View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3481_low_10 (Length: 286)

Name: NF3481_low_10
Description: NF3481
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3481_low_10
NF3481_low_10
[»] chr4 (51 HSPs)
chr4 (1-259)||(49811314-49811568)
chr4 (82-193)||(38690666-38690778)
chr4 (75-193)||(16556451-16556570)
chr4 (75-193)||(40406936-40407056)
chr4 (75-194)||(13539816-13539934)
chr4 (75-193)||(37574273-37574391)
chr4 (75-189)||(45847902-45848017)
chr4 (82-143)||(56555599-56555660)
chr4 (90-193)||(43084447-43084551)
chr4 (75-142)||(11491195-11491262)
chr4 (82-195)||(29889761-29889875)
chr4 (76-193)||(37889583-37889701)
chr4 (89-129)||(49607615-49607655)
chr4 (84-143)||(2832056-2832115)
chr4 (91-193)||(14794917-14795020)
chr4 (75-185)||(45355694-45355804)
chr4 (75-185)||(45369435-45369545)
chr4 (75-193)||(46283122-46283241)
chr4 (87-169)||(22525413-22525495)
chr4 (96-179)||(24570224-24570308)
chr4 (90-193)||(29430497-29430601)
chr4 (85-129)||(35733439-35733483)
chr4 (75-143)||(48404113-48404181)
chr4 (85-129)||(49607941-49607985)
chr4 (75-143)||(50815758-50815826)
chr4 (75-130)||(22341838-22341893)
chr4 (75-193)||(26885376-26885495)
chr4 (82-129)||(36993106-36993153)
chr4 (82-129)||(44251310-44251357)
chr4 (75-117)||(2766734-2766776)
chr4 (96-193)||(43362165-43362263)
chr4 (75-120)||(35305056-35305101)
chr4 (96-146)||(41540542-41540594)
chr4 (85-125)||(2931133-2931173)
chr4 (76-144)||(25234835-25234903)
chr4 (75-143)||(42154617-42154685)
chr4 (87-168)||(15334781-15334864)
chr4 (89-128)||(21200596-21200634)
chr4 (110-161)||(42758175-42758226)
chr4 (153-196)||(49607887-49607930)
chr4 (75-193)||(51974747-51974866)
chr4 (199-229)||(5416429-5416459)
chr4 (75-146)||(8716364-8716437)
chr4 (94-179)||(22096386-22096472)
chr4 (153-195)||(49607562-49607604)
chr4 (93-123)||(56360632-56360662)
chr4 (199-232)||(1871358-1871391)
chr4 (99-143)||(36008326-36008371)
chr4 (199-231)||(13493355-13493387)
chr4 (82-154)||(19688853-19688925)
chr4 (104-179)||(34974716-34974791)
[»] chr8 (37 HSPs)
chr8 (82-195)||(19957304-19957418)
chr8 (75-193)||(11052560-11052679)
chr8 (75-193)||(1032570-1032689)
chr8 (75-191)||(38289211-38289328)
chr8 (75-143)||(43413862-43413930)
chr8 (75-193)||(4259859-4259978)
chr8 (75-129)||(8145838-8145892)
chr8 (76-179)||(10201276-10201380)
chr8 (90-193)||(41454818-41454922)
chr8 (75-191)||(19733045-19733162)
chr8 (99-169)||(34073238-34073311)
chr8 (75-143)||(17855700-17855768)
chr8 (75-193)||(39172189-39172307)
chr8 (75-184)||(43508426-43508534)
chr8 (76-193)||(10621352-10621470)
chr8 (76-193)||(32822116-32822233)
chr8 (75-143)||(36587626-36587694)
chr8 (93-129)||(38064042-38064078)
chr8 (90-193)||(41845420-41845524)
chr8 (85-184)||(279983-280082)
chr8 (85-184)||(635770-635869)
chr8 (85-184)||(821573-821672)
chr8 (75-193)||(1360111-1360229)
chr8 (85-120)||(3956731-3956766)
chr8 (82-129)||(11690937-11690984)
chr8 (147-194)||(18080938-18080985)
chr8 (75-193)||(22652683-22652802)
chr8 (94-192)||(43456648-43456746)
chr8 (95-129)||(3728224-3728258)
chr8 (104-193)||(36103927-36104017)
chr8 (75-125)||(39104675-39104725)
chr8 (99-143)||(5184886-5184931)
chr8 (75-191)||(8349459-8349576)
chr8 (99-143)||(10199741-10199786)
chr8 (153-194)||(40444704-40444745)
chr8 (91-143)||(5904366-5904418)
chr8 (99-161)||(43874976-43875040)
[»] chr3 (54 HSPs)
chr3 (75-195)||(38414882-38415002)
chr3 (82-193)||(45431627-45431739)
chr3 (75-194)||(27394507-27394626)
chr3 (75-194)||(166787-166907)
chr3 (75-189)||(1102672-1102787)
chr3 (75-193)||(50676843-50676962)
chr3 (86-193)||(49429461-49429568)
chr3 (75-193)||(50381714-50381833)
chr3 (82-194)||(37756396-37756511)
chr3 (75-193)||(33528181-33528300)
chr3 (75-181)||(43897614-43897721)
chr3 (75-193)||(54457153-54457272)
chr3 (75-129)||(8930953-8931007)
chr3 (75-184)||(22602179-22602289)
chr3 (75-191)||(47864638-47864755)
chr3 (91-193)||(11483613-11483716)
chr3 (75-193)||(50271730-50271848)
chr3 (75-143)||(29645803-29645871)
chr3 (75-193)||(46798582-46798701)
chr3 (86-184)||(48717422-48717521)
chr3 (75-129)||(38668193-38668247)
chr3 (75-143)||(27471555-27471623)
chr3 (90-193)||(32421348-32421452)
chr3 (75-143)||(39739325-39739393)
chr3 (75-193)||(27817044-27817162)
chr3 (82-184)||(28054713-28054815)
chr3 (82-184)||(28065138-28065240)
chr3 (96-194)||(31419582-31419681)
chr3 (93-143)||(29226377-29226427)
chr3 (75-125)||(31435477-31435527)
chr3 (86-120)||(41768447-41768481)
chr3 (75-129)||(44062018-44062072)
chr3 (76-122)||(50332935-50332981)
chr3 (75-129)||(54964517-54964571)
chr3 (75-193)||(25165440-25165563)
chr3 (85-129)||(985905-985949)
chr3 (75-143)||(9320935-9321003)
chr3 (85-129)||(9738421-9738465)
chr3 (87-123)||(24651195-24651231)
chr3 (99-161)||(49639060-49639124)
chr3 (95-193)||(34225195-34225296)
chr3 (90-194)||(7239805-7239906)
chr3 (199-229)||(24647920-24647950)
chr3 (75-129)||(40415538-40415592)
chr3 (75-193)||(55426114-55426229)
chr3 (110-143)||(21249001-21249034)
chr3 (99-143)||(32508793-32508838)
chr3 (99-142)||(335029-335073)
chr3 (75-143)||(7517991-7518059)
chr3 (119-194)||(17602668-17602743)
chr3 (110-161)||(28951898-28951950)
chr3 (92-194)||(30693227-30693328)
chr3 (93-129)||(33830362-33830398)
chr3 (93-125)||(40412336-40412368)
[»] chr1 (59 HSPs)
chr1 (75-189)||(19424050-19424165)
chr1 (75-196)||(35195587-35195709)
chr1 (75-193)||(24134600-24134719)
chr1 (75-129)||(29332349-29332403)
chr1 (76-193)||(40209892-40210010)
chr1 (90-194)||(22779222-22779327)
chr1 (75-143)||(2350351-2350419)
chr1 (75-143)||(10123029-10123097)
chr1 (75-174)||(42946443-42946543)
chr1 (75-129)||(25031473-25031527)
chr1 (86-194)||(1862827-1862935)
chr1 (75-143)||(3347679-3347747)
chr1 (75-193)||(43109214-43109333)
chr1 (90-138)||(27980124-27980172)
chr1 (75-193)||(40061443-40061562)
chr1 (75-193)||(49619972-49620091)
chr1 (91-193)||(50011507-50011610)
chr1 (118-184)||(34940436-34940502)
chr1 (96-173)||(35111669-35111747)
chr1 (75-128)||(27054762-27054815)
chr1 (95-143)||(8893911-8893959)
chr1 (90-193)||(14262712-14262816)
chr1 (75-174)||(25299878-25299978)
chr1 (75-178)||(31964592-31964696)
chr1 (82-193)||(44583588-44583699)
chr1 (75-193)||(7438621-7438740)
chr1 (75-193)||(12973254-12973373)
chr1 (75-193)||(15417793-15417912)
chr1 (75-193)||(34702289-34702408)
chr1 (75-193)||(47651872-47651990)
chr1 (90-129)||(50065075-50065114)
chr1 (75-129)||(12148549-12148603)
chr1 (75-129)||(46532471-46532525)
chr1 (75-129)||(49239823-49239877)
chr1 (75-144)||(16985911-16985980)
chr1 (93-130)||(20267885-20267922)
chr1 (90-143)||(47428886-47428939)
chr1 (93-130)||(49895799-49895836)
chr1 (86-193)||(22853748-22853856)
chr1 (96-140)||(35309778-35309822)
chr1 (75-143)||(41618736-41618804)
chr1 (82-129)||(10790476-10790523)
chr1 (75-142)||(23368708-23368775)
chr1 (75-193)||(48497189-48497308)
chr1 (99-159)||(1031621-1031683)
chr1 (75-129)||(4126964-4127018)
chr1 (85-143)||(50302837-50302894)
chr1 (76-184)||(7006601-7006710)
chr1 (76-129)||(29936658-29936711)
chr1 (82-161)||(39238748-39238826)
chr1 (147-195)||(10629363-10629411)
chr1 (75-123)||(15550940-15550988)
chr1 (99-161)||(15774311-15774375)
chr1 (99-161)||(21884607-21884671)
chr1 (82-143)||(22346470-22346529)
chr1 (110-161)||(28916929-28916981)
chr1 (99-169)||(34560337-34560409)
chr1 (119-194)||(35605615-35605690)
chr1 (155-195)||(40513235-40513275)
[»] chr7 (53 HSPs)
chr7 (75-193)||(26606085-26606204)
chr7 (76-193)||(15025156-15025274)
chr7 (75-193)||(5228071-5228189)
chr7 (85-195)||(46243289-46243400)
chr7 (75-194)||(9668792-9668910)
chr7 (75-184)||(28914853-28914964)
chr7 (75-179)||(4956068-4956173)
chr7 (75-195)||(23602272-23602393)
chr7 (75-193)||(48433686-48433805)
chr7 (82-195)||(44662446-44662560)
chr7 (75-192)||(6548688-6548805)
chr7 (90-193)||(40273821-40273925)
chr7 (75-193)||(14707293-14707411)
chr7 (90-143)||(10091448-10091501)
chr7 (82-194)||(29357800-29357912)
chr7 (75-193)||(31793468-31793587)
chr7 (75-129)||(20529961-20530015)
chr7 (84-193)||(23824577-23824686)
chr7 (85-194)||(37665743-37665853)
chr7 (75-129)||(46195983-46196037)
chr7 (87-143)||(10624786-10624841)
chr7 (91-143)||(12166133-12166185)
chr7 (90-193)||(24029985-24030089)
chr7 (75-193)||(27454011-27454131)
chr7 (85-129)||(43440754-43440798)
chr7 (92-144)||(47324476-47324528)
chr7 (82-142)||(48258167-48258227)
chr7 (90-184)||(48525586-48525681)
chr7 (75-117)||(13295351-13295393)
chr7 (94-144)||(25775608-25775658)
chr7 (93-174)||(40011731-40011813)
chr7 (84-125)||(20013650-20013691)
chr7 (86-191)||(32376442-32376547)
chr7 (77-129)||(48619861-48619913)
chr7 (93-193)||(3889794-3889896)
chr7 (86-129)||(24575215-24575258)
chr7 (94-184)||(25770037-25770128)
chr7 (92-130)||(35307926-35307965)
chr7 (86-129)||(36977228-36977271)
chr7 (92-143)||(42841774-42841825)
chr7 (199-229)||(16366600-16366630)
chr7 (96-193)||(33248799-33248897)
chr7 (75-129)||(38378284-38378338)
chr7 (199-229)||(44648046-44648076)
chr7 (200-229)||(4888550-4888579)
chr7 (76-129)||(26455982-26456035)
chr7 (75-120)||(33342795-33342840)
chr7 (99-143)||(46716384-46716429)
chr7 (75-143)||(3961384-3961452)
chr7 (75-143)||(22156148-22156216)
chr7 (75-143)||(22212063-22212131)
chr7 (99-161)||(22965957-22966021)
chr7 (75-143)||(46266719-46266787)
[»] chr5 (30 HSPs)
chr5 (75-195)||(15680877-15680998)
chr5 (87-195)||(34729468-34729578)
chr5 (75-193)||(31250147-31250266)
chr5 (75-195)||(20191440-20191560)
chr5 (75-193)||(43227866-43227986)
chr5 (90-193)||(38503248-38503352)
chr5 (77-120)||(12256474-12256517)
chr5 (75-193)||(42208917-42209035)
chr5 (90-142)||(4395842-4395894)
chr5 (75-193)||(17077361-17077480)
chr5 (75-129)||(5039745-5039799)
chr5 (75-121)||(33545363-33545409)
chr5 (75-191)||(5263171-5263288)
chr5 (99-144)||(35168632-35168677)
chr5 (90-193)||(15470612-15470716)
chr5 (76-143)||(1572161-1572228)
chr5 (84-193)||(1984174-1984284)
chr5 (75-125)||(5048701-5048751)
chr5 (99-151)||(5156940-5156993)
chr5 (98-161)||(10508612-10508677)
chr5 (98-161)||(15978675-15978740)
chr5 (99-143)||(18478054-18478099)
chr5 (99-143)||(19059003-19059048)
chr5 (99-143)||(20762332-20762377)
chr5 (99-143)||(32158413-32158458)
chr5 (96-129)||(38435984-38436017)
chr5 (99-161)||(1244726-1244790)
chr5 (99-143)||(18872572-18872615)
chr5 (99-159)||(24205470-24205529)
chr5 (199-227)||(39902497-39902525)
[»] chr2 (42 HSPs)
chr2 (75-194)||(24202149-24202269)
chr2 (75-184)||(42541165-42541274)
chr2 (93-179)||(37886219-37886305)
chr2 (95-193)||(43684279-43684377)
chr2 (75-189)||(1962830-1962944)
chr2 (75-193)||(34107495-34107613)
chr2 (90-194)||(25783205-25783309)
chr2 (75-193)||(33065233-33065352)
chr2 (75-142)||(37592198-37592265)
chr2 (75-129)||(41541516-41541570)
chr2 (75-144)||(43027205-43027274)
chr2 (75-142)||(29090467-29090534)
chr2 (75-125)||(41750015-41750065)
chr2 (75-125)||(42998704-42998754)
chr2 (82-143)||(19843346-19843407)
chr2 (91-175)||(33613597-33613682)
chr2 (75-194)||(20435780-20435899)
chr2 (75-194)||(5206998-5207117)
chr2 (82-194)||(9564537-9564651)
chr2 (82-125)||(18424135-18424178)
chr2 (75-129)||(5207157-5207211)
chr2 (93-194)||(20375592-20375694)
chr2 (75-193)||(31149078-31149196)
chr2 (93-142)||(3330195-3330244)
chr2 (76-129)||(5901808-5901861)
chr2 (93-142)||(42678318-42678367)
chr2 (90-193)||(17269912-17270016)
chr2 (75-143)||(18949661-18949728)
chr2 (113-184)||(31594380-31594452)
chr2 (76-193)||(32084845-32084956)
chr2 (93-141)||(35710165-35710213)
chr2 (75-194)||(36755621-36755741)
chr2 (82-121)||(10745487-10745526)
chr2 (75-129)||(17543066-17543120)
chr2 (117-179)||(24374216-24374277)
chr2 (199-229)||(32009938-32009968)
chr2 (199-232)||(30857639-30857672)
chr2 (93-189)||(33482636-33482733)
chr2 (99-161)||(8234791-8234855)
chr2 (75-195)||(10699782-10699902)
chr2 (82-142)||(17376437-17376497)
chr2 (99-161)||(30474194-30474258)
[»] chr6 (33 HSPs)
chr6 (76-189)||(7164699-7164812)
chr6 (75-190)||(5641666-5641781)
chr6 (75-193)||(6228236-6228355)
chr6 (75-193)||(17216958-17217077)
chr6 (75-193)||(20415538-20415657)
chr6 (75-179)||(35065466-35065570)
chr6 (88-193)||(8330480-8330586)
chr6 (75-143)||(5757847-5757915)
chr6 (75-143)||(18903343-18903411)
chr6 (75-144)||(31703704-31703773)
chr6 (88-179)||(9455854-9455945)
chr6 (82-196)||(3338290-3338404)
chr6 (82-179)||(7954905-7955003)
chr6 (92-179)||(32470698-32470787)
chr6 (90-126)||(1183943-1183979)
chr6 (91-143)||(11611420-11611472)
chr6 (75-167)||(9763461-9763553)
chr6 (75-179)||(29321952-29322057)
chr6 (75-143)||(4854282-4854350)
chr6 (75-130)||(6371582-6371637)
chr6 (91-129)||(1194696-1194733)
chr6 (96-194)||(20568252-20568352)
chr6 (75-129)||(34884133-34884187)
chr6 (75-120)||(3200059-3200104)
chr6 (93-126)||(3974509-3974542)
chr6 (99-143)||(6270608-6270653)
chr6 (75-128)||(11552937-11552990)
chr6 (85-193)||(24794881-24794990)
chr6 (92-128)||(5948937-5948973)
chr6 (119-194)||(7545332-7545407)
chr6 (133-165)||(16719326-16719358)
chr6 (97-129)||(32344704-32344736)
chr6 (99-142)||(35190815-35190859)
[»] scaffold0001 (1 HSPs)
scaffold0001 (75-193)||(419712-419831)
[»] scaffold0054 (1 HSPs)
scaffold0054 (85-190)||(22462-22568)
[»] scaffold0005 (1 HSPs)
scaffold0005 (91-193)||(44711-44814)
[»] scaffold0126 (1 HSPs)
scaffold0126 (110-161)||(22861-22912)
[»] scaffold0087 (1 HSPs)
scaffold0087 (75-142)||(44331-44398)
[»] scaffold0108 (1 HSPs)
scaffold0108 (83-123)||(18330-18370)


Alignment Details
Target: chr4 (Bit Score: 172; Significance: 2e-92; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 1 - 259
Target Start/End: Original strand, 49811314 - 49811568
Alignment:
Q  1 cttttcgatgccatgagcaactccctggtggtcctcaaaaatgtttctcacatacactctannnnnnnnnnnnngtcaagcagcctagcggctagagaaa 100  Q
    ||||||||| |||||||||||||| |||||||||| |||||||| ||||||||||||| |              |||||| |||||||||||||||||||    
T  49811314 cttttcgataccatgagcaactccttggtggtcctaaaaaatgtctctcacatacactat----ttttttttttgtcaagtagcctagcggctagagaaa 49811409  T
Q  101 ttcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattccttaccaagtgagataagctcacatacac 200  Q
    |||| |||||||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49811410 ttcatcttaaaggtgaataagtggggtattatgggttcgaaccctgcccctacatataatatgcattattccttaccaagtgagataagctcacatacac 49811509  T
Q  201 tccatttattttgtcaaatggagaggatcctatcccccatataaatatatatgatgctg 259  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49811510 tccatttattttgtcaaatggagaggatcctatcccccatataaatatatatgatgctg 49811568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 82 - 193
Target Start/End: Complemental strand, 38690778 - 38690666
Alignment:
Q  82 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaag 180  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||   |||||||||||  | ||||| ||||||||||||||||| ||||||||||    
T  38690778 agcctagcggctagagaaattcaccttaaaggagaataagtggggtgtccggggttcgaaccccgacccctgcatataatatgcattatcccttaccaag 38690679  T
Q  181 tgagataagctca 193  Q
    |||| ||||||||    
T  38690678 tgagctaagctca 38690666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 16556570 - 16556451
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 173  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||  |||||||||||  | ||||| || ||| | |||||||| |||    
T  16556570 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgttcggggttcgaaccccgacccctgcacatattgtgcattatccct 16556471  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  16556470 taccaaatgagctaagctca 16556451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 40406936 - 40407056
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa--ccttgcccctacatataatatgcattattcc 172  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||   |||||||||  ||  |||||| || ||| | |||||||| ||    
T  40406936 gtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaacccccggcccctgcacatattgtgcattatccc 40407035  T
Q  173 ttaccaagtgagataagctca 193  Q
    ||||||| |||| ||||||||    
T  40407036 ttaccaaatgagctaagctca 40407056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 194
Target Start/End: Original strand, 13539816 - 13539934
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacctt-gcccctacatataatatgcattattcct 173  Q
    |||||| ||||||||||| ||||||||||||||||| ||||||||| || ||||||  ||||||||||| | | |||| |||| |||||||||||| |||    
T  13539816 gtcaagtagcctagcggccagagaaattcaccttaa-ggtgaataaatgaggtgtttggggttcgaaccctagtccctgcata-aatatgcattatccct 13539913  T
Q  174 taccaagtgagataagctcac 194  Q
    ||||||||||| |||||||||    
T  13539914 taccaagtgagctaagctcac 13539934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 37574391 - 37574273
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||||||    ||||| ||| ||  |||||| |||| || ||||||||| |||    
T  37574391 gtcaagtagcctagtggctagagaaattcaccttaaaggtgaataagtggggtgcccggggtttgaaccccggcccctgcatacaa-atgcattatccct 37574293  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  37574292 taccaaatgagctaagctca 37574273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 189
Target Start/End: Original strand, 45847902 - 45848017
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 173  Q
    |||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||   |||||||||||  |  |||| || ||| |||||||||| |||    
T  45847902 gtcaagcagcctaggggctaaagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccgatccctgcacatattatgcattatccct 45848001  T
Q  174 taccaagtgagataag 189  Q
    || ||| |||||||||    
T  45848002 tatcaaatgagataag 45848017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 82 - 143
Target Start/End: Complemental strand, 56555660 - 56555599
Alignment:
Q  82 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||   ||||||||||    
T  56555660 agcctaacggctagagaaattcaccttaaaggtgaataagtggggtgttcgaggttcgaacc 56555599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 193
Target Start/End: Complemental strand, 43084551 - 43084447
Alignment:
Q  90 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtgagataa 188  Q
    ||||||||||||||||||||||| ||||||||||||||    ||| ||||||||  | |||||| ||||| | |||||||||||||||||| |||| |||    
T  43084551 ggctagagaaattcaccttaaagatgaataagtggggtaaccaggattcgaaccccgacccctatatatattgtgcattattccttaccaaatgagttaa 43084452  T
Q  189 gctca 193  Q
    |||||    
T  43084451 gctca 43084447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 142
Target Start/End: Original strand, 11491195 - 11491262
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac 142  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||   ||||||||||    
T  11491195 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaac 11491262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 195
Target Start/End: Original strand, 29889761 - 29889875
Alignment:
Q  82 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaag 180  Q
    |||||||||||||||||||||||||||||| |||||||| |||||  |     ||||||| ||  |||||| ||||||||||||||||| ||||||  ||    
T  29889761 agcctagcggctagagaaattcaccttaaatgtgaataaatggggcatccgaagttcgaaccccggcccctgcatataatatgcattatcccttacatag 29889860  T
Q  181 tgagataagctcaca 195  Q
    |||| ||||||||||    
T  29889861 tgagctaagctcaca 29889875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 193
Target Start/End: Original strand, 37889583 - 37889701
Alignment:
Q  76 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcctt 174  Q
