View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3482_low_46 (Length: 298)

Name: NF3482_low_46
Description: NF3482
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3482_low_46
NF3482_low_46
[»] chr7 (40 HSPs)
chr7 (116-283)||(42925422-42925587)
chr7 (116-283)||(37518045-37518210)
chr7 (116-283)||(9152008-9152168)
chr7 (116-283)||(43737294-43737459)
chr7 (211-283)||(36468412-36468484)
chr7 (116-283)||(42864883-42865049)
chr7 (119-281)||(36629417-36629577)
chr7 (116-186)||(47202794-47202864)
chr7 (118-283)||(19818592-19818754)
chr7 (124-184)||(43186094-43186154)
chr7 (128-283)||(31643253-31643405)
chr7 (116-166)||(26554945-26554995)
chr7 (116-169)||(24041979-24042032)
chr7 (211-283)||(3936320-3936392)
chr7 (116-168)||(6466919-6466971)
chr7 (116-184)||(7115051-7115119)
chr7 (116-168)||(8155224-8155276)
chr7 (116-176)||(48705781-48705841)
chr7 (117-184)||(16278322-16278389)
chr7 (116-175)||(33573830-33573889)
chr7 (118-176)||(3304535-3304593)
chr7 (124-186)||(19225388-19225450)
chr7 (221-283)||(36408583-36408645)
chr7 (211-283)||(26555032-26555104)
chr7 (216-283)||(3304638-3304705)
chr7 (221-283)||(24690218-24690281)
chr7 (116-163)||(28230274-28230321)
chr7 (117-179)||(8214377-8214439)
chr7 (132-182)||(37402771-37402821)
chr7 (214-283)||(33573921-33573990)
chr7 (116-169)||(36468321-36468374)
chr7 (124-177)||(47239508-47239561)
chr7 (124-176)||(1519031-1519083)
chr7 (211-283)||(37398766-37398838)
chr7 (124-159)||(36408697-36408732)
chr7 (221-283)||(1518919-1518981)
chr7 (118-184)||(5731063-5731128)
chr7 (211-272)||(19225473-19225534)
chr7 (221-274)||(48776094-48776147)
chr7 (211-283)||(7115145-7115217)
[»] chr5 (45 HSPs)
chr5 (126-283)||(38372475-38372630)
chr5 (116-283)||(6156905-6157070)
chr5 (118-283)||(31221123-31221286)
chr5 (116-283)||(14112039-14112204)
chr5 (116-283)||(32841753-32841917)
chr5 (116-283)||(31928907-31929072)
chr5 (116-283)||(33487785-33487950)
chr5 (116-283)||(37183563-37183728)
chr5 (118-283)||(15799399-15799562)
chr5 (118-279)||(15957927-15958086)
chr5 (118-283)||(39524950-39525113)
chr5 (116-283)||(7884367-7884533)
chr5 (211-283)||(4064594-4064666)
chr5 (119-283)||(26898588-26898750)
chr5 (116-186)||(26190104-26190174)
chr5 (116-166)||(28083158-28083208)
chr5 (119-272)||(38692567-38692719)
chr5 (117-186)||(27212972-27213041)
chr5 (211-283)||(20891787-20891859)
chr5 (116-168)||(40619767-40619819)
chr5 (117-184)||(16429250-16429317)
chr5 (211-280)||(23269514-23269583)
chr5 (116-169)||(26093745-26093798)
chr5 (119-184)||(28445284-28445348)
chr5 (116-176)||(21070644-21070704)
chr5 (211-283)||(24203559-24203631)
chr5 (116-180)||(26622393-26622457)
chr5 (124-178)||(5456333-5456387)
chr5 (116-154)||(27158385-27158423)
chr5 (119-160)||(6800725-6800766)
chr5 (131-184)||(8739079-8739132)
chr5 (128-168)||(12464912-12464952)
chr5 (211-283)||(38871845-38871917)
chr5 (116-159)||(18515102-18515145)
chr5 (117-184)||(38640904-38640970)
chr5 (116-174)||(11185969-11186027)
chr5 (221-283)||(12465004-12465066)
chr5 (119-173)||(20891894-20891948)
chr5 (119-169)||(42289742-42289792)
chr5 (118-184)||(43387944-43388009)
chr5 (214-279)||(26190200-26190265)
chr5 (211-263)||(26095286-26095338)
chr5 (211-283)||(27212878-27212950)
chr5 (211-283)||(28083253-28083325)
chr5 (132-184)||(38641112-38641163)
[»] chr4 (53 HSPs)
chr4 (116-283)||(25752225-25752390)
chr4 (118-283)||(25491179-25491342)
chr4 (119-274)||(46440057-46440210)
chr4 (116-169)||(38536503-38536556)
chr4 (118-283)||(54631276-54631439)
chr4 (119-283)||(25538763-25538925)
chr4 (119-283)||(29822800-29822962)
chr4 (124-272)||(40703895-40704041)
chr4 (119-186)||(7931971-7932038)
chr4 (124-186)||(3703045-3703107)
chr4 (116-283)||(31582212-31582369)
chr4 (128-283)||(27741907-27742060)
chr4 (116-176)||(53893808-53893868)
chr4 (116-283)||(19835740-19835905)
chr4 (140-283)||(32442030-32442171)
chr4 (221-283)||(2505916-2505978)
chr4 (116-174)||(48318846-48318904)
chr4 (124-186)||(49001345-49001407)
chr4 (127-176)||(52089579-52089628)
chr4 (116-184)||(4936504-4936572)
chr4 (211-283)||(47456820-47456892)
chr4 (124-176)||(47456930-47456982)
chr4 (211-283)||(52089405-52089477)
chr4 (211-283)||(55052493-55052565)
chr4 (116-283)||(49397232-49397396)
chr4 (116-174)||(14473997-14474055)
chr4 (117-186)||(18050972-18051041)
chr4 (116-169)||(34973196-34973249)
chr4 (116-168)||(5803210-5803262)
chr4 (118-186)||(6003457-6003525)
chr4 (227-283)||(6228704-6228760)
chr4 (116-168)||(20083303-20083355)
chr4 (118-169)||(32601170-32601221)
chr4 (117-180)||(37222285-37222348)
chr4 (118-176)||(38417116-38417174)
chr4 (222-283)||(49001446-49001507)
chr4 (124-169)||(53836074-53836119)
chr4 (124-184)||(372238-372298)
chr4 (116-168)||(6228595-6228647)
chr4 (116-176)||(41322875-41322934)
chr4 (211-283)||(41322967-41323039)
chr4 (124-175)||(2505821-2505872)
chr4 (116-283)||(17932919-17933084)
chr4 (132-175)||(23524113-23524156)
chr4 (226-284)||(4936618-4936676)
chr4 (221-283)||(6003558-6003620)
chr4 (221-283)||(53893910-53893972)
chr4 (214-283)||(41412976-41413045)
chr4 (117-154)||(47072334-47072371)
chr4 (211-272)||(48318939-48319000)
chr4 (116-177)||(48629348-48629409)
chr4 (211-283)||(38536391-38536463)
chr4 (116-176)||(48095644-48095704)
[»] chr6 (27 HSPs)
chr6 (116-283)||(4508084-4508249)
chr6 (116-283)||(2813004-2813171)
chr6 (116-283)||(21514813-21514978)
chr6 (124-283)||(17264622-17264778)
chr6 (116-283)||(3717064-3717229)
chr6 (128-283)||(14587355-14587507)
chr6 (124-186)||(5639168-5639230)
chr6 (118-179)||(237112-237173)
chr6 (119-176)||(2539768-2539825)
chr6 (118-168)||(5699923-5699973)
chr6 (118-168)||(9905388-9905438)
chr6 (117-168)||(1945365-1945416)
chr6 (116-174)||(7413086-7413144)
chr6 (221-283)||(13800912-13800974)
chr6 (118-184)||(16450527-16450593)
chr6 (117-283)||(24604144-24604308)
chr6 (119-176)||(29630749-29630806)
chr6 (211-283)||(5699778-5699850)
chr6 (221-272)||(9905338-9905389)
chr6 (221-283)||(16450426-16450488)
chr6 (124-169)||(30880149-30880194)
chr6 (211-283)||(29289500-29289572)
chr6 (229-283)||(1945423-1945477)
chr6 (116-154)||(7416125-7416163)
chr6 (124-169)||(14037755-14037800)
chr6 (211-279)||(23407013-23407081)
chr6 (211-283)||(29519491-29519563)
[»] chr3 (45 HSPs)
chr3 (124-281)||(28873220-28873375)
chr3 (118-283)||(50716465-50716628)
chr3 (118-283)||(50796219-50796382)
chr3 (116-283)||(35142286-35142450)
chr3 (116-283)||(51258616-51258781)
chr3 (124-283)||(3351856-3352013)
chr3 (211-283)||(35345784-35345856)
chr3 (116-283)||(2358404-2358569)
chr3 (124-283)||(3902596-3902753)
chr3 (116-283)||(46622577-46622742)
chr3 (116-176)||(34821125-34821185)
chr3 (118-176)||(500970-501028)
chr3 (116-186)||(47302326-47302396)
chr3 (116-186)||(51540409-51540479)
chr3 (214-283)||(3938394-3938463)
chr3 (116-169)||(29048654-29048707)
chr3 (124-185)||(38977538-38977599)
chr3 (214-283)||(52777443-52777512)
chr3 (128-176)||(43472762-43472810)
chr3 (116-176)||(49095999-49096059)
chr3 (116-281)||(39150023-39150179)
chr3 (117-186)||(4394286-4394355)
chr3 (124-184)||(19419727-19419787)
chr3 (124-176)||(35345699-35345751)
chr3 (211-283)||(47123238-47123310)
chr3 (211-283)||(47130604-47130676)
chr3 (118-176)||(14828700-14828758)
chr3 (116-186)||(33439494-33439564)
chr3 (118-168)||(41300935-41300985)
chr3 (221-283)||(47302230-47302292)
chr3 (211-269)||(47739808-47739866)
chr3 (216-269)||(30721690-30721743)
chr3 (127-176)||(34009887-34009936)
chr3 (214-283)||(43472847-43472916)
chr3 (211-283)||(51493011-51493084)
chr3 (211-283)||(33439393-33439465)
chr3 (215-283)||(49096105-49096173)
chr3 (116-155)||(30721616-30721655)
chr3 (117-184)||(45244606-45244672)
chr3 (135-178)||(45711886-45711929)
chr3 (130-185)||(47739729-47739784)
chr3 (116-169)||(29036128-29036181)
chr3 (128-177)||(45244822-45244870)
chr3 (124-184)||(32025194-32025252)
chr3 (211-283)||(34821218-34821290)
[»] chr8 (34 HSPs)
chr8 (116-283)||(11698098-11698263)
chr8 (116-283)||(42280673-42280838)
chr8 (119-283)||(28916987-28917149)
chr8 (116-283)||(34853540-34853705)
chr8 (116-283)||(8885234-8885400)
chr8 (118-283)||(14163841-14164004)
chr8 (116-283)||(31519676-31519839)
chr8 (116-283)||(3094897-3095062)
chr8 (211-283)||(36165712-36165785)
chr8 (211-283)||(9073716-9073788)
chr8 (117-184)||(33472286-33472353)
chr8 (119-184)||(7981825-7981890)
chr8 (214-283)||(27927819-27927888)
chr8 (119-184)||(36318105-36318170)
chr8 (211-272)||(36980792-36980853)
chr8 (211-283)||(40328109-40328181)
chr8 (131-283)||(44106435-44106585)
chr8 (116-166)||(4259464-4259514)
chr8 (221-283)||(8621522-8621584)
chr8 (221-283)||(21004596-21004658)
chr8 (117-184)||(31234604-31234672)
chr8 (119-184)||(9845401-9845465)
chr8 (221-274)||(28423641-28423694)
chr8 (119-176)||(40994987-40995044)
chr8 (116-168)||(27927732-27927784)
chr8 (129-169)||(28423745-28423785)
chr8 (124-168)||(40328223-40328266)
chr8 (132-184)||(41530891-41530942)
chr8 (213-283)||(17119756-17119826)
chr8 (124-165)||(9073847-9073888)
chr8 (131-184)||(24627998-24628050)
chr8 (222-283)||(34645589-34645650)
chr8 (215-283)||(6395296-6395364)
chr8 (211-283)||(36318008-36318080)
[»] chr2 (39 HSPs)
chr2 (116-283)||(42894589-42894754)
chr2 (117-283)||(41510207-41510371)
chr2 (116-283)||(25217551-25217716)
chr2 (116-186)||(17474575-17474645)
chr2 (116-186)||(27670803-27670873)
chr2 (116-283)||(41854680-41854846)
chr2 (116-274)||(33452219-33452376)
chr2 (211-283)||(41203056-41203128)
chr2 (116-186)||(44465517-44465587)
chr2 (117-282)||(38308610-38308773)
chr2 (211-283)||(34517313-34517385)
chr2 (116-176)||(38065354-38065414)
chr2 (119-186)||(5507727-5507794)
chr2 (116-170)||(32187661-32187715)
chr2 (118-176)||(39447474-39447532)
chr2 (116-169)||(15994896-15994949)
chr2 (214-283)||(15994986-15995055)
chr2 (116-184)||(17133034-17133102)
chr2 (211-283)||(30763861-30763933)
chr2 (116-176)||(30763967-30764027)
chr2 (211-283)||(32187739-32187811)
chr2 (116-158)||(16750221-16750263)
chr2 (118-184)||(25715770-25715835)
chr2 (118-176)||(34517420-34517478)
chr2 (127-184)||(9847302-9847358)
chr2 (211-283)||(5507631-5507703)
chr2 (127-181)||(33834065-33834119)
chr2 (221-283)||(38065457-38065519)
chr2 (124-169)||(33440295-33440340)
chr2 (211-283)||(19109885-19109957)
chr2 (116-168)||(35251257-35251309)
chr2 (116-176)||(41202966-41203026)
chr2 (117-184)||(9847084-9847150)
chr2 (212-283)||(16750300-16750371)
chr2 (118-176)||(11457269-11457327)
chr2 (59-92)||(9693649-9693682)
chr2 (211-283)||(35251142-35251214)
chr2 (116-168)||(42604803-42604855)
chr2 (124-176)||(45293946-45293998)
[»] chr1 (41 HSPs)
chr1 (116-283)||(41584447-41584612)
chr1 (116-283)||(18583326-18583491)
chr1 (124-283)||(45046640-45046797)
chr1 (124-283)||(6223543-6223698)
chr1 (124-283)||(34006473-34006630)
chr1 (116-283)||(40907716-40907881)
chr1 (116-283)||(42546179-42546344)
chr1 (211-283)||(52744718-52744790)
chr1 (116-283)||(28866412-28866577)
chr1 (116-283)||(38885425-38885590)
chr1 (117-283)||(27795042-27795206)
chr1 (116-186)||(49786575-49786645)
chr1 (211-283)||(17000591-17000663)
chr1 (211-283)||(34162596-34162668)
chr1 (116-283)||(33611192-33611357)
chr1 (116-283)||(24472610-24472774)
chr1 (116-181)||(41584363-41584428)
chr1 (127-184)||(43319078-43319134)
chr1 (211-283)||(7011422-7011494)
chr1 (211-283)||(26723363-26723435)
chr1 (211-283)||(49677695-49677767)
chr1 (116-159)||(40650486-40650529)
chr1 (118-184)||(800677-800742)
chr1 (221-283)||(3561220-3561282)
chr1 (119-169)||(49677787-49677837)
chr1 (214-283)||(23442950-23443019)
chr1 (214-283)||(45567768-45567837)
chr1 (117-184)||(9445972-9446038)
chr1 (119-186)||(44572885-44572952)
chr1 (118-168)||(6099725-6099775)
chr1 (118-168)||(6099905-6099955)
chr1 (124-176)||(8704308-8704360)
chr1 (227-283)||(15069732-15069788)
chr1 (124-176)||(26230357-26230409)
chr1 (211-283)||(40650550-40650622)
chr1 (118-176)||(3561119-3561177)
chr1 (116-168)||(7011538-7011588)
chr1 (119-168)||(38131210-38131259)
chr1 (211-283)||(25563289-25563361)
chr1 (127-179)||(43318867-43318918)
chr1 (124-168)||(51307598-51307642)
[»] scaffold0137 (1 HSPs)
scaffold0137 (116-283)||(9280-9444)
[»] scaffold0508 (1 HSPs)
scaffold0508 (116-179)||(3175-3238)
[»] scaffold0182 (1 HSPs)
scaffold0182 (116-167)||(23299-23350)
[»] scaffold0027 (2 HSPs)
scaffold0027 (116-166)||(141776-141826)
scaffold0027 (211-283)||(141839-141911)
[»] scaffold0010 (2 HSPs)
scaffold0010 (211-283)||(140697-140769)
scaffold0010 (119-173)||(140806-140860)
[»] scaffold0564 (1 HSPs)
scaffold0564 (119-184)||(4680-4745)
[»] scaffold0018 (1 HSPs)
scaffold0018 (119-176)||(174146-174203)
[»] scaffold0006 (1 HSPs)
scaffold0006 (221-273)||(59855-59907)
[»] scaffold0016 (2 HSPs)
scaffold0016 (117-169)||(205893-205944)
scaffold0016 (127-184)||(205692-205748)
[»] scaffold0770 (1 HSPs)
scaffold0770 (128-156)||(4122-4150)
[»] scaffold0029 (1 HSPs)
scaffold0029 (128-156)||(102426-102454)


Alignment Details
Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 116 - 283
Target Start/End: Original strand, 42925422 - 42925587
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||   ||||||||||| ||         || ||||    
T  42925422 tgggtctaaacgatggaattttggattttgaggggcggagtcccataagaagtcccttctaagggag---tcatggtccttgaattgtttctgattttct 42925518  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||| | |||||||||||||||||||||||| ||| |||| |||||||||||||||||||| ||||||||    
T  42925519 gggtaagtttcggagcaatccgatcaagtagcccgaaaacccaatttttgactaagaacaagtaacaat 42925587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 116 - 283
Target Start/End: Original strand, 37518045 - 37518210
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| |||||||||||||||||||||||||||||||||||  ||||||||| |||||| || ||   ||||||||||| ||         || ||||    
T  37518045 tgggtctaaacgatggaattttggattttgaggggcggagtcctgtaagaagtctcttctatgggag---tcatggtccttgaattttttctgattttct 37518141  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| ||||||||||||||||||||| ||  ||||||| ||||||||| |||||||||| ||||||||    
T  37518142 ggggaagtttcggagcaatccgatcaaatagtccaaaaacccaatttttaactaagaacaggtaacaat 37518210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 283
Target Start/End: Complemental strand, 9152168 - 9152008
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtccttaannnnnnnnnatcttctg 215  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||| || ||   ||||||||||| |          | |||||    
T  9152168 tgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagtcccttctaggggag---tcatggtccttgatttttt----ttttctg 9152076  T
Q  216 gggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
     ||| ||||||||||||||||||||||||  ||||||| || |||||| |||||||||||||||||||    
T  9152075 tggaagtttcggagcaatccgatcaagtagtccaaaaacccgattttttactaagaacatgtaacaat 9152008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 283
Target Start/End: Complemental strand, 43737459 - 43737294
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| |||||||||||||| |||||||||||||||||||||| |||||||  ||||||||| ||   ||||||||||| ||         || ||||    
T  43737459 tgggtctaaacgatggaattttagattttgaggggcggagtcccacaagaagttccttctaagggag---tcatggtccttgaattttttctgattttct 43737363  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||| |  ||||||||||||||||||||||| ||| |||| ||  ||||| |||||||||||||||||||    
T  43737362 gggaaaatttcggagcaatccgatcaagtagcccgaaaacccggtttttaactaagaacatgtaacaat 43737294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 36468412 - 36468484
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||| |||||||||||||||||||||||| ||| |||| || |||||| |||||||||||||||||||    
T  36468412 ttctggggaagtttcggagcaatccgatcaagtagcccgaaaacccgattttttactaagaacatgtaacaat 36468484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 116 - 283
Target Start/End: Original strand, 42864883 - 42865049
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcac-ttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttc 213  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||||||||||| | |||||||| ||   ||||||||||| ||         || |||    
T  42864883 tgggtctaaacgattgaattttggattttgaggggcggagtcccataagaagtctctttctaagggag---tcatggtccttgaattgtttctaattttc 42864979  T
Q  214 tggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||||| ||||| ||||||||||||||||||  || |||| |  ||||||||| ||||||| || |||||    
T  42864980 tggggatgtttcagagcaatccgatcaagtagtccgaaaacctgatttttgaccaagaacaggtgacaat 42865049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 119 - 281
Target Start/End: Complemental strand, 36629577 - 36629417
Alignment:
Q  119 gtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctggg 217  Q
    |||| ||||||||||||||||||||||| ||  |||||||| ||||||||| |||||| || ||||||   ||||||| ||         || || ||||    
T  36629577 gtctaaacgatggaattttggattttgaaggatggagtcccgtaagaagtcccttctacgggagtcat---ggtccttgaattttttctgattttttggg 36629481  T
Q  218 gaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaaca 281  Q
    || |||||||||||||||||||||||| ||| |||| || |||||||||||||| || ||||||    
T  36629480 gaagtttcggagcaatccgatcaagtagcccgaaaacccgatttttgactaagaccaggtaaca 36629417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 47202864 - 47202794
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcat 186  Q
    ||||||| ||| |||||||||||||||||||||||||||||||| ||||||||| |||||| || ||||||    
T  47202864 tgggtctaaacaatggaattttggattttgaggggcggagtcccttaagaagtcccttctatgggagtcat 47202794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 283
