||||||||  |||||   ||||| | ||||||||||||||||| | | |  ||||||||||| || | ||||||| | ||||    
T  12915623 gttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttctaaccaacactataaggtctt 12915524  T
Q  131 gatcacaccagataagtc 148  Q
    ||||||||||||| ||||    
T  12915523 gatcacaccagatcagtc 12915506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 194
Target Start/End: Complemental strand, 12767751 - 12767633
Alignment:
Q  75 attatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacaccagataagtctattacacccaatattatcaacatca 174  Q
    ||||||||||||||||| | | |  ||||||||||| || | ||||||| | ||||||||||||||||| ||||  | || |||  |||||||||| |||    
T  12767751 attatccactatagtattcagttggtagaaacttctaaccaacactataaggtcttgatcacaccagatcagtccgtaac-ccctgtattatcaacctca 12767653  T
Q  175 acaggcttctaaaattcttt 194  Q
     |||||||||| ||||||||    
T  12767652 gcaggcttctacaattcttt 12767633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 20030343 - 20030181
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||||||||  |||||   ||||| | ||||||||||||||||| | | |  || |||||||| || | ||||||| | ||||    
T  20030343 gttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatacagttggtataaacttctaaccaacactataaggtctt 20030244  T
Q  131 gatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    ||||||||||||| ||||   ||  |||  |||||||||| ||| |||||||||| ||||||||    
T  20030243 gatcacaccagatcagtc-cgtaatccctgtattatcaacctcagcaggcttctacaattcttt 20030181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 20044982 - 20044820
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||| ||||||  |||||   ||||| | ||||||||| ||||||| | | |  ||||||||||| || | ||||||| | ||||    
T  20044982 gttcaccaaacccggctacatccagtccccacacttcgtgtgagattatccacgatagtatacagttggtagaaacttctaaccaacactataaggtctt 20044883  T
Q  131 gatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    ||||||||||||| ||||  | || |||  |||||||||| ||| |||||||||| ||||||||    
T  20044882 gatcacaccagatcagtccgtaac-ccctgtattatcaacctcagcaggcttctacaattcttt 20044820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 148
Target Start/End: Original strand, 42896183 - 42896289
Alignment:
Q  42 ccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacaccag 141  Q
    ||||||||||||||| ||||||   ||||| | ||||||||||||||  | | | | |||||||||||| || | ||||||| | |||||||||||||||    
T  42896183 ccggctacttccagtctccacacttcgtgtgagattatccactatagatttcagttgatagaaacttctaaccaacactataaggtcttgatcacaccag 42896282  T
Q  142 ataagtc 148  Q
    || ||||    
T  42896283 atcagtc 42896289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 140
Target Start/End: Original strand, 24096143 - 24096208
Alignment:
Q  75 attatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacacca 140  Q
    ||||||||||||||||||  ||||| | |||||| |||||||||||| | ||||||||| ||||||    
T  24096143 attatccactatagtatcttgctaacataaacttttgactagcactacaagttcttgattacacca 24096208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 149
Target Start/End: Original strand, 4843745 - 4843863
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||||||||  |||||   ||||| | ||||||||||||||||| | | |  |||||| |||| || |  |||||| | ||||    
T  4843745 gttcactaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggtagaaatttctaaccaagactataaggtctt 4843844  T
Q  131 gatcacaccagataagtct 149  Q
    ||||||||||||| |||||    
T  4843845 gatcacaccagatcagtct 4843863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 149
Target Start/End: Original strand, 18143452 - 18143570
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||||||||  |||||   ||||| | |||||||||||||| || | | |  || |||||||| || | ||||||| | ||||    
T  18143452 gttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagcattcagttggtaaaaacttctaaccaacactataaggtctt 18143551  T
Q  131 gatcacaccagataagtct 149  Q
    ||||||||||||| |||||    
T  18143552 gatcacaccagatcagtct 18143570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 148
Target Start/End: Original strand, 33592168 - 33592274
Alignment:
Q  42 ccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacaccag 141  Q