    ||||| ||||||| |||||||||||||||||||||| ||||||||||| |||||   |||||||||||  | ||||| |||||||||| |||| | | |     
T  37889583 tcaagtagcctagtggctagagaaattcaccttaaaagtgaataagtgaggtgtccggggttcgaaccccgacccctgcatataatatacattgtcctta 37889682  T
Q  175 accaagtgagataagctca 193  Q
    || ||||||| ||||||||    
T  37889683 acgaagtgagctaagctca 37889701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 129
Target Start/End: Complemental strand, 49607655 - 49607615
Alignment:
Q  89 cggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  49607655 cggctagagaaattcaccttaaaggtgaataagtggggtgt 49607615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 143
Target Start/End: Original strand, 2832056 - 2832115
Alignment:
Q  84 cctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    ||||| |||||||| |||||||||||||| |||||||||||||||||  |||||||||||    
T  2832056 cctagtggctagaggaattcaccttaaagatgaataagtggggtgtttggggttcgaacc 2832115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 193
Target Start/End: Complemental strand, 14795020 - 14794917
Alignment:
Q  91 gctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattccttaccaagtgagataag 189  Q
    |||||||| ||||||||||||||| ||||||| ||||||| ||||||||||| |   |||| || || | |||||||||||||||||||| |||  ||||    
T  14795020 gctagagatattcaccttaaaggtaaataagtagggtgttcagggttcgaactccaacccccacttaaattatgcattattccttaccaaatgaactaag 14794921  T
Q  190 ctca 193  Q
    ||||    
T  14794920 ctca 14794917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 185
Target Start/End: Original strand, 45355694 - 45355804
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 173  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||| ||||||   |||||||||||  | |||||||| ||| | |||||||| |||    
T  45355694 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagt-gggtgtccggggttcgaaccccgacccctacacatattgtgcattatccct 45355792  T
Q  174 taccaagtgaga 185  Q
    ||| || |||||    
T  45355793 tactaaatgaga 45355804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 185
Target Start/End: Original strand, 45369435 - 45369545
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 173  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||| ||||||   |||||||||||  | |||||||| ||| | |||||||| |||    
T  45369435 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagt-gggtgtccggggttcgaaccccgacccctacacatattgtgcattatccct 45369533  T
Q  174 taccaagtgaga 185  Q
    ||| || |||||    
T  45369534 tactaaatgaga 45369545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 46283241 - 46283122
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| || |||| | ||||||||||||||||||||| ||||||||||||||||   ||||||||| ||  ||| || || ||| | |||||||| |||    
T  46283241 gtcaagtagtctagtgactagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggccgctgcacatattgtgcattatccct 46283142  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  46283141 taccaaatgaggtaagctca 46283122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 87 - 169
Target Start/End: Complemental strand, 22525495 - 22525413
Alignment:
Q  87 agcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattat 169  Q
    ||||| |||||||||||| ||||||||||||||||||||||||   || ||||||||  ||  || |||||||||||||||||    
T  22525495 agcggttagagaaattcatcttaaaggtgaataagtggggtgtccgggattcgaacccggcttctgcatataatatgcattat 22525413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 96 - 179
Target Start/End: Complemental strand, 24570308 - 24570224
Alignment:
Q  96 agaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaa 179  Q
    ||||||||||||||||| ||||||||| |||||||  |||||||||||    |||||||||||| | |||||||| |||||||||    
T  24570308 agaaattcaccttaaagttgaataagtagggtgttcggggttcgaaccccaacccctacatatattgtgcattatcccttaccaa 24570224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 90 - 193
Target Start/End: Complemental strand, 29430601 - 29430497
Alignment:
Q  90 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtgagataa 188  Q
    ||||||| ||||||||||||||| ||||||||| ||||||   |||||||||||  |  | || ||||||||||||||| | ||||||||||| || |||    
T  29430601 ggctagataaattcaccttaaagatgaataagtagggtgtccggggttcgaaccccgatcactgcatataatatgcattgtcccttaccaagtaagctaa 29430502  T
Q  189 gctca 193  Q
    |||||    
T  29430501 gctca 29430497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 35733483 - 35733439
Alignment:
Q  85 ctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||    
T  35733483 ctagcggctaaagaaactcaccttaaaggtgaataagtggggtgt 35733439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 48404113 - 48404181
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||| ||||||| ||||| ||||||||||||||||| |||||||||| |||||   |||||||||||    
T  48404113 gtcaagtagcctagtggctaaagaaattcaccttaaagatgaataagtgaggtgtccggggttcgaacc 48404181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 49607985 - 49607941
Alignment:
Q  85 ctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||    
T  49607985 ctagtggctagagaaattcaccttaaaggtaaataagtggggtgt 49607941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 50815826 - 50815758
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||| ||||||| ||||||||||||||||||| ||| |||||| |||||||||   |||||||||||    
T  50815826 gtcaagtagcctagtggctagagaaattcacctttaagatgaatatgtggggtgtccggggttcgaacc 50815758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 130
Target Start/End: Original strand, 22341838 - 22341893
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtt 130  Q
    |||||| |||||||||| |||||||||||||||| ||| |||| ||||||||||||    
T  22341838 gtcaagtagcctagcggttagagaaattcacctttaagatgaacaagtggggtgtt 22341893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 26885376 - 26885495
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| ||||||| |||||||||||| |||||||||| | ||||||||| ||||   ||||||||| ||  |||||  |||||||| |||||||| ||     
T  26885376 gtcaagtagcctagtggctagagaaatccaccttaaagataaataagtggagtgtccggggttcgaaccccggccccagcatataatgtgcattatcccc 26885475  T
Q  174 taccaagtgagataagctca 193  Q
    | |||| |||| ||||||||    
T  26885476 tgccaaatgagctaagctca 26885495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 129
Target Start/End: Complemental strand, 36993153 - 36993106
Alignment:
Q  82 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    ||||||| ||||||||||||||||||||||| ||||||| ||||||||    
T  36993153 agcctagtggctagagaaattcaccttaaagatgaataattggggtgt 36993106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 129
Target Start/End: Original strand, 44251310 - 44251357
Alignment:
Q  82 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    ||||||||||||||| ||||||||||||||| ||||||| ||||||||    
T  44251310 agcctagcggctagaaaaattcaccttaaagatgaataaatggggtgt 44251357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 2766734 - 2766776
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaa 117  Q
    |||||| |||||||||||| |||||||||||||||||||||||    
T  2766734 gtcaagtagcctagcggctggagaaattcaccttaaaggtgaa 2766776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 193
Target Start/End: Original strand, 43362165 - 43362263
Alignment:
Q  96 agaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtgagataagctca 193  Q
    ||||||||||||||||| ||||||||||||||||   |||||||||||  | |||||  ||||| | |||||||| ||||| ||| |||| ||||||||    
T  43362165 agaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccgacccctgaatatattgtgcattatcccttagcaaatgagctaagctca 43362263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 35305101 - 35305056
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataa 120  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||||    
T  35305101 gtcaagtagcctagcggctagagaaaatcaccttaaaagtgaataa 35305056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 146
Target Start/End: Original strand, 41540542 - 41540594
Alignment:
Q  96 agaaattcacct--taaaggtgaataagtggggtgttaagggttcgaaccttg 146  Q
    ||||||||||||  |||| |||||||||||||||||| |||||||||||||||    
T  41540542 agaaattcacctcttaaacgtgaataagtggggtgttcagggttcgaaccttg 41540594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 2931173 - 2931133
Alignment:
Q  85 ctagcggctagagaaattcaccttaaaggtgaataagtggg 125  Q
    |||| ||||||||||||||||||||||| ||||||||||||    
T  2931173 ctagtggctagagaaattcaccttaaagatgaataagtggg 2931133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 144
Target Start/End: Original strand, 25234835 - 25234903
Alignment:
Q  76 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct 144  Q
    ||||| || |||| || |||||||||||||||||||| ||||||| ||||||||   ||||||||||||    
T  25234835 tcaagtagtctagtggttagagaaattcaccttaaagatgaataactggggtgtctggggttcgaacct 25234903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 42154685 - 42154617
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||| |||| |||||||||||||||||||||||||| ||| ||||||  ||||   |||||||||||    
T  42154685 gtcaagtagcccagcggctagagaaattcaccttaaagatgattaagtgaagtgtccggggttcgaacc 42154617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 87 - 168
Target Start/End: Original strand, 15334781 - 15334864
Alignment:
Q  87 agcggctagagaaattcaccttaaaggtgaat-aagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcatta 168  Q
    |||||||||||||||||||| ||||||||||| || ||||||||   |||||| || ||| |||||| |||||| |||||||||    
T  15334781 agcggctagagaaattcaccataaaggtgaataaaatggggtgtccggggttcaaaccctggcccctgcatatattatgcatta 15334864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 128
Target Start/End: Complemental strand, 21200634 - 21200596
Alignment:
Q  89 cggctagagaaattcaccttaaaggtgaataagtggggtg 128  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  21200634 cggctagagaaattcaccttaaa-gtgaataagtggggtg 21200596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 161
Target Start/End: Original strand, 42758175 - 42758226
Alignment:
Q  110 aaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataata 161  Q
    ||||||||||||||||||||  ||||||||||||  |||||| |||||||||    
T  42758175 aaggtgaataagtggggtgtccagggttcgaacccggcccctgcatataata 42758226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 196
Target Start/End: Complemental strand, 49607930 - 49607887
Alignment:
Q  153 catataatatgcattattccttaccaagtgagataagctcacat 196  Q
    ||||||||||||||||| ||||||||||| || |||||||||||    
T  49607930 catataatatgcattatcccttaccaagtaagctaagctcacat 49607887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 51974866 - 51974747
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| ||||||| ||||||| ||||||||||||||| | |||||||||| |||    |||||||| ||   ||||| || ||| | |||||||| |||    
T  51974866 gtcaagtagcctagtggctagataaattcaccttaaagataaataagtgggatgtccgaggttcgaatcccgacccctgcacatattgtgcattatccct 51974767  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  51974766 taccaaatgagctaagctca 51974747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 229
Target Start/End: Complemental strand, 5416459 - 5416429
Alignment:
Q  199 actccatttattttgtcaaatggagaggatc 229  Q
    |||||||||||||||||||||||||||||||    
T  5416459 actccatttattttgtcaaatggagaggatc 5416429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 146
Target Start/End: Original strand, 8716364 - 8716437
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcacctt--aaaggtgaataagtggggtgttaagggttcgaaccttg 146  Q
    |||| |||||||||  |||||||||||||| |||  |||| | ||||||||||||||  |||||||||||||||    
T  8716364 gtcaggcagcctagtagctagagaaattcatcttttaaagataaataagtggggtgtcgagggttcgaaccttg 8716437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 179
Target Start/End: Original strand, 22096386 - 22096472
Alignment:
Q  94 agagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataatatgcattattccttaccaa 179  Q
    ||||||||||||||||||  ||||||||||||||||   | ||||||||||  |||||| || ||| | |||||||| |||||||||    
T  22096386 agagaaattcaccttaaaaatgaataagtggggtgtccggagttcgaacctcggcccctgcacatattgtgcattatcccttaccaa 22096472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 195
Target Start/End: Complemental strand, 49607604 - 49607562
Alignment:
Q  153 catataatatgcattattccttaccaagtgagataagctcaca 195  Q
    ||||||||||||||||| ||||||||||| || ||||||||||    
T  49607604 catataatatgcattatcccttaccaagtaagctaagctcaca 49607562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 123
Target Start/End: Complemental strand, 56360662 - 56360632
Alignment:
Q  93 tagagaaattcaccttaaaggtgaataagtg 123  Q
    |||||||||||||||||||||||||||||||    
T  56360662 tagagaaattcaccttaaaggtgaataagtg 56360632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 232
Target Start/End: Original strand, 1871358 - 1871391
Alignment:
Q  199 actccatttattttgtcaaatggagaggatccta 232  Q
    ||||||||||||||||||||| ||||||||||||    
T  1871358 actccatttattttgtcaaattgagaggatccta 1871391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 36008371 - 36008326
Alignment:
Q  99 aattcacctta-aaggtgaataagtggggtgttaagggttcgaacc 143  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||    
T  36008371 aattcaccttataaggtgaataagtggggtgttcggggttcgaacc 36008326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 231
Target Start/End: Original strand, 13493355 - 13493387
Alignment:
Q  199 actccatttattttgtcaaatggagaggatcct 231  Q
    ||||||||||||||||||||| |||||||||||    
T  13493355 actccatttattttgtcaaatagagaggatcct 13493387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 154
Target Start/End: Original strand, 19688853 - 19688925
Alignment:
Q  82 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctaca 154  Q
    ||||||| ||||||||||||||||||||||| | || |||||  ||||   |||||||||||  |||||||||    
T  19688853 agcctagtggctagagaaattcaccttaaagataaagaagtgaagtgtctggggttcgaacccggcccctaca 19688925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 104 - 179
Target Start/End: Complemental strand, 34974791 - 34974716
Alignment:
Q  104 accttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaa 179  Q
    |||||||||| |||||||||||||||   ||||||||| ||  ||||||||||| || ||||||||| |||||||||    
T  34974791 accttaaaggagaataagtggggtgtccggggttcgaaccccagcccctacatacaa-atgcattatcccttaccaa 34974716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 82 - 195
Target Start/End: Original strand, 19957304 - 19957418
Alignment:
Q  82 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaag 180  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||   |||||||||||| | ||||| ||||||||||||||||| ||||||||||    
T  19957304 agcctagctgctagagaaattcaccttaaaggtgaataagtggggtgtccggggttcgaacctcgtcccctgcatataatatgcattatcccttaccaag 19957403  T
Q  181 tgagataagctcaca 195  Q
    |||| |||| |||||    
T  19957404 tgagctaagttcaca 19957418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 11052560 - 11052679
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacctt-gcccctacatataatatgcattattcct 173  Q
    |||||| | ||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||  ||||| |||||| || |  || |||||||| |||    
T  11052560 gtcaagtaacctagtggctagagaaattcaccttaaagatgaataagtggggtgtttagggttcacaccttggcccctgcacaatatgtgcattatccct 11052659  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  11052660 taccaaatgagttaagctca 11052679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 1032689 - 1032570
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    ||||||||| | || ||||||||||||||||||||||| ||||||||||||||||   ||||||||| ||  |||||| || ||| | |||||||| |||    
T  1032689 gtcaagcagtccagtggctagagaaattcaccttaaagatgaataagtggggtgtctggggttcgaaccccagcccctgcacatattgtgcattatccct 1032590  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  1032589 taccaaatgagctaagctca 1032570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 38289211 - 38289328
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 173  Q
    |||||| ||| ||| ||||||||||||||||||||||| |||||||||||||||||   ||||||||||  | ||||| || ||| | |||||||| |||    
T  38289211 gtcaagtagcttagtggctagagaaattcaccttaaagatgaataagtggggtgtttgaggttcgaaccccgacccctgcacatattgtgcattatccct 38289310  T
Q  174 taccaagtgagataagct 191  Q
    |||||| |||| ||||||    
T  38289311 taccaaatgagctaagct 38289328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 43413862 - 43413930
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||  || ||||||||    
T  43413862 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtttgggattcgaacc 43413930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 4259978 - 4259859
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||||||| ||   ||||| ||| ||  |||||| || ||| | |||||||| |||    
T  4259978 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggagtccggggttggaaccccggcccctgcacatattgtgcattatccct 4259879  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  4259878 taccaaatgagttaagctca 4259859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 8145892 - 8145838
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||||| ||| |||||| |||||||||||||||||||||||||||||||||||||    
T  8145892 gtcaagtagcgtagcggttagagaaattcaccttaaaggtgaataagtggggtgt 8145838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 10201380 - 10201276
Alignment:
Q  76 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcctt 174  Q
    ||||| ||| || ||||||||||||||||| |||||||||||||| || |||||   |||||||||||  | |||||||||||| ||||||||||  |||    
T  10201380 tcaagtagcttaacggctagagaaattcactttaaaggtgaataaatgaggtgtccggggttcgaaccccgacccctacatatattatgcattatctctt 10201281  T
Q  175 accaa 179  Q
    |||||    
T  10201280 accaa 10201276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 193
Target Start/End: Original strand, 41454818 - 41454922
Alignment:
Q  90 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtgagataa 188  Q
    |||||||||||||||| |||||| ||||||||||||||||   ||||||||| ||  |||||| || ||| | |||||||| ||||||||| |||| |||    
T  41454818 ggctagagaaattcacattaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaa 41454917  T
Q  189 gctca 193  Q
    |||||    
T  41454918 gctca 41454922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 19733045 - 19733162
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 173  Q
    |||||| ||| ||| || |||||||||||||||||||| ||||||| |  ||||||  || ||||||||  | ||||| |||||| |||||||||| |||    
T  19733045 gtcaagtagcttagtggttagagaaattcaccttaaagatgaataatttaggtgttcgggattcgaaccccgacccctgcatatattatgcattatccct 19733144  T
Q  174 taccaagtgagataagct 191  Q
    |||||| |||| ||||||    
T  19733145 taccaaatgagctaagct 19733162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 34073238 - 34073311
Alignment:
Q  99 aattcacctta-aaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataat-atgcattat 169  Q
    ||||||||||| ||||||||||||||||||||   |||||||||||||| |||||||||||||| |||||||||    
T  34073238 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccttgacccctacatataataatgcattat 34073311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 17855768 - 17855700
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||| | ||||||||||||| |||||||| ||||| |||||||||||||||||   |||||||||||    
T  17855768 gtcaagtaacctagcggctagaaaaattcactttaaatgtgaataagtggggtgtccggggttcgaacc 17855700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 39172189 - 39172307
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataatatgcattattcct 173  Q
    |||||| ||||||| ||||| |||||||||| |||||||||||||| ||||||||   || ||||||| |  ||| ||||||| || ||||||||| | |    