Target Start/End: Complemental strand, 19818754 - 19818592
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctgg 216  Q
    ||||| |||||||||||||||||||| |||||| |||||||| ||||||||| |||||| || ||||||   ||||||| ||         || ||||||    
T  19818754 ggtctaaacgatggaattttggattt-gaggggtggagtcccgtaagaagtcccttctacgggagtcat---ggtccttgaattttttctgattttctgg 19818659  T
Q  217 ggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    | | ||||||||||||||||||||||||  ||||||| || ||||| ||| ||||||| ||||||||    
T  19818658 gaaagtttcggagcaatccgatcaagtagtccaaaaacccgattttcgaccaagaacaggtaacaat 19818592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 43186154 - 43186094
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||| ||||    
T  43186154 aacgatggaattttggatttttaggggcggagtcccgtaagaagtcccttctaagggagtc 43186094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 128 - 283
Target Start/End: Complemental strand, 31643405 - 31643253
Alignment:
Q  128 atggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctggggaggtttcg 226  Q
    ||||||||||||||||||||||| |||||||||||||||||  ||||||||| ||   ||||||||||| ||         || || || ||| |||||     
T  31643405 atggaattttggattttgaggggtggagtcccataagaagttccttctaagggag---tcatggtccttgaattttttctgattttttgcggaagtttca 31643309  T
Q  227 gagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||||||||||||  ||  ||| || ||||||||||||||||||||||||||    
T  31643308 gagcaatccgatcaagtagtcc-gaaacccgatttttgactaagaacatgtaacaat 31643253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 26554945 - 26554995
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaa 166  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  26554945 tgggtctaaacgatggaattttggattttgaggggcagagtcccataagaa 26554995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 24041979 - 24042032
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtc 169  Q
    ||||||| ||||||||| |||||||||||||||||||||||||| |||||||||    
T  24041979 tgggtctaaacgatggagttttggattttgaggggcggagtcccgtaagaagtc 24042032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 3936392 - 3936320
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||| |||||||||||||||||||||| |  || ||||||| ||||||||||||||| | ||||||||    
T  3936392 ttctggggaagtttcggagcaatccgatcaagcagtccgaaaatccgatttttgactaagaataggtaacaat 3936320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 6466919 - 6466971
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagt 168  Q
    ||||||| ||||||| |||||| ||||||||||||||||||||||||||||||    
T  6466919 tgggtctaaacgatgaaattttagattttgaggggcggagtcccataagaagt 6466971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 7115051 - 7115119
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    ||||||| ||| ||||||||||||||||||||||  |||||||| ||||||||| ||||||||| ||||    
T  7115051 tgggtctaaacaatggaattttggattttgagggaaggagtcccgtaagaagtcccttctaagggagtc 7115119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 8155276 - 8155224
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagt 168  Q
    ||||||| ||| |||||||||||||||||||||||||||||||| ||||||||    
T  8155276 tgggtctaaacaatggaattttggattttgaggggcggagtcccgtaagaagt 8155224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 48705781 - 48705841
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||| |||||||||| ||||||    
T  48705781 tgggtctaaacgatgaaattttggaatttgaggggcggagtcctataagaagtcccttcta 48705841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 16278389 - 16278322
Alignment:
Q  117 gggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    |||||| ||||||| ||||||||||||||| | |||||||||| ||||||||| ||||||||| ||||    
T  16278389 gggtctaaacgatgaaattttggattttgatgtgcggagtcccgtaagaagtcccttctaagggagtc 16278322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 175
Target Start/End: Original strand, 33573830 - 33573889
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttct 175  Q
    ||||||| ||| ||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  33573830 tgggtctaaacaatgaaattttggattttgaggggcggagtcccgtaagaagtcccttct 33573889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 3304535 - 3304593
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    ||||| ||| ||| |||||||||||||||||||||||||||| ||||||||| ||||||    
T  3304535 ggtctaaacaatgaaattttggattttgaggggcggagtcccgtaagaagtcccttcta 3304593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 19225388 - 19225450
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcat 186  Q
    |||||||||||||||||||||||||||||||||||  ||||||||  |||||| || ||||||    
T  19225388 aacgatggaattttggattttgaggggcggagtcctgtaagaagttccttctatgggagtcat 19225450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 36408645 - 36408583
Alignment:
Q  221 gtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||||||||||||||||||  || |||| | |||||||||||||||||| ||||||||    
T  36408645 gtttcggagcaatccgatcaagtagtccgaaaaccaaatttttgactaagaacacgtaacaat 36408583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 26555032 - 26555104
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||| | ||||| |||||||||||||||||| ||| |||| ||  ||||| |||||||||||||||||||    
T  26555032 ttctgggaaagtttcagagcaatccgatcaagtagcccgaaaacccgtttttttactaagaacatgtaacaat 26555104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 216 - 283
Target Start/End: Original strand, 3304638 - 3304705
Alignment:
Q  216 gggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||| ||||| |||||||||||||||||| ||| | || || ||||||||||||||||| ||||||||    
T  3304638 gggaagtttcagagcaatccgatcaagtagcccgagaacccgatttttgactaagaacaggtaacaat 3304705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 283
Target Start/End: Original strand, 24690218 - 24690281
Alignment:
Q  221 gtttcggagcaatccgatcaagtaaccc-aaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||||||||||||||||||||||| ||| |||||||| ||| ||||||||||||  ||||||||    
T  24690218 gtttcggagcaatccgatcaagtagcccgaaaaatccgattattgactaagaacgggtaacaat 24690281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 116 - 163
Target Start/End: Original strand, 28230274 - 28230321
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataa 163  Q
    ||||||| |||||||||||||| |||||||||||| ||||||||||||    
T  28230274 tgggtctaaacgatggaattttagattttgaggggtggagtcccataa 28230321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 179
Target Start/End: Original strand, 8214377 - 8214439
Alignment:
Q  117 gggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaagg 179  Q
    |||||| || |||||||||||||||| ||||||||| |||| | ||||||||| |||||||||    
T  8214377 gggtctaaaagatggaattttggattgtgaggggcgaagtctcgtaagaagtcccttctaagg 8214439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 182
Target Start/End: Original strand, 37402771 - 37402821
Alignment:
Q  132 aattttggattttgaggggcggagtcccataagaagtcacttctaaggaag 182  Q
    ||||||||||||||||| ||||| ||||||||||||||  |||||||||||    
T  37402771 aattttggattttgaggtgcggaatcccataagaagtccattctaaggaag 37402821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 33573921 - 33573990
Alignment:
Q  214 tggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||||| ||||| ||||||||||||||||||   | |||| ||||||||||| ||| |||||||||||||    
T  33573921 tggggaagtttcagagcaatccgatcaagtagttcgaaaacccaatttttgattaaaaacatgtaacaat 33573990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 36468321 - 36468374
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtc 169  Q
    ||||||| ||||||| ||||||| || ||||||||||||||||| |||||||||    
T  36468321 tgggtctaaacgatgaaattttgaatcttgaggggcggagtcccgtaagaagtc 36468374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 177
Target Start/End: Original strand, 47239508 - 47239561
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaa 177  Q
    ||||||| |||||||||||||||| |||| |||||| ||||||||| |||||||    
T  47239508 aacgatgaaattttggattttgagaggcgaagtcccgtaagaagtcccttctaa 47239561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 1519083 - 1519031
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    |||||||||||||| |||||||||| |||||||| |||| |||||| ||||||    
T  1519083 aacgatggaattttagattttgaggagcggagtcacataggaagtcccttcta 1519031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 37398766 - 37398838
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||| |||| |||||||||||||| ||||||||| || ||||| | ||||||| ||||||||||  |||||||    
T  37398766 ttctagggaagtttcggagcaatctgatcaagtagcctaaaaaccgaattttttactaagaacaactaacaat 37398838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 159
Target Start/End: Complemental strand, 36408732 - 36408697
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtccc 159  Q
    ||||||||||||||||||||||||||||||| ||||    
T  36408732 aacgatggaattttggattttgaggggcggactccc 36408697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 1518981 - 1518919
Alignment:
Q  221 gtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||||||||||||||||||  || |||| || |||||| ||||||||||  |||||||    
T  1518981 gtttcggagcaatccgatcaagtagtccgaaaaccctattttttactaagaacagctaacaat 1518919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 184
Target Start/End: Original strand, 5731063 - 5731128
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    ||||| || |||||||||||||||||||| ||| |||||| | ||||||||| ||||||||| ||||    
T  5731063 ggtctaaatgatggaattttggattttga-gggtggagtctcgtaagaagtcccttctaagggagtc 5731128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 272
Target Start/End: Original strand, 19225473 - 19225534
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaa 272  Q
    ||||||||| ||||||||||||||||||||| ||  || |||| |  |||||||||||||||    
T  19225473 ttctggggaagtttcggagcaatccgatcaaatagtccgaaaacctgatttttgactaagaa 19225534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 274
Target Start/End: Original strand, 48776094 - 48776147
Alignment:
Q  221 gtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaaca 274  Q
    |||||||||||||| ||| ||||| | | |||||| ||||||||||||||||||    
T  48776094 gtttcggagcaatctgattaagtagctcgaaaatcaaatttttgactaagaaca 48776147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 7115145 - 7115217
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| ||| ||||| ||||||| |||||||||| ||| ||||  | |||||||||||||||||  |||||||    
T  7115145 ttctgaggaagtttcagagcaatacgatcaagtagcccgaaaacacgatttttgactaagaacaactaacaat 7115217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 6e-34; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 126 - 283
Target Start/End: Complemental strand, 38372630 - 38372475
Alignment:
Q  126 cgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctggggaggttt 224  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||   ||||||| ||         |||||||||||| ||||    
T  38372630 cgatggaattttggattttgaggggtggagtcccgtaagaagtctcttctaaggaagtcat---ggtccttgaattttttctgatcttctggggaagttt 38372534  T
Q  225 cggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||||| ||||||||||||| ||| |||| ||||||||| |||||||||||||||||||    
T  38372533 cggagcgatccgatcaagtagcccgaaaacccaatttttaactaagaacatgtaacaat 38372475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 116 - 283
Target Start/End: Complemental strand, 6157070 - 6156905
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||| || ||| || ||   ||||||||||| ||         || ||||    
T  6157070 tgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagtccctactacgggag---tcatggtccttgaattttttctgattttct 6156974  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||| | |||||||||||||||||||||||| |||||||| ||  ||||| |||||||||||||||||||    
T  6156973 gggaaagtttcggagcaatccgatcaagtagcccaaaaacccggtttttaactaagaacatgtaacaat 6156905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 118 - 283
Target Start/End: Original strand, 31221123 - 31221286
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctgg 216  Q
    ||||| ||||||| |||||||||||||||||||||||||| | ||||||||| |||||| ||||||||    ||||||| ||         || ||||||    
T  31221123 ggtctaaacgatgaaattttggattttgaggggcggagtctcgtaagaagtcccttctatggaagtcac---ggtccttgaattttttctgattttctgg 31221219  T
Q  217 ggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||| |||||||||||||||||||||||| ||| |||| ||| ||||| |||||||||||||||||||    
T  31221220 ggaagtttcggagcaatccgatcaagtagcccgaaaacccagtttttaactaagaacatgtaacaat 31221286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 283
Target Start/End: Complemental strand, 14112204 - 14112039
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||| || |    ||||||||||| ||         || ||||    
T  14112204 tgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagtcccttctatggga---ttcatggtccttgaattttttctgattttct 14112108  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| ||||||||||||||| ||||||||  || |||| || ||||||||||||||||| ||||||||    
T  14112107 ggggaagtttcggagcaatcctatcaagtagtccgaaaacccgatttttgactaagaacaagtaacaat 14112039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 283
Target Start/End: Original strand, 32841753 - 32841917
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||   ||||| ||||| ||         || ||||    
T  32841753 tgggtctaaacgatggaattttggattttgaggggcggagtcccataagaagtcccttctaggggag---tcatgatccttgaattttttctgattttct 32841849  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
     ||||  ||||||||||||||||||||||| ||| |||| || ||||||||||| ||||||||||||||    
T  32841850 -gggaattttcggagcaatccgatcaagtagcccgaaaacccgatttttgactacgaacatgtaacaat 32841917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 116 - 283
Target Start/End: Original strand, 31928907 - 31929072
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| ||||||| ||||||||||||||| ||||||||||||  |||||||| ||||||||| ||   ||||||||||| ||         || ||||    
T  31928907 tgggtctaaacgatgaaattttggattttgaagggcggagtcccgcaagaagtcccttctaagggag---tcatggtccttgaattttttctgattttct 31929003  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| |||||||||||||||||||||||| ||| |||| |   ||||| |||||||||| ||||||||    
T  31929004 ggggaagtttcggagcaatccgatcaagtagcccgaaaacctggtttttaactaagaacaggtaacaat 31929072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 116 - 283
Target Start/End: Complemental strand, 33487950 - 33487785
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||| |||||||| ||||||||| ||   ||||| ||||| |          || ||||    
T  33487950 tgggtctaaacgatggaattttggatttttaggggcggggtcccaaaagaagtcccttctaagggag---tcatgatccttgacttttttctgattttct 33487854  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| ||||||||||||  |||||||||| ||| ||||  | ||||||||||||||||||||||||||    
T  33487853 ggggaagtttcggagcaaatcgatcaagtagcccgaaaactcgatttttgactaagaacatgtaacaat 33487785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 116 - 283
Target Start/End: Original strand, 37183563 - 37183728
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| || ||||||||||||||||||||||||||||||||| ||||| ||| |||||| || ||   ||||||||||| ||         || || |    
T  37183563 tgggtctaaatgatggaattttggattttgaggggcggagtcccgtaagatgtcccttctacgggag---tcatggtccttgaattttttctgattttat 37183659  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| ||||||||||||||||||||||||  |  |||| || ||||||||||||||||| ||||||||    
T  37183660 ggggatgtttcggagcaatccgatcaagtagtctgaaaacccgatttttgactaagaacaagtaacaat 37183728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 283
Target Start/End: Complemental strand, 15799562 - 15799399
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctgg 216  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||  |||||| |||||| || || |||   ||||||| ||         || ||||||    
T  15799562 ggtctaaacgatggaattttggattttgaggggtggagtcccattggaagtcccttctaggggaggcat---ggtccttgaattttttttgattttctgg 15799466  T
Q  217 ggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    | | |||||||||||||||| ||||||| |||  ||| || ||||||||||||||||||||||||||    
T  15799465 gcaagtttcggagcaatccggtcaagtagcccggaaacccgatttttgactaagaacatgtaacaat 15799399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 279
Target Start/End: Complemental strand, 15958086 - 15957927
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctgg 216  Q
    ||||| ||||||| |||||||||||||||| |||| |||||||||||||||| ||||||||| ||   | ||||||||| ||         || ||||||    
T  15958086 ggtctaaacgatgaaattttggattttgagaggcgaagtcccataagaagtcgcttctaagggag---ttatggtccttgaattttttctgattttctgg 15957990  T
Q  217 ggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaa 279  Q
    ||| ||||||||||||||||||||||||  || |||| |  ||||||||||||||||| ||||    
T  15957989 ggaagtttcggagcaatccgatcaagtagtccgaaaacctgatttttgactaagaacaggtaa 15957927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 283
Target Start/End: Complemental strand, 39525113 - 39524950
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctgg 216  Q
    ||||| |||||||||||||||||||||||||||| |||||||| |||||||  ||||||||| ||   ||||||||||| ||         || ||||||    
T  39525113 ggtctaaacgatggaattttggattttgaggggcagagtcccacaagaagttccttctaagggag---tcatggtccttgaattttttctgattttctgg 39525017  T
Q  217 ggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||  ||||||||||||| |||||||||   | |||| |||||||| ||||||||||| ||||||||    
T  39525016 ggaaatttcggagcaatctgatcaagtagttcgaaaacccaattttggactaagaacaagtaacaat 39524950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 116 - 283
Target Start/End: Complemental strand, 7884533 - 7884367
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| ||| ||| |||||| |||||||||||||||||| || ||||||||| |||||| || ||   ||||||||||| ||         || || |    