    |||||||||||||||  |||||   ||||| | ||||||||||||||| | | | | | ||||||||||||| | ||||||| | |||||||||||| ||    
T  33592168 ccggctacttccagtccccacacttcgtgtgagattatccactatagttttcagttgacagaaacttctgaccaacactataaggtcttgatcacactag 33592267  T
Q  142 ataagtc 148  Q
    || ||||    
T  33592268 atcagtc 33592274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 42 - 148
Target Start/End: Original strand, 33601807 - 33601913
Alignment:
Q  42 ccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacaccag 141  Q
    |||||||||||||||  |||||   ||||| | ||||||||||||||| | | | | | ||||||||||||| | ||||||| | |||||||||||| ||    
T  33601807 ccggctacttccagtccccacacttcgtgtgagattatccactatagttttcagttgacagaaacttctgaccaacactataaggtcttgatcacactag 33601906  T
Q  142 ataagtc 148  Q
    || ||||    
T  33601907 atcagtc 33601913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 149
Target Start/End: Original strand, 25037062 - 25037167
Alignment:
Q  44 ggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacaccagat 143  Q
    |||||||||||||  |||||   ||||| | ||||||||||||||||| | | |  ||||||||||| || | |||||||   |||||||||||||||||    
T  25037062 ggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggtagaaacttctaaccaacactataaagtcttgatcacaccagat 25037161  T
Q  144 aagtct 149  Q
     |||||    
T  25037162 cagtct 25037167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 149
Target Start/End: Original strand, 25051099 - 25051204
Alignment:
Q  44 ggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacaccagat 143  Q
    |||||||||||||  |||||   ||||| | ||||||||||||||||| | | |  ||||||||||| || | |||||||   |||||||||||||||||    
T  25051099 ggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggtagaaacttctaaccaacactataatgtcttgatcacaccagat 25051198  T
Q  144 aagtct 149  Q
     |||||    
T  25051199 cagtct 25051204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 143
Target Start/End: Original strand, 18883183 - 18883295
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||||||||  |||||   ||||| | ||||||||||||||||| | | |  |||||| |||| || | |||||||   ||||    
T  18883183 gttcaccaaatccggctacttccagtccccacacttcgtgtgagattatccactatagtattcagttggtagaaaattctaaccaacactataaagtctt 18883282  T
Q  131 gatcacaccagat 143  Q
    |||||||||||||    
T  18883283 gatcacaccagat 18883295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 45609567 - 45609388
Alignment:
Q  75 attatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacaccagataagtctattacacccaa-------tattatc 167  Q
    |||||||||||| ||||||  |||  |||||||| ||| ||||||||||||| |||||||||||||||| | ||| |||||| ||        |||||||    
T  45609567 attatccactatggtatccaactatcagaaacttttgaatagcactatatgtccttgatcacaccagatcaatctgttacactcagcactctgtattatc 45609468  T
Q  168 aacatcaacaggcttctaaaattctttctcaaactattatgaaaaatagacttgagaattaaaataaaatttgtatgatga 248  Q
    ||||||| || ||||||| |||||||||||| |||||| | |  |||||| || |||| ||||||||||||||||||||||    
T  45609467 aacatcagcatgcttctataattctttctcagactattgtaatgaatagagttaagaa-taaaataaaatttgtatgatga 45609388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 40 - 185
Target Start/End: Complemental strand, 23623072 - 23622927
Alignment:
Q  40 aaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacacc 139  Q
    |||||||||| ||||||  |||||   ||||| | ||||||||||||||||||| ||||  |||||||||||| ||||||||||   | |||||||||||    
T  23623072 aaccggctacgtccagtccccacactacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacacc 23622973  T
Q  140 agataagtctattacacccaatattatcaacatcaacaggcttcta 185  Q
    |||| ||||| |||||| |  |||||||||| ||| ||||||||||    
T  23622972 agatcagtctgttacactctgtattatcaacctcagcaggcttcta 23622927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 194
Target Start/End: Original strand, 15842933 - 15843084
Alignment:
Q  43 cggctacttccagtttccacatcccgtgttaaattatccactatagta-tccggctaatagaaacttctgactagcactatatgttcttgatcacaccag 141  Q
    ||||||||||||||  ||||| | ||||| | |||||||||||||||  ||  ||||| ||||||||||||||||||||||| | ||||||||||| |||    
T  15842933 cggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacagaaacttctgactagcactataagatcttgatcacatcag 15843032  T