T  39172189 gtcaagtagcctaggggctaaagaaattcactttaaaggtgaataaatggggtgtccgggattcgaacttcggcctctacatacaa-atgcattatcctt 39172287  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  39172288 taccaaatgagttaagctca 39172307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 184
Target Start/End: Original strand, 43508426 - 43508534
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||||| ||||| |||||||  |||||||||| ||||||||||||||||||||   |||||| || ||  ||||||||||||| |||||||| | |||    
T  43508426 gtcaagcaacctagtggctaga--aattcacctttaaggtgaataagtggggtgtccggggttcaaaccccggcccctacatatattatgcattgtccct 43508523  T
Q  174 taccaagtgag 184  Q
    || ||| ||||    
T  43508524 tatcaactgag 43508534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 193
Target Start/End: Original strand, 10621352 - 10621470
Alignment:
Q  76 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcctt 174  Q
    ||||| |||||||||||   |||||||||| ||||||||||| || ||||||||   |||||| |||| || ||||| |||| |  ||||||||| ||||    
T  10621352 tcaagtagcctagcggcggaagaaattcacattaaaggtgaaaaaatggggtgtccggggttcaaaccctgacccctgcatacataatgcattatccctt 10621451  T
Q  175 accaagtgagataagctca 193  Q
    | |||||||| ||||||||    
T  10621452 atcaagtgagctaagctca 10621470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 193
Target Start/End: Complemental strand, 32822233 - 32822116
Alignment:
Q  76 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattcctt 174  Q
    ||||| ||| |||| || |||||||||||||||||| |||||| |||||| |||   |||||||||| |  ||||||| ||| || ||||||||| ||||    
T  32822233 tcaagtagcatagctgccagagaaattcaccttaaaagtgaatgagtgggatgtctggggttcgaactcccgcccctatatacaa-atgcattatccctt 32822135  T
Q  175 accaagtgagataagctca 193  Q
    ||||| |||| ||||||||    
T  32822134 accaaatgagttaagctca 32822116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 36587626 - 36587694
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||| ||||||| |||| |||||||||| ||||||| | |||||||||||||||  ||||| |||||    
T  36587626 gtcaagtagcctagtggctcgagaaattcatcttaaagataaataagtggggtgttcggggttggaacc 36587694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 38064078 - 38064042
Alignment:
Q  93 tagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||||||||||||||||||| ||||||||||||||||    
T  38064078 tagagaaattcaccttaaagatgaataagtggggtgt 38064042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 193
Target Start/End: Original strand, 41845420 - 41845524
Alignment:
Q  90 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtgagataa 188  Q
    ||||| ||||||||||||||||| ||||||| | |||||||  |||||||||||  |  |||| || ||| | |||||||| ||||||||| |||| |||    
T  41845420 ggctaaagaaattcaccttaaagatgaataaatagggtgttcggggttcgaaccccgatccctgcacatattgtgcattatcccttaccaaatgagctaa 41845519  T
Q  189 gctca 193  Q
    |||||    
T  41845520 gctca 41845524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 184
Target Start/End: Original strand, 279983 - 280082
Alignment:
Q  85 ctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattccttaccaagtgag 184  Q
    |||||| ||||||||||||||||||||  ||||||| | ||||||   ||||||||||| | ||||| || ||| | | |||||| ||||||||| ||||    
T  279983 ctagcgactagagaaattcaccttaaaaatgaataaattgggtgtccggggttcgaaccctacccctgcacatattgtacattatcccttaccaaatgag 280082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 184
Target Start/End: Complemental strand, 635869 - 635770
Alignment:
Q  85 ctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattccttaccaagtgag 184  Q
    |||||| ||||||||||||||||||||  ||||||| | ||||||   ||||||||||| | ||||| || ||| | | |||||| ||||||||| ||||    
T  635869 ctagcgactagagaaattcaccttaaaaatgaataaattgggtgtccggggttcgaaccctacccctgcacatattgtacattatcccttaccaaatgag 635770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 184
Target Start/End: Complemental strand, 821672 - 821573
Alignment:
Q  85 ctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattccttaccaagtgag 184  Q
    |||||| ||||||||||||||||||||  ||||||| | ||||||   ||||||||||| | ||||| || ||| | | |||||| ||||||||| ||||    
T  821672 ctagcgactagagaaattcaccttaaaaatgaataaattgggtgtccggggttcgaaccctacccctgcacatattgtacattatcccttaccaaatgag 821573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 1360111 - 1360229
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| ||||||| || ||||||||||||| |||||  ||||||||||||||||   ||||||||| ||  ||||||||| ||| | |||||||| | |    
T  1360111 gtcaagtagcctagtggttagagaaattcactttaaa-atgaataagtggggtgtccggggttcgaaccccagcccctacacatattgtgcattatcctt 1360209  T
Q  174 taccaagtgagataagctca 193  Q
    | |||| |||| ||||||||    
T  1360210 tgccaaatgagctaagctca 1360229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 120
Target Start/End: Original strand, 3956731 - 3956766
Alignment:
Q  85 ctagcggctagagaaattcaccttaaaggtgaataa 120  Q
    |||| |||||||||||||||||||||||||||||||    
T  3956731 ctagtggctagagaaattcaccttaaaggtgaataa 3956766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 129
Target Start/End: Original strand, 11690937 - 11690984
Alignment:
Q  82 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||||||  |||| ||||||||||||||||||||||||| ||||||||    
T  11690937 agcctagtagctaaagaaattcaccttaaaggtgaataaatggggtgt 11690984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 147 - 194
Target Start/End: Complemental strand, 18080985 - 18080938
Alignment:
Q  147 cccctacatataatatgcattattccttaccaagtgagataagctcac 194  Q
    ||||| ||||||||||||||||| |||||||||||||| |||| ||||    
T  18080985 cccctgcatataatatgcattatcccttaccaagtgagttaagatcac 18080938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 22652802 - 22652683
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattcct 173  Q
    |||||| ||| ||| ||||||||||||||||||| ||  ||||||| ||||||||   |||||||||| |  |||||| || | | |||||||||| |||    
T  22652802 gtcaagtagcttagtggctagagaaattcacctttaacatgaataattggggtgtccggggttcgaacaccggcccctgcacaaattatgcattatccct 22652703  T
Q  174 taccaagtgagataagctca 193  Q
    || ||| |||| ||||||||    
T  22652702 tatcaaatgagctaagctca 22652683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 192
Target Start/End: Original strand, 43456648 - 43456746
Alignment:
Q  94 agagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtgagataagctc 192  Q
    ||||||| ||||||||||  ||||||||||||||||   |||||||||||  | ||| |||||||| | |||||||| ||||||||| |||| |||||||    
T  43456648 agagaaaatcaccttaaaa-tgaataagtggggtgtccggggttcgaaccccgacccttacatatattgtgcattatcccttaccaaatgagctaagctc 43456746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 129
Target Start/End: Original strand, 3728224 - 3728258
Alignment:
Q  95 gagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    ||||||||||||||||||||||||||||| |||||    
T  3728224 gagaaattcaccttaaaggtgaataagtgaggtgt 3728258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 193
Target Start/End: Original strand, 36103927 - 36104017
Alignment:
Q  104 accttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtgagataagctca 193  Q
    ||||||||| |||||||||||||||||  ||||||||| ||  |||||| || ||| | |||||||| | ||||||| |||| ||||||||    
T  36103927 accttaaagatgaataagtggggtgtttggggttcgaaccccggcccctgcacatattgtgcattatcctttaccaaatgagttaagctca 36104017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 39104725 - 39104675
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggg 125  Q
    |||||| || |||| |||||||||||| |||||||||| ||||||||||||    
T  39104725 gtcaagtagtctagtggctagagaaatccaccttaaagatgaataagtggg 39104675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 5184886 - 5184931
Alignment:
Q  99 aattcacctta-aaggtgaataagtggggtgttaagggttcgaacc 143  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||||    
T  5184886 aattcaccttataaggtgaataagtggggtgtccagggttcgaacc 5184931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 191
Target Start/End: Original strand, 8349459 - 8349576
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattcct 173  Q
    |||||| || |||| || |||| ||||||| ||||||| |||||||||||||||||  | |||||||| |  |||||| |||||| | || |||||  ||    
T  8349459 gtcaagtagtctagtggttagataaattcatcttaaagatgaataagtggggtgttcggagttcgaactccggcccctgcatatattctgtattatcact 8349558  T
Q  174 taccaagtgagataagct 191  Q
    |||||| |||| ||||||    
T  8349559 taccaaatgagctaagct 8349576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 10199741 - 10199786
Alignment:
Q  99 aattcacctta-aaggtgaataagtggggtgttaagggttcgaacc 143  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||    
T  10199741 aattcaccttataaggtgaataagtggggtgtttggggttcgaacc 10199786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 194
Target Start/End: Complemental strand, 40444745 - 40444704
Alignment:
Q  153 catataatatgcattattccttaccaagtgagataagctcac 194  Q
    |||||| |||||||||| |||||||||||||| |||||||||    
T  40444745 catatattatgcattatcccttaccaagtgagctaagctcac 40444704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 5904366 - 5904418
Alignment:
Q  91 gctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||||||||||| ||||||| |||||||||||| |||   |||||||||||    
T  5904366 gctagagaaattcatcttaaagatgaataagtgggatgtccggggttcgaacc 5904418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 43874976 - 43875040
Alignment:
Q  99 aattcacctta-aaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataata 161  Q
    ||||||||||| ||||||||||||||||||||   | ||||||||||  ||||||||||||||||    
T  43874976 aattcaccttataaggtgaataagtggggtgtctggtgttcgaacctcagcccctacatataata 43875040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 75 - 195
Target Start/End: Complemental strand, 38415002 - 38414882
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 173  Q
    |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| || |||| |||| || ||||| ||||||||||||||||| |||    
T  38415002 gtcaagtagcctagcggccagagaaattcaccttaaaggtgaataagtggggtgttcagagttcaaaccctgacccctgcatataatatgcattatccct 38414903  T
Q  174 taccaagtgagataagctcaca 195  Q
    ||||||||| | ||||||||||    
T  38414902 taccaagtg-gctaagctcaca 38414882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 82 - 193
Target Start/End: Complemental strand, 45431739 - 45431627
Alignment:
Q  82 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaag 180  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||   ||||||||||| || ||||| |||| |||| ||||||| ||||||||||    
T  45431739 agcctagcggctagggaaattcaccttaaaggtgaataagtggggtgtccggggttcgaaccctgacccctgcataaaatacgcattatcccttaccaag 45431640  T
Q  181 tgagataagctca 193  Q
    |||| ||||||||    
T  45431639 tgagctaagctca 45431627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 75 - 194
Target Start/End: Complemental strand, 27394626 - 27394507
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||   |||||| || ||  |||||| ||||||| ||||||||| |||    
T  27394626 gtcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccggggttcaaaccccagcccctgcatataa-atgcattatccct 27394528  T
Q  174 taccaagtgagataagctcac 194  Q
    ||||||||||| | |||||||    
T  27394527 taccaagtgagcttagctcac 27394507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 75 - 194
Target Start/End: Complemental strand, 166907 - 166787
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| ||||||||||||| |||||||||| ||||||||||||||||| |||||   ||||||||| ||  |||||| |||| | |||||||||| |||    
T  166907 gtcaagtagcctagcggctaaagaaattcactttaaaggtgaataagtgaggtgtctggggttcgaaccccggcccctgcataaattatgcattatccct 166808  T
Q  174 taccaagtgagataagctcac 194  Q
    ||||||||||| |||||||||    
T  166807 taccaagtgagctaagctcac 166787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 75 - 189
Target Start/End: Original strand, 1102672 - 1102787
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattcct 173  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||| |   ||||| |||| | |||||||||| |||    
T  1102672 gtcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccatggttcgaactccgtcccctgcataaattatgcattatccct 1102771  T
Q  174 taccaagtgagataag 189  Q
    ||||| ||||| ||||    
T  1102772 taccaggtgagctaag 1102787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 50676843 - 50676962
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 173  Q
    |||||| || |||| || ||||||||||||||||||||||||||||||||||||||  |||||||||||    ||||||||||||||||| ||| | |||    
T  50676843 gtcaagtagtctagtggttagagaaattcaccttaaaggtgaataagtggggtgttcggggttcgaaccccaacccctacatataatatgtattgtccct 50676942  T
Q  174 taccaagtgagataagctca 193  Q
    ||||||||||| ||| ||||    
T  50676943 taccaagtgagttaaactca 50676962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 86 - 193
Target Start/End: Complemental strand, 49429568 - 49429461
Alignment:
Q  86 tagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtgag 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||   ||||||||| ||| | |||| |||| || ||||||||| ||||||||| ||||    
T  49429568 tagcggctagagaaattcaccttaaaggtgaataagtggggtgtccggggttcgaaccctggtccctgcatacaa-atgcattatcccttaccaaatgag 49429470  T
Q  185 ataagctca 193  Q
     ||||||||    
T  49429469 ttaagctca 49429461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 50381833 - 50381714
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 173  Q
    |||||||||||||  ||||||||||||||||||||||| ||||||||||||||||   || ||||||||  | ||||| |||||| | |||||||| |||    
T  50381833 gtcaagcagcctaatggctagagaaattcaccttaaagatgaataagtggggtgtccgggattcgaaccccgacccctgcatatattgtgcattatccct 50381734  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  50381733 taccaaatgagttaagctca 50381714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 194
Target Start/End: Original strand, 37756396 - 37756511
Alignment:
Q  82 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaag 180  Q
    ||||||||||| ||||||| |||| ||||||||||||||||||||||||  ||||||||| ||  |||||| |||| | |||||||||| ||||| ||||    
T  37756396 agcctagcggcgagagaaactcacgttaaaggtgaataagtggggtgtttggggttcgaaccccagcccctgcataaattatgcattatcccttatcaag 37756495  T
Q  181 tgag--ataagctcac 194  Q
    ||||  ||||||||||    
T  37756496 tgagctataagctcac 37756511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 33528181 - 33528300
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||   ||||||||| ||  |||||| || | | | |||||||| |||    
T  33528181 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtctggggttcgaaccccagcccctgcacaaattgtgcattatccct 33528280  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  33528281 taccaaatgagctaagctca 33528300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 181
Target Start/End: Complemental strand, 43897721 - 43897614
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataatatgcattattcct 173  Q
    |||||| |||||| ||| |||||||||||||||||||||||||||||||||||||    ||||||||| |    ||||||||||||||| |||| |||||    
T  43897721 gtcaagtagcctaacggttagagaaattcaccttaaaggtgaataagtggggtgtctgaggttcgaacatcaatccctacatataatatacatttttcct 43897622  T
Q  174 taccaagt 181  Q
    ||||||||    
T  43897621 taccaagt 43897614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 54457272 - 54457153
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||   |||||  || ||  || |||||||| | ||||||||||  ||    
T  54457272 gtcaagtagcctagcggctagagaaattcaccttaaaggtgaataaatggggtgtccggggtttaaaccccagctcctacataaattatgcattatctct 54457173  T
Q  174 taccaagtgagataagctca 193  Q
    || |||||||| ||||||||    
T  54457172 tatcaagtgagttaagctca 54457153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 8930953 - 8931007
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  8930953 gtcaagtagcctagcggctagagaaattcactttaaaggtgaataagtggggtgt 8931007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 75 - 184
Target Start/End: Original strand, 22602179 - 22602289
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 173  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||||||| | |||   || ||||||||| | |||||||| ||| | ||||||||||||    
T  22602179 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtgcgatgtctgggattcgaacctcgtcccctacacatattgtgcattattcct 22602278  T
Q  174 taccaagtgag 184  Q
    |||||| ||||    
T  22602279 taccaaatgag 22602289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 75 - 191
Target Start/End: Complemental strand, 47864755 - 47864638
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||   ||||||||| ||   ||||| || ||| | |||||||| |||    
T  47864755 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccaacccctgcacatattgtgcattatccct 47864656  T
Q  174 taccaagtgagataagct 191  Q
    |||||| |||| ||||||    
T  47864655 taccaaatgagctaagct 47864638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 91 - 193
Target Start/End: Complemental strand, 11483716 - 11483613
Alignment:
Q  91 gctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtgagataag 189  Q
    |||||||||||||||||||||| ||||||||||||||||   | ||||||| ||| |||||| || ||| | |||||||| ||||||||| |||| ||||    
T  11483716 gctagagaaattcaccttaaagatgaataagtggggtgtccggagttcgaaccctggcccctgcacatattttgcattatcccttaccaaatgagctaag 11483617  T
Q  190 ctca 193  Q
    ||||    
T  11483616 ctca 11483613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 50271848 - 50271730
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc-ttgcccctacatataatatgcattattcct 173  Q
    |||||| || ||||||| ||||||||||||||||||||||||||||||||| |||   |||||||||||   |||||| |||| || |||||||||  ||    
T  50271848 gtcaagtagtctagcggttagagaaattcaccttaaaggtgaataagtgggatgtacggggttcgaaccacggcccctgcatacaa-atgcattatctct 50271750  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  50271749 taccaaatgagctaagctca 50271730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 29645803 - 29645871
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||| || |||| ||||||||||||||||||||||| ||||||||||||||||   |||||||||||    
T  29645803 gtcaagtagtctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaacc 29645871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 46798701 - 46798582
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| ||||||| || |||||||||  ||||||||| ||||||||||||||||  |||||||||| ||  |||||| || ||| | |||||||| |||    
T  46798701 gtcaagtagcctagtggttagagaaatctaccttaaagatgaataagtggggtgtccagggttcgaatcccggcccctgcacatattgtgcattatccct 46798602  T
Q  174 taccaagtgagataagctca 193  Q
     ||||| |||| ||||||||    
T  46798601 caccaaatgagttaagctca 46798582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 48717521 - 48717422
Alignment:
Q  86 tagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtgag 184  Q
    |||||||| |||||||||||||||||| |||| ||||||||||||  ||||||||| || | ||||| |||| |  ||| ||||||||||||||| ||||    
T  48717521 tagcggctggagaaattcaccttaaagatgaaaaagtggggtgtttggggttcgaacccctacccctgcatacataatgtattattccttaccaaatgag 48717422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 38668247 - 38668193
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||||| || |||| ||||||||||||||||||||||| ||||||||||||||||    
T  38668247 gtcaagtagtctagtggctagagaaattcaccttaaagatgaataagtggggtgt 38668193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 27471623 - 27471555
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||| || |||| ||||||||||||| ||||||||| ||||||||||||||||   |||||||||||    
T  27471623 gtcaagtagtctagtggctagagaaatttaccttaaagatgaataagtggggtgtccggggttcgaacc 27471555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 90 - 193
Target Start/End: Complemental strand, 32421452 - 32421348
Alignment:
Q  90 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtgagataa 188  Q