T  7884533 tgggtctaaacaatgaaattttagattttgaggggcggagttccgtaagaagtctcttctacgggag---tcatggtccttgaatgttttctgattttat 7884437  T
Q  215 -ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
     ||||| |||||||||||||||||||||||| ||| ||||||| ||| ||||||||||||||||||||||    
T  7884436 aggggaagtttcggagcaatccgatcaagtagcccgaaaatccgattcttgactaagaacatgtaacaat 7884367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 4064594 - 4064666
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||| ||||||||||||||| |||||||| ||| ||||| | ||||||||||||||||| ||||||||    
T  4064594 ttctggggaagtttcggagcaatccaatcaagtagcccgaaaattcgatttttgactaagaacaggtaacaat 4064666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 283
Target Start/End: Original strand, 26898588 - 26898750
Alignment:
Q  119 gtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctggg 217  Q
    |||| ||||||| |||||||||||||||||||||||||||  ||||||||| ||||||  | ||||||   ||||||| ||         || || ||||    
T  26898588 gtctaaacgatgaaattttggattttgaggggcggagtcctgtaagaagtcccttctacaggagtcat---ggtccttgaattttttctgattttttggg 26898684  T
Q  218 gaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
     | |||||||||||||||||||||||| ||| ||||  | |||||||||||||||||| |||||||    
T  26898685 caagtttcggagcaatccgatcaagtagcccgaaaactcgatttttgactaagaacatataacaat 26898750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 26190104 - 26190174
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcat 186  Q
    ||||||| ||| |||||||||||||||||||||||||||||||| ||||||||  |||||| || ||||||    
T  26190104 tgggtctaaacaatggaattttggattttgaggggcggagtcccttaagaagttccttctaggggagtcat 26190174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 28083158 - 28083208
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaa 166  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  28083158 tgggtctgaacgatggaattttggattttgaggggcatagtcccataagaa 28083208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 272
Target Start/End: Original strand, 38692567 - 38692719
Alignment:
Q  119 gtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcactt-ctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctgg 216  Q
    |||| |||||| ||||||||||||||||||||||||||||| ||||||||| ||| |||||| ||   ||||||||||| ||         || || |||    
T  38692567 gtctaaacgatagaattttggattttgaggggcggagtcccgtaagaagtcccttcctaagggag---tcatggtccttgaattttttctgattttttgg 38692663  T
Q  217 ggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaa 272  Q
    ||| ||||||||||||||||| ||||||  || |||| || |||||||||||||||    
T  38692664 ggaagtttcggagcaatccgaccaagtagtccgaaaacccgatttttgactaagaa 38692719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 117 - 186
Target Start/End: Complemental strand, 27213041 - 27212972
Alignment:
Q  117 gggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcat 186  Q
    |||||| ||| |||||||||| ||||||||||||||||||||| ||||||||| |||||| || ||||||    
T  27213041 gggtctaaacaatggaattttagattttgaggggcggagtcccgtaagaagtcccttctaggggagtcat 27212972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 20891859 - 20891787
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||| |||||||||||||||||||||||| ||  |||| || ||||||||||||||| | ||||||||    
T  20891859 ttctggggaagtttcggagcaatccgatcaagtagcctgaaaacccgatttttgactaagaataggtaacaat 20891787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 40619767 - 40619819
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagt 168  Q
    ||||||| || ||||||||||||||||||||||||||||||||| ||||||||    
T  40619767 tgggtctaaatgatggaattttggattttgaggggcggagtcccgtaagaagt 40619819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 16429317 - 16429250
Alignment:
Q  117 gggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    |||||| ||||||  ||||||| |||||||||||||||||||| ||||||||| ||||||||| ||||    
T  16429317 gggtctaaacgataaaattttgaattttgaggggcggagtcccgtaagaagtcccttctaaggtagtc 16429250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 23269583 - 23269514
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaac 280  Q
    ||||||||| |||||| ||||||||||||||||| ||| |||| || |||||||| ||||||||| ||||    
T  23269583 ttctggggaagtttcgaagcaatccgatcaagtagcccgaaaacccgatttttgaataagaacatctaac 23269514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 26093798 - 26093745
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtc 169  Q
    ||||||| || |||||||||||||||||||||||| |||||||| |||||||||    
T  26093798 tgggtctaaatgatggaattttggattttgaggggaggagtcccgtaagaagtc 26093745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 184
Target Start/End: Original strand, 28445284 - 28445348
Alignment:
Q  119 gtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    |||| ||||||||||||||||||||||| |||||||||  ||||||||||| ||||||||| ||||    
T  28445284 gtctaaacgatggaattttggattttga-gggcggagtatcataagaagtcccttctaagggagtc 28445348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 21070704 - 21070644
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    ||||||| ||| |||||||||||||||||||||||| | |||| |||||||||| ||||||    
T  21070704 tgggtctaaacaatggaattttggattttgaggggcagtgtccaataagaagtcccttcta 21070644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 24203559 - 24203631
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||| |||| ||||||||||||||||||||| || ||| ||||  |||||||| |||||||||| ||||||||    
T  24203559 ttcttgggaagtttcggagcaatccgatcaaatagcccgaaaactcaatttttaactaagaacaggtaacaat 24203631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 180
Target Start/End: Complemental strand, 26622457 - 26622393
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaagga 180  Q
    ||||||| ||||||  ||||||| |||||||||||||||||| ||||||||||| | ||||||||    
T  26622457 tgggtctaaacgataaaattttgaattttgaggggcggagtctcataagaagtctcatctaagga 26622393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 178
Target Start/End: Complemental strand, 5456387 - 5456333
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaag 178  Q
    ||||||| |||||||||||||||| ||||||||||| |||||| || ||||||||    
T  5456387 aacgatgaaattttggattttgagaggcggagtcccgtaagaaatcccttctaag 5456333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 27158423 - 27158385
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcgga 154  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  27158423 tgggtctaaacgatggaattttggattttgaggggcgga 27158385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 6800725 - 6800766
Alignment:
Q  119 gtctgaacgatggaattttggattttgaggggcggagtccca 160  Q
    |||| ||||||| |||||||||||||||||||||||||||||    
T  6800725 gtctaaacgatgaaattttggattttgaggggcggagtccca 6800766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 8739079 - 8739132
Alignment:
Q  131 gaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    ||||||||||||||||||||||||||||| ||| ||||  ||||||||| ||||    
T  8739079 gaattttggattttgaggggcggagtcccgtaataagttccttctaagggagtc 8739132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 168
Target Start/End: Original strand, 12464912 - 12464952
Alignment:
Q  128 atggaattttggattttgaggggcggagtcccataagaagt 168  Q
    |||||||||||||||||||||||| ||||||| ||||||||    
T  12464912 atggaattttggattttgaggggcagagtcccgtaagaagt 12464952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 38871917 - 38871845
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||| | |||||||||||||||||| |||||  |  |||| || ||||||||||||||||| ||||||||    
T  38871917 ttctgggaaagtttcggagcaatccgattaagtagtctgaaaacccgatttttgactaagaacaggtaacaat 38871845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 18515145 - 18515102
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtccc 159  Q
    ||||||| || ||||||||||| |||||||||||||||||||||    
T  18515145 tgggtctaaatgatggaattttagattttgaggggcggagtccc 18515102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 38640970 - 38640904
Alignment:
Q  117 gggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    |||||| || |||||||||||||||||||| ||||| |||||| |||||||||| || ||||| ||||    
T  38640970 gggtctaaatgatggaattttggattttga-gggcgtagtcccgtaagaagtcatttataagggagtc 38640904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 11185969 - 11186027
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttc 174  Q
    ||||||| |||||| |||||||| |||||||||||||||||  | ||||||||| ||||    
T  11185969 tgggtctaaacgattgaattttgaattttgaggggcggagtatcgtaagaagtcccttc 11186027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 283
Target Start/End: Original strand, 12465004 - 12465066
Alignment:
Q  221 gtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| ||||||||||||||||||  |  |||| || ||||||||||||||||| ||||||||    
T  12465004 gtttcagagcaatccgatcaagtagtctgaaaacccgatttttgactaagaacaagtaacaat 12465066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 20891948 - 20891894
Alignment:
Q  119 gtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcactt 173  Q
    |||| ||||||||||||||||||||||| || |||| |||| ||||||||| |||    
T  20891948 gtctaaacgatggaattttggattttgaaggacggaatcccgtaagaagtccctt 20891894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 42289792 - 42289742
Alignment:
Q  119 gtctgaacgatggaattttggattttgaggggcggagtcccataagaagtc 169  Q
    |||| |||||| ||||||||||||||||||||| |||||||| || |||||    
T  42289792 gtctaaacgatagaattttggattttgaggggcagagtcccagaaaaagtc 42289742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 184
Target Start/End: Original strand, 43387944 - 43388009
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    ||||| || |||||||||||||||||||| || ||||||||| |||||||||  |||||||| ||||    
T  43387944 ggtctaaatgatggaattttggattttga-ggacggagtcccgtaagaagtcctttctaagggagtc 43388009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 279
Target Start/End: Original strand, 26190200 - 26190265
Alignment:
Q  214 tggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaa 279  Q
    |||||| ||||| ||||||||||||| ||||  || |||| || ||||||||||||||||| ||||    
T  26190200 tggggaagtttcagagcaatccgatctagtagtccgaaaacccgatttttgactaagaacaggtaa 26190265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 263
Target Start/End: Complemental strand, 26095338 - 26095286
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaattttt 263  Q
    ||||||||| |||||||||||||| || |||||| |||||||| || ||||||    
T  26095338 ttctggggaagtttcggagcaatctgaacaagtagcccaaaaacccgattttt 26095286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 27212950 - 27212878
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||| |||| || |||||||||||| ||||| ||  || |||| || ||||||||||||||||| ||||||||    
T  27212950 ttctagggaagtatcggagcaatccaatcaaatagtccgaaaacccgatttttgactaagaacaggtaacaat 27212878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 28083253 - 28083325
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||| || |||||||||||||||||||||  || ||||  | ||||||  ||||||||| ||||||||    
T  28083253 ttctggggaagtatcggagcaatccgatcaagtagtccgaaaactcgattttttcctaagaacaggtaacaat 28083325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 38641163 - 38641112
Alignment:
Q  132 aattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    ||||||||||||||||||  || ||||| ||||||||| ||||||||||||||    
T  38641163 aattttggattttgagggcagg-gtcccgtaagaagtctcttctaaggaagtc 38641112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 9e-33; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 116 - 283
Target Start/End: Original strand, 25752225 - 25752390
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||   ||||||||||| ||         || ||||    
T  25752225 tgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagtctcttctaagggag---tcatggtccttgaatcttttctgattttct 25752321  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| |||||||||||||| ||||||||| ||| |||| || ||||||||||||||||| ||||||||    
T  25752322 ggggaagtttcggagcaatctgatcaagtagcccgaaaacccgatttttgactaagaacaggtaacaat 25752390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 283
Target Start/End: Original strand, 25491179 - 25491342
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctgg 216  Q
    ||||| |||||||||||||||||||||||||| |||| |||| | ||||||| ||||||||| ||||||   ||||||| ||         || ||||||    
T  25491179 ggtctaaacgatggaattttggattttgagggacggaatcccttgagaagtcccttctaagggagtcat---ggtccttgaactttttctgattttctgg 25491275  T
Q  217 ggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||  ||| |||||||||||||||||||  ||||||| || ||||||||||||||||||||||||||    
T  25491276 ggaaattttggagcaatccgatcaagtagtccaaaaacccgatttttgactaagaacatgtaacaat 25491342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 119 - 274
Target Start/End: Original strand, 46440057 - 46440210
Alignment:
Q  119 gtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctggg 217  Q
    |||| ||||||| |||||||||||||||||||||||||||| ||||||||| |||||  || ||   ||||||||||| ||         || |||||||    
T  46440057 gtctaaacgatgaaattttggattttgaggggcggagtcccgtaagaagtcccttctttgggag---tcatggtccttgaattttttctgattttctggg 46440153  T
Q  218 gaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaaca 274  Q
    || ||||||||||||||||||||||||  || ||||||| |||||||| ||||||||    
T  46440154 gaagtttcggagcaatccgatcaagtagtccgaaaatccgatttttgattaagaaca 46440210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 38536556 - 38536503
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtc 169  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38536556 tgggtctaaacgatggaattttggattttgaggggcggagtcccataagaagtc 38536503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 118 - 283
Target Start/End: Original strand, 54631276 - 54631439
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctgg 216  Q
    ||||| ||||||||||||||| ||||||||| |||||||||| |||||||||  ||||| || ||||||   ||||||| ||         || ||||||    
T  54631276 ggtctaaacgatggaattttgtattttgaggtgcggagtcccgtaagaagtcctttctatgggagtcat---ggtccttgaattttttctgattttctgg 54631372  T
Q  217 ggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||| |||| |||||||||||||||||||  || |||| || ||||||||||||||||| ||||||||    
T  54631373 ggaagttttggagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaat 54631439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 119 - 283
Target Start/End: Original strand, 25538763 - 25538925
Alignment:
Q  119 gtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctggg 217  Q
    |||| |||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||| ||   ||||| ||||| ||         || |||||||    
T  25538763 gtctaaacgatggtattttggattttgaggggcggagtcccgtaagaagtctcttctaagggag---tcatgttccttgaaatttttctgattttctggg 25538859  T
Q  218 gaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    || ||||||||| ||||| |||||||| ||  |||| | |||||||||||||||| | ||||||||    
T  25538860 gatgtttcggagaaatccaatcaagtagcctgaaaaccaaatttttgactaagaagaggtaacaat 25538925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 119 - 283
Target Start/End: Complemental strand, 29822962 - 29822800
Alignment:
Q  119 gtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctggg 217  Q
    |||| ||||||||||||||| |||||||||||| ||||||| || |||||| |||||| || ||||||   ||||||| ||         ||  ||||||    
T  29822962 gtctaaacgatggaattttgaattttgaggggcagagtcccgtaggaagtcccttctacgggagtcat---ggtccttgaattttttctgattgtctggg 29822866  T
Q  218 gaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
     | ||||  |||||||||||||||||| ||| |||||||||||||||| |||||||||||||||||    
T  29822865 caagtttttgagcaatccgatcaagtagcccgaaaatccaatttttgattaagaacatgtaacaat 29822800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 124 - 272
Target Start/End: Complemental strand, 40704041 - 40703895
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctggggaggt 222  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||  ||||||| ||||   ||||||||||| ||         || ||||||||| ||    
T  40704041 aacgatggaattttagattttgaggggcggagtcccgtaagaagttccttctaatgaag---tcatggtccttgaattttttctgattttctggggaagt 40703945  T
Q  223 ttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaa 272  Q
    |||  |||||||||||||||||  ||||||| || |||||||||||||||    
T  40703944 ttcttagcaatccgatcaagtagtccaaaaacccgatttttgactaagaa 40703895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 7932038 - 7931971
Alignment:
Q  119 gtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcat 186  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||| || ||||||    
T  7932038 gtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagtcccttctaggggagtcat 7931971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 3703045 - 3703107
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcat 186  Q
    ||||||||||||||||||||||| || |||||||||||||||||||| |||||||| ||||||    
T  3703045 aacgatggaattttggattttgaaggacggagtcccataagaagtcatttctaagggagtcat 3703107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 116 - 283
Target Start/End: Original strand, 31582212 - 31582369
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtccttaannnnnnnnnatcttctg 215  Q
    ||||||| ||||||||||||||||||||||||||||||| | ||| |||||||| |||||||||||   ||||||||| || |          | |||||    
T  31582212 tgggtctaaacgatggaattttggattttgaggggcggaat-ccaaaagaagtcccttctaaggaa---atcatggtctttgaattt------ttttctg 31582301  T
Q  216 gggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    || | ||||||||||||||||||||| || ||| ||||    ||||||||||||||||||||||||||    
T  31582302 ggcaagtttcggagcaatccgatcaattagcccgaaaactagatttttgactaagaacatgtaacaat 31582369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 128 - 283
Target Start/End: Original strand, 27741907 - 27742060