Q  142 ataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    || ||||| ||||| ||  |||||||||| | | |||||||||| ||||||||    
T  15843033 atcagtctgttaca-cctgtattatcaacctaagcaggcttctacaattcttt 15843084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 37059251 - 37059088
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccg-gctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| |||||||||||||||  ||||| | ||||| | ||||||||||||||| | |  ||||| ||||||||||||||||||||| | | |||    
T  37059251 gttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaagatct 37059152  T
Q  130 tgatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    |||||||||||||| ||||  ||||| ||  |||||||||| ||| ||||||| || ||||||||    
T  37059151 tgatcacaccagatcagtccgttaca-cctgtattatcaacctcagcaggcttatacaattcttt 37059088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 3242310 - 3242428
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccg-gctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| |||||||||||||||  ||||| | ||||| | ||||||||||||||| | |  ||||| ||||||||||||||||||||| |  ||||    
T  3242310 gttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaatttct 3242409  T
Q  130 tgatcacaccagataagtc 148  Q
    |||||||||||||| ||||    
T  3242410 tgatcacaccagatcagtc 3242428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 189 - 326
Target Start/End: Original strand, 41902729 - 41902863
Alignment:
Q  189 ttctttctcaaactattatgaaaaatagacttgagaattaaaataaaatttgtatgatgaagggtttttgttggatctagatttctcaacacttgtttga 288  Q
    ||||||||||||||||| | | ||||||||||||||| || | || | |||||||  ||||||| ||||||||||||  ||||||||||||| |||||||    
T  41902729 ttctttctcaaactattgtaacaaatagacttgagaactagattacactttgtattgtgaaggg-ttttgttggatcacgatttctcaacacatgtttga 41902827  T
Q  289 gagtaggatgaaaaacaaactcaaaagattatgatcca 326  Q
    || || ||   |||| ||||||||| ||||||||||||    
T  41902828 gattatga--caaaataaactcaaatgattatgatcca 41902863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 54689936 - 54690054
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccg-gctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| |||||||||||||||  ||||| | ||||| | ||||||||||||||| | |  ||||| ||||||||||||||||||||| |  ||||    
T  54689936 gttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaatttct 54690035  T
Q  130 tgatcacaccagataagtc 148  Q
    |||||||||||||| ||||    
T  54690036 tgatcacaccagatcagtc 54690054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 54699367 - 54699485
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccg-gctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| |||||||||||||||  ||||| | ||||| | ||||||||||||||| | |  ||||| ||||||||||||||||||||| |  ||||    
T  54699367 gttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaatttct 54699466  T
Q  130 tgatcacaccagataagtc 148  Q
    |||||||||||||| ||||    
T  54699467 tgatcacaccagatcagtc 54699485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 26812673 - 26812510
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccg-gctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| |||||||||||||||  ||||| | ||||| | ||||||||||||||| | |  ||||| ||||||||||||||||||||| |   |||    
T  26812673 gttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaatatct 26812574  T
Q  130 tgatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    |||||||||||||| ||||  | ||| ||  |||||||||| ||| ||||||| || ||||||||    
T  26812573 tgatcacaccagatcagtccgtaaca-cctgtattatcaacctcagcaggcttatacaattcttt 26812510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 26822140 - 26821977
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccg-gctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| |||||||||||||||  ||||| | ||||| | ||||||||||||||| | |  ||||| ||||||||||||||||||||| |   |||    
T  26822140 gttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaatatct 26822041  T
Q  130 tgatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    |||||||||||||| ||||  | ||| ||  |||||||||| ||| ||||||| || ||||||||    