    ||||||| ||||||| ||||||| ||||||||||||| |||   ||||||||||  | ||||| |||||| |||||||||| ||||||||  |||| |||    
T  32421452 ggctagaaaaattcatcttaaagatgaataagtggggagttcgaggttcgaaccccgacccctgcatatattatgcattatcccttaccagatgagctaa 32421353  T
Q  189 gctca 193  Q
    |||||    
T  32421352 gctca 32421348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 39739393 - 39739325
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||| || |||| ||||||||||||||||||||||| |||||||||| |||||   |||||||||||    
T  39739393 gtcaagtagtctagtggctagagaaattcaccttaaagatgaataagtgaggtgtccggggttcgaacc 39739325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 27817044 - 27817162
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattcct 173  Q
    |||||| ||||||| ||||||||||||||| ||||||| ||||||| ||||||| |  |||||||||| |  |||||| || | | | |||||||| |||    
T  27817044 gtcaagtagcctagtggctagagaaattcaacttaaagatgaataaatggggtg-tccgggttcgaactccggcccctgcacaaattgtgcattatccct 27817142  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  27817143 taccaaatgaggtaagctca 27817162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 28054713 - 28054815
Alignment:
Q  82 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattccttaccaag 180  Q
    |||||||||||||||||| |||||||||| | | ||||||||||||||   |||||||||| ||  ||||| |||| | |||||| ||| ||||||||||    
T  28054713 agcctagcggctagagaa-ttcaccttaaggataaataagtggggtgtctggggttcgaactctgacccctgcataaattatgcaatatcccttaccaag 28054811  T
Q  181 tgag 184  Q
    ||||    
T  28054812 tgag 28054815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 184
Target Start/End: Original strand, 28065138 - 28065240
Alignment:
Q  82 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattccttaccaag 180  Q
    |||||||||||||||||| |||||||||| | | ||||||||||||||   |||||||||| ||  ||||| |||| | |||||| ||| ||||||||||    
T  28065138 agcctagcggctagagaa-ttcaccttaaggataaataagtggggtgtctggggttcgaactctgacccctgcataaattatgcaatatcccttaccaag 28065236  T
Q  181 tgag 184  Q
    ||||    
T  28065237 tgag 28065240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 194
Target Start/End: Complemental strand, 31419681 - 31419582
Alignment:
Q  96 agaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtgagataagctcac 194  Q
    |||||||||| || |||||||||||||||||||||  ||||||||| ||  ||||||||| ||| | ||| || | ||||||||| |||| |||||||||    
T  31419681 agaaattcacttttaaggtgaataagtggggtgtttggggttcgaaccccagcccctacacatattgtgcgttgtcccttaccaaatgagttaagctcac 31419582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 29226427 - 29226377
Alignment:
Q  93 tagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||||||||||||||||| ||||||||||||||||   |||||||||||    
T  29226427 tagagaaattcaccttaaagatgaataagtggggtgtacggggttcgaacc 29226377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 125
Target Start/End: Original strand, 31435477 - 31435527
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggg 125  Q
    |||||| || |||| ||||||||||||||||||||||| ||||||||||||    
T  31435477 gtcaagtagtctagtggctagagaaattcaccttaaagatgaataagtggg 31435527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 86 - 120
Target Start/End: Complemental strand, 41768481 - 41768447
Alignment:
Q  86 tagcggctagagaaattcaccttaaaggtgaataa 120  Q
    |||||||||||||||||||||||||||||||||||    
T  41768481 tagcggctagagaaattcaccttaaaggtgaataa 41768447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 44062018 - 44062072
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||||| || |||| ||||||||| ||||||||||||| ||||||||||||||||    
T  44062018 gtcaagtagtctagtggctagagacattcaccttaaagatgaataagtggggtgt 44062072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 122
Target Start/End: Original strand, 50332935 - 50332981
Alignment:
Q  76 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagt 122  Q
    ||||| || |||||||||||||||||||| |||||||||||||||||    
T  50332935 tcaagtagtctagcggctagagaaattcatcttaaaggtgaataagt 50332981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 54964517 - 54964571
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||||| |||||||||||| ||||||| |||||||||||||||  ||||||||||    
T  54964517 gtcaagtagcctagcggctggagaaatacaccttaaaggtgaaatagtggggtgt 54964571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 25165563 - 25165440
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcacctt---aaaggtgaataagt-ggggtgttaagggttcgaa-ccttgcccctacatataatatgcattat 169  Q
    |||||||||||||| |||||||||||||||||||   |||| ||||||||| |||||||   ||||||||| ||  | |||| || ||| | ||||||||    
T  25165563 gtcaagcagcctagtggctagagaaattcaccttaaaaaagatgaataagtgggggtgtccggggttcgaaccccggtccctgcacatattgtgcattat 25165464  T
Q  170 tccttaccaagtgagataagctca 193  Q
     ||||||||| |||| ||||||||    
T  25165463 cccttaccaaatgagctaagctca 25165440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 985905 - 985949
Alignment:
Q  85 ctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||    
T  985905 ctagtggctagagaaattcacctttaagatgaataagtggggtgt 985949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 9320935 - 9321003
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||| ||||||| || |||||||||||| ||| ||| |||||||||||||||||  || ||||||||    
T  9320935 gtcaagtagcctagtggttagagaaattcatctttaagatgaataagtggggtgttcgggtttcgaacc 9321003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 9738465 - 9738421
Alignment:
Q  85 ctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||||||||| ||||||||||||||||| ||||||||||| ||||    
T  9738465 ctagcggctaaagaaattcaccttaaagatgaataagtggagtgt 9738421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 24651231 - 24651195
Alignment:
Q  87 agcggctagagaaattcaccttaaaggtgaataagtg 123  Q
    ||||| |||||||||||||||||||||||||||||||    
T  24651231 agcggttagagaaattcaccttaaaggtgaataagtg 24651195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 49639124 - 49639060
Alignment:
Q  99 aattcacctta-aaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataata 161  Q
    ||||||||||| |||||||||||||||||||||  ||||||||| ||  ||||||||||||||||    
T  49639124 aattcaccttacaaggtgaataagtggggtgttcggggttcgaaccccggcccctacatataata 49639060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 193
Target Start/End: Complemental strand, 34225296 - 34225195
Alignment:
Q  95 gagaaattcaccttaaaggtgaataagtggggt---gttaagggttcgaaccttgcccctacatataatatgcattattccttaccaagtgagataagct 191  Q
    ||||||||||||||||||||||||||||| |||   ||   ||||| ||| || |||||| || ||| | |||||||| ||||||||| |||| ||||||    
T  34225296 gagaaattcaccttaaaggtgaataagtgaggtgtcgtccggggtttgaatctagcccctgcacatattgtgcattatcccttaccaaatgagctaagct 34225197  T
Q  192 ca 193  Q
    ||    
T  34225196 ca 34225195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 194
Target Start/End: Complemental strand, 7239906 - 7239805
Alignment:
Q  90 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattccttaccaagtgagataag 189  Q
    |||||||||||| ||||||||||  ||||||||||||||||   ||||||||||   |||||||| ||| | || | ||| ||||||||| |||  ||||    
T  7239906 ggctagagaaatccaccttaaagacgaataagtggggtgttcgaggttcgaacc---cccctacacatattgtgtaatatcccttaccaaatgaactaag 7239810  T
Q  190 ctcac 194  Q
    |||||    
T  7239809 ctcac 7239805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 229
Target Start/End: Original strand, 24647920 - 24647950
Alignment:
Q  199 actccatttattttgtcaaatggagaggatc 229  Q
    |||||||||||||||||||||||||||||||    
T  24647920 actccatttattttgtcaaatggagaggatc 24647950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 40415538 - 40415592
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||||| || ||||| | ||||||||||||||||||| ||||||||||| |||||    
T  40415538 gtcaagtagtctagctgttagagaaattcaccttaaaagtgaataagtgaggtgt 40415592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 55426229 - 55426114
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataatatgcattattcct 173  Q
    |||||| ||||||| |||||||||||||||||||||||    || ||||||||||   ||||||||||||  |||| | || ||| | |||||||| | |    
T  55426229 gtcaagtagcctagtggctagagaaattcaccttaaag----atgagtggggtgtccggggttcgaacctcggcccatgcacatattgtgcattatcctt 55426134  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  55426133 taccaaatgagctaagctca 55426114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 21249001 - 21249034
Alignment:
Q  110 aaggtgaataagtggggtgttaagggttcgaacc 143  Q
    ||||||||||||||||||||| ||||||||||||    
T  21249001 aaggtgaataagtggggtgttcagggttcgaacc 21249034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 32508793 - 32508838
Alignment:
Q  99 aattcacctta-aaggtgaataagtggggtgttaagggttcgaacc 143  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||    
T  32508793 aattcaccttataaggtgaataagtggggtgttcggggttcgaacc 32508838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 142
Target Start/End: Original strand, 335029 - 335073
Alignment:
Q  99 aattcacctta-aaggtgaataagtggggtgttaagggttcgaac 142  Q
    ||||||||||| ||||||||||||||||||||  |||||||||||    
T  335029 aattcaccttataaggtgaataagtggggtgtccagggttcgaac 335073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 7518059 - 7517991
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||| ||||||  |||||||| ||||||| || ||| || ||||||||||||||  |||||||||||    
T  7518059 gtcaagtagcctaatggctagaggaattcacttttaagatggataagtggggtgttcggggttcgaacc 7517991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 194
Target Start/End: Original strand, 17602668 - 17602743
Alignment:
Q  119 aagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtgagataagctcac 194  Q
    |||||||||||   |||||||||||| | ||||||||||||||||||| || ||| |||||| |||| |||||||||    
T  17602668 aagtggggtgtccggggttcgaacctcggcccctacatataatatgcaata-tccctaccaactgagctaagctcac 17602743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 161
Target Start/End: Complemental strand, 28951950 - 28951898
Alignment:
Q  110 aaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataata 161  Q
    |||||||||||||||||||||  ||||||||||| || ||||| |||||||||    
T  28951950 aaggtgaataagtggggtgttcggggttcgaaccctgacccctgcatataata 28951898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 194
Target Start/End: Complemental strand, 30693328 - 30693227
Alignment:
Q  92 ctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacctt-gcccctacatataatatgcattattccttaccaagtgagataagc 190  Q
    ||||||||||  |||| ||||||||||||||| ||| |   ||||||||| ||  ||||||  ||||||||||||||||||||||  ||||||| ||||     
T  30693328 ctagagaaat--acctcaaaggtgaataagtgaggtatccggggttcgaatctcagcccctgtatataatatgcattattccttattaagtgagttaagt 30693231  T
Q  191 tcac 194  Q
    ||||    
T  30693230 tcac 30693227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 129
Target Start/End: Original strand, 33830362 - 33830398
Alignment:
Q  93 tagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||||||||||||||||||  ||||||||||||||||    
T  33830362 tagagaaattcaccttaaaaatgaataagtggggtgt 33830398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 125
Target Start/End: Complemental strand, 40412368 - 40412336
Alignment:
Q  93 tagagaaattcaccttaaaggtgaataagtggg 125  Q
    ||||||||||||| |||||||||||||||||||    
T  40412368 tagagaaattcactttaaaggtgaataagtggg 40412336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 5e-28; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 75 - 189
Target Start/End: Complemental strand, 19424165 - 19424050
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 173  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||  | ||||| ||||||||||||||||| |||    
T  19424165 gtcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccggggttcgaaccccgacccctgcatataatatgcattatccct 19424066  T
Q  174 taccaagtgagataag 189  Q
    || ||| |||| ||||    
T  19424065 tatcaaatgagctaag 19424050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 75 - 196
Target Start/End: Original strand, 35195587 - 35195709
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||   ||||||||| ||| | |||| ||||||||||||||||| |||    
T  35195587 gtcaagtagcctagcggctagagaaatttaccttaaaggtgaataagtggagtgtacggggttcgaaccctggtccctgcatataatatgcattatccct 35195686  T
Q  174 taccaagtgagataagctcacat 196  Q
    ||  ||||||| |||||||||||    
T  35195687 tattaagtgagctaagctcacat 35195709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 24134600 - 24134719
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||   ||||||||| ||  |||||| || ||| | |||||||| |||    
T  24134600 gtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatccct 24134699  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  24134700 taccaaatgagctaagctca 24134719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 29332403 - 29332349
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29332403 gtcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 29332349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 76 - 193
Target Start/End: Original strand, 40209892 - 40210010
Alignment:
Q  76 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcctt 174  Q
    ||||| || |||| ||| |||||||||||||||||||||||| || || ||||||  |||||||||| | | ||||||||||||||||||||| | ||||    
T  40209892 tcaagtagtctagtggccagagaaattcaccttaaaggtgaaaaaatgaggtgtttggggttcgaacttcgacccctacatataatatgcattgtccctt 40209991  T
Q  175 accaagtgagataagctca 193  Q
    |||||||||  ||||||||    
T  40209992 accaagtgatctaagctca 40210010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 194
Target Start/End: Complemental strand, 22779327 - 22779222
Alignment:
Q  90 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtgagataa 188  Q
    |||||||||||||||  ||||||||||||||||||||||||  |||||||||||  | | |||  ||| |||||||||||| |||||||||||||| |||    
T  22779327 ggctagagaaattcattttaaaggtgaataagtggggtgtttggggttcgaaccccgactcctgtataaaatatgcattatcccttaccaagtgagctaa 22779228  T
Q  189 gctcac 194  Q
    ||||||    
T  22779227 gctcac 22779222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 2350351 - 2350419
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||  |||||||||||    
T  2350351 gtcaagtagcctagcggctaaagaaattcactttaaaggtgaataagtggggtgttcggggttcgaacc 2350419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 10123029 - 10123097
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||  |||||||||||    
T  10123029 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtttggggttcgaacc 10123097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 75 - 174
Target Start/End: Original strand, 42946443 - 42946543
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| |||||| |||||||||||||||||||| ||||||||||||||||||||   |||||| || ||  |||||| ||||||||||||||||| |||    
T  42946443 gtcaagtagcctaacggctagagaaattcacctttaaggtgaataagtggggtgtccggggttcaaaccccagcccctgcatataatatgcattatccct 42946542  T
Q  174 t 174  Q
    |    
T  42946543 t 42946543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 25031473 - 25031527
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  25031473 gtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggtgt 25031527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 86 - 194
Target Start/End: Original strand, 1862827 - 1862935
Alignment:
Q  86 tagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattccttaccaagtgaga 185  Q
    ||||||||||||||||||||||| ||||| |||| |||| ||||    ||||  ||||||  |||| ||||||||||||||||| ||||| ||||||||     
T  1862827 tagcggctagagaaattcaccttcaaggtaaatatgtggagtgtctgaggtttaaaccttaacccttcatataatatgcattatcccttatcaagtgagc 1862926  T
Q  186 taagctcac 194  Q
    |||||||||    
T  1862927 taagctcac 1862935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 3347679 - 3347747
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||||||||||| | ||||||||||||||||||||| ||||||||||||||||   |||||||||||    
T  3347679 gtcaagcagcctagtgactagagaaattcaccttaaagatgaataagtggggtgtacggggttcgaacc 3347747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 43109214 - 43109333
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||| || |||||   ||||||||| ||  |||||| || ||| | |||||||| |||    
T  43109214 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataaatgaggtgtccggggttcgaaccccggcccctgcacatattttgcattatccct 43109313  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  43109314 taccaaatgagctaagctca 43109333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 27980124 - 27980172
Alignment:
Q  90 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttc 138  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  27980124 ggctagagaaatttaccttaaaggtgaataagtggggtgttaggggttc 27980172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 40061562 - 40061443
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| ||||||| |||||||||||| |||||||||| ||||||||||||||||   | ||||||| ||  ||||||| | ||| | |||| ||| |||    
T  40061562 gtcaagtagcctagtggctagagaaatccaccttaaagatgaataagtggggtgtccggagttcgaaccccagcccctatacatattgtgcactatccct 40061463  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  40061462 taccaaatgagttaagctca 40061443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 49620091 - 49619972
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 173  Q
    |||||| ||||||| |||||||||||||||| |||||| ||||||||||||||||   ||||  |||||  | ||||| || ||| | |||||||| |||    
T  49620091 gtcaagtagcctagtggctagagaaattcactttaaagatgaataagtggggtgtccggggtctgaaccccgacccctgcacatattgtgcattatccct 49619992  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  49619991 taccaaatgagctaagctca 49619972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 193
Target Start/End: Complemental strand, 50011610 - 50011507
Alignment:
Q  91 gctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtgagataag 189  Q
    |||||||||||||||||||||| |||||||||||| |||   ||||||||| ||  |||||| || ||| | |||||||| ||||||||| |||| ||||    
T  50011610 gctagagaaattcaccttaaagatgaataagtgggatgtctggggttcgaaccccagcccctgcacatattgtgcattatcccttaccaaatgagctaag 50011511  T
Q  190 ctca 193  Q
    ||||    
T  50011510 ctca 50011507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 184
Target Start/End: Original strand, 34940436 - 34940502
Alignment:
Q  118 taagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattccttaccaagtgag 184  Q
    ||||||||||||   ||||||||||||  ||||| ||||||||||||||||| ||||||||||||||    
T  34940436 taagtggggtgtccggggttcgaacctgacccctgcatataatatgcattatcccttaccaagtgag 34940502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 173
Target Start/End: Complemental strand, 35111747 - 35111669
Alignment:
Q  96 agaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataat-atgcattattcct 173  Q
    |||||||||| || || ||||||||||||||||||| |||||||||||  |||||| |||||||| ||||||| |||||    
T  35111747 agaaattcacttttaaagtgaataagtggggtgttaggggttcgaaccccgcccctgcatataataatgcattgttcct 35111669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 27054815 - 27054762
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtg 128  Q
    |||||| ||||||| ||||||||||||||||||||||| |||||||||| ||||    
T  27054815 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtgaggtg 27054762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 95 - 143
Target Start/End: Complemental strand, 8893959 - 8893911
Alignment:
Q  95 gagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||    
T  8893959 gagaaattcaccttaaagatgaataagtggggtgtttggggttcgaacc 8893911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 90 - 193