Alignment:
Q  128 atggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtccttaannnnnnnnnatcttctggggaggtttcgg 227  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||| || || ||| ||  |||  ||         || ||| ||||| |||||||    
T  27741907 atggaattttggattttgaggggcggagtcccataagaagttccttctacgggaggcatgatcctcc--aattttttctgattttcgggggatgtttcgg 27742004  T
Q  228 agcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||||| ||||| ||| |||| || ||||||||||||||| ||||| ||||    
T  27742005 agcaatccgattaagtagcccgaaaacccgatttttgactaagaaaatgtaccaat 27742060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 53893808 - 53893868
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    ||||||| ||||||| |||||||||||||||||||||||| ||||||||||||| ||||||    
T  53893808 tgggtctaaacgatgaaattttggattttgaggggcggagacccataagaagtcccttcta 53893868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 116 - 283
Target Start/End: Complemental strand, 19835905 - 19835740
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| ||| |||||||||||||||||||||||||||||||| ||||||||| ||| || || ||   ||||||| ||| ||         || ||||    
T  19835905 tgggtctaaacaatggaattttggattttgaggggcggagtcccgtaagaagtcccttttaggggag---tcatggtacttgaattttttctgattttct 19835809  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||| | ||||||||||||||||||||||||  || |||| || | |||||||||| |||| ||||||||    
T  19835808 gggaaagtttcggagcaatccgatcaagtagtccgaaaacccgacttttgactaaaaacaggtaacaat 19835740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 140 - 283
Target Start/End: Complemental strand, 32442171 - 32442030
Alignment:
Q  140 attttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctggggaggtttcggagcaatccgat 238  Q
    ||||||||||||| | |||||||||||||| ||||||||| ||||||   ||||||| ||         || ||||||||| ||||| ||||||||||||    
T  32442171 attttgaggggcgaaatcccataagaagtctcttctaagggagtcat---ggtccttgaattttttctgattttctggggaagtttcagagcaatccgat 32442075  T
Q  239 caagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||||| ||| ||||  | ||||||||||||||||| ||||||||    
T  32442074 caagtagcccgaaaactcgatttttgactaagaacaggtaacaat 32442030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 283
Target Start/End: Original strand, 2505916 - 2505978
Alignment:
Q  221 gtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||||||||||||||||||||||| ||| |||| || ||| ||||||||||||||||||||||    
T  2505916 gtttcggagcaatccgatcaagtagcccgaaaacccgattattgactaagaacatgtaacaat 2505978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 48318846 - 48318904
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttc 174  Q
    ||||||| |||||||||||||||||||||||||||||||||||  ||||||||| ||||    
T  48318846 tgggtctaaacgatggaattttggattttgaggggcggagtcctgtaagaagtcccttc 48318904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 49001345 - 49001407
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcat 186  Q
    ||||||| ||||||||||||||||| |||||||||| ||||||||| ||||||||| ||||||    
T  49001345 aacgatgtaattttggattttgaggagcggagtcccgtaagaagtcccttctaagggagtcat 49001407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 52089628 - 52089579
Alignment:
Q  127 gatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  52089628 gatggaattttggattttgaggggcggagtcccgtaagaagtcccttcta 52089579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 184
Target Start/End: Original strand, 4936504 - 4936572
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    ||||||| || |||| |||||||||||||||||| ||||||||||||||||||  ||||||||| ||||    
T  4936504 tgggtctaaaagatgaaattttggattttgagggacggagtcccataagaagtatcttctaagggagtc 4936572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 47456892 - 47456820
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||| |||||||||||||| ||||||||| ||| |||| | |||||||||||||||| || |||||||    
T  47456892 ttctggggaagtttcggagcaatctgatcaagtagcccgaaaaccgaatttttgactaagaatatctaacaat 47456820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 47456982 - 47456930
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    |||||||||||||||||||||||||| |||||| |||||||||||| ||||||    
T  47456982 aacgatggaattttggattttgagggacggagttccataagaagtctcttcta 47456930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 52089477 - 52089405
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||| |||| | |||||||||||||||||  ||||||| || ||||||||||||||||| ||||||||    
T  52089477 ttctggggaagttttgaagcaatccgatcaagtagtccaaaaacccgatttttgactaagaacaggtaacaat 52089405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 55052493 - 55052565
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||| |||| ||||||||||||||| |||||||| ||| ||||| | ||||||||||||||||| ||||||||    
T  55052493 ttctagggaagtttcggagcaatccaatcaagtagcccgaaaattcgatttttgactaagaacaggtaacaat 55052565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 283
Target Start/End: Complemental strand, 49397396 - 49397232
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| ||| ||| |||||||||||||||||||| || |||||||||||||  ||||| ||| ||   ||||||||||| ||         || || |    
T  49397396 tgggtctaaacaatgaaattttggattttgaggggccgaatcccataagaagtttcttcttagggag---tcatggtccttgaattttttctgat-tttt 49397301  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
     |||| ||||| |||||||||||||||||| | | |||| || ||||||||||||||||||||||||||    
T  49397300 tgggaagtttcagagcaatccgatcaagtagctcgaaaacccgatttttgactaagaacatgtaacaat 49397232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 14473997 - 14474055
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttc 174  Q
    ||||||| ||||||| |||||||||| ||||||||||||||||| ||||||||| ||||    
T  14473997 tgggtctaaacgatgaaattttggatcttgaggggcggagtcccgtaagaagtcccttc 14474055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 186
Target Start/End: Original strand, 18050972 - 18051041
Alignment:
Q  117 gggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcat 186  Q
    |||||| ||||||||||||||||||||||||||||||| |||| ||| ||||  |||||| || ||||||    
T  18050972 gggtctaaacgatggaattttggattttgaggggcggaatcccgtaaaaagttccttctacgggagtcat 18051041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 34973249 - 34973196
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtc 169  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||  ||||||||    
T  34973249 tgggtctaaacaatggaattttggattttgaggggcggagtcccgaaagaagtc 34973196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 5803210 - 5803262
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagt 168  Q
    ||||||| ||||||||||||||| |||||| |||| |||||||||||||||||    
T  5803210 tgggtctaaacgatggaattttgaattttgtggggtggagtcccataagaagt 5803262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 6003457 - 6003525
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcat 186  Q
    ||||| ||| || ||||||||||||||||||||||||||||| ||||||| | ||| || |||||||||    
T  6003457 ggtctaaacaatagaattttggattttgaggggcggagtcccgtaagaagccccttttatggaagtcat 6003525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 6228704 - 6228760
Alignment:
Q  227 gagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||||||||| || ||| |||| |||||||||||||||||||| ||||||||    
T  6228704 gagcaatccgatcaaatagcccgaaaacccaatttttgactaagaacaggtaacaat 6228760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 20083355 - 20083303
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagt 168  Q
    ||||||| ||||||||||||||||||||||||| ||||| ||||| |||||||    
T  20083355 tgggtctaaacgatggaattttggattttgaggagcggaatcccacaagaagt 20083303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 169
Target Start/End: Complemental strand, 32601221 - 32601170
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtc 169  Q
    ||||| |||||||||||||||||||||||| |||||||||||  ||||||||    
T  32601221 ggtctaaacgatggaattttggattttgagcggcggagtcccccaagaagtc 32601170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 37222348 - 37222285
Alignment:
Q  117 gggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaagga 180  Q
    |||||| |||| |||||||||||||||||||||| |||||| | ||||||||  ||||||||||    
T  37222348 gggtctaaacgttggaattttggattttgaggggaggagtctcgtaagaagttccttctaagga 37222285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 38417174 - 38417116
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    ||||| ||||||| ||||||||||||||| |||||||||||  ||||||||| ||||||    
T  38417174 ggtctaaacgatgaaattttggattttgaagggcggagtcctgtaagaagtcccttcta 38417116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 283
Target Start/End: Original strand, 49001446 - 49001507
Alignment:
Q  222 tttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||||||||||||||||| ||| ||||||  ||||||||||| |||||  |||||||    
T  49001446 tttcggagcaatccgatcaagtagcccgaaaatcagatttttgactatgaacagttaacaat 49001507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 53836074 - 53836119
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtc 169  Q
    |||||| ||||||||||||||||||| ||||||||| |||||||||    
T  53836074 aacgatagaattttggattttgagggacggagtcccgtaagaagtc 53836119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 372298 - 372238
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    |||||||  |||||| ||||||||||| |||||||| ||||||||| ||| ||||||||||    
T  372298 aacgatgatattttgaattttgaggggaggagtcccgtaagaagtcccttataaggaagtc 372238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 6228595 - 6228647
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagt 168  Q
    ||||||| ||| ||||||||||||||||||||||| |||||||  ||||||||    
T  6228595 tgggtctaaacaatggaattttggattttgaggggaggagtcctgtaagaagt 6228647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 41322875 - 41322934
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    ||||||| ||||||||||| | ||||||||||||||||| |||| ||||||||| ||||||    
T  41322875 tgggtctaaacgatggaatat-ggattttgaggggcggaatcccgtaagaagtctcttcta 41322934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 41322967 - 41323039
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||||||||  |||||||||||||||||||||||  || ||||  |||||||| ||||||||||  |||||||    
T  41322967 ttctggggaactttcggagcaatccgatcaagtatgccgaaaactcaatttttaactaagaacaattaacaat 41323039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 175
Target Start/End: Original strand, 2505821 - 2505872
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtcacttct 175  Q
    |||||| ||||||||||||||||||||| || |||| ||||||||| |||||    
T  2505821 aacgatagaattttggattttgaggggcagaatcccgtaagaagtcccttct 2505872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 283
Target Start/End: Original strand, 17932919 - 17933084
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| ||| |||||||||||||||||||| |||||| || | ||||||||   |||||||| ||   ||||||||||| ||         || ||||    
T  17932919 tgggtctaaactatggaattttggattttgagaggcggaatctcttaagaagttctttctaagggag---tcatggtccttgaattttttctgattttct 17933015  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    || || |||||||||||||||||||||||   |  ||||||  |||||| |||||||||| ||||||||    
T  17933016 ggagaagtttcggagcaatccgatcaagtggtctgaaaatctgattttttactaagaacaggtaacaat 17933084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 132 - 175
Target Start/End: Complemental strand, 23524156 - 23524113
Alignment:
Q  132 aattttggattttgaggggcggagtcccataagaagtcacttct 175  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||    
T  23524156 aattttggattttgaggggcgaagtcccataataagtcccttct 23524113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 284
Target Start/End: Original strand, 4936618 - 4936676
Alignment:
Q  226 ggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaatt 284  Q
    |||||||||||||||| || ||||||||||  |||||| ||||||||||  ||||||||    
T  4936618 ggagcaatccgatcaaatagcccaaaaatcagatttttaactaagaacagctaacaatt 4936676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 283
Target Start/End: Original strand, 6003558 - 6003620
Alignment:
Q  221 gtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| ||||||||| |||||||| ||| |||| |  ||||||||||||||||| ||||||||    
T  6003558 gtttcagagcaatccaatcaagtagcccgaaaacctgatttttgactaagaacaagtaacaat 6003620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 283
Target Start/End: Original strand, 53893910 - 53893972
Alignment:
Q  221 gtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| ||||||||||||||||||  |  |||| || ||||||||||||||||| ||||||||    
T  53893910 gtttcagagcaatccgatcaagtagtctgaaaacccgatttttgactaagaacaggtaacaat 53893972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 41412976 - 41413045
Alignment:
Q  214 tggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||||| ||||| || ||||| ||||||||| ||| |||| |  |||||||| |||||||||||||||||    
T  41412976 tggggaagtttcagaacaatctgatcaagtagcccgaaaaccagatttttgattaagaacatgtaacaat 41413045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 154
Target Start/End: Complemental strand, 47072371 - 47072334
Alignment:
Q  117 gggtctgaacgatggaattttggattttgaggggcgga 154  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  47072371 gggtctaaacgatggaattttagattttgaggggcgga 47072334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 272
Target Start/End: Original strand, 48318939 - 48319000
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaa 272  Q
    |||||||||  ||||| |||||||||||||||||  || ||||||| |||||| ||||||||    
T  48318939 ttctggggaaatttcgaagcaatccgatcaagtagtccgaaaatccgattttttactaagaa 48319000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 177
Target Start/End: Original strand, 48629348 - 48629409
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaa 177  Q
    ||||||| || |||||||||||  ||||||||||||||| || | ||||||||| |||||||    
T  48629348 tgggtctaaatgatggaattttaaattttgaggggcggaatctcgtaagaagtcccttctaa 48629409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 38536463 - 38536391
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||| | |||| ||| ||||||||||||||| ||  ||||    ||||||||||||||||||||||||||    
T  38536463 ttctgggaaagttttggaacaatccgatcaagtagcctgaaaacttgatttttgactaagaacatgtaacaat 38536391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 48095644 - 48095704
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    ||||||| | ||||||||||| |||||||||  |||||||||||  |||||||| ||||||    
T  48095644 tgggtctaatcgatggaatttcggattttgaaaggcggagtcccgcaagaagtcccttcta 48095704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 5e-28; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 116 - 283
Target Start/End: Original strand, 4508084 - 4508249
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||  || ||   ||||||||||| ||         || ||||    
T  4508084 tgggtctaaacgatggaattttggattttgaggggcggagtcccttaagaagtctcttctgtgggag---tcatggtccttgaattgtttctgattttct 4508180  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    | ||| ||||||||||||||| |||||||| ||| |||| || ||||||||||||||||||||||||||    
T  4508181 gcggaagtttcggagcaatccaatcaagtagcccgaaaacccgatttttgactaagaacatgtaacaat 4508249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 283
Target Start/End: Original strand, 2813004 - 2813171
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtccttaannnnnnnnn---atctt 212  Q
    ||||||| ||||||| ||||||||||||||||||| ||||||||||||||||||  |||||||| ||||||   ||||||| |            || ||    
T  2813004 tgggtctaaacgatgaaattttggattttgaggggtggagtcccataagaagtccattctaagggagtcat---ggtccttgaattttttttctgatttt 2813100  T
Q  213 ctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||| |||||||||||||||||||||||| ||| |||| || ||||||||||||||||| ||||||||    
T  2813101 ctggggaagtttcggagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaggtaacaat 2813171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 116 - 283
Target Start/End: Original strand, 21514813 - 21514978
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt--aannnnnnnnnatcttc 213  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||    ||| |||||  |          || ||     
T  21514813 tgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagtcccttctaagggagt----atgatccttgaatttttttctaatttta 21514908  T
Q  214 tggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||||| ||||||||||||||||||||||||  || ||||||| ||||||||||||||||| ||||||||    
T  21514909 tggggaagtttcggagcaatccgatcaagtagtccgaaaatccgatttttgactaagaacaggtaacaat 21514978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 283
Target Start/End: Complemental strand, 17264778 - 17264622
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtccttaannnnnnnnnatcttctggggaggtt 223  Q
    ||||||| |||||||||||||||||| || |||||| ||||||||| |||||| || ||||||   ||||||| |         || ||||||||| |||    
T  17264778 aacgatgaaattttggattttgagggacgaagtcccgtaagaagtcccttctaggggagtcat---ggtccttgaatttttctgattttctggggaagtt 17264682  T
Q  224 tcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||||||||||| |||||||| ||||||||  |||||||| |||||||||| ||||||||    
T  17264681 tcggagcaatcccatcaagtagcccaaaaactcaatttttaactaagaacaggtaacaat 17264622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 116 - 283
Target Start/End: Original strand, 3717064 - 3717229
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| |||  ||||||||||||||||||||||||||||||| ||||||||| |||||| || || |||   ||||||| ||         || || |    
T  3717064 tgggtctaaacagtggaattttggattttgaggggcggagtcccgtaagaagtctcttctaggggagccat---ggtccttgaattttttctgatttttt 3717160  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| ||||||||||||||||||||||||  |  |||| || ||||||||||||||||||||||||||    
