View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3480_low_8 (Length: 303)
Name: NF3480_low_8
Description: NF3480
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3480_low_8 |
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Alignment Details
Target: chr6 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 18 - 296
Target Start/End: Original strand, 14972480 - 14972758
Alignment:
| Q |
18 |
atctgttggttatgggatctgaaaggtggcttcaacataaacattaactaggatctaggtttcctggttttatgggatagttcaacaatagggctacggg |
117 |
Q |
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| T |
14972480 |
atctgttggttatgggatctgaaaggtggcttcaacataaactttaactaggatctaggtttcctggttttatgggatagttcaacaatagggctacggg |
14972579 |
T |
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| Q |
118 |
atcttggttctagttgatcatgttgaacctccgcctctttctatagtggttcgtttctagttttattgcttcgtcccaagagatccgaaaaccaactttt |
217 |
Q |
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| T |
14972580 |
atcttggttctagttgatcatgttgaacctccgcctctttctatagtggttggtttctagttttattgcttcgtcccaagagatccgaaaaccaactttt |
14972679 |
T |
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| Q |
218 |
gggttgagggttgtctaagcataacttttggttgcttcctaatagccttaaatttgttggccataaatggttgatgatg |
296 |
Q |
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| T |
14972680 |
gggttgagggttgtctaagcataacttttggtttcttcctaatagccttaaatttgttggccataaatggttgatgatg |
14972758 |
T |
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