Target Start/End: Original strand, 14262712 - 14262816
Alignment:
Q  90 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtgagataa 188  Q
    ||||||||||||||||||||||| ||||||||| ||||||   |||||||||||  | ||||| |||||| | |||||||| ||||| ||| |||| |||    
T  14262712 ggctagagaaattcaccttaaagatgaataagtagggtgtccggggttcgaaccccgacccctgcatatattgtgcattatcccttatcaaatgagttaa 14262811  T
Q  189 gctca 193  Q
     ||||    
T  14262812 tctca 14262816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 174
Target Start/End: Complemental strand, 25299978 - 25299878
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 173  Q
    |||||| |||||||||||| ||||||||||||||  |||||||  ||||||||||  ||||| |||||| || ||||| ||||||  ||||||||| |||    
T  25299978 gtcaagtagcctagcggctggagaaattcaccttcgaggtgaaatagtggggtgtccagggtacgaaccctgacccctgcatatataatgcattatccct 25299879  T
Q  174 t 174  Q
    |    
T  25299878 t 25299878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 178
Target Start/End: Original strand, 31964592 - 31964696
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 173  Q
    |||||| ||| ||||||||||| ||||| || |||||| |||||||||| ||||||  |||||| |||| ||   ||||||||||||||||||| |||||    
T  31964592 gtcaagtagcttagcggctagaaaaatttactttaaagatgaataagtgaggtgttcggggttcaaaccctgtttcctacatataatatgcatttttcct 31964691  T
Q  174 tacca 178  Q
     ||||    
T  31964692 cacca 31964696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 82 - 193
Target Start/End: Complemental strand, 44583699 - 44583588
Alignment:
Q  82 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaag 180  Q
    |||||| ||||||||||||||||||||||||||||||| |||| ||||   | |||||||||  | |||||||||| || ||| ||||| ||||| |||     
T  44583699 agcctatcggctagagaaattcaccttaaaggtgaataggtggagtgtccggagttcgaaccccgacccctacatacaa-atgtattatcccttatcaaa 44583601  T
Q  181 tgagataagctca 193  Q
    |||| ||||||||    
T  44583600 tgagttaagctca 44583588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 7438740 - 7438621
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 173  Q
    |||||| || |||| ||||| ||||||||||||| ||| ||||||||||||||||   | |||||||||  | |||||||| | | | |||||||| |||    
T  7438740 gtcaagtagtctagtggctaaagaaattcacctttaagatgaataagtggggtgtccggagttcgaaccccgacccctacacaaattgtgcattatccct 7438641  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  7438640 taccaaatgagctaagctca 7438621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 12973254 - 12973373
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataatatgcattattcct 173  Q
    |||||| || |||| ||||| ||||||| ||||||||| |||||||||||||||| | | ||| ||| ||  |||||| |||||| | |||||||| |||    
T  12973254 gtcaagtagtctagtggctaaagaaatttaccttaaagatgaataagtggggtgtcaggagtttgaatctcggcccctgcatatattgtgcattatccct 12973353  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||| ||||    
T  12973354 taccaaatgagctaaactca 12973373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 15417793 - 15417912
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| ||||||| | ||||||||||||| ||||||| ||||||||||||||||    | |||||| ||  ||||||||| ||| | |||||||| | |    
T  15417793 gtcaagtagcctagtgactagagaaattcatcttaaagatgaataagtggggtgtccgagcttcgaaccccagcccctacacatattgtgcattatcctt 15417892  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  15417893 taccaaatgagctaagctca 15417912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 34702289 - 34702408
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| || |||| ||||| ||||||||| ||||||| |||||||||| |||||   ||||||||| ||  |||||| || ||| | |||||||| |||    
T  34702289 gtcaagtagtctagtggctaaagaaattcatcttaaagatgaataagtgaggtgtccggggttcgaaccccggcccctgcacatattgtgcattatccct 34702388  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  34702389 taccaaatgagctaagctca 34702408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 47651990 - 47651872
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| |||| || ||||||||||||||||||||||  |||||||||||| |||  ||| |||||| ||  |||||| || ||| | |||||||| |||    
T  47651990 gtcaagtagcccagtggctagagaaattcaccttaaa-atgaataagtgggatgtctaggattcgaaccccagcccctgcacatattgtgcattatccct 47651892  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  47651891 taccaaatgagctaagctca 47651872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 50065114 - 50065075
Alignment:
Q  90 ggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  50065114 ggctagagaaattcaccttaaagatgaataagtggggtgt 50065075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 12148549 - 12148603
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    ||||||||| |||| | | ||||||||||||||||||| ||||||||||||||||    
T  12148549 gtcaagcagtctagtgtccagagaaattcaccttaaagatgaataagtggggtgt 12148603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 46532471 - 46532525
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||||| ||| |||||| |||||||||||||||||||||||||  ||||||||||    
T  46532471 gtcaagtagcttagcggttagagaaattcaccttaaaggtgaaatagtggggtgt 46532525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 49239823 - 49239877
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||||| ||| ||| ||||||||||||| ||||||||| ||||||||||||||||    
T  49239823 gtcaagtagcttagtggctagagaaatttaccttaaagatgaataagtggggtgt 49239877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 16985911 - 16985980
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct 144  Q
    |||||| | ||||| ||||||||||||||||||||||| |||||||||  |||||   ||||||||||||    
T  16985911 gtcaagtaacctagtggctagagaaattcaccttaaagatgaataagttaggtgtccggggttcgaacct 16985980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 130
Target Start/End: Original strand, 20267885 - 20267922
Alignment:
Q  93 tagagaaattcaccttaaaggtgaataagtggggtgtt 130  Q
    |||||||||||||||||||||| |||||||||||||||    
T  20267885 tagagaaattcaccttaaaggtaaataagtggggtgtt 20267922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 47428886 - 47428939
Alignment:
Q  90 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    ||||| |||||||||| |||||| |||||||||||||||||  |||||||||||    
T  47428886 ggctaaagaaattcactttaaagatgaataagtggggtgtttggggttcgaacc 47428939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 130
Target Start/End: Complemental strand, 49895836 - 49895799
Alignment:
Q  93 tagagaaattcaccttaaaggtgaataagtggggtgtt 130  Q
    |||||||||||| |||||||||||||||||||||||||    
T  49895836 tagagaaattcatcttaaaggtgaataagtggggtgtt 49895799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 193
Target Start/End: Original strand, 22853748 - 22853856
Alignment:
Q  86 tagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataatatgcattattccttaccaagtgag 184  Q
    ||||| ||||||||||||| |||||| | |||||||||  |||||   |||||||||||  ||||||||||||  |||| ||||| ||||| ||| ||||    
T  22853748 tagcgtctagagaaattcatcttaaaagagaataagtgaagtgtttgaggttcgaacctcagcccctacatattctatgtattatcccttatcaaatgag 22853847  T
Q  185 ataagctca 193  Q
     ||||||||    
T  22853848 ttaagctca 22853856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 140
Target Start/End: Complemental strand, 35309822 - 35309778
Alignment:
Q  96 agaaattcaccttaaaggtgaataagtggggtgttaagggttcga 140  Q
    ||||||||||||||||| |||||||||||||||||  ||||||||    
T  35309822 agaaattcaccttaaagatgaataagtggggtgttcggggttcga 35309778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 41618736 - 41618804
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||| || || |||||||||||||||||||||||| |||||||| || ||||||  || ||||||||    
T  41618736 gtcaagtagtctggcggctagagaaattcaccttaaatgtgaataactgaggtgttcgggattcgaacc 41618804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 129
Target Start/End: Original strand, 10790476 - 10790523
Alignment:
Q  82 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||||| |||||| ||||||||||||||||||| ||||||| ||||||    
T  10790476 agcctaacggctacagaaattcaccttaaaggtaaataagtagggtgt 10790523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 142
Target Start/End: Original strand, 23368708 - 23368775
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac 142  Q
    |||||| || |||| ||||||| ||||||||||| || |||||||||||||||||   ||||||||||    
T  23368708 gtcaagtagactagtggctagataaattcacctttaatgtgaataagtggggtgtccggggttcgaac 23368775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 48497189 - 48497308
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattcct 173  Q
    |||||| ||||||| ||||||||||||| ||||||||| ||||||| ||| ||||   || ||||||| |  |||||| || ||| | |||||||| |||    
T  48497189 gtcaagtagcctagtggctagagaaatttaccttaaagatgaataaatggagtgtccgggattcgaactccggcccctgcacatattgtgcattatccct 48497288  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||| ||||    
T  48497289 taccaaatgagctaaactca 48497308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 1031683 - 1031621
Alignment:
Q  99 aattcacctta-aaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataa 159  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| ||  |||||||||||||    
T  1031683 aattcaccttataaggtgaataagtggggtgttcggggttcgaactctgacccctacatataa 1031621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 4127018 - 4126964
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||||| || |||| ||||||| ||||||||||||||| ||||||| ||||||||    
T  4127018 gtcaagtagtctagtggctagataaattcaccttaaagatgaataaatggggtgt 4126964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 143
Target Start/End: Original strand, 50302837 - 50302894
Alignment:
Q  85 ctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||| ||||||||||||||||||||||| ||||||||| | ||| | ||||||||||||    
T  50302837 ctagtggctagagaaattcaccttaaagatgaataagtagagtg-tcagggttcgaacc 50302894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 184
Target Start/End: Complemental strand, 7006710 - 7006601
Alignment:
Q  76 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacctt-gcccctacatataatatgcattattcctt 174  Q
    ||||| ||| ||||||| ||| |||||||| ||||| |||||||| | |||| ||  |||||| ||||   ||| || |||||||||||||||||  |||    
T  7006710 tcaagtagcatagcggccagataaattcactttaaatgtgaataaattgggtattcggggttcaaaccccagcctctgcatataatatgcattatctctt 7006611  T
Q  175 accaagtgag 184  Q
    ||||||||||    
T  7006610 accaagtgag 7006601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 29936658 - 29936711
Alignment:
Q  76 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    ||||| ||||||  |||||||||||||||| || ||| ||||||||||||||||    
T  29936658 tcaagtagcctaatggctagagaaattcacttttaagatgaataagtggggtgt 29936711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 161
Target Start/End: Complemental strand, 39238826 - 39238748
Alignment:
Q  82 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataata 161  Q
    |||||||||||||||  ||||||| || || |||||||||||||||||   ||||||||||||  |||||| |||||||||    
T  39238826 agcctagcggctaga--aattcacttttaaagtgaataagtggggtgtccggggttcgaacctcggcccctgcatataata 39238748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 10629411 - 10629363
Alignment:
Q  147 cccctacatataatatgcattattccttaccaagtgagataagctcaca 195  Q
    ||||| ||||||| |||||||||  ||||||||||||| ||||||||||    
T  10629411 cccctgcatataaaatgcattatatcttaccaagtgagttaagctcaca 10629363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 15550988 - 15550940
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtg 123  Q
    |||||| | ||||| ||||| ||||||||||||||||| ||||||||||    
T  15550988 gtcaagtaacctagtggctacagaaattcaccttaaagatgaataagtg 15550940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 15774311 - 15774375
Alignment:
Q  99 aattcacctta-aaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataata 161  Q
    ||||||||||| ||||||||||||||||||||   |||||||||||  | |||||||||||||||    
T  15774311 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccgacccctacatataata 15774375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 21884671 - 21884607
Alignment:
Q  99 aattcacctta-aaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataata 161  Q
    ||||||||||| ||||||||||||||||||||   ||||||||||||  |||||| |||||||||    
T  21884671 aattcaccttataaggtgaataagtggggtgtctggggttcgaacctcggcccctgcatataata 21884607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 143
Target Start/End: Complemental strand, 22346529 - 22346470
Alignment:
Q  82 agcctagcggctagagaaattcacctta-aaggtgaataagtggggtgttaagggttcgaacc 143  Q
    ||||||| ||||||||   ||||||||| ||||||||||| ||||||||| ||||||||||||    
T  22346529 agcctagtggctagag---ttcaccttataaggtgaataaatggggtgttcagggttcgaacc 22346470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 161
Target Start/End: Original strand, 28916929 - 28916981
Alignment:
Q  110 aaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataata 161  Q
    |||||||||||||||||||||  |||||||||| |  ||||||||||||||||    
T  28916929 aaggtgaataagtggggtgtttggggttcgaacttcagcccctacatataata 28916981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 34560337 - 34560409
Alignment:
Q  99 aattcacctta-aaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataat-atgcattat 169  Q
    ||||||||||| ||||||||||||||||||||    |||||||||||  ||| |||||||||| |||||||||    
T  34560337 aattcaccttataaggtgaataagtggggtgtccgaggttcgaacctgacccatacatataataatgcattat 34560409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 194
Target Start/End: Original strand, 35605615 - 35605690
Alignment:
Q  119 aagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtgagataagctcac 194  Q
    |||||||||||| ||||||||||||  | ||||| ||||||||||||| || ||| |||||| |||| |||||||||    
T  35605615 aagtggggtgtttagggttcgaaccccgacccctgcatataatatgcaata-tccctaccaactgagctaagctcac 35605690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 40513275 - 40513235
Alignment:
Q  155 tataatatgcattattccttaccaagtgagataagctcaca 195  Q
    ||||||||||||||| ||||||||| |||| ||||||||||    
T  40513275 tataatatgcattatcccttaccaaatgagctaagctcaca 40513235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 1e-25; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 26606085 - 26606204
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||| ||||  ||||||| || ||  |||||||||||| || ||||||||||||    
T  26606085 gtcaagtagccaagcggctagagaaattcaccttaaaggtgaataagtggagtgtccagggttcaaaccccggcccctacatatgatttgcattattcct 26606184  T
Q  174 taccaagtgagataagctca 193  Q
    || |||||||  ||||||||    
T  26606185 tatcaagtgaactaagctca 26606204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 76 - 193
Target Start/End: Complemental strand, 15025274 - 15025156
Alignment:
Q  76 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcctt 174  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||  ||||| ||| ||  ||||||  ||| |||||||||||| ||||    
T  15025274 tcaagtagcctagcgggtagagaaattcaccttaaaggtgaataagtggggtgttcggggtttgaaccccggcccctgtataaaatatgcattatccctt 15025175  T
Q  175 accaagtgagataagctca 193  Q
    ||||| |||| ||||||||    
T  15025174 accaaatgagttaagctca 15025156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 5228189 - 5228071
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| ||  |||||| |||| || ||||||||| | |    
T  5228189 gtcaagtagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccaggattcgaaccccggcccctgcata-aaaatgcattatcctt 5228091  T
Q  174 taccaagtgagataagctca 193  Q
    || |||||||| ||||||||    
T  5228090 tatcaagtgagctaagctca 5228071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 195
Target Start/End: Complemental strand, 46243400 - 46243289
Alignment:
Q  85 ctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattccttaccaagtga 183  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||  | |||||||| |    ||||| |||||||||||||||| ||||||||| |||    
T  46243400 ctagcggttagagaaattcaccttaaaggtgaataagtggggtgttcggagttcgaactccgatccctatatataatatgcattatcccttaccaaatga 46243301  T
Q  184 gataagctcaca 195  Q
    | ||||||||||    
T  46243300 gctaagctcaca 46243289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 194
Target Start/End: Original strand, 9668792 - 9668910
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacctt-gcccctacatataatatgcattattcct 173  Q
    |||||| ||||||||||| ||||||||||||||||| ||||||||| || ||||||  ||||||||||| | | |||| |||| |||||||||||| |||    
T  9668792 gtcaagtagcctagcggccagagaaattcaccttaa-ggtgaataaatgaggtgtttggggttcgaaccctagtccctgcata-aatatgcattatccct 9668889  T
Q  174 taccaagtgagataagctcac 194  Q
    ||||||||||| |||||||||    
T  9668890 taccaagtgagctaagctcac 9668910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 184
Target Start/End: Original strand, 28914853 - 28914964
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg--cccctacatataatatgcattattcc 172  Q
    |||||| ||||||| ||||||||||||||||||| || |||||||||||||||||   |||||||||||  |  ||||| ||||||||||||||||| ||    
T  28914853 gtcaagtagcctagtggctagagaaattcacctttaaagtgaataagtggggtgtccggggttcgaaccccggccccctgcatataatatgcattatccc 28914952  T
Q  173 ttaccaagtgag 184  Q
    |||||| |||||    
T  28914953 ttaccatgtgag 28914964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 179
Target Start/End: Original strand, 4956068 - 4956173
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 173  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||  ||||||||||||  | ||||| || ||| | |||||||| |||    
T  4956068 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccagggttcgaaccccgacccctgcacatattgtgcattatccct 4956167  T
Q  174 taccaa 179  Q
    ||||||    
T  4956168 taccaa 4956173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 195
Target Start/End: Complemental strand, 23602393 - 23602272
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattcct 173  Q
    |||||| || |||| ||||| |||||||||||||||||||||||||||| |||||   |||||||||| |  | | || |||||||||||||||||||||    
T  23602393 gtcaagtagtctagtggctaaagaaattcaccttaaaggtgaataagtgaggtgtccggggttcgaactccggtcactgcatataatatgcattattcct 23602294  T
Q  174 taccaagtgagataagctcaca 195  Q
    || ||| |||| ||||||||||    
T  23602293 tatcaaatgagctaagctcaca 23602272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 48433686 - 48433805
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||   ||||| ||| ||  |||||| || ||| | |||||||| |||    
T  48433686 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggtttgaaccccggcccctgcacatattgtgcattatccct 48433785  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  48433786 taccaaatgagctaagctca 48433805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 82 - 195
Target Start/End: Original strand, 44662446 - 44662560
Alignment:
Q  82 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaag 180  Q
    |||||||||||| |||||||||||||||||||||||  ||||||||||   ||||||||| ||  |||||| |||| |  ||||||||| ||||||| ||    
T  44662446 agcctagcggctggagaaattcaccttaaaggtgaaatagtggggtgtccggggttcgaaccccggcccctgcatacataatgcattatcccttacctag 44662545  T
Q  181 tgagataagctcaca 195  Q
    |||| ||||||||||    
T  44662546 tgagctaagctcaca 44662560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 75 - 192
Target Start/End: Original strand, 6548688 - 6548805
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattcctt 174  Q
    |||||| |||||||||||  |||||||||||||||||||||||  ||||||||||   | |||||||||  | |||| |||| |  ||||||||||||||    
T  6548688 gtcaagtagcctagcggccggagaaattcaccttaaaggtgaaatagtggggtgtccggagttcgaaccccggccctgcatacataatgcattattcctt 6548787  T
Q  175 accaagtgagataagctc 192  Q