T  3717161 ggggatgtttcggagcaatccgatcaagtagtctgaaaacccgatttttgactaagaacatgtaacaat 3717229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 128 - 283
Target Start/End: Original strand, 14587355 - 14587507
Alignment:
Q  128 atggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctggggaggtttcg 226  Q
    |||||||||||||||||||| ||||||||||| ||||||||  ||||||||| |||| |   ||||||| ||         || ||||||| || |||||    
T  14587355 atggaattttggattttgagtggcggagtcccgtaagaagttccttctaagggagtctt---ggtccttgaattttttctaattttctgggaag-tttcg 14587450  T
Q  227 gagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
     |||||||| |||||||| |||||||||||| ||||| |||||||||||||||||||    
T  14587451 aagcaatccaatcaagtagcccaaaaatccatttttttactaagaacatgtaacaat 14587507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 124 - 186
Target Start/End: Complemental strand, 5639230 - 5639168
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcat 186  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||| | ||||||    
T  5639230 aacgatggaattttggattttgaggggcggagtcccgtaagaagtctcttctaaaggagtcat 5639168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 179
Target Start/End: Complemental strand, 237173 - 237112
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaagg 179  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||| | |||||||||    
T  237173 ggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagacccttctaagg 237112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 2539825 - 2539768
Alignment:
Q  119 gtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    |||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  2539825 gtctaaacgattgaattttggattttgaggggcggagtcccgtaagaagtcacttcta 2539768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 5699973 - 5699923
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagt 168  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  5699973 ggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagt 5699923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 9905438 - 9905388
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagt 168  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  9905438 ggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagt 9905388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 168
Target Start/End: Original strand, 1945365 - 1945416
Alignment:
Q  117 gggtctgaacgatggaattttggattttgaggggcggagtcccataagaagt 168  Q
    |||||| |||| ||||||||||||||||||||||||||||||| ||||||||    
T  1945365 gggtctaaacgttggaattttggattttgaggggcggagtcccgtaagaagt 1945416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 174
Target Start/End: Complemental strand, 7413144 - 7413086
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttc 174  Q
    ||||||| ||||||| ||||||||||||||||||||||| || | ||||||||||||||    
T  7413144 tgggtctaaacgatgaaattttggattttgaggggcggaatcacctaagaagtcacttc 7413086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 283
Target Start/End: Original strand, 13800912 - 13800974
Alignment:
Q  221 gtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||||||||||||||||||   ||||||||| |||||||||||||||||  |||||||    
T  13800912 gtttcggagcaatccgatcaagtagttcaaaaatccgatttttgactaagaacaactaacaat 13800974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 184
Target Start/End: Complemental strand, 16450593 - 16450527
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    ||||| ||||||||||||||||||||||| |||||||||| |||||| |||| ||| |||| |||||    
T  16450593 ggtctaaacgatggaattttggattttgatgggcggagtctcataagtagtcccttttaagaaagtc 16450527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 283
Target Start/End: Original strand, 24604144 - 24604308
Alignment:
Q  117 gggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctg 215  Q
    |||||| |||| ||||||||||||||||||| |||||||| ||  |||||||| ||||||||| ||   ||||| ||||| ||         || ||||     
T  24604144 gggtctaaacggtggaattttggattttgagaggcggagttccgcaagaagtcccttctaagggag---tcatgatccttgaatttttttttattttcta 24604240  T
Q  216 gggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||| |||| | ||||||  ||||||||| |||||||| || ||||||||||||||||| ||||||||    
T  24604241 gggatgtttagaagcaatgtgatcaagtagcccaaaaacccgatttttgactaagaacaggtaacaat 24604308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 29630749 - 29630806
Alignment:
Q  119 gtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    |||| ||||||| |||||||||||||||||||| | ||||||||||||||| ||||||    
T  29630749 gtctaaacgatgaaattttggattttgaggggcagggtcccataagaagtctcttcta 29630806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 5699850 - 5699778
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||| ||||||||||||||||||||||||  || |||  || ||||||||||||||| | ||||||||    
T  5699850 ttctggggaagtttcggagcaatccgatcaagtagtccgaaatcccgatttttgactaagaataggtaacaat 5699778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 272
Target Start/End: Complemental strand, 9905389 - 9905338
Alignment:
Q  221 gtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaa 272  Q
    |||||||||||||||||||||||| ||| |||| || |||||||||||||||    
T  9905389 gtttcggagcaatccgatcaagtagcccgaaaacccgatttttgactaagaa 9905338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 16450488 - 16450426
Alignment:
Q  221 gtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||||| ||||||| ||||||||| |||||||| | ||||||||||||||||||  |||||||    
T  16450488 gtttcgaagcaatctgatcaagtagcccaaaaaccaaatttttgactaagaacagctaacaat 16450426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 30880194 - 30880149
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtc 169  Q
    |||||||||||||||||||||||| | |||||| ||||||||||||    
T  30880194 aacgatggaattttggattttgagtgacggagttccataagaagtc 30880149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 29289500 - 29289572
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||| |||||||||||||  ||||||||| | | |||| |  |||||||||||||||||| |||||||    
T  29289500 ttctggggaagtttcggagcaatttgatcaagtagcacgaaaacctgatttttgactaagaacatctaacaat 29289572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 283
Target Start/End: Original strand, 1945423 - 1945477
Alignment:
Q  229 gcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||||||| |||||| ||||||| |||||||| ||| |||| ||||||||    
T  1945423 gcaatccgatcaaataacccgaaaatccgatttttgaataaaaacaggtaacaat 1945477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 154
Target Start/End: Complemental strand, 7416163 - 7416125
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcgga 154  Q
    ||||||| |||||| ||||||||||||||||||||||||    
T  7416163 tgggtctaaacgattgaattttggattttgaggggcgga 7416125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 14037755 - 14037800
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtc 169  Q
    ||||||||||| ||||||||||||| || ||||||| |||||||||    
T  14037755 aacgatggaatgttggattttgaggagcagagtcccgtaagaagtc 14037800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 279
Target Start/End: Complemental strand, 23407081 - 23407013
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaa 279  Q
    ||||||||| ||||||||||||||  |||||||| ||| ||||    ||||||||||||||||| ||||    
T  23407081 ttctggggaagtttcggagcaatcaaatcaagtagcccgaaaacttgatttttgactaagaacaagtaa 23407013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 29519563 - 29519491
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| ||| |||||||||||||  ||||||||| | | |||| || ||||||||| ||||||| ||||||||    
T  29519563 ttctgaggaagtttcggagcaatttgatcaagtagctcgaaaacccgatttttgaccaagaacacgtaacaat 29519491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 8e-27; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 124 - 281
Target Start/End: Complemental strand, 28873375 - 28873220
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctggggaggt 222  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||| || ||||||   | ||||| ||         || ||||||||| ||    
T  28873375 aacgatggaattttggattttgaggggcggagtcccgtaagaagtctcttctaggggagtcat---gttccttgaattttttctaattttctggggaagt 28873279  T
Q  223 ttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaaca 281  Q
    |||||||||||||||||||||| ||| |||| || ||||||||||||||||| ||||||    
T  28873278 ttcggagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaagtaaca 28873220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 118 - 283
Target Start/End: Complemental strand, 50716628 - 50716465
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtccttaannnnnnnnn-atcttctgg 216  Q
    ||||| || |||||||||||||||||||||||||||| |||| ||||||||| ||||||  | ||||||   ||||||| |          || ||||||    
T  50716628 ggtctaaaggatggaattttggattttgaggggcggaatcccgtaagaagtctcttctagaggagtcat---ggtccttgagttttttctgattttctgg 50716532  T
Q  217 ggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||| |||||||||||||||||||||||| ||| |||| || ||||||||||||||||| ||||||||    
T  50716531 ggaagtttcggagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaagtaacaat 50716465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 118 - 283
Target Start/End: Original strand, 50796219 - 50796382
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtccttaannnnnnnnn-atcttctgg 216  Q
    ||||| || |||||||||||||||||||||||||||| |||| ||||||||| ||||||  | ||||||   ||||||| |          || ||||||    
T  50796219 ggtctaaaggatggaattttggattttgaggggcggaatcccgtaagaagtctcttctagaggagtcat---ggtccttgagttttttctgattttctgg 50796315  T
Q  217 ggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||| |||||||||||||||||||||||| ||| |||| || ||||||||||||||||| ||||||||    
T  50796316 ggaagtttcggagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaagtaacaat 50796382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 116 - 283
Target Start/End: Complemental strand, 35142450 - 35142286
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| ||||||||||||||||||||| |||||||||| ||| ||||||||| |||||| || ||   ||||||||||| ||         || ||||    
T  35142450 tgggtctaaacgatggaattttggatttttaggggcggagccccgtaagaagtcccttctacgggag---tcatggtccttgaattttttctgattttct 35142354  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
     |||| |||||||||||||||||||||||| ||| |||| ||| ||||||||||||||||  |||||||    
T  35142353 -gggaagtttcggagcaatccgatcaagtagcccgaaaacccagtttttgactaagaacagataacaat 35142286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 116 - 283
Target Start/End: Complemental strand, 51258781 - 51258616
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| ||||||| |||||||||||||||||||||||||||| ||||||||| |||||| || ||   ||||| ||||| ||         || ||||    
T  51258781 tgggtctaaacgatgaaattttggattttgaggggcggagtcccgtaagaagtcccttctacgggag---tcatgatccttgaattttttctgattttct 51258685  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||| | |||||||||||||||||||||||   || ||||  | ||||||||||||||||||||||||||    
T  51258684 gggaaagtttcggagcaatccgatcaagttgtccgaaaactcgatttttgactaagaacatgtaacaat 51258616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 283
Target Start/End: Original strand, 3351856 - 3352013
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtccttaannnnnnnnnatcttctggggaggtt 223  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||| || ||||||  ||  ||| ||         || |||| |||| |||    
T  3351856 aacgatggaattttagattttgaggggcggagtcccataagaagtcccttctacgggagtcat--tgtccctgaattttttctgattttctagggaagtt 3351953  T
Q  224 tcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||||||||||||||| ||  |||| || |||||| |||||||||  ||||||||    
T  3351954 tcggagcaatccgatcaagtagcctgaaaaccctattttttactaagaaccggtaacaat 3352013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 35345784 - 35345856
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||| ||||||||||||||||||||| |||||| |||| ||||||||||||||||||||  |||||||    
T  35345784 ttctggggaagtttcggagcaatccgatcaattaacccgaaaacccaatttttgactaagaacaactaacaat 35345856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 283
Target Start/End: Original strand, 2358404 - 2358569
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| ||| |||||||||| |||||||||||||| |||||| ||||||||| |||||| || ||   ||||||||||| ||         || || |    
T  2358404 tgggtctaaacaatggaattttagattttgaggggcgtagtcccgtaagaagtcccttctaggggag---tcatggtccttgaattttttctgatttttt 2358500  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| ||||| ||||||| |||||||||| |||||||| || ||||||||||||||| ||| ||||||    
T  2358501 ggggaagtttcagagcaattcgatcaagtagcccaaaaacccgatttttgactaagaatatgcaacaat 2358569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 283
Target Start/End: Original strand, 3902596 - 3902753
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctggggaggt 222  Q
    |||||| ||||||||||||||||||||||||||||| |||||| |  |||||||||  |||||   ||||||| ||         || ||||||| | ||    
T  3902596 aacgattgaattttggattttgaggggcggagtcccgtaagaaattccttctaagggtgtcat---ggtccttgaattttttctgattttctgggcaagt 3902692  T
Q  223 ttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||| ||||||||||||||||||| |  |||| || ||||||||||||||||||||||||||    
T  3902693 ttccgagcaatccgatcaagtaatctgaaaacccgatttttgactaagaacatgtaacaat 3902753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 283
Target Start/End: Original strand, 46622577 - 46622742
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| ||||||||||||||||||| |||||||||||||||| |||||| |   ||||| || ||| ||   ||||||| ||         || ||||    
T  46622577 tgggtctaaacgatggaattttggattctgaggggcggagtcccgtaagaaattgattctatgggagtgat---ggtccttgaattttttctgattttct 46622673  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||| | ||||||||||||||||||||||||  || ||||||| ||||||||||||||||| ||||||||    
T  46622674 gggaaagtttcggagcaatccgatcaagtagtccgaaaatccgatttttgactaagaacaagtaacaat 46622742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 34821125 - 34821185
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    ||||||| ||||||||||||||||||||||||||||||| |||| ||||||||| ||||||    
T  34821125 tgggtctaaacgatggaattttggattttgaggggcggactcccgtaagaagtcccttcta 34821185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 500970 - 501028
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    ||||| ||||||||||||||||||||||||||||||||| || ||||||||| ||||||    
T  500970 ggtctaaacgatggaattttggattttgaggggcggagtgccgtaagaagtcccttcta 501028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 47302396 - 47302326
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcat 186  Q
    ||||||| ||| |||||||||||||||||||||||| ||||||| ||||||||| |||||| || ||||||    
T  47302396 tgggtctaaacaatggaattttggattttgaggggcagagtcccgtaagaagtcccttctatgggagtcat 47302326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 51540409 - 51540479
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcat 186  Q
    ||||||| ||||||||| |||||||||||||||||| || |||||| ||||||| ||||||||| ||||||    
T  51540409 tgggtctaaacgatggagttttggattttgaggggcagaatcccatgagaagtcccttctaagggagtcat 51540479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 3938463 - 3938394
Alignment:
Q  214 tggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||||| ||||| |||||||||||||||||||||| |||| |  ||||||||||||||||| ||||||||    
T  3938463 tggggaagtttcagagcaatccgatcaagtaacccgaaaaccagatttttgactaagaacaggtaacaat 3938394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 29048707 - 29048654
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtc 169  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||| |||||    
T  29048707 tgggtctaaacgatggaattttggattttgaggggcggagtcccgtaataagtc 29048654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 38977538 - 38977599
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtca 185  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||| |||||| || |||||    
T  38977538 aacgatgaaattttggattttgaggggcggagtcccacaagaagtcccttctacgggagtca 38977599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 52777512 - 52777443
Alignment:
Q  214 tggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||||| ||||| |||||||||||||||||| ||| |||| || ||||||||||||||||||||| ||||    
T  52777512 tggggaagtttcagagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacatgtagcaat 52777443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 43472762 - 43472810
Alignment:
Q  128 atggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  43472762 atggaattttggattttgaggggcggagtcccgtaagaagtcccttcta 43472810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 49095999 - 49096059
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    ||||||| |||||||||||||||||||||||||| |||||||||  |||||||| ||||||    
T  49095999 tgggtcttaacgatggaattttggattttgagggacggagtccctcaagaagtctcttcta 49096059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 281
Target Start/End: Complemental strand, 39150179 - 39150023
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| ||||||||||||||||||||||||||       ||| ||||||||| ||||||||||||||||   ||||||| ||         || ||||    
T  39150179 tgggtctaaacgatggaattttggattttgaggg-------cccgtaagaagtcccttctaaggaagtcat---ggtccttgaattttttctgattttct 39150090  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaaca 281  Q
    ||||| ||||||||||||| ||| |||||| ||| |||| ||  ||||| |||||||||||||||||    
T  39150089 ggggaagtttcggagcaattcgaccaagtagcccgaaaacccggtttttaactaagaacatgtaaca 39150023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 186
Target Start/End: Complemental strand, 4394355 - 4394286
Alignment:
Q  117 gggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcat 186  Q