T  26822040 tgatcacaccagatcagtccgtaaca-cctgtattatcaacctcagcaggcttatacaattcttt 26821977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 3918231 - 3918113
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccg-gctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| |||||||||||||||  ||||| | ||||| | ||||||||||||||| | |  ||||| |||||||||||||||||| || |  ||||    
T  3918231 gttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcattacaatttct 3918132  T
Q  130 tgatcacaccagataagtc 148  Q
    |||||||||||||| ||||    
T  3918131 tgatcacaccagatcagtc 3918113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 194
Target Start/End: Original strand, 20884483 - 20884634
Alignment:
Q  42 ccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacaccag 141  Q
    |||||||||||||||  |||||   ||||| | ||||||||||||||||| | | |  ||||||||||| || | ||||||| | | |||||||||||||    
T  20884483 ccggctacttccagtccccacacttcgtgtgagattatccactatagtatgcagttggtagaaacttctaaccaacactataaggttttgatcacaccag 20884582  T
Q  142 ataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    || ||||  | || | |  |||||||||| ||| |||||||||| ||||||||    
T  20884583 atcagtccgtaac-cactgtattatcaacctcagcaggcttctacaattcttt 20884634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 29 - 194
Target Start/End: Original strand, 38529198 - 38529363
Alignment:
Q  29 tagttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagta-tccggctaatagaaacttctgactagcactatatgtt 127  Q
    |||||||| ||| |||||||||||||||  ||||| | ||||| | |||||||||||||||  ||  ||||| ||||| ||||||||||||||||| | |    
T  38529198 tagttcaccaaacccggctacttccagtgcccacacctcgtgtgagattatccactatagttgtcttgctaacagaaatttctgactagcactataagat 38529297  T
Q  128 cttgatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    |||||||||||||||| ||||| ||||| |   |||||||||| |||  ||||||||| ||||||||    
T  38529298 cttgatcacaccagatgagtctgttaca-cttgtattatcaacctcagtaggcttctacaattcttt 38529363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 95 - 194
Target Start/End: Original strand, 7784095 - 7784194
Alignment:
Q  95 gctaatagaaacttctgactagcactatatgttcttgatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    ||||| |||||||| |||||| ||||||| | ||||||||||||||||| ||||| ||||||||  |||||||||| ||| |||||||||| ||||||||    
T  7784095 gctaacagaaacttatgactaacactataaggtcttgatcacaccagatcagtctgttacaccctgtattatcaacctcagcaggcttctacaattcttt 7784194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 185
Target Start/End: Original strand, 17529893 - 17530038
Alignment:
Q  40 aaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacacc 139  Q
    |||||||||| ||||||  |||||   ||||| | ||||||||||||||||||| ||||  |||||||||||| ||||||||||   | |||||||||||    
T  17529893 aaccggctacgtccagtccccacactacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacacc 17529992  T
Q  140 agataagtctattacacccaatattatcaacatcaacaggcttcta 185  Q
    |||| ||||  |||||| |  |||||||||| ||| ||||||||||    
T  17529993 agatcagtccgttacactctgtattatcaacctcagcaggcttcta 17530038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 185
Target Start/End: Complemental strand, 54624808 - 54624663
Alignment:
Q  40 aaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacacc 139  Q
    |||||||||| ||||||  |||||   ||||| | ||||||||||||||||||| ||||  |||||||||||| ||||||||||   | ||||||| |||    
T  54624808 aaccggctacgtccagtccccacactacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcatacc 54624709  T
Q  140 agataagtctattacacccaatattatcaacatcaacaggcttcta 185  Q
    |||| ||||| |||||| |  |||||||||| ||| ||||||||||    
T  54624708 agatcagtctgttacactctgtattatcaacctcagcaggcttcta 54624663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 24794569 - 24794687
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccg-gctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| |||||||||||||||  ||||| | ||||| | ||||||||||||||| | |  ||||| ||||||||||||||||||||| |  ||||    
T  24794569 gttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaatttct 24794668  T
Q  130 tgatcacaccagataagtc 148  Q
    |||||||||||||| ||||    