    || ||||||| |||||||    
T  6548788 actaagtgagctaagctc 6548805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 193
Target Start/End: Complemental strand, 40273925 - 40273821
Alignment:
Q  90 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtgagataa 188  Q
    ||||||||||||||||||||||| ||||||||||||||||   ||||||||| ||  |||||| || ||| | |||||||| ||||||||| |||| |||    
T  40273925 ggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaa 40273826  T
Q  189 gctca 193  Q
    |||||    
T  40273825 gctca 40273821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 14707411 - 14707293
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| || ||| |||||||||||||||||  ||||||||||||||||||||||   ||||||||| ||   ||||| ||||||| ||||||||| |||    
T  14707411 gtcaagtagtctaacggctagagaaattcactataaaggtgaataagtggggtgtccggggttcgaaccccaacccctgcatataa-atgcattatccct 14707313  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  14707312 taccaaatgagctaagctca 14707293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 143
Target Start/End: Original strand, 10091448 - 10091501
Alignment:
Q  90 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    ||||||||||||||||||||||||||||||||| ||||||  ||||||||||||    
T  10091448 ggctagagaaattcaccttaaaggtgaataagttgggtgtctagggttcgaacc 10091501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 82 - 194
Target Start/End: Complemental strand, 29357912 - 29357800
Alignment:
Q  82 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattccttaccaagt 181  Q
    |||||||||||   ||||||||||||||||||||||  ||||| ||||  |||||||||||   | |||| ||||||  ||||||||| ||||| |||||    
T  29357912 agcctagcggccgaagaaattcaccttaaaggtgaaatagtggagtgtccagggttcgaactccggccctgcatatataatgcattatcccttatcaagt 29357813  T
Q  182 gagataagctcac 194  Q
    ||| |||||||||    
T  29357812 gagctaagctcac 29357800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 31793587 - 31793468
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 173  Q
    |||||| | ||||| |||||||||||| |||||||||| ||||||||||||||||   |||||||||||  | ||||| || ||| | |||||||| |||    
T  31793587 gtcaagtaacctagtggctagagaaatccaccttaaagatgaataagtggggtgtccggggttcgaaccccgacccctgcacatattgtgcattatccct 31793488  T
Q  174 taccaagtgagataagctca 193  Q
    || ||| |||| ||||||||    
T  31793487 taacaaatgagctaagctca 31793468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 20530015 - 20529961
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||||| |||| | || ||||||||||||||||||||||||||||||||||||||    
T  20530015 gtcaagtagcccaacgactagagaaattcaccttaaaggtgaataagtggggtgt 20529961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 193
Target Start/End: Original strand, 23824577 - 23824686
Alignment:
Q  84 cctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataatatgcattattccttaccaagtg 182  Q
    ||||| ||||||||||||||||||||||| ||||||||| ||||| |  ||||||||||||  |||| | || ||| | |||||||| ||||||||| ||    
T  23824577 cctagtggctagagaaattcaccttaaagatgaataagtagggtg-tccgggttcgaacctcggcccatgcacatattgtgcattatcccttaccaaatg 23824675  T
Q  183 agataagctca 193  Q
    || ||||||||    
T  23824676 agctaagctca 23824686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 194
Target Start/End: Complemental strand, 37665853 - 37665743
Alignment:
Q  85 ctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtga 183  Q
    |||| ||||| |||||||||||||||||| |||||||||||||||   ||||| ||| ||  |||||| |||||||||||  |||| | ||||||| |||    
T  37665853 ctagtggctaaagaaattcaccttaaaggcgaataagtggggtgtccggggtttgaaccccggcccctgcatataatatgttttatcctttaccaaatga 37665754  T
Q  184 gataagctcac 194  Q
    | |||||||||    
T  37665753 gttaagctcac 37665743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 46196037 - 46195983
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    ||||||||| ||||||||| |||||||||||||||||||||||  ||||||||||    
T  46196037 gtcaagcagactagcggctggagaaattcaccttaaaggtgaaatagtggggtgt 46195983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 87 - 143
Target Start/End: Original strand, 10624786 - 10624841
Alignment:
Q  87 agcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||  |||||||||||    
T  10624786 agcggctagagaaattcaccttaaa-gtgaataagtgcggtgtttggggttcgaacc 10624841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 12166185 - 12166133
Alignment:
Q  91 gctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||||||||||||||||||| ||||||||||||||||   |||||||||||    
T  12166185 gctagagaaattcaccttaaagatgaataagtggggtgtctggggttcgaacc 12166133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 90 - 193
Target Start/End: Complemental strand, 24030089 - 24029985
Alignment:
Q  90 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtgagataa 188  Q
    ||||||||||||||||||||||| ||||||| ||||||||   ||||||||| ||  ||||||||| ||| | |||||||| ||||| ||| |||| |||    
T  24030089 ggctagagaaattcaccttaaagatgaataaatggggtgtctggggttcgaaccccggcccctacacatattgtgcattatcccttatcaaatgagctaa 24029990  T
Q  189 gctca 193  Q
     ||||    
T  24029989 actca 24029985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 27454131 - 27454011
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcacc-ttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcc 172  Q
    |||||| ||||||| ||||||||||||||||| || ||| ||||||||||||||||    ||||||||||| | ||||| || | | | |||||||| ||    
T  27454131 gtcaagtagcctagtggctagagaaattcaccttttaagatgaataagtggggtgtccgaggttcgaacctcgacccctgcacaaattgtgcattatccc 27454032  T
Q  173 ttaccaagtgagataagctca 193  Q
    ||||||| |||| ||||||||    
T  27454031 ttaccaaatgagctaagctca 27454011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 85 - 129
Target Start/End: Complemental strand, 43440798 - 43440754
Alignment:
Q  85 ctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||    
T  43440798 ctagtggctagagaaattcaccttaaagatgaataagtggggtgt 43440754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 92 - 144
Target Start/End: Original strand, 47324476 - 47324528
Alignment:
Q  92 ctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct 144  Q
    ||||||||||||||||||||||||| |||||||||||| |  |||||||||||    
T  47324476 ctagagaaattcaccttaaaggtgattaagtggggtgtcagaggttcgaacct 47324528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 48258167 - 48258227
Alignment:
Q  82 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac 142  Q
    ||||||||||||||| |||||||| |||||||||||||| ||||||||   ||||||||||    
T  48258167 agcctagcggctagacaaattcactttaaaggtgaataaatggggtgtccggggttcgaac 48258227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 48525681 - 48525586
Alignment:
Q  90 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtgag 184  Q
    ||||||||||||  | |||||||||||||||||| |||||   |||||||||||    ||||| ||||||||||||||| | ||||||||||||||    
T  48525681 ggctagagaaatctaacttaaaggtgaataagtgaggtgtccggggttcgaaccccaacccctgcatataatatgcattgtcccttaccaagtgag 48525586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 13295351 - 13295393
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaa 117  Q
    |||||| |||||||||||| |||||||||||||||||||||||    
T  13295351 gtcaagtagcctagcggctggagaaattcaccttaaaggtgaa 13295393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 144
Target Start/End: Original strand, 25775608 - 25775658
Alignment:
Q  94 agagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct 144  Q
    ||||||||||||||||||| |||||||||||||||||  | ||||||||||    
T  25775608 agagaaattcaccttaaagatgaataagtggggtgtttggagttcgaacct 25775658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 174
Target Start/End: Complemental strand, 40011813 - 40011731
Alignment:
Q  93 tagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcctt 174  Q
    ||||||||||||| ||||| || |||||||||| ||||  |||||||||||| | ||||| ||||||||||| ||||| ||||    
T  40011813 tagagaaattcactttaaaagtaaataagtgggatgttcggggttcgaacctcgacccctgcatataatatgtattatccctt 40011731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 20013691 - 20013650
Alignment:
Q  84 cctagcggctagagaaattcaccttaaaggtgaataagtggg 125  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  20013691 cctagcggctagagaaattcatcttaaaggtggataagtggg 20013650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 191
Target Start/End: Complemental strand, 32376547 - 32376442
Alignment:
Q  86 tagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattccttaccaagtgaga 185  Q
    ||||||||| ||||||||||||||||| ||||||| ||||||||    | ||| |||||    ||| ||||||||||||||| | ||||||||||| ||     
T  32376547 tagcggctaaagaaattcaccttaaagttgaataaatggggtgtccgagattcaaacctcattcctgcatataatatgcattgtcccttaccaagtaagc 32376448  T
Q  186 taagct 191  Q
    ||||||    
T  32376447 taagct 32376442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 129
Target Start/End: Complemental strand, 48619913 - 48619861
Alignment:
Q  77 caagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||| ||| ||| ||||||||||||||||||||||| ||||||||||| ||||    
T  48619913 caagtagcttagtggctagagaaattcaccttaaagatgaataagtggagtgt 48619861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 93 - 193
Target Start/End: Original strand, 3889794 - 3889896
Alignment:
Q  93 tagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg--cccctacatataatatgcattattccttaccaagtgagataagc 190  Q
    |||||||||||||||| ||| ||||||||||||||||   ||||||||||| ||  ||||| |||||| | | |||||| ||||  ||| |||| |||||    
T  3889794 tagagaaattcacctttaagatgaataagtggggtgtccggggttcgaaccctggccccctgcatatattgtacattatcccttgtcaaatgagctaagc 3889893  T
Q  191 tca 193  Q
    |||    
T  3889894 tca 3889896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 129
Target Start/End: Complemental strand, 24575258 - 24575215
Alignment:
Q  86 tagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||||| |||||||||||| ||||||||||||||||| ||||||    
T  24575258 tagcggttagagaaattcatcttaaaggtgaataagtagggtgt 24575215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 94 - 184
Target Start/End: Original strand, 25770037 - 25770128
Alignment:
Q  94 agagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataatatgcattattccttaccaagtgag 184  Q
    |||||||||||| |||||| |||||||||||||||||  | ||||||||||  |  | |||||||| ||| |||||| | ||||||||||||    
T  25770037 agagaaattcactttaaagatgaataagtggggtgtttggagttcgaacctcggttcttacatatattatacattatcctttaccaagtgag 25770128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 130
Target Start/End: Original strand, 35307926 - 35307965
Alignment:
Q  92 ctagagaaattcaccttaaaggtgaat-aagtggggtgtt 130  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  35307926 ctagagaaattcaccttaaaggtgaataaagtggggtgtt 35307965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 86 - 129
Target Start/End: Original strand, 36977228 - 36977271
Alignment:
Q  86 tagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    ||||||||||||||| ||||||||||||||||||| | ||||||    
T  36977228 tagcggctagagaaactcaccttaaaggtgaataaatagggtgt 36977271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 143
Target Start/End: Original strand, 42841774 - 42841825
Alignment:
Q  92 ctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    ||||||||||||||||| ||| ||||||||||||||||   |||||||||||    
T  42841774 ctagagaaattcacctttaagatgaataagtggggtgtctggggttcgaacc 42841825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 229
Target Start/End: Original strand, 16366600 - 16366630
Alignment:
Q  199 actccatttattttgtcaaatggagaggatc 229  Q
    |||||||||||||||||||||||||||||||    
T  16366600 actccatttattttgtcaaatggagaggatc 16366630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 193
Target Start/End: Original strand, 33248799 - 33248897
Alignment:
Q  96 agaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtgagataagctca 193  Q
    ||||||||||||||||| ||||||||| ||||||   |||||||||||  | || || |||||| | ||||| || ||||||||| |||| ||||||||    
T  33248799 agaaattcaccttaaagatgaataagtagggtgtccggggttcgaaccccgacctctgcatatattgtgcatcatcccttaccaaatgagctaagctca 33248897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 38378338 - 38378284
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||||| ||| ||| || |||||||||||||||||||  ||||||||||||||||    
T  38378338 gtcaagtagcttagtgggtagagaaattcaccttaaaaatgaataagtggggtgt 38378284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 229
Target Start/End: Original strand, 44648046 - 44648076
Alignment:
Q  199 actccatttattttgtcaaatggagaggatc 229  Q
    |||||||||||||||||||||||||||||||    
T  44648046 actccatttattttgtcaaatggagaggatc 44648076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 229
Target Start/End: Original strand, 4888550 - 4888579
Alignment:
Q  200 ctccatttattttgtcaaatggagaggatc 229  Q
    ||||||||||||||||||||||||||||||    
T  4888550 ctccatttattttgtcaaatggagaggatc 4888579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 26455982 - 26456035
Alignment:
Q  76 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    ||||| || |||| ||||||||||||||||||| ||||||||||| ||| ||||    
T  26455982 tcaagtagtctagtggctagagaaattcacctttaaggtgaataactggagtgt 26456035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 33342795 - 33342840
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataa 120  Q
    |||||| || ||||||||||||||||||||||||||  ||||||||    
T  33342795 gtcaagtagtctagcggctagagaaattcaccttaacagtgaataa 33342840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 46716429 - 46716384
Alignment:
Q  99 aattcacctta-aaggtgaataagtggggtgttaagggttcgaacc 143  Q
    ||||||||||| ||||| ||||||||||||||| ||||||||||||    
T  46716429 aattcaccttataaggtaaataagtggggtgttcagggttcgaacc 46716384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 3961384 - 3961452
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||| |||||||  |||||||||||||||||| ||  |||||||||||| |||   |||||||||||    
T  3961384 gtcaagtagcctagtagctagagaaattcacctttaaaatgaataagtgggatgtccggggttcgaacc 3961452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 22156216 - 22156148
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||| || |||| || |||||||||||| |||| || ||||||||||||||||  || |||||||||    
T  22156216 gtcaagtagtctagtggttagagaaattcatcttatagatgaataagtggggtgtccagcgttcgaacc 22156148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 22212131 - 22212063
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||| || |||| || |||||||||||| |||| || ||||||||||||||||  || |||||||||    
T  22212131 gtcaagtagtctagtggttagagaaattcatcttatagatgaataagtggggtgtccagcgttcgaacc 22212063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 22965957 - 22966021
Alignment:
Q  99 aattcacctta-aaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataata 161  Q
    ||||||||||| ||||||||||||||||||||   ||||||||||||  |||||| |||||||||    
T  22965957 aattcaccttataaggtgaataagtggggtgtctggggttcgaacctcggcccctgcatataata 22966021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 46266787 - 46266719
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||| || |||| || |||| ||||||||||| ||| |||||||||||| |||| | ||||||||||    
T  46266787 gtcaagtagtctagtggttagataaattcacctttaagatgaataagtgggatgttcaaggttcgaacc 46266719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 75 - 195
Target Start/End: Original strand, 15680877 - 15680998
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 173  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||||||    ||||||||  ||| || |  |||||| ||||||||||||||    
T  15680877 gtcaagtagcctagcggttagagaaattcaccttaaaggtgaataagtggggtgtccgaggttcgaattttgaccaccgcatatattatgcattattcct 15680976  T
Q  174 taccaagtgagataagctcaca 195  Q
    ||||||||||| |||| |||||    
T  15680977 taccaagtgagctaaggtcaca 15680998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 87 - 195
Target Start/End: Complemental strand, 34729578 - 34729468
Alignment:
Q  87 agcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtgaga 185  Q
    ||||| |||||||||||||||||||||||||||||||||||| |  |||||||||||  | ||||| ||||||||||||||||| |||||||||||||||    
T  34729578 agcggttagagaaattcaccttaaaggtgaataagtggggtg-tccgggttcgaaccccgacccctgcatataatatgcattatcccttaccaagtgaga 34729480  T
Q  186 --taagctcaca 195  Q
      ||||||||||    
T  34729479 gctaagctcaca 34729468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 31250266 - 31250147
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||   ||||||||| ||  |||||| || ||| | |||||||| |||    
T  31250266 gtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatccct 31250167  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  31250166 taccaaatgagctaagctca 31250147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 75 - 195
Target Start/End: Complemental strand, 20191560 - 20191440
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 173  Q
    |||||| || |||| ||| ||||||||| ||||||||||||||||||||| ||||   |||||||||||  | ||||| ||||||| ||||||||| |||    
T  20191560 gtcaagtagtctagtggccagagaaatttaccttaaaggtgaataagtggagtgtccggggttcgaaccccgacccctgcatataa-atgcattatccct 20191462  T
Q  174 taccaagtgagataagctcaca 195  Q
    ||||||||||| ||||||||||    
T  20191461 taccaagtgagttaagctcaca 20191440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 43227986 - 43227866
Alignment:
Q  75 gtcaagcagcct-agcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcc 172  Q
    |||||||||||| || ||||||||||||||||||||||| ||||||||||||||||   ||||||||| ||  |||||| || ||| | |||||||| ||    
T  43227986 gtcaagcagccttagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatccc 43227887  T
Q  173 ttaccaagtgagataagctca 193  Q
    ||||||| |||| ||||||||    
T  43227886 ttaccaaatgagctaagctca 43227866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 90 - 193
Target Start/End: Original strand, 38503248 - 38503352
Alignment:
Q  90 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtgagataa 188  Q
    ||||||||||||||||||||||| ||||||||||||||||   ||||||||| ||  |||||| || ||| | |||||||| ||||||||| |||| |||    
T  38503248 ggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatcccttaccaaatgagctaa 38503347  T
Q  189 gctca 193  Q
    |||||    
T  38503348 gctca 38503352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 77 - 120
Target Start/End: Original strand, 12256474 - 12256517
Alignment:
Q  77 caagcagcctagcggctagagaaattcaccttaaaggtgaataa 120  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  12256474 caagtagcctagcggctagagaaattcaccttaaaggtgaataa 12256517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 42209035 - 42208917
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattcctt 174  Q
    |||||| ||||||| | ||||||||||||||||||||| |||||||||| |||||   | |||||||||| | |||| || ||| | || ||||| ||||    
T  42209035 gtcaagtagcctagtgactagagaaattcaccttaaagatgaataagtgaggtgtccggagttcgaacctcggccctgcacatattgtgtattatccctt 42208936  T
Q  175 accaagtgagataagctca 193  Q
    || || |||| ||||||||    
T  42208935 actaaatgagctaagctca 42208917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 4395842 - 4395894
Alignment:
Q  90 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac 142  Q
    ||||||||||||||||||||||| ||||||| |||||||| | ||||||||||    
T  4395842 ggctagagaaattcaccttaaagatgaataaatggggtgtcaggggttcgaac 4395894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 17077480 - 17077361
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| ||||||| ||||||| ||||||||||| ||| ||||||||||||||||   ||||||||| ||   ||||| || | | | |||||||| |||    