    |||||| ||||||||||||||||||||||||||||||| |||| ||| ||||  |||||| || ||||||    
T  4394355 gggtctaaacgatggaattttggattttgaggggcggaatcccgtaaaaagttccttctacgggagtcat 4394286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 19419787 - 19419727
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    ||||| ||| ||||||||||||||||||||| ||| |||||||||| ||||||| ||||||    
T  19419787 aacgaaggagttttggattttgaggggcggaatcctataagaagtctcttctaaagaagtc 19419727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 35345699 - 35345751
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    |||| ||||||||||||||||||||||||||||||| | ||||||| ||||||    
T  35345699 aacggtggaattttggattttgaggggcggagtcccgttagaagtcccttcta 35345751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 47123310 - 47123238
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||| | |||||||||||||||||||||||| ||| ||||| |  ||||| |||||||||| ||||||||    
T  47123310 ttctgggcaagtttcggagcaatccgatcaagtagcccgaaaattcggtttttaactaagaacaggtaacaat 47123238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 47130676 - 47130604
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||| | |||||||||||||||||||||||| ||| ||||| |  ||||| |||||||||| ||||||||    
T  47130676 ttctgggcaagtttcggagcaatccgatcaagtagcccgaaaattcggtttttaactaagaacaggtaacaat 47130604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 14828700 - 14828758
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    ||||| |||||||||||||||||||||||  ||||||||||  ||||||||| ||||||    
T  14828700 ggtctaaacgatggaattttggattttgaaaggcggagtcctgtaagaagtctcttcta 14828758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 33439564 - 33439494
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcat 186  Q
    ||||||| |||||||||||||||||||||| |||||||||| || ||| ||||| ||| || || ||||||    
T  33439564 tgggtctaaacgatggaattttggattttgtggggcggagttccgtaacaagtcccttttatgggagtcat 33439494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 168
Target Start/End: Complemental strand, 41300985 - 41300935
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagt 168  Q
    ||||| |||||||||||||| |||||||| |||||||||||| ||||||||    
T  41300985 ggtctaaacgatggaatttttgattttgatgggcggagtcccgtaagaagt 41300935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 47302292 - 47302230
Alignment:
Q  221 gtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| || ||||||||||||||| ||| ||||  | ||||||||||||||||||||||||||    
T  47302292 gtttcagaacaatccgatcaagtagcccgaaaactcgatttttgactaagaacatgtaacaat 47302230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 269
Target Start/End: Original strand, 47739808 - 47739866
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaa 269  Q
    ||||||||| |||| ||||||||||||||||||| ||| |||| ||||||||| |||||    
T  47739808 ttctggggaagttttggagcaatccgatcaagtagcccgaaaacccaatttttaactaa 47739866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 269
Target Start/End: Original strand, 30721690 - 30721743
Alignment:
Q  216 gggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaa 269  Q
    |||| |||||||||||||||||||||||| | | |||| |||||||||||||||    
T  30721690 gggaagtttcggagcaatccgatcaagtagctcgaaaacccaatttttgactaa 30721743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 34009887 - 34009936
Alignment:
Q  127 gatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    ||||||||||||||||||| ||||||||||| | ||||||||| ||||||    
T  34009887 gatggaattttggattttggggggcggagtcacgtaagaagtcccttcta 34009936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 43472847 - 43472916
Alignment:
Q  214 tggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||||| ||||| ||| |||||||||||||| ||| |||| || |||||||||||||||||  |||||||    
T  43472847 tggggaagtttcagagtaatccgatcaagtagcccgaaaacccgatttttgactaagaacagataacaat 43472916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 51493084 - 51493011
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaa-tttttgactaagaacatgtaacaat 283  Q
    ||||||||| |||||||||||||| |||||||||  ||||||| |||| ||||| ||||||||||  |||||||    
T  51493084 ttctggggaagtttcggagcaatctgatcaagtaggccaaaaacccaatttttttactaagaacagctaacaat 51493011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 33439465 - 33439393
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||| | ||||||||||||||||||||||||  || ||||||  |||||| |||||||| | ||||||||    
T  33439465 ttctgggcaagtttcggagcaatccgatcaagtagtccgaaaatctgatttttaactaagaaaaagtaacaat 33439393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 49096105 - 49096173
Alignment:
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| |||| ||||||||||||||||||| ||| ||||  | ||||||||| ||||||| ||||||||    
T  49096105 ggggaagttttggagcaatccgatcaagtagcccgaaaactcgatttttgacgaagaacaggtaacaat 49096173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 155
Target Start/End: Original strand, 30721616 - 30721655
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggag 155  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  30721616 tgggtctaaacgatgaaattttggattttgaggggcggag 30721655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 45244672 - 45244606
Alignment:
Q  117 gggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    |||||| || |||||||||||||||||||| |||||||||| | |||||||||  |||||||| ||||    
T  45244672 gggtctaaatgatggaattttggattttga-gggcggagtctcgtaagaagtcctttctaagggagtc 45244606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 45711886 - 45711929
Alignment:
Q  135 tttggattttgaggggcggagtcccataagaagtcacttctaag 178  Q
    |||||||||||||||| |||||||| ||||||||| ||||||||    
T  45711886 tttggattttgaggggtggagtcccgtaagaagtcccttctaag 45711929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 130 - 185
Target Start/End: Original strand, 47739729 - 47739784
Alignment:
Q  130 ggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtca 185  Q
    ||||||||| ||||||||||||||||||||  |||||||| |||||| || |||||    
T  47739729 ggaattttgaattttgaggggcggagtccccaaagaagtctcttctatgggagtca 47739784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 29036181 - 29036128
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtc 169  Q
    ||||||| ||||||| |||||| ||||||||||||| ||||||| || ||||||    
T  29036181 tgggtctaaacgatgaaattttagattttgaggggcagagtcccgtaggaagtc 29036128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 45244870 - 45244822
Alignment:
Q  128 atggaattttggattttgaggggcggagtcccataagaagtcacttctaa 177  Q
    ||||||||||||||||||| ||| |||||||| ||||||||| |||||||    
T  45244870 atggaattttggattttga-gggtggagtcccgtaagaagtctcttctaa 45244822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 184
Target Start/End: Complemental strand, 32025252 - 32025194
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    ||||||||||||| ||||||||| ||| ||||||||||||||| || ||||||||| ||||    
T  32025252 aacgatggaatttgggattttga-gggtggagtcccataagaa-tcccttctaagggagtc 32025194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 34821218 - 34821290
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||| ||||| |||| ||||||||||||| ||  |||| ||  ||||| |||||||||| ||||||||    
T  34821218 ttctggggaagtttcagagcgatccgatcaagtagcctgaaaacccgctttttaactaagaacaggtaacaat 34821290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 283
Target Start/End: Original strand, 11698098 - 11698263
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||| ||| |||||| || ||   ||||||||||| ||         || ||||    
T  11698098 tgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagacgtcccttctatgggag---tcatggtccttgaattttttctgattttct 11698194  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| ||||||||||| |||||||||||| ||| |||| || |||||||||||||||||  |||||||    
T  11698195 ggggaagtttcggagcattccgatcaagtagcccgaaaacccgatttttgactaagaacagataacaat 11698263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 283
Target Start/End: Original strand, 42280673 - 42280838
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| |||||||||||||||||||||||||||||||||||  ||||||||| |||||| || ||   | ||||||||| ||         || ||||    
T  42280673 tgggtctaaacgatggaattttggattttgaggggcggagtcctgtaagaagtcccttctaggggag---ttatggtccttgaactttttttgattttct 42280769  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| |||||| || ||||||||||||||  |||||||||| ||||||||||||||||| ||||||||    
T  42280770 ggggaagtttcgaagtaatccgatcaagtagtccaaaaatccgatttttgactaagaacaggtaacaat 42280838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 283
Target Start/End: Complemental strand, 28917149 - 28916987
Alignment:
Q  119 gtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctggg 217  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||  ||||||||| ||   ||||||||||| ||         || |||||||    
T  28917149 gtctaaacaatggaattttggattttgaggggcggagtcccataagaagttccttctaagggag---tcatggtccttgaattttttctgattttctggg 28917053  T
Q  218 gaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    || ||||||||||||||||||||||||  | ||||  | | ||||| || ||||||||||||||||    
T  28917052 gaagtttcggagcaatccgatcaagtagtcgaaaacccgatttttttaccaagaacatgtaacaat 28916987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 283
Target Start/End: Complemental strand, 34853705 - 34853540
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| ||||||||||||||  ||||||||||||||||||||| ||||||||  |||||||| ||   ||||||||||| ||         || || |    
T  34853705 tgggtctaaacgatggaattttttattttgaggggcggagtcccagaagaagtcctttctaagggag---tcatggtccttgaattttttctgattttat 34853609  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| ||||||||||||||||||||||||| || ||||  | |||| || ||||||||| ||||||||    
T  34853608 ggggaagtttcggagcaatccgatcaagtaatccgaaaactcgatttctgcctaagaacaggtaacaat 34853540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 116 - 283
Target Start/End: Original strand, 8885234 - 8885400
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt--aannnnnnnnnatcttc 213  Q
    ||||||| || ||||||||||||||||||||||||||||||||  ||||||||| |||||| || ||   |||||||||||  |          || |||    
T  8885234 tgggtctaaatgatggaattttggattttgaggggcggagtcctgtaagaagtcccttctacgggag---tcatggtccttgaatttttttctgattttc 8885330  T
Q  214 tggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||| | ||||||||||||||||||||||||  || |||| || |||||| |||||||||| ||||||||    
T  8885331 tgggaatgtttcggagcaatccgatcaagtagtccgaaaacccgattttttactaagaacaggtaacaat 8885400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 118 - 283
Target Start/End: Original strand, 14163841 - 14164004
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctgg 216  Q
    ||||| || |||||||||||  |||||||||||||||||||| |||||||| | || ||||| || |||   ||||||| ||         || ||||||    
T  14163841 ggtctaaatgatggaattttttattttgaggggcggagtcccgtaagaagttatttataagggagccat---ggtccttgaattttttctgattttctgg 14163937  T
Q  217 ggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||||||||||||||| ||||||||||| ||| ||||  || |||||||||||||||| ||||||||    
T  14163938 ggaggtttcggagcaaaccgatcaagtaccccgaaaacgcagtttttgactaagaacaggtaacaat 14164004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 283
Target Start/End: Original strand, 31519676 - 31519839
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| ||| |||||||||||||||||||||||  ||||||| ||||| ||| |||||||||  |||||   ||||||| ||         || || |    
T  31519676 tgggtctaaacaatggaattttggattttgagggg--gagtcccgtaagacgtcccttctaagggtgtcat---ggtccttgaattttttctgattttat 31519770  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| ||||| |||||||||||||||||| ||| |||| || ||||||||||||||||| ||||||||    
T  31519771 ggggaagtttcagagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaagtaacaat 31519839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 116 - 283
Target Start/End: Complemental strand, 3095062 - 3094897
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| ||||||| ||||||||||||||||||| |||||| | |||| |||| || ||| || ||||||   ||||||| ||         || ||||    
T  3095062 tgggtctaaacgatgaaattttggattttgaggggtggagtcgcgtaagtagtccctcctatgggagtcat---ggtccttgaattttttatgattttct 3094966  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||| | ||||||||||||||||||||||||  || ||||  | ||||||||||||||||||||||||||    
T  3094965 gggcaagtttcggagcaatccgatcaagtagtccgaaaactcgatttttgactaagaacatgtaacaat 3094897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 36165712 - 36165785
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaaccc-aaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||| |||||||||||||||||||||||| ||| ||||| ||  ||||| |||||||||||||||||||    
T  36165712 ttctggggaagtttcggagcaatccgatcaagtagcccaaaaaacccggtttttaactaagaacatgtaacaat 36165785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 9073788 - 9073716
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| ||| ||||||||||||||| ||||||||  ||||||| || ||||||||||||||||| ||||||||    
T  9073788 ttctgaggaagtttcggagcaatccaatcaagtagtccaaaaacccgatttttgactaagaacaggtaacaat 9073716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 33472353 - 33472286
Alignment:
Q  117 gggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    |||||| ||||||| ||||||| ||||||||||||| |||||| ||||||||| ||||||||| ||||    
T  33472353 gggtctaaacgatgaaattttgaattttgaggggcgtagtcccgtaagaagtctcttctaagggagtc 33472286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 7981890 - 7981825
Alignment:
Q  119 gtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    |||| ||||||||||||||||||||||||||||| ||||| |||| || || ||||||||| ||||    
T  7981890 gtctaaacgatggaattttggattttgaggggcgaagtcctataacaaatcccttctaagggagtc 7981825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 27927819 - 27927888
Alignment:
Q  214 tggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||||| |||||||||||||| |||||||||  || |||| ||||||||| |||||||||| ||||||||    
T  27927819 tggggaagtttcggagcaatctgatcaagtagtccgaaaacccaatttttaactaagaacaggtaacaat 27927888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 36318170 - 36318105
Alignment:
Q  119 gtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    |||| ||||||||||||||  ||||||||||| |||||| |||||||||||| |||||||| ||||    
T  36318170 gtctaaacgatggaattttaaattttgaggggtggagtctcataagaagtcatttctaaggtagtc 36318105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 36980853 - 36980792
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaa 272  Q
    ||||| ||| |||||||||||||||||||||||| ||| ||||||  |||||||||||||||    
T  36980853 ttctgtggaagtttcggagcaatccgatcaagtagcccgaaaatcggatttttgactaagaa 36980792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 40328181 - 40328109
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||| |||| |||| |||||||||||||||||||  || |||| || ||||||||||||||||| ||||||||    
T  40328181 ttctagggaagttttggagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaat 40328109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 131 - 283
Target Start/End: Complemental strand, 44106585 - 44106435
Alignment:
Q  131 gaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctggggaggtttcggag 229  Q
    ||||||||||||||||||| | |||||||||||||||  |||||||||| ||   ||||||||||| |          || || |||||| ||||| |||    
T  44106585 gaattttggattttgagggacagagtcccataagaaggaacttctaagggag---tcatggtccttgattttttttttattttatggggaagtttcagag 44106489  T
Q  230 caatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| ||||||||| | | |||| || ||||||||||||||||| ||||||||    
T  44106488 caatcagatcaagtagcacgaaaacccgatttttgactaagaacaggtaacaat 44106435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 4259464 - 4259514
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaa 166  Q
    ||||||| || ||| ||||||||||||||||||||||||||||| ||||||    
T  4259464 tgggtctaaaggatagaattttggattttgaggggcggagtcccgtaagaa 4259514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 283
Target Start/End: Original strand, 8621522 - 8621584
Alignment:
Q  221 gtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||||||||||||||||||||||| | |||||||   |||||||||||||||||  |||||||    
T  8621522 gtttcggagcaatccgatcaagtagctcaaaaattggatttttgactaagaacaactaacaat 8621584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 283
Target Start/End: Complemental strand, 21004658 - 21004596
Alignment:
Q  221 gtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| |||||||| ||||||||| ||  |||| || ||||||||||||||||||||||||||    
T  21004658 gtttcagagcaatctgatcaagtagccggaaaacccgatttttgactaagaacatgtaacaat 21004596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 31234604 - 31234672
Alignment:
Q  117 gggtctgaacgatggaattttggattttgaggggcggagtcc--cataagaagtcacttctaaggaagtc 184  Q
    |||||| ||||||||||||||||||||||| |||||||||||  | ||||||||| ||||||||| ||||    
T  31234604 gggtctaaacgatggaattttggattttga-gggcggagtcccgcgtaagaagtcccttctaagggagtc 31234672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 9845465 - 9845401
Alignment:
Q  119 gtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    |||| ||||||||||||||  ||||||||||  |||||||| ||||||||| ||||||||||||||    
T  9845465 gtctaaacgatggaattttaaattttgagggatggagtcccgtaagaagtc-cttctaaggaagtc 9845401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 274
Target Start/End: Complemental strand, 28423694 - 28423641
Alignment:
Q  221 gtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaaca 274  Q
    ||||||||| |||||||||||||| ||| |||| | ||||||||||||||||||    
T  28423694 gtttcggagtaatccgatcaagtagcccgaaaaactaatttttgactaagaaca 28423641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 176
Target Start/End: Complemental strand, 40995044 - 40994987