T  24794669 tgatcacaccagatcagtc 24794687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 40 - 185
Target Start/End: Complemental strand, 32878023 - 32877878
Alignment:
Q  40 aaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacacc 139  Q
    |||||||||| ||||||  |||||   ||||| | ||||||||||||||||||  ||||  | |||||||||| || |||||||  || |||||||||||    
T  32878023 aaccggctacgtccagtccccacactacgtgtgagattatccactatagtatcatgctatcataaacttctgaataacactataatttgttgatcacacc 32877924  T
Q  140 agataagtctattacacccaatattatcaacatcaacaggcttcta 185  Q
    |||| ||||| |||||| |  |||||||||| ||| ||||||||||    
T  32877923 agatcagtctgttacactctgtattatcaacctcagcaggcttcta 32877878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 5385854 - 5385742
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||||||||  |||||   ||||| | ||||||||||||||||| | ||| |||||||||||| || | ||||||| | ||||    
T  5385854 gttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatacagctgatagaaacttctaaccaacactataaggtctt 5385755  T
Q  131 gatcacaccagat 143  Q
    |||||||||||||    
T  5385754 gatcacaccagat 5385742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 28351743 - 28351861
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccg-gctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| |||||||||||||||  ||||| | ||||| | ||||||||||||||| | |  ||||| ||||||||||||||||||||| |   |||    
T  28351743 gttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaatatct 28351842  T
Q  130 tgatcacaccagataagtc 148  Q
    |||||||||||||| ||||    
T  28351843 tgatcacaccagatcagtc 28351861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 28367676 - 28367794
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccg-gctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| |||||||||||||||  ||||| | ||||| | ||||||||||||||| | |  ||||| ||||||||||||||||||||| |   |||    
T  28367676 gttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaatatct 28367775  T
Q  130 tgatcacaccagataagtc 148  Q
    |||||||||||||| ||||    
T  28367776 tgatcacaccagatcagtc 28367794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 28375494 - 28375612
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccg-gctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| |||||||||||||||  ||||| | ||||| | ||||||||||||||| | |  ||||| ||||||||||||||||||||| |   |||    
T  28375494 gttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaatatct 28375593  T
Q  130 tgatcacaccagataagtc 148  Q
    |||||||||||||| ||||    
T  28375594 tgatcacaccagatcagtc 28375612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 28383316 - 28383434
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccg-gctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| |||||||||||||||  ||||| | ||||| | ||||||||||||||| | |  ||||| ||||||||||||||||||||| |   |||    
T  28383316 gttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaatatct 28383415  T
Q  130 tgatcacaccagataagtc 148  Q
    |||||||||||||| ||||    
T  28383416 tgatcacaccagatcagtc 28383434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 75 - 171
Target Start/End: Complemental strand, 24285507 - 24285411
Alignment:
Q  75 attatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacaccagataagtctattacacccaatattatcaaca 171  Q
    ||||||||||||||||| | ||||  ||||||||   | ||||||| |||||||||||||||||| |||   |||||||||| ||||||||||||||    
T  24285507 attatccactatagtattcagctatcagaaactttcaaatagcactgtatgttcttgatcacaccggattgctctattacactcaatattatcaaca 24285411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 17530147 - 17530222
Alignment:
Q  270 tttctcaacacttgtttgagagtaggatgaaaaacaaactcaaaagattatgatccaagatataatgaaagagtagaag 348  Q
    ||||||||||||||||||||| || |||  |||||||||| ||||||||||||||||| || || ||||||||||||||    
T  17530147 tttctcaacacttgtttgagattatgat--aaaacaaacttaaaagattatgatccaa-atctagtgaaagagtagaag 17530222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 270 - 348
Target Start/End: Original strand, 17535086 - 17535161
Alignment:
Q  270 tttctcaacacttgtttgagagtaggatgaaaaacaaactcaaaagattatgatccaagatataatgaaagagtagaag 348  Q