T  17077480 gtcaagtagcctagtggctagataaattcacctttaagatgaataagtggggtgtccggggttcgaatcccgacccctgcacaaattgtgcattatccct 17077381  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  17077380 taccaaatgagctaagctca 17077361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 5039799 - 5039745
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||||| || |||| ||||||||||||| ||||||||| ||||||||||||||||    
T  5039799 gtcaagtagtctagtggctagagaaatttaccttaaagatgaataagtggggtgt 5039745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 121
Target Start/End: Original strand, 33545363 - 33545409
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataag 121  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||    
T  33545363 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataag 33545409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 191
Target Start/End: Complemental strand, 5263288 - 5263171
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataatatgcattattcct 173  Q
    |||||| ||||||| ||||||||||||||| ||||||| ||||||| || |||||   |||||||||| |   |||||||| ||| | |||||||| | |    
T  5263288 gtcaagtagcctagtggctagagaaattcagcttaaagatgaataaatgtggtgtctcgggttcgaacatcaccccctacacatattgtgcattatccat 5263189  T
Q  174 taccaagtgagataagct 191  Q
    |||||| |||| ||||||    
T  5263188 taccaaatgagctaagct 5263171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 35168632 - 35168677
Alignment:
Q  99 aattcaccttaaaggtgaataagtggggtgttaagggttcgaacct 144  Q
    |||||||||||||||||||||||||||||||   ||||||||||||    
T  35168632 aattcaccttaaaggtgaataagtggggtgtccggggttcgaacct 35168677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 193
Target Start/End: Original strand, 15470612 - 15470716
Alignment:
Q  90 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataatatgcattattccttaccaagtgagataa 188  Q
    ||||||||||||||||||||||| ||||||| ||||||||   ||||||||| ||  |||| | || ||| | |||||||| ||||||||| |||  |||    
T  15470612 ggctagagaaattcaccttaaagatgaataaatggggtgtctggggttcgaatctcagcccttgcacatattgtgcattatcccttaccaaatgaattaa 15470711  T
Q  189 gctca 193  Q
    |||||    
T  15470712 gctca 15470716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 143
Target Start/End: Complemental strand, 1572228 - 1572161
Alignment:
Q  76 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    ||||| || |||| ||||||||||||||||||| ||| ||||||||||||| ||   |||||||||||    
T  1572228 tcaagtagtctagtggctagagaaattcacctttaagatgaataagtggggagtccggggttcgaacc 1572161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 193
Target Start/End: Original strand, 1984174 - 1984284
Alignment:
Q  84 cctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtg 182  Q
    ||||| |||||||  |||||||||| ||| |||||||||||| |||  |||||||||| || | |||||||  | | | |||||||| ||||||||| ||    
T  1984174 cctagtggctagaagaattcacctttaagatgaataagtgggatgtctagggttcgaaactcgacccctacgaaaattgtgcattatcccttaccaaatg 1984273  T
Q  183 agataagctca 193  Q
    || ||||||||    
T  1984274 agttaagctca 1984284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 5048751 - 5048701
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggg 125  Q
    ||||||||| |||| ||||| ||||||||||||||||| | ||||||||||    
T  5048751 gtcaagcagtctagtggctaaagaaattcaccttaaagataaataagtggg 5048701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 5156993 - 5156940
Alignment:
Q  99 aattcacctta-aaggtgaataagtggggtgttaagggttcgaaccttgcccct 151  Q
    ||||||||||| ||||||||||||| ||||||  ||||||||||||||| ||||    
T  5156993 aattcaccttataaggtgaataagtagggtgtctagggttcgaaccttgaccct 5156940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 10508677 - 10508612
Alignment:
Q  98 aaattcacctta-aaggtgaataagtggggtgttaagggttcgaacc-ttgcccctacatataata 161  Q
    |||||||||||| ||||||||||||||||||||  ||| |||||||| | |||||| |||||||||    
T  10508677 aaattcaccttataaggtgaataagtggggtgtccaggtttcgaaccgtggcccctgcatataata 10508612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 98 - 161
Target Start/End: Original strand, 15978675 - 15978740
Alignment:
Q  98 aaattcacctta-aaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataata 161  Q
    |||||||||||| |||||||||||||||||||||  |||||| |||||   |||||||||||||||    
T  15978675 aaattcaccttataaggtgaataagtggggtgtttggggttcaaacctcatcccctacatataata 15978740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 18478099 - 18478054
Alignment:
Q  99 aattcacctta-aaggtgaataagtggggtgttaagggttcgaacc 143  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||||    
T  18478099 aattcaccttataaggtgaataagtggggtgtccagggttcgaacc 18478054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 19059003 - 19059048
Alignment:
Q  99 aattcacctta-aaggtgaataagtggggtgttaagggttcgaacc 143  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||||    
T  19059003 aattcaccttataaggtgaataagtggggtgtccagggttcgaacc 19059048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 20762377 - 20762332
Alignment:
Q  99 aattcacctta-aaggtgaataagtggggtgttaagggttcgaacc 143  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||||    
T  20762377 aattcaccttataaggtgaataagtggggtgtccagggttcgaacc 20762332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 32158413 - 32158458
Alignment:
Q  99 aattcacctta-aaggtgaataagtggggtgttaagggttcgaacc 143  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||    
T  32158413 aattcaccttataaggtgaataagtggggtgttcggggttcgaacc 32158458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 129
Target Start/End: Complemental strand, 38436017 - 38435984
Alignment:
Q  96 agaaattcaccttaaaggtgaataagtggggtgt 129  Q
    ||||||||||||||||||||||||||| ||||||    
T  38436017 agaaattcaccttaaaggtgaataagtagggtgt 38435984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 1244726 - 1244790
Alignment:
Q  99 aattcacctta-aaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataata 161  Q
    ||||||||||| ||||||||||||||||||||   ||||||||||| || ||||| |||||||||    
T  1244726 aattcaccttataaggtgaataagtggggtgtctggggttcgaaccctgacccctgcatataata 1244790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 18872615 - 18872572
Alignment:
Q  99 aattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||||||||| |||||||||||||||||||  |||||||||||    
T  18872615 aattcaccttaa-ggtgaataagtggggtgttcggggttcgaacc 18872572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 24205529 - 24205470
Alignment:
Q  99 aattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataa 159  Q
    |||||||||||| ||| ||||||||||||||   ||||||||||||  |||||||||||||    
T  24205529 aattcaccttaa-ggtaaataagtggggtgtccggggttcgaacctgacccctacatataa 24205470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 227
Target Start/End: Original strand, 39902497 - 39902525
Alignment:
Q  199 actccatttattttgtcaaatggagagga 227  Q
    |||||||||||||||||||||||||||||    
T  39902497 actccatttattttgtcaaatggagagga 39902525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 8e-24; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 75 - 194
Target Start/End: Complemental strand, 24202269 - 24202149
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    ||||||||||||||||||| |||||||||||||||||||||||  ||||||||||   ||||||||| ||  |||||| |||| |  ||||||||| |||    
T  24202269 gtcaagcagcctagcggctggagaaattcaccttaaaggtgaaatagtggggtgtccggggttcgaaccccggcccctgcatacataatgcattatccct 24202170  T
Q  174 taccaagtgagataagctcac 194  Q
    ||||||||||| |||||||||    
T  24202169 taccaagtgagctaagctcac 24202149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 184
Target Start/End: Complemental strand, 42541274 - 42541165
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||| ||  |||||| |||| ||||| |||||| |||    
T  42541274 gtcaagtagcctagcggctagagaaattcaccttaaaggtgagtaagtggggtgtctggggttcgaaccccagcccctgcata-aatatccattatccct 42541176  T
Q  174 taccaagtgag 184  Q
    |||||||||||    
T  42541175 taccaagtgag 42541165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 37886219 - 37886305
Alignment:
Q  93 tagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaa 179  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||| ||| || ||||||||||| ||||||||| |||||||||    
T  37886219 tagagaaattcaccttaaaggtgaataagtggggtgtccagggttcgaaccctagctcctacatataa-atgcattatcccttaccaa 37886305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 95 - 193
Target Start/End: Complemental strand, 43684377 - 43684279
Alignment:
Q  95 gagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataatatgcattattccttaccaagtgagataagctca 193  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||  |||||| |||| || ||||||||| ||||||||| |||| ||||||||    
T  43684377 gagaaattcaccttaaaggtgaataagtggggtgttcggggttcgaacctcagcccctgcatacaa-atgcattatcccttaccaaatgagctaagctca 43684279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 189
Target Start/End: Complemental strand, 1962944 - 1962830
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 173  Q
    |||||| ||||||||| |||||||| |||||||||||| ||||||||||||||||   | |||||||||| | ||||| |||| |||||||||||| | |    
T  1962944 gtcaagtagcctagcgactagagaa-ttcaccttaaagatgaataagtggggtgtccggagttcgaacctcgacccctgcatacaatatgcattatcctt 1962846  T
Q  174 taccaagtgagataag 189  Q
    ||||||||||| ||||    
T  1962845 taccaagtgagttaag 1962830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 34107613 - 34107495
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 173  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||||||||| |  ||||| ||||| || ||||| || ||| | |||||||| |||    
T  34107613 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtg-tccgggtttgaaccctgacccctgcacatattgtgcattatccct 34107515  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  34107514 taccaaatgagctaagctca 34107495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 194
Target Start/End: Original strand, 25783205 - 25783309
Alignment:
Q  90 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtgagataa 188  Q
    |||||||||| |||||||| ||| ||||||||||||||||  |||||||||| |||  ||||| ||||| ||||||||||| ||| |||||||||| |||    
T  25783205 ggctagagaacttcaccttgaagatgaataagtggggtgtccagggttcgaaccctaacccctgcatat-atatgcattatccctcaccaagtgagctaa 25783303  T
Q  189 gctcac 194  Q
    ||||||    
T  25783304 gctcac 25783309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 33065233 - 33065352
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 173  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||| |||||||  | |||||||||  | |||||||| | | | |||||||| |||    
T  33065233 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtagggtgttcggagttcgaaccccgacccctacacacattgtgcattatccct 33065332  T
Q  174 taccaagtgagataagctca 193  Q
    | |||| |||| ||||||||    
T  33065333 tgccaaatgagctaagctca 33065352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 142
Target Start/End: Original strand, 37592198 - 37592265
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac 142  Q
    |||||| || |||||||||||||||||||||||||||||| ||||||||||||||   ||||||||||    
T  37592198 gtcaagtagtctagcggctagagaaattcaccttaaaggtaaataagtggggtgtctggggttcgaac 37592265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 41541516 - 41541570
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||||| ||||||||||| |||||||||||||||||| |||||||||||||||||    
T  41541516 gtcaagtagcctagcggccagagaaattcaccttaaaagtgaataagtggggtgt 41541570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 43027274 - 43027205
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct 144  Q
    |||||| || |||| ||||||||||||||||||||||||||||||| ||||||||   ||||||||||||    
T  43027274 gtcaagtagtctagtggctagagaaattcaccttaaaggtgaataaatggggtgtctggggttcgaacct 43027205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 142
Target Start/End: Complemental strand, 29090534 - 29090467
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac 142  Q
    |||||| |||||||||||| |||||||||||||||||| |||||||||| |||||   ||||||||||    
T  29090534 gtcaagtagcctagcggctggagaaattcaccttaaagatgaataagtgaggtgtccggggttcgaac 29090467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 41750065 - 41750015
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggg 125  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||||||    
T  41750065 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggg 41750015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 75 - 125
Target Start/End: Complemental strand, 42998754 - 42998704
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggg 125  Q
    |||||| ||||||||||||||||||||||||||||||||| |||| |||||    
T  42998754 gtcaagtagcctagcggctagagaaattcaccttaaaggtaaatatgtggg 42998704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 143
Target Start/End: Original strand, 19843346 - 19843407
Alignment:
Q  82 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||||  |||||||||||||||||||||| |||||||||| |||||  ||||||||||||    
T  19843346 agcctagtagctagagaaattcaccttaaagatgaataagtgaggtgtctagggttcgaacc 19843407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 175
Target Start/End: Original strand, 33613597 - 33613682
Alignment:
Q  91 gctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccct-acatataatatgcattattcctta 175  Q
    |||||||||||||| ||||||||||||||||||||||||   ||||||||||   | ||||  ||||||||||||||||| |||||    
T  33613597 gctagagaaattcaacttaaaggtgaataagtggggtgtccggggttcgaactccgaccctcgcatataatatgcattatccctta 33613682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 194
Target Start/End: Complemental strand, 20435899 - 20435780
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| |||||||||  |||||||||||||||||||| |||||||||||| |||    |||||||| ||  | || | |||| |||||||| ||| |||    
T  20435899 gtcaagtagcctagcga-tagagaaattcaccttaaagatgaataagtgggatgtccgaggttcgaaccccgggccttgcataaaatatgcaatatccct 20435801  T
Q  174 taccaagtgagataagctcac 194  Q
    ||||||||||| |||||||||    
T  20435800 taccaagtgagctaagctcac 20435780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 194
Target Start/End: Complemental strand, 5207117 - 5206998
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattcctt 174  Q
    |||||| ||||||||| ||||| |||||||  ||||| || ||||||||||||||    ||||||||| |  ||||| ||||||| |||||||||   ||    
T  5207117 gtcaagtagcctagcgactagaaaaattcattttaaaagtaaataagtggggtgtccgaggttcgaacatgacccctgcatataaaatgcattatctatt 5207018  T
Q  175 accaagtgagataagctcac 194  Q
    ||||| |||| |||||||||    
T  5207017 accaaatgagttaagctcac 5206998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 194
Target Start/End: Complemental strand, 9564651 - 9564537
Alignment:
Q  82 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac--cttgcccctacatataatatgcattattccttaccaa 179  Q
    |||||| || |||||||||||||| ||||||||||||||||| |||||  ||||| |||||  |   ||| |||||||| ||| ||||||  ||||||||    
T  9564651 agcctaacgactagagaaattcactttaaaggtgaataagtgaggtgtccagggtacgaaccacaaccccttacatatattatacattatctcttaccaa 9564552  T
Q  180 gtgagataagctcac 194  Q
    | ||| |||||||||    
T  9564551 gcgagctaagctcac 9564537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 125
Target Start/End: Original strand, 18424135 - 18424178
Alignment:
Q  82 agcctagcggctagagaaattcaccttaaaggtgaataagtggg 125  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||    
T  18424135 agcctagtggctagagaaattcaccttaaagatgaataagtggg 18424178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 5207211 - 5207157
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||||| || |||| ||||| ||||||||| ||||||||||||||||||||||||    
T  5207211 gtcaagtagtctagtggctaaagaaattcatcttaaaggtgaataagtggggtgt 5207157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 20375694 - 20375592
Alignment:
Q  93 tagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtgagataagct 191  Q
    |||||||||||||||||||| ||||||||||| ||||    |||||||| ||  | |||| |||| |||| ||| ||| |||||||||||||| ||||||    
T  20375694 tagagaaattcaccttaaagatgaataagtggcgtgtctgaggttcgaaccccggaccctgcataaaataggcaatatcccttaccaagtgagctaagct 20375595  T
Q  192 cac 194  Q
    |||    
T  20375594 cac 20375592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 31149078 - 31149196
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattcctt 174  Q
    |||||| |||| || || |||||||||||||||||||| | || |||||||||||   ||||||||||||   |||| || ||| | |||||||| ||||    
T  31149078 gtcaagtagccaagtggttagagaaattcaccttaaagattaaaaagtggggtgtctggggttcgaacctcaaccctgcacatattgtgcattatccctt 31149177  T
Q  175 accaagtgagataagctca 193  Q
    ||||| |||| || |||||    
T  31149178 accaaatgagctatgctca 31149196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 3330195 - 3330244
Alignment:
Q  93 tagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac 142  Q
    |||||||||||||||||||| ||||||||||||||||   ||||||||||    
T  3330195 tagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaac 3330244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 129
Target Start/End: Original strand, 5901808 - 5901861
Alignment:
Q  76 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    ||||| ||||||| ||||| ||||||||||||| ||| ||||||||||||||||    
T  5901808 tcaagtagcctagtggctaaagaaattcacctttaagatgaataagtggggtgt 5901861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 142
Target Start/End: Original strand, 42678318 - 42678367
Alignment:
Q  93 tagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac 142  Q
    |||||||||||||||||||| ||||||||||||||||   ||||||||||    
T  42678318 tagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaac 42678367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 193
Target Start/End: Complemental strand, 17270016 - 17269912
Alignment:
Q  90 ggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtgagataa 188  Q
    ||||||||||||||||||| | | ||||||||| ||||||| || ||||||| ||   |||||||||| | | ||||||||||  |||||| |||| |||    
T  17270016 ggctagagaaattcacctttatgatgaataagttgggtgttcagcgttcgaatcccgacccctacataaattgtgcattattctctaccaaatgagctaa 17269917  T
Q  189 gctca 193  Q
    |||||    
T  17269916 gctca 17269912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 18949661 - 18949728
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||| || |||| |||||||||||||||| |||||  ||||||||| ||||||| ||||||||||||    
T  18949661 gtcaagtagtctagtggctagagaaattcacattaaaa-tgaataagttgggtgttcagggttcgaacc 18949728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 184
Target Start/End: Original strand, 31594380 - 31594452
Alignment:
Q  113 gtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtgag 184  Q
    |||||||| |||||||||  || ||||||| | | |||||||||||| |||||||||||||||||||| ||||    
T  31594380 gtgaataaatggggtgtttgggattcgaacttcgacccctacatatattatgcattattccttaccaaatgag 31594452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 193
Target Start/End: Complemental strand, 32084956 - 32084845
Alignment:
Q  76 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcctt 174  Q
    ||||| ||||||| ||||||| |||||||||||||       |||||| | ||||  |||||||||||  | ||||||||||||||||||||| | ||||    
T  32084956 tcaagtagcctagtggctagaaaaattcaccttaa-------taagtgagatgttcggggttcgaaccccggcccctacatataatatgcattgtccctt 32084864  T
Q  175 accaagtgagataagctca 193  Q
    ||||| |||| ||||||||    
T  32084863 accaaatgagctaagctca 32084845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 141
Target Start/End: Original strand, 35710165 - 35710213
Alignment:
Q  93 tagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa 141  Q
    |||||||||||||||||||| |||||||||||| ||||  |||||||||    
T  35710165 tagagaaattcaccttaaagatgaataagtgggatgtttggggttcgaa 35710213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 194
Target Start/End: Complemental strand, 36755741 - 36755621
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattcct 173  Q
    |||||| ||||||||| |  |||||| ||||||||||||||||  ||| ||||||   |||||| ||||  | |||||| |||||  || |||||| |||    
T  36755741 gtcaagtagcctagcgaccggagaaagtcaccttaaaggtgaaatagttgggtgtccggggttcaaaccccgacccctatatatataatccattatccct 36755642  T
Q  174 taccaagtgagataagctcac 194  Q
    ||||||||||| |||||||||    
T  36755641 taccaagtgagttaagctcac 36755621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 121
Target Start/End: Original strand, 10745487 - 10745526
Alignment:
Q  82 agcctagcggctagagaaattcaccttaaaggtgaataag 121  Q
    |||||||||| |||| ||||||||||||||||||||||||    
T  10745487 agcctagcggttagataaattcaccttaaaggtgaataag 10745526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 17543066 - 17543120
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||||| ||||||| || |||||||| |||| |||||| ||||||||||||||||    
T  17543066 gtcaagtagcctagtggttagagaaagtcacattaaagatgaataagtggggtgt 17543120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 179
Target Start/End: Complemental strand, 24374277 - 24374216
Alignment:
Q  117 ataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattccttaccaa 179  Q
    |||||||||||||| ||| ||||||||  | |||||||||||||||||| || ||||||||||    
T  24374277 ataagtggggtgttcaggattcgaaccacgaccctacatataatatgcaata-tccttaccaa 24374216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 229
Target Start/End: Complemental strand, 32009968 - 32009938
Alignment:
Q  199 actccatttattttgtcaaatggagaggatc 229  Q
    |||||||||||||||||||||||||||||||    
T  32009968 actccatttattttgtcaaatggagaggatc 32009938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 232
Target Start/End: Complemental strand, 30857672 - 30857639
Alignment:
Q  199 actccatttattttgtcaaatggagaggatccta 232  Q
    |||||||||||||||| |||||||||||||||||    
T  30857672 actccatttattttgtgaaatggagaggatccta 30857639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 189
Target Start/End: Original strand, 33482636 - 33482733
Alignment:
Q  93 tagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc-ttgcccctacatataatatgcattattccttaccaagtgagataag 189  Q
    |||||||||||| ||||||| ||||||||||||||||    ||||||||||   | |||| |||||| | ||||| |||||||||||| |||| ||||    
T  33482636 tagagaaattcatcttaaagatgaataagtggggtgtctgaggttcgaaccacggtccctgcatatattgtgcatcattccttaccaaatgagctaag 33482733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 8234791 - 8234855
Alignment:
Q  99 aattcacctta-aaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataata 161  Q
    ||||||||||| ||||||||||||||||||||   ||||||||| ||  ||||||||||||||||    
T  8234791 aattcaccttataaggtgaataagtggggtgtccggggttcgaaccccggcccctacatataata 8234855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 195
Target Start/End: Complemental strand, 10699902 - 10699782
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattcctt 174  Q
    |||||| |||| | ||||| ||| ||||||  ||||||||| |||| || ||| ||  || |||||||||  ||||||||||||| ||  ||||| ||||    
T  10699902 gtcaagtagcccaacggcttgagtaattcattttaaaggtggataaatgaggtattcgggattcgaacctgacccctacatataacatatattatccctt 10699803  T
Q  175 accaagtgagataagctcaca 195  Q
    |  ||||||| ||||||||||    
T  10699802 attaagtgagctaagctcaca 10699782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 17376437 - 17376497
Alignment:
Q  82 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac 142  Q
    |||||||||| |||||||||||||||||||  | ||||| | |||||||  ||||||||||    
T  17376437 agcctagcggttagagaaattcaccttaaaaataaataaatagggtgttcggggttcgaac 17376497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 30474194 - 30474258
Alignment:
Q  99 aattcacctta-aaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataata 161  Q
    ||||||||||| ||||||||||||||||||||   ||||||||||||  |||||| |||||||||    
T  30474194 aattcaccttataaggtgaataagtggggtgtctggggttcgaacctcggcccctgcatataata 30474258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 189
Target Start/End: Complemental strand, 7164812 - 7164699
Alignment:
Q  76 tcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattcctt 174  Q
    ||||| || |||||||||||||||||||||||||||||||||||||||||||| |  |||||||||| |  |||||||||||||| ||||||||| ||||    
T  7164812 tcaagtagtctagcggctagagaaattcaccttaaaggtgaataagtggggtggtcggggttcgaactccggcccctacatataa-atgcattatccctt 7164714  T
Q  175 accaagtgagataag 189  Q
    | ||| |||| ||||    
T  7164713 atcaaatgagctaag 7164699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 75 - 190
Target Start/End: Original strand, 5641666 - 5641781
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattcctt 174  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||||   | |||||||||  |  ||| |||| | |||||||||| | ||    
T  5641666 gtcaagtagtctagcggctagagaaattcaccttaaaggtgaataagtggggtgtccggagttcgaaccccggtcctgcataaattatgcattatccatt 5641765  T
Q  175 accaagtgagataagc 190  Q
    |||||||||| |||||    
T  5641766 accaagtgagttaagc 5641781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 6228236 - 6228355
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||   ||||||||| ||  |||||| || ||| | |||||||| |||    
T  6228236 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgtgcattatccct 6228335  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  6228336 taccaaatgagctaagctca 6228355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 17217077 - 17216958
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattcct 173  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||   | |||||||| |   |||||||| ||| |||||||||| |||    
T  17217077 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggagttcgaactccgacccctacacatattatgcattatccct 17216978  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  17216977 taccaaatgagctaagctca 17216958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 75 - 193
Target Start/End: Original strand, 20415538 - 20415657
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||   ||||||||| ||| |||||| || ||| | |||||||| |||    
T  20415538 gtcaagcagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccctggcccctgcacatattgtgcattatccct 20415637  T
Q  174 taccaagtgagataagctca 193  Q
    ||| || |||| ||| ||||    
T  20415638 tacaaaatgagctaaactca 20415657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 75 - 179
Target Start/End: Original strand, 35065466 - 35065570
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataatatgcattattcctt 174  Q
    |||||||||| |||||||||||||||||||| ||||| |||||||||| | ||||    ||||||||||  ||||||||||| | |||||||||| ||||    
T  35065466 gtcaagcagcttagcggctagagaaattcactttaaatgtgaataagtagagtgtccgtggttcgaacccggcccctacataaattatgcattatccctt 35065565  T
Q  175 accaa 179  Q
    |||||    
T  35065566 accaa 35065570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 88 - 193
Target Start/End: Original strand, 8330480 - 8330586
Alignment:
Q  88 gcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattccttaccaagtgagat 186  Q
    ||||||||||||||||||||||||||||||||||||| |||||  || ||||||| |  | |||||||||||||||| ||||| | ||| |||| ||| |    
T  8330480 gcggctagagaaattcaccttaaaggtgaataagtggagtgttttggcttcgaactccggtccctacatataatatgtattatcctttatcaagagagtt 8330579  T
Q  187 aagctca 193  Q
    |||||||    
T  8330580 aagctca 8330586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 5757847 - 5757915
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||| ||||| |||||||||||||||||||||||| ||||||||||| ||||||  |||||||||||    
T  5757847 gtcaagtagcctggcggctagagaaattcaccttaaatgtgaataagtgaggtgttcggggttcgaacc 5757915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 18903343 - 18903411
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||   |||||||||||    
T  18903343 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaacc 18903411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 31703704 - 31703773
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct 144  Q
    |||||| | ||||||||||| ||||||||| |||||| ||||||||||| ||||||| ||||||||||||    
T  31703704 gtcaagtaacctagcggctaaagaaattcatcttaaaagtgaataagtgaggtgttaggggttcgaacct 31703773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 88 - 179
Target Start/End: Complemental strand, 9455945 - 9455854
Alignment:
Q  88 gcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattccttaccaa 179  Q
    ||||||||| ||||||| |||||||||||||||||||||||||  |||||||||| |   |||||||||| || ||||||||| |||||||||    
T  9455945 gcggctagaaaaattcaacttaaaggtgaataagtggggtgtttggggttcgaactccgacccctacatacaa-atgcattatcccttaccaa 9455854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 196
Target Start/End: Original strand, 3338290 - 3338404
Alignment:
Q  82 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacct-tgcccctacatataatatgcattattccttaccaag 180  Q
    ||||||||| ||| |||||||||||||||| |||||||||| ||||||   |||||||||| |  |||||| || | ||||||||||||  |||||||||    
T  3338290 agcctagcgactatagaaattcaccttaaatgtgaataagtagggtgtctggggttcgaacttcagcccctgca-aaaatatgcattatctcttaccaag 3338388  T
Q  181 tgagataagctcacat 196  Q
    |||| ||| |||||||    
T  3338389 tgagctaaactcacat 3338404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 82 - 179
Target Start/End: Original strand, 7954905 - 7955003
Alignment:
Q  82 agcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaa 179  Q
    ||||||| ||||||||||||||| ||||||| |||||||||||| ||||  ||||||| |||| | ||||| || ||| | |||||||| |||||||||    
T  7954905 agcctagtggctagagaaattcatcttaaagatgaataagtgggatgttcggggttcgcacctcgccccctgcacatattgtgcattatcccttaccaa 7955003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 179
Target Start/End: Complemental strand, 32470787 - 32470698
Alignment:
Q  92 ctagagaaattcaccttaaaggtgaataagt-ggggtgttaagggttcgaacct-tgcccctacatataatatgcattattccttaccaa 179  Q
    ||||||||||||||||||||||||||||||| |||||||    ||||| |||||  |||||| |||||| |||||||||||| |||||||    
T  32470787 ctagagaaattcaccttaaaggtgaataagtaggggtgtctgaggttcaaacctcagcccctgcatatattatgcattattctttaccaa 32470698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 1183943 - 1183979
Alignment:
Q  90 ggctagagaaattcaccttaaaggtgaataagtgggg 126  Q
    |||||||||||||||||||||||||||||||||||||    
T  1183943 ggctagagaaattcaccttaaaggtgaataagtgggg 1183979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 11611472 - 11611420
Alignment:
Q  91 gctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    ||||||||||||||| |||||| ||||||||||||||||  ||||||||||||    
T  11611472 gctagagaaattcacattaaagatgaataagtggggtgtccagggttcgaacc 11611420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 9763553 - 9763461
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcatt 167  Q
    |||||| ||| ||| |||||||||||||||||||||| ||||||||||||||| ||  ||||| ||| ||  |||| | |||||||||||||||    
T  9763553 gtcaagtagcatagtggctagagaaattcaccttaaa-gtgaataagtggggttttcggggttggaaccccggcccatgcatataatatgcatt 9763461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 179
Target Start/End: Original strand, 29321952 - 29322057
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| || |||| ||||||||||||||||||||||| | |||||||||| |||   ||||||||| ||  |||||| || ||| | |||||||| |||    
T  29321952 gtcaagtagtctagtggctagagaaattcaccttaaagataaataagtgggatgtctggggttcgaaccccagcccctgcacatattgtgcattatccct 29322051  T
Q  174 taccaa 179  Q
    ||||||    
T  29322052 taccaa 29322057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 143
Target Start/End: Original strand, 4854282 - 4854350
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacc 143  Q
    |||||| || |||| || |||||||||| ||||||||| ||||||||||||||||   |||||||||||    
T  4854282 gtcaagtaggctagtggttagagaaatttaccttaaagatgaataagtggggtgtccggggttcgaacc 4854350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 6371637 - 6371582
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgtt 130  Q
    ||||||||| | | ||| |||||||||| ||||||||||| |||||||||||||||    
T  6371637 gtcaagcagtcaatcggttagagaaatttaccttaaaggttaataagtggggtgtt 6371582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 129
Target Start/End: Original strand, 1194696 - 1194733
Alignment:
Q  91 gctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  1194696 gctagagaaattcaccttaaa-gtgaataagtggggtgt 1194733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 194
Target Start/End: Original strand, 20568252 - 20568352
Alignment:
Q  96 agaaattcaccttaa--aggtgaataagtggggtgttaagggttcgaaccttg-cccctacatataatatgcattattccttaccaagtgagataagctc 192  Q
    ||||||||||||| |  ||||||||||||||||||||  |||||||||||  | ||||| |||||| |||||| |  |||||||||| |||| |||||||    
T  20568252 agaaattcacctttataaggtgaataagtggggtgttcggggttcgaaccccgacccctgcatatattatgcaat-gtccttaccaactgagctaagctc 20568350  T
Q  193 ac 194  Q
    ||    
T  20568351 ac 20568352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 34884133 - 34884187
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgt 129  Q
    |||||| || |||||||||||| ||||| ||||||| |||||||| |||||||||    
T  34884133 gtcaagtagtctagcggctagataaatttaccttaatggtgaatatgtggggtgt 34884187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 3200059 - 3200104
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataa 120  Q
    |||||| ||||||  ||||||||||||||||||||||| |||||||    
T  3200059 gtcaagtagcctattggctagagaaattcaccttaaagatgaataa 3200104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 126
Target Start/End: Complemental strand, 3974542 - 3974509
Alignment:
Q  93 tagagaaattcaccttaaaggtgaataagtgggg 126  Q
    |||||||||||||||||||| |||||||||||||    
T  3974542 tagagaaattcaccttaaagatgaataagtgggg 3974509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 6270608 - 6270653
Alignment:
Q  99 aattcacctta-aaggtgaataagtggggtgttaagggttcgaacc 143  Q
    ||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  6270608 aattcaccttataaggtgaataattggggtgttcagggttcgaacc 6270653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 11552990 - 11552937
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtg 128  Q
    |||||| || |||| ||||||| ||||| ||||||||| |||||||||||||||    
T  11552990 gtcaagtagactagtggctagaaaaatttaccttaaagatgaataagtggggtg 11552937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 193
Target Start/End: Original strand, 24794881 - 24794990
Alignment:
Q  85 ctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtga 183  Q
    |||| ||||||||||||||| ||||||  |||||||||||| |||   ||||||||| ||   ||||| || ||| | |||||||| ||||||||| |||    
T  24794881 ctagtggctagagaaattcatcttaaatatgaataagtgggatgtccggggttcgaatcccaacccctgcacatattgtgcattatcccttaccaaatga 24794980  T
Q  184 gataagctca 193  Q
    | ||||||||    
T  24794981 gctaagctca 24794990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 5948973 - 5948937
Alignment:
Q  92 ctagagaaattcaccttaaaggtgaataagtggggtg 128  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  5948973 ctagagaaattcaccttaaagatgaataagtgaggtg 5948937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 194
Target Start/End: Complemental strand, 7545407 - 7545332
Alignment:
Q  119 aagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattccttaccaagtgagataagctcac 194  Q
    ||||||||||||  ||||||||| ||| |||||| ||||||||||||| || ||| |||||| |||| |||||||||    
T  7545407 aagtggggtgttcggggttcgaaccctggcccctgcatataatatgcaata-tccctaccaactgagctaagctcac 7545332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 165
Target Start/End: Original strand, 16719326 - 16719358
Alignment:
Q  133 gggttcgaaccttgcccctacatataatatgca 165  Q
    ||||||||||||||||||| |||||||||||||    
T  16719326 gggttcgaaccttgcccctgcatataatatgca 16719358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 129
Target Start/End: Complemental strand, 32344736 - 32344704
Alignment:
Q  97 gaaattcaccttaaaggtgaataagtggggtgt 129  Q
    ||||||||| |||||||||||||||||||||||    
T  32344736 gaaattcactttaaaggtgaataagtggggtgt 32344704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 142
Target Start/End: Complemental strand, 35190859 - 35190815
Alignment:
Q  99 aattcacctta-aaggtgaataagtggggtgttaagggttcgaac 142  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||    
T  35190859 aattcaccttataaggtgaataagtggggtgttcggggttcgaac 35190815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 193
Target Start/End: Complemental strand, 419831 - 419712
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaa-ccttgcccctacatataatatgcattattcct 173  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||   ||||||||| ||  |||||| || ||| | | |||||| |||    
T  419831 gtcaagtagcctagtggctagagaaattcaccttaaagatgaataagtggggtgtccggggttcgaaccccggcccctgcacatattgttcattatccct 419732  T
Q  174 taccaagtgagataagctca 193  Q
    |||||| |||| ||||||||    
T  419731 taccaaatgagctaagctca 419712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 85 - 190
Target Start/End: Complemental strand, 22568 - 22462
Alignment:
Q  85 ctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaacctt-gcccctacatataatatgcattattccttaccaagtga 183  Q
    |||||| ||| | ||||||||||||||  |||||||||||| |||   ||||||||||||  |||||||||||||||||| ||||| |||||||||||||    
T  22568 ctagcgactaaaaaaattcaccttaaaaatgaataagtgggatgtctggggttcgaacctcagcccctacatataatatgtattatcccttaccaagtga 22469  T
Q  184 gataagc 190  Q
    | |||||    
T  22468 gctaagc 22462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 91 - 193
Target Start/End: Original strand, 44711 - 44814
Alignment:
Q  91 gctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac-cttgcccctacatataatatgcattattccttaccaagtgagataag 189  Q
    |||||||| ||||||||||||||| ||||||| ||||||| ||||||||||| |   |||| || || | |||||||||||||||||||| |||  ||||    
T  44711 gctagagatattcaccttaaaggtaaataagtagggtgttcagggttcgaactccaacccccacttaaattatgcattattccttaccaaatgaactaag 44810  T
Q  190 ctca 193  Q
    ||||    
T  44811 ctca 44814  T

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Target: scaffold0126 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 110 - 161
Target Start/End: Original strand, 22861 - 22912
Alignment:
Q  110 aaggtgaataagtggggtgttaagggttcgaaccttgcccctacatataata 161  Q
    ||||||||||||||||||||  ||||||||||||  |||||| |||||||||    
T  22861 aaggtgaataagtggggtgtccagggttcgaacccggcccctgcatataata 22912  T

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Target: scaffold0087 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 142
Target Start/End: Original strand, 44331 - 44398
Alignment:
Q  75 gtcaagcagcctagcggctagagaaattcaccttaaaggtgaataagtggggtgttaagggttcgaac 142  Q
    |||||| || || ||||||||| |||||||||||||| || |||||||| ||||||  ||||||||||    
T  44331 gtcaagtagtctggcggctagaaaaattcaccttaaatgtaaataagtgaggtgttcggggttcgaac 44398  T

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Target: scaffold0108 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 123
Target Start/End: Original strand, 18330 - 18370
Alignment:
Q  83 gcctagcggctagagaaattcaccttaaaggtgaataagtg 123  Q
    |||||| ||||||| ||||||||||||||| ||||||||||    
T  18330 gcctagtggctagaaaaattcaccttaaagatgaataagtg 18370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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