Alignment:
Q  119 gtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    |||| |||||||||||||||||||||||| ||||||||||| ||| || || ||||||    
T  40995044 gtctaaacgatggaattttggattttgagaggcggagtcccgtaataaatcccttcta 40994987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 27927732 - 27927784
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagt 168  Q
    ||||||| ||||||| |||||||||||| |||||| |||||||| ||||||||    
T  27927732 tgggtctaaacgatgaaattttggatttggaggggtggagtcccgtaagaagt 27927784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 169
Target Start/End: Complemental strand, 28423785 - 28423745
Alignment:
Q  129 tggaattttggattttgaggggcggagtcccataagaagtc 169  Q
    |||||||||||||||||||||  ||||||||||||||||||    
T  28423785 tggaattttggattttgagggatggagtcccataagaagtc 28423745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 40328266 - 40328223
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagt 168  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||    
T  40328266 aacgatggaattt-ggattttgaggggcggagtcccgtaagaagt 40328223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 41530942 - 41530891
Alignment:
Q  132 aattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||||||| ||||    
T  41530942 aattttggattttgaggg-cggagtcccgtaagaagtctcttctaagggagtc 41530891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 283
Target Start/End: Original strand, 17119756 - 17119826
Alignment:
Q  213 ctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||| ||||||||| ||||| ||||||||  || |||| ||  |||||||||||||||| ||||||||    
T  17119756 ctggggaagtttcggagaaatccaatcaagtagtccgaaaacccggtttttgactaagaacaggtaacaat 17119826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 165
Target Start/End: Complemental strand, 9073888 - 9073847
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataaga 165  Q
    |||||| ||||||||||||||||||||| ||||||| |||||    
T  9073888 aacgatagaattttggattttgaggggctgagtcccgtaaga 9073847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 24628050 - 24627998
Alignment:
Q  131 gaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    |||||||||||||||| |||||||||| | ||||||||| ||||||||| ||||    
T  24628050 gaattttggattttga-gggcggagtctcgtaagaagtctcttctaagggagtc 24627998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 34645650 - 34645589
Alignment:
Q  222 tttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||||||  ||||||||| ||| |||| |  || |||||||||||||||||||||||    
T  34645650 tttcggagcaatgtgatcaagtagcccgaaaaccggatgtttgactaagaacatgtaacaat 34645589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 6395364 - 6395296
Alignment:
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| ||||| || ||||||||||||||| ||| ||||||  ||||||||||| |||||  |||||||    
T  6395364 ggggatgtttcagaacaatccgatcaagtagcccgaaaatcagatttttgactacgaacagctaacaat 6395296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 36318080 - 36318008
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||| | |||| ||| | ||||||||||||| ||| |||||| ||||| ||||||||||||  |||||||    
T  36318080 ttctgggaaagttttggaactatccgatcaagtagcccgaaaatcgaatttctgactaagaacagctaacaat 36318008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 283
Target Start/End: Complemental strand, 42894754 - 42894589
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||| ||   ||||||||||| ||         || ||||    
T  42894754 tgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagttccttctaagggag---tcatggtccttgaattttttctaattttct 42894658  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| ||||||||| ||||||||||||||  || ||||  | ||||||| ||||||||||||||||||    
T  42894657 ggggaagtttcggagtaatccgatcaagtagtccgaaaactcgatttttgcctaagaacatgtaacaat 42894589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 283
Target Start/End: Original strand, 41510207 - 41510371
Alignment:
Q  117 gggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctg 215  Q
    |||||| ||||||| ||||||||||||||||||| |||||||||||||||||  ||||||||  ||   ||||||||||| ||         || ||||     
T  41510207 gggtctaaacgatgaaattttggattttgaggggtggagtcccataagaagttccttctaagagag---tcatggtccttgaattttttctgattttcta 41510303  T
Q  216 gggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||| |||||||||||||||||||||||| ||| |||| ||| ||||| |||||||||| ||||||||    
T  41510304 gggaagtttcggagcaatccgatcaagtagcccgaaaacccagtttttaactaagaacaagtaacaat 41510371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 116 - 283
Target Start/End: Original strand, 25217551 - 25217716
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| |||||| ||||||||||||||||||||||||||||| ||||||||| |||||| || ||   ||||||||||| ||         || ||||    
T  25217551 tgggtctaaacgatagaattttggattttgaggggcggagtcccgtaagaagtcccttctatgggag---tcatggtccttgaattttttctgattttct 25217647  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
     | || || ||||||||||||||||||||| ||| |||| || |||||| |||||||||| ||||||||    
T  25217648 agagaagtgtcggagcaatccgatcaagtagcccgaaaacccgattttttactaagaacaggtaacaat 25217716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 17474575 - 17474645
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcat 186  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||  ||||||||| ||||||    
T  17474575 tgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagtttcttctaagggagtcat 17474645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 27670873 - 27670803
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcat 186  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||| ||||||    
T  27670873 tgggtctaaacgatggaattttgaattttgaggggcggagtcccataagaggtctcttctaagggagtcat 27670803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 116 - 283
Target Start/End: Original strand, 41854680 - 41854846
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtccttaannnnnnnnn--atcttc 213  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||| |  ||||| ||   |||| |           || |||    
T  41854680 tgggtctaaacgatggaattttggattttgaggggcggagtcccataagaagttccttctaatggtgtcatgat---ccttgaatttttttctgattttc 41854776  T
Q  214 tggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||||| ||||| |||||||||||||||||| |||||||||||  ||||| ||||||||||  |||||||    
T  41854777 tggggaagtttcagagcaatccgatcaagtagcccaaaaatccggtttttaactaagaacagataacaat 41854846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 116 - 274
Target Start/End: Original strand, 33452219 - 33452376
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtccttaa--nnnnnnnnnatcttc 213  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||| || || ||   ||||||||||| |           || |||    
T  33452219 tgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaagtcgcttttatgggag---tcatggtccttgattttttttctgattttc 33452315  T
Q  214 tggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaaca 274  Q
    |||| | ||||||||||||||||||||||||  ||| ||| || |||||||||||||||||    
T  33452316 tgggaaagtttcggagcaatccgatcaagtagtccagaaacccgatttttgactaagaaca 33452376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 41203056 - 41203128
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||| |||||||||||||||||||||||  ||| |||||||||||||| |||||||||| ||||||||    
T  41203056 ttctggggaagtttcggagcaatccgatcaagttgcccgaaaatccaatttttaactaagaacaggtaacaat 41203128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 44465517 - 44465587
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcat 186  Q
    ||||||| || ||||||||||||||||||||||||||||||||| ||||||||| |||||| || ||||||    
T  44465517 tgggtctaaaagatggaattttggattttgaggggcggagtcccgtaagaagtcccttctaggggagtcat 44465587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 117 - 282
Target Start/End: Original strand, 38308610 - 38308773
Alignment:
Q  117 gggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctg 215  Q
    |||||| ||| ||||||||||||||||||||||||||||||| |||| || || ||||||||| ||   ||||| ||||| ||         || |||||    
T  38308610 gggtctaaacaatggaattttggattttgaggggcggagtccaataaaaattcccttctaagggag---tcatgatccttgaattttttctgattttctg 38308706  T
Q  216 gggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaa 282  Q
    |||| ||||| |||||||| ||||||||| ||| |||  || ||||||||||||||||| |||||||    
T  38308707 gggaagtttcagagcaatctgatcaagtagcccgaaatcccgatttttgactaagaacaggtaacaa 38308773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 34517385 - 34517313
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||| | ||||||||||||||||||||||||  || |||| |||||||||||||||||||| ||||||||    
T  34517385 ttctgggtaagtttcggagcaatccgatcaagtattccgaaaacccaatttttgactaagaacaggtaacaat 34517313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 38065354 - 38065414
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    ||||||| ||||||| |||||||||||||||||||||||||||| ||||||||| ||||||    
T  38065354 tgggtctaaacgatgaaattttggattttgaggggcggagtcccgtaagaagtctcttcta 38065414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 5507794 - 5507727
Alignment:
Q  119 gtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcat 186  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||  |||||| || ||||||    
T  5507794 gtctaaacgatggaattttggattttgaggggcggagttccataagaagtttcttctatgggagtcat 5507727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 32187661 - 32187715
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtca 170  Q
    ||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||    
T  32187661 tgggtctaaacgatggaattttggattttgaggggtggagtcccgtaagaagtca 32187715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 39447532 - 39447474
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    ||||| ||||||| |||||||||||||||||||||||||||| ||||||||| ||||||    
T  39447532 ggtctaaacgatgtaattttggattttgaggggcggagtcccgtaagaagtcccttcta 39447474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 15994896 - 15994949
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtc 169  Q
    ||||||| ||||||| |||||||||||||||||||||||||||| |||||||||    
T  15994896 tgggtctaaacgatgaaattttggattttgaggggcggagtcccgtaagaagtc 15994949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 15994986 - 15995055
Alignment:
Q  214 tggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||||| ||||||||||||||||||||| ||  |  |||||||||||||| |||||||||||||||||||    
T  15994986 tggggaagtttcggagcaatccgatcaaatagtctgaaaatccaattttttactaagaacatgtaacaat 15995055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 17133102 - 17133034
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    ||||||| ||||||| |||||||||||||||||| ||||||||| ||| ||||| ||||||||| ||||    
T  17133102 tgggtctaaacgatgaaattttggattttgagggtcggagtcccgtaaaaagtctcttctaagggagtc 17133034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 30763933 - 30763861
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| ||| |||||||||||||||||||||||  ||||||||||  |||||||||||||||||  |||||||    
T  30763933 ttctgaggaagtttcggagcaatccgatcaagttgcccaaaaatcagatttttgactaagaacagctaacaat 30763861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 30764027 - 30763967
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    |||||||  |||||| |||||||||||||||||||||||||||| ||||||||| ||||||    
T  30764027 tgggtctagacgatgaaattttggattttgaggggcggagtcccgtaagaagtcccttcta 30763967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 32187739 - 32187811
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||| ||||||||||||||||||||||||  || |||| || ||||||||| ||||||| ||||||||    
T  32187739 ttctggggaagtttcggagcaatccgatcaagtagtccgaaaacccgatttttgaccaagaacaggtaacaat 32187811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 16750221 - 16750263
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcc 158  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  16750221 tgggtctaaacgatggaattttggattttgaggggcggagtcc 16750263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 184
Target Start/End: Complemental strand, 25715835 - 25715770
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    ||||| || ||||||||||||||||||||||| |||||||||||||||| || ||||||||| ||||    
T  25715835 ggtctaaatgatggaattttggattttgaggg-cggagtcccataagaaatctcttctaagggagtc 25715770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 34517478 - 34517420
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    ||||| ||||||||||||||||||||||||| ||||| |||| ||||||||| ||||||    
T  34517478 ggtctaaacgatggaattttggattttgaggtgcggaatcccgtaagaagtcccttcta 34517420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 9847302 - 9847358
Alignment:
Q  127 gatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    ||||||||||||||||||||||| | ||||||| ||||||||| ||||||||||||||    
T  9847302 gatggaattttggattttgaggg-cagagtcccgtaagaagtctcttctaaggaagtc 9847358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 5507703 - 5507631
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||| |||||||||||||||||||||||  ||| |||| |  ||||||||||||||||| ||| ||||    
T  5507703 ttctggggaagtttcggagcaatccgatcaagttgcccgaaaacctgatttttgactaagaacaggtagcaat 5507631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 33834119 - 33834065
Alignment:
Q  127 gatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaa 181  Q
    ||||| |||||||| |||||| ||||||||||||| ||||||||||| |||||||    
T  33834119 gatggtattttggagtttgagaggcggagtcccattagaagtcacttataaggaa 33834065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 283
Target Start/End: Original strand, 38065457 - 38065519
Alignment:
Q  221 gtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||||||||||||||| || ||  |||||| ||||||| |||||||||| ||||||||    
T  38065457 gtttcggagcaatccgatcaaatagcctgaaaatctaattttttactaagaacaggtaacaat 38065519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 33440295 - 33440340
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtc 169  Q
    ||||||||||||||| |||||||| ||||||||||| |||||||||    
T  33440295 aacgatggaattttgaattttgagaggcggagtcccgtaagaagtc 33440340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 19109885 - 19109957
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||||| || ||||||||||||||||||||||||  |||||||    |||||||||||||||||  |||||||    
T  19109885 ttctggtgaagtttcggagcaatccgatcaagtagtccaaaaactggatttttgactaagaacagctaacaat 19109957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 35251309 - 35251257
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagt 168  Q
    ||||||| ||||||| ||||||||||||| |||||||||||  ||||||||||    
T  35251309 tgggtctaaacgatgaaattttggattttaaggggcggagtttcataagaagt 35251257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 41202966 - 41203026
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    ||||||| ||||||| ||||||||||||||| |||||||||||  |||| |||| ||||||    
T  41202966 tgggtctaaacgatgaaattttggattttgatgggcggagtcctgtaaggagtctcttcta 41203026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 9847084 - 9847150
Alignment:
Q  117 gggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    |||||| || ||||| |||||||||||||| | |||||||||| ||||||||| ||||||||| ||||    
T  9847084 gggtctaaatgatgggattttggattttga-gagcggagtcccgtaagaagtctcttctaagggagtc 9847150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 283
Target Start/End: Original strand, 16750300 - 16750371
Alignment:
Q  212 tctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||||||| |||||||  |||||||||||||||  || ||||||| |||||| ||||||||||  |||||||    
T  16750300 tctggggaagtttcggtacaatccgatcaagtagtccgaaaatccgattttttactaagaacagataacaat 16750371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 11457327 - 11457269
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    ||||| ||||||||||||||  |||||||||| ||||||| | ||||||||| ||||||    
T  11457327 ggtctaaacgatggaattttaaattttgagggacggagtctcgtaagaagtcccttcta 11457269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 92
Target Start/End: Complemental strand, 9693682 - 9693649
Alignment:
Q  59 ctaatgcaatttttttggatttttctgagaatat 92  Q
    ||||| ||||||||||||||||||||||||||||    
T  9693682 ctaattcaatttttttggatttttctgagaatat 9693649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 35251214 - 35251142
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||| | |||||||||||||| ||||||||| ||| |||| |  ||||| |||||||||||  |||||||    
T  35251214 ttctgggaaagtttcggagcaatctgatcaagtagcccgaaaaccggattttcgactaagaacaactaacaat 35251142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 168
Target Start/End: Original strand, 42604803 - 42604855
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagt 168  Q
    ||||||| ||||||| ||||||||||||| ||||||| |||||| ||| ||||    
T  42604803 tgggtctaaacgatgaaattttggattttaaggggcgaagtcccgtaaaaagt 42604855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 45293998 - 45293946
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    ||||||| ||||||||||||||||||| | ||||| | |||||||| ||||||    
T  45293998 aacgatgaaattttggattttgaggggtgaagtccaacaagaagtcccttcta 45293946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 116 - 283
Target Start/End: Original strand, 41584447 - 41584612
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| ||| |||||||||| |||| |||||||||||||||| ||||||||| |||||| || ||||||   ||||||| ||         || ||||    
T  41584447 tgggtctaaacaatggaattttagattgtgaggggcggagtcccgtaagaagtcccttctatgggagtcat---ggtccttgaattttttctgattttct 41584543  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||| | |||||||||||||||||||||||| ||| |||| || ||||||||||||||||||||||||||    
T  41584544 gggcaagtttcggagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacatgtaacaat 41584612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 116 - 283
Target Start/End: Original strand, 18583326 - 18583491
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| ||| |||||||||||||||||||||||||||||||| ||||||||| |||||| || ||   || |||||||| ||         || || |    
T  18583326 tgggtctaaacaatggaattttggattttgaggggcggagtcccgtaagaagtctcttctatgggag---tcgtggtccttgaatttgttctgatttttt 18583422  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| ||||| |||||||||||||||||| ||| |||| || ||||||||||||||||| ||||||||    
T  18583423 ggggaagtttcagagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaggtaacaat 18583491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 283
Target Start/End: Original strand, 45046640 - 45046797
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctggggaggt 222  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||   ||||||||||| ||         || || |||| | ||    
T  45046640 aacgatggaattttggattttgaggggcggagtctcataagaagtcccttctaagggag---tcatggtccttgaattttttctgattttttgggcaagt 45046736  T
Q  223 ttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||||||||||||||||||||| ||| |||| ||  ||||| |||||||||| ||||||||    
T  45046737 ttcggagcaatccgatcaagtagcccgaaaacccggtttttaactaagaacaggtaacaat 45046797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 283
Target Start/End: Original strand, 6223543 - 6223698
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtccttaannnnnnnnnatcttctggggaggtt 223  Q
    |||||||||||||||||||||||||||||| ||||  ||||||||| ||||||||| |||||| ||   |||| |         || ||||||| | |||    
T  6223543 aacgatggaattttggattttgaggggcggtgtccg-taagaagtctcttctaagggagtcatgat---ccttgaatttttctgattttctgggaaagtt 6223638  T
Q  224 tcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    || |||||||||||||||||| ||| |||| || ||||||||||||||||||||||||||    
T  6223639 tcagagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacatgtaacaat 6223698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 124 - 283
Target Start/End: Complemental strand, 34006630 - 34006473
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctggggaggt 222  Q
    ||||||| |||||||||||||||||| ||||||||| ||||||||| |||||| || |||||| ||   |||| ||         || ||||||||| ||    
T  34006630 aacgatgaaattttggattttgagggacggagtcccgtaagaagtcccttctacgggagtcatgat---ccttgaattttttctgattttctggggaagt 34006534  T
Q  223 ttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||||||||||||||||||||| ||| |||| | |||||||||||||||||| ||| ||||    
T  34006533 ttcggagcaatccgatcaagtagcccgaaaacctaatttttgactaagaacaggtagcaat 34006473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 116 - 283
Target Start/End: Original strand, 40907716 - 40907881
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| || |  ||   ||||| ||||| ||         || ||||    
T  40907716 tgggtctaaacgatggaattttggattttgaggggcggagtcccataagaagtcccttttatgagag---tcatgatccttgaattttttctgattttct 40907812  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| ||||||||||||||||||||||||  || |||| || |||||| ||||| |||| ||||||||    
T  40907813 ggggaagtttcggagcaatccgatcaagtagtccgaaaacccgattttttactaacaacaggtaacaat 40907881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 116 - 283
Target Start/End: Complemental strand, 42546344 - 42546179
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| ||||||||||||||||||||||| |||||||||||| ||||||||  ||||||||| ||   ||||||||||| ||         || ||||    
T  42546344 tgggtctaaacgatggaattttggattttga-gggcggagtcccgtaagaagttccttctaagggag---tcatggtccttaaattttttctgattttct 42546249  T
Q  215 ggggaggtttcggagcaatccgatcaagtaaccc-aaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| |||||||||||||||||||||||| ||| ||||| ||  ||||| ||||||||||  |||||||    
T  42546248 ggggaagtttcggagcaatccgatcaagtagcccgaaaaacccggtttttaactaagaacagataacaat 42546179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 52744718 - 52744790
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||| ||||||||||||||||||||||||  || |||| |||||||||||||||||||| ||||||||    
T  52744718 ttctggggaagtttcggagcaatccgatcaagtagtccgaaaacccaatttttgactaagaacaagtaacaat 52744790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 283
Target Start/End: Original strand, 28866412 - 28866577
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| ||||||| |||||||||||||||||||||||||||| || |||||  ||||||||| ||   ||| ||||||| ||         || || |    
T  28866412 tgggtctaaacgatgaaattttggattttgaggggcggagtcccgtaggaagtgccttctaagggag---tcacggtccttgaattttttctaatttttt 28866508  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| ||||||||||||||||||||||||  || |||  || ||||||||||||||||| ||||||||    
T  28866509 ggggaagtttcggagcaatccgatcaagtagtccgaaataccgatttttgactaagaacaggtaacaat 28866577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 283
Target Start/End: Complemental strand, 38885590 - 38885425
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||| | |  ||   | ||||| ||| ||         || || |    
T  38885590 tgggtctaaacgatggaattttgaattttgaggggcggagtcccataagaagtcccttccaggagag---ttatggtgcttgaatttttttttatttttt 38885494  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||| | |||||||||||||||||||||||| ||| |||| ||||||||| |||||||||| ||||||||    
T  38885493 gggaaagtttcggagcaatccgatcaagtagcccgaaaacccaatttttaactaagaacaagtaacaat 38885425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 117 - 283
Target Start/End: Complemental strand, 27795206 - 27795042
Alignment:
Q  117 gggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttctg 215  Q
    |||||| ||||||| |||||||||||||||||||||||||||  ||||||||| ||||||    |||||| ||   |||| ||         || |||||    
T  27795206 gggtctaaacgatgaaattttggattttgaggggcggagtcctgtaagaagtctcttctacaagagtcatgat---ccttgaattttttctgattttctg 27795110  T
Q  216 gggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
     ||| |||||||||||||||||||||||| |||||||| || || |||||||||||||| ||||||||    
T  27795109 tggaagtttcggagcaatccgatcaagtagcccaaaaacccgatgtttgactaagaacaggtaacaat 27795042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 116 - 186
Target Start/End: Complemental strand, 49786645 - 49786575
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcat 186  Q
    ||||| ||||| |||||||||||||||||||||||||||||| ||||||||||| |||||| || ||||||    
T  49786645 tgggtttgaacaatggaattttggattttgaggggcggagtctcataagaagtctcttctacgggagtcat 49786575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 17000663 - 17000591
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||| ||||||||||||||| |||||||| ||| ||||| | ||||||||||||||||| ||||||||    
T  17000663 ttctggggaagtttcggagcaatccaatcaagtagcccgaaaattcgatttttgactaagaacaggtaacaat 17000591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 34162596 - 34162668
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||| |||||||||||| || |||||||| ||| ||||| | ||||||||||||||||||||||||||    
T  34162596 ttctggggaagtttcggagcaaaccaatcaagtagcccgaaaattcgatttttgactaagaacatgtaacaat 34162668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 116 - 283
Target Start/End: Original strand, 33611192 - 33611357
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| ||| |||||||||||||||||||||| || |||||| ||||||||| ||| || ||||||||    ||||||  ||         || || |    
T  33611192 tgggtctaaacaatggaattttggattttgagggacgtagtcccgtaagaagtcccttttatggaagtcac---ggtcctcgaattttttctgatttttt 33611288  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| ||||| |||||||||||||||||| ||| |||| || ||||||||||||||||| ||||||||    
T  33611289 ggggaagtttcagagcaatccgatcaagtagcccgaaaacccgatttttgactaagaacaggtaacaat 33611357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 283
Target Start/End: Original strand, 24472610 - 24472774
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtccttaannnnnnnnnatcttctg 215  Q
    ||||||| ||||||| ||||||||||||||| ||||||||||||  |||||||| |||||| || ||   || || ||||| |         || |||||    
T  24472610 tgggtctaaacgatgaaattttggattttgaagggcggagtcccgcaagaagtcccttctatgggag---tcttgatccttgattttttctgattttctg 24472706  T
Q  216 gggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||| ||||||||||||||| |||||||  |||| |||| | |||||||||||||||||  |||||||    
T  24472707 gggaagtttcggagcaatccaatcaagttgcccacaaattcgatttttgactaagaacagctaacaat 24472774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 41584363 - 41584428
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaa 181  Q
    ||||||| ||| |||||||||| ||||||||||||||||||||| ||||||||| |||||| ||||    
T  41584363 tgggtctaaacaatggaattttagattttgaggggcggagtcccgtaagaagtcccttctatggaa 41584428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 43319078 - 43319134
Alignment:
Q  127 gatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    ||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  43319078 gatggaattttggattttgaggg-cggagtcccgtaagaagtctcttctaaggaagtc 43319134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 7011494 - 7011422
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||| |||||||||||||||||||||||| ||| |||| || |||||||||||| |||| || |||||    
T  7011494 ttctggggatgtttcggagcaatccgatcaagtagcccgaaaacccgatttttgactaaaaacaggttacaat 7011422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 26723363 - 26723435
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||| ||||||||||||||||||||||||  ||||||| || |||||| ||||||||||  |||||||    
T  26723363 ttctggggaagtttcggagcaatccgatcaagtagtccaaaaacccgattttttactaagaacagataacaat 26723435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 49677767 - 49677695
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||| ||||||||||||||||||||||||  |  |||| || |||||| |||||||||||||||||||    
T  49677767 ttctggggaagtttcggagcaatccgatcaagtaggctgaaaacccgatttttaactaagaacatgtaacaat 49677695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 40650486 - 40650529
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtccc 159  Q
    ||||||| ||||||||||||||||||||||||||||||||||||    
T  40650486 tgggtctaaacgatggaattttggattttgaggggcggagtccc 40650529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 118 - 184
Target Start/End: Original strand, 800677 - 800742
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    ||||| ||||||||||||||||||||||| |||| ||||||| ||||||||| ||||||||| ||||    
T  800677 ggtctaaacgatggaattttggattttga-gggcagagtcccgtaagaagtcccttctaagggagtc 800742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 283
Target Start/End: Original strand, 3561220 - 3561282
Alignment:
Q  221 gtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||||||||||||| |||||||||||||||| |||  |||||||||||||||||  |||||||    
T  3561220 gtttcggagcaatctgatcaagtaacccaaagatcggatttttgactaagaacaactaacaat 3561282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 49677837 - 49677787
Alignment:
Q  119 gtctgaacgatggaattttggattttgaggggcggagtcccataagaagtc 169  Q
    |||| ||||||||||||||| |||||||||||||||||||| |||||||||    
T  49677837 gtctaaacgatggaattttgaattttgaggggcggagtcccgtaagaagtc 49677787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 283
Target Start/End: Complemental strand, 23443019 - 23442950
Alignment:
Q  214 tggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||||| ||||| ||||||||||||||||||  || |||| || ||||||||||||||||| ||||||||    
T  23443019 tggggaagtttcagagcaatccgatcaagtagtccgaaaacccgatttttgactaagaacaggtaacaat 23442950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 283
Target Start/End: Original strand, 45567768 - 45567837
Alignment:
Q  214 tggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||||| ||||||||||||||||||||||||  || |||| || |||||| |||||||||| ||||||||    
T  45567768 tggggaagtttcggagcaatccgatcaagtagtccgaaaacccgattttttactaagaacaggtaacaat 45567837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 9445972 - 9446038
Alignment:
Q  117 gggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    |||||| ||||||| ||||||||||||||| |||||||||||| |||||| || ||||||||| ||||    
T  9445972 gggtctaaacgatgaaattttggattttga-gggcggagtcccgtaagaaatcccttctaagggagtc 9446038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 44572885 - 44572952
Alignment:
Q  119 gtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcat 186  Q
    |||| |||||| |||||||| ||||||| |||||||||||| ||||||||| |||||| || ||||||    
T  44572885 gtctaaacgatagaattttgaattttgatgggcggagtcccctaagaagtctcttctatgggagtcat 44572952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 168
Target Start/End: Original strand, 6099725 - 6099775
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagt 168  Q
    ||||| ||||||  |||||||||||||||||||| ||||||||||||||||    
T  6099725 ggtctaaacgattaaattttggattttgaggggcagagtcccataagaagt 6099775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 168
Target Start/End: Original strand, 6099905 - 6099955
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagt 168  Q
    ||||| ||||||  |||||||||||||||||||| ||||||||||||||||    
T  6099905 ggtctaaacgattaaattttggattttgaggggcagagtcccataagaagt 6099955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 8704308 - 8704360
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    ||||||| ||||||||||||||||||| | |||||| ||||||||| ||||||    
T  8704308 aacgatgaaattttggattttgaggggtgtagtcccgtaagaagtcccttcta 8704360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 283
Target Start/End: Original strand, 15069732 - 15069788
Alignment:
Q  227 gagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||||||||||||||||| | | ||||||| |||||| |||||||||| ||||||||    
T  15069732 gagcaatccgatcaagtagctcgaaaatccgatttttaactaagaacaagtaacaat 15069788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 176
Target Start/End: Complemental strand, 26230409 - 26230357
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    ||||||| |||||| ||||||||||| | ||||||||||||||||| ||||||    
T  26230409 aacgatgaaattttagattttgagggacagagtcccataagaagtcccttcta 26230357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 40650550 - 40650622
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||| ||| |||||||||||||||||||||||| ||| ||||  |  ||||| |||||||||| ||||||||    
T  40650550 ttctgaggaagtttcggagcaatccgatcaagtagcccgaaaactcggtttttaactaagaacaggtaacaat 40650622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 3561119 - 3561177
Alignment:
Q  118 ggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    ||||| || |||| ||||||| ||||||||||||||||  ||| |||||||||||||||    
T  3561119 ggtctaaaagatgaaattttgaattttgaggggcggagctccacaagaagtcacttcta 3561177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 7011588 - 7011538
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagt 168  Q
    ||||||| |||  ||||||||||||||  ||||||||||||||||||||||||    
T  7011588 tgggtctaaacattggaattttggatt--gaggggcggagtcccataagaagt 7011538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 168
Target Start/End: Complemental strand, 38131259 - 38131210
Alignment:
Q  119 gtctgaacgatggaattttggattttgaggggcggagtcccataagaagt 168  Q
    |||| ||||||||| |||||||||||||||||| |||||||  |||||||    
T  38131259 gtctaaacgatggagttttggattttgaggggcagagtcccgaaagaagt 38131210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 25563289 - 25563361
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    |||| |||| |||||||||||||||||||||||| | | || |||  |||||||||||| ||||  |||||||    
T  25563289 ttcttgggaagtttcggagcaatccgatcaagtagctcgaatatcggatttttgactaataacaactaacaat 25563361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 43318867 - 43318918
Alignment:
Q  127 gatggaattttggattttgaggggcggagtcccataagaagtcacttctaagg 179  Q
    |||| ||||||||||||||| |||| ||||||| ||||||||| |||||||||    
T  43318867 gatgaaattttggattttga-gggcagagtcccgtaagaagtctcttctaagg 43318918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 168
Target Start/End: Complemental strand, 51307642 - 51307598
Alignment:
Q  124 aacgatggaattttggattttgaggggcggagtcccataagaagt 168  Q
    |||||||||||||| |||||||||||| | |||| ||||||||||    
T  51307642 aacgatggaattttagattttgaggggtgaagtctcataagaagt 51307598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 116 - 283
Target Start/End: Original strand, 9280 - 9444
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtcatcatggtcctt-aannnnnnnnnatcttct 214  Q
    ||||||| |||||||| |||||| |||||||||||||||||||| ||||||||| ||||||||| |||||    ||||||| ||         || ||||    
T  9280 tgggtctaaacgatggtattttgaattttgaggggcggagtcccgtaagaagtc-cttctaagggagtcaa---ggtccttgaattttctctgattttct 9375  T
Q  215 ggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
     || | ||||| ||||||||||||||||||| || ||||||| |||||| |||||||||||||||||||    
T  9376 aggcaagtttcagagcaatccgatcaagtaatccgaaaatccgatttttaactaagaacatgtaacaat 9444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 3175 - 3238
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaagg 179  Q
    ||||||| ||||||||||||||||||||||||||| || ||||||||||||||| |||||||||    
T  3175 tgggtctaaacgatggaattttggattttgaggggtggggtcccataagaagtcccttctaagg 3238  T

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Target: scaffold0182 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 23350 - 23299
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaag 167  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  23350 tgggtctaaacgatggaattttggattttgaggggcggagtcccgtaagaag 23299  T

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Target: scaffold0027 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 141776 - 141826
Alignment:
Q  116 tgggtctgaacgatggaattttggattttgaggggcggagtