View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3482_high_56 (Length: 253)
Name: NF3482_high_56
Description: NF3482
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3482_high_56 |
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Alignment Details
Target: chr8 (Bit Score: 156; Significance: 6e-83; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 26142321 - 26142150
Alignment:
| Q |
1 |
ccatgtgtgccaaccaatattattactatgtgaactaacttaagtatagactaatttaatacttcattactttgaatcctacaataaacaacgcctatag |
100 |
Q |
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| T |
26142321 |
ccatgtgtgccaacccatattattactatgtgaactaacttaagtatagattaatttaatacttcattactttgaatcctacaataaacaacgcctatag |
26142222 |
T |
|
| Q |
101 |
ccatattggcaaagtatgggtcaacatctatatgtaatcattcaaatgtgtaatcttatattgaggtggaat |
172 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
26142221 |
ccatattggcaaagtatgggtcaacacctatatgtaatcattcaaatgtgtaatcttatattcaggtggaat |
26142150 |
T |
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