    ||||||||||||||||||||| || |||  |||||||||| ||||||||||||||||| || || ||||||||||||||    
T  17535086 tttctcaacacttgtttgagattatgat--aaaacaaacttaaaagattatgatccaa-atctagtgaaagagtagaag 17535161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 40 - 185
Target Start/End: Complemental strand, 48978819 - 48978678
Alignment:
Q  40 aaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacacc 139  Q
    |||||||||| ||||||  |||||   ||||| | |||||||||||||||||||  |    |||||||||||| ||||||||||   | |||||||||||    
T  48978819 aaccggctacgtccagtccccacactacgtgtgagattatccactatagtatccatc----agaaacttctgaatagcactataatatgttgatcacacc 48978724  T
Q  140 agataagtctattacacccaatattatcaacatcaacaggcttcta 185  Q
    |||| ||||  |||||| |  |||||||||| ||| ||||||||||    
T  48978723 agatcagtccgttacactctgtattatcaacctcagcaggcttcta 48978678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 40 - 185
Target Start/End: Complemental strand, 48988359 - 48988218
Alignment:
Q  40 aaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacacc 139  Q
    |||||||||| ||||||  |||||   ||||| | |||||||||||||||||||  |    |||||||||||| ||||||||||   | |||||||||||    
T  48988359 aaccggctacgtccagtccccacactacgtgtgagattatccactatagtatccatc----agaaacttctgaatagcactataatatgttgatcacacc 48988264  T
Q  140 agataagtctattacacccaatattatcaacatcaacaggcttcta 185  Q
    |||| ||||  |||||| |  |||||||||| ||| ||||||||||    
T  48988263 agatcagtccgttacactctgtattatcaacctcagcaggcttcta 48988218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 95 - 194
Target Start/End: Complemental strand, 4951693 - 4951595
Alignment:
Q  95 gctaatagaaacttctgactagcactatatgttcttgatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    ||||| ||||| ||||||||||||||| | | | ||| ||||||||||| ||||| ||||| ||  |||||||||| ||||||| |||||| ||||||||    
T  4951693 gctaacagaaatttctgactagcactacaaggtattggtcacaccagatcagtctgttaca-cctgtattatcaacctcaacagccttctacaattcttt 4951595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 194
Target Start/End: Complemental strand, 23487161 - 23487043
Alignment:
Q  75 attatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacaccagataagtctattacacccaatattatcaacatca 174  Q
    ||||||||||||||||| | | |  ||||||||||| || | ||||||| | ||||||||||||||||| ||||| | || ||   |||||||||| |||    
T  23487161 attatccactatagtattcagttggtagaaacttctaaccaacactataaggtcttgatcacaccagatcagtctgtaac-ccttgtattatcaacctca 23487063  T
Q  175 acaggcttctaaaattcttt 194  Q
     |||||||||| ||||||||    
T  23487062 gcaggcttctacaattcttt 23487043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 48978569 - 48978494
Alignment:
Q  270 tttctcaacacttgtttgagagtaggatgaaaaacaaactcaaaagattatgatccaagatataatgaaagagtagaag 348  Q
    ||||||||||||||||||||| || |||  |||||||||| ||||||||||||||||| || || || |||||||||||    
T  48978569 tttctcaacacttgtttgagattatgat--aaaacaaacttaaaagattatgatccaa-atctagtgcaagagtagaag 48978494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 348
Target Start/End: Complemental strand, 48988109 - 48988034
Alignment:
Q  270 tttctcaacacttgtttgagagtaggatgaaaaacaaactcaaaagattatgatccaagatataatgaaagagtagaag 348  Q
    ||||||||||||||||||||| || |||  |||||||||| ||||||||||||||||| || || || |||||||||||    
T  48988109 tttctcaacacttgtttgagattatgat--aaaacaaacttaaaagattatgatccaa-atctagtgcaagagtagaag 48988034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 13328301 - 13328418
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| ||| |||||||||||  |||||   ||||| | ||||||||||||||||| | | |  ||||||||||| || | ||||||  | ||||    
T  13328301 gttcaccaaacccgactacttccagtccccacacttcgtgtgagattatccactatagtatacagttggtagaaacttctaaccaacactattaggtctt 13328400  T
Q  131 gatcacaccagataagtc 148  Q
    ||||||||||||| ||||    
T  13328401 gatcacaccagatcagtc 13328418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0269 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0269
Description:

Target: scaffold0269; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 40 - 185
Target Start/End: Original strand, 14846 - 14991
Alignment:
Q  40 aaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacacc 139  Q
    |||||||||| ||||||  |||||   ||||| | ||||||||||||||||||| ||||  |||||||||||| ||||||||||   | |||||||||||    
T  14846 aaccggctacgtccagtccccacactacgtgtgagattatccactatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacacc 14945  T
Q  140 agataagtctattacacccaatattatcaacatcaacaggcttcta 185  Q
    |||| ||||| |||||| |  |||||||||| ||| ||||||||||    
T  14946 agatcagtctgttacactctgtattatcaacctcagcaggcttcta 14991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 50 - 194
Target Start/End: Complemental strand, 10188 - 10044
Alignment:
Q  50 ttccagtttccacatcccgtgttaaattatccactatagta-tccggctaatagaaacttctgactagcactatatgttcttgatcacaccagataagtc 148  Q
    |||||||  ||||| ||||||| | |||||||||||||||  ||  ||||| ||||||||||||||||||||||| | ||| ||||||||||||| ||||    
T  10188 ttccagtccccacaccccgtgtgagattatccactatagttgtcttgctaacagaaacttctgactagcactataaggtctagatcacaccagatcagtc 10089  T
Q  149 tattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    | ||||| ||  |||||||||| |||| ||||||||| ||||||||    
T  10088 tgttaca-cctgtattatcaacctcaataggcttctacaattcttt 10044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 194
Target Start/End: Original strand, 30846 - 31009
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatag-tatccggctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| |||||||||||||||  ||||| | ||||| | |||||||||||||| | ||  ||||| ||||||||||||||| ||||| |   | |    
T  30846 gttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactaacactacaatattt 30945  T
Q  130 tgatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    |||||||||||||| ||||  | ||| ||  |||||||||| ||| ||||||| || ||||||||    
T  30946 tgatcacaccagatcagtcagtaaca-cctgtattatcaacctcagcaggcttatacaattcttt 31009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 3698 - 3535
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagta-tccggctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| |||||||||||||||  ||||| | ||||| | |||||||||||||||  ||  ||||| ||||||||||||||||||||| |  ||||    
T  3698 gttcaccaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttgtcttgctaacagaaacttctgactagcactacaatttct 3599  T
Q  130 tgatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    |||||||||||||| ||||| | || | |  |||||||||| ||| ||||||| || ||||||||    
T  3598 tgatcacaccagatcagtctgtaac-ctctgtattatcaacctcagcaggcttatacaattcttt 3535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 187 - 301
Target Start/End: Original strand, 42179 - 42293
Alignment:
Q  187 aattctttctcaaactattatgaaaaatagacttgagaattaaaataaaatttgtatgatgaagggtttt-tgttggatctagatttctcaacacttgtt 285  Q
    |||||||||||||||||||  || ||||||||||||| | ||||||| ||||| ||||||||| |||||| ||||||||| |  ||||||||||||| ||    
T  42179 aattctttctcaaactattccgacaaatagacttgag-actaaaatacaatttttatgatgaaaggttttgtgttggatccaattttctcaacacttatt 42277  T
Q  286 tgagagtaggatgaaa 301  Q
    ||||| || |||||||    
T  42278 tgagattatgatgaaa 42293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 24711 - 24601
Alignment:
Q  75 attatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacaccagataagtctattacacccaatattatcaacatca 174  Q
    ||||||||||||||||||| ||||  |||||||||||| ||||||||||   | ||||||||||||||| ||||  |||||| |  |||||||||| |||    
T  24711 attatccactatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccagatcagtccgttacactctgtattatcaacctca 24612  T
Q  175 acaggcttcta 185  Q
     ||||||||||    
T  24611 gcaggcttcta 24601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 47; Significance: 9e-18; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 94454 - 94572
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccg-gctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| |||||||||||||||  ||||| | ||||| | ||||||||||||||| | |  ||||| ||||||||||||||||||||| |  ||||    
T  94454 gttcactaaacccggctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaatttct 94553  T
Q  130 tgatcacaccagataagtc 148  Q
    |||||||||||||| ||||    
T  94554 tgatcacaccagatcagtc 94572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 148
Target Start/End: Original strand, 103895 - 104013
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccg-gctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| ||||||| |||||||  ||||| | ||||| | ||||||||||||||| | |  ||||| ||||||||||||||||||||| |  ||||    
T  103895 gttcaccaaacccggctaattccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaatttct 103994  T
Q  130 tgatcacaccagataagtc 148  Q
    |||||||||||||| ||||    
T  103995 tgatcacaccagatcagtc 104013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 100101 - 99991
Alignment:
Q  75 attatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacaccagataagtctattacacccaatattatcaacatca 174  Q
    |||||||| |||||||||| ||||  |||||||||||| ||||||||||   | |||||||||||| || ||||| |||||| |  |||||||||| |||    
T  100101 attatccattatagtatcctgctatcagaaacttctgaatagcactataatatgttgatcacaccaaatcagtctgttacactctgtattatcaacctca 100002  T
Q  175 acaggcttcta 185  Q
    ||| |||||||    
T  100001 acaagcttcta 99991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 194
Target Start/End: Complemental strand, 124167 - 124049
Alignment:
Q  75 attatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacaccagataagtctattacacccaatattatcaacatca 174  Q
    ||||||||||||||||| | | |  ||||||||||| || | ||||||| | ||||||||||||||||| ||||  | || | |  |||||||||| |||    
T  124167 attatccactatagtatgcagttggtagaaacttctaaccaacactataaggtcttgatcacaccagatcagtccgtaac-cactgtattatcaacctca 124069  T
Q  175 acaggcttctaaaattcttt 194  Q
     |||||||||| ||||||||    
T  124068 gcaggcttctacaattcttt 124049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 31 - 148
Target Start/End: Complemental strand, 408493 - 408375
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccg-gctaatagaaacttctgactagcactatatgttct 129  Q
    |||||| ||| ||| |||||||||||  ||||| | ||||| | ||||||||||||||| | |  ||||| ||||||||||||||||||||| |   |||    
T  408493 gttcaccaaacccgtctacttccagtccccacacctcgtgtgagattatccactatagttttcttgctaacagaaacttctgactagcactacaatatct 408394  T
Q  130 tgatcacaccagataagtc 148  Q
    |||||||||||||| ||||    
T  408393 tgatcacaccagattagtc 408375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 31 - 143
Target Start/End: Complemental strand, 257122 - 257010
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||||||||  |||||   ||||| ||||||||||||||||||| | | |  ||||||||||| || | |||||||   ||||    
T  257122 gttcaccaaatccggctacttccagtccccacacttcgtgtgaaattatccactatagtattcagttggtagaaacttctaaccaacactataaagtctt 257023  T
Q  131 gatcacaccagat 143  Q
    |||||||||||||    
T  257022 gatcacaccagat 257010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 194
Target Start/End: Complemental strand, 2273 - 2111
Alignment:
Q  31 gttcacgaaaaccggctacttccagtttccacatcccgtgttaaattatccactatagtatccggctaatagaaacttctgactagcactatatgttctt 130  Q
    |||||| ||| |||||||||||||||  |||||   ||||| | ||||||||||||||||| | | |  || |||||||| || | ||||||| | ||||    
T  2273 gttcaccaaacccggctacttccagtccccacacttcgtgtgagattatccactatagtatacagttggtataaacttctaaccaacactataaggtctt 2174  T
Q  131 gatcacaccagataagtctattacacccaatattatcaacatcaacaggcttctaaaattcttt 194  Q
    ||||||||||||| ||||   ||  |||  |||||||||| ||| |||||||||| ||||||||    
T  2173 gatcacaccagatcagtc-cgtaatccctgtattatcaacctcagcaggcttctacaattcttt 2111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 27127 - 27192
Alignment:
Q  78 atccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacaccagat 143  Q
    ||||||||||||||||  |||  |||||||||| | || |||||||||||||||||||||| ||||    
T  27127 atccactatagtatccaactatcagaaacttcttaataacactatatgttcttgatcacactagat 27192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 148
Target Start/End: Original strand, 2328 - 2401
Alignment:
Q  75 attatccactatagtatccggctaatagaaacttctgactagcactatatgttcttgatcacaccagataagtc 148  Q
    ||||||||||||||||| | | |  ||||||||||| || | ||||||| | ||||||||||||||||| ||||    
T  2328 attatccactatagtatacagttggtagaaacttctaaccaacactataaggtcttgatcacaccagatcagtc 2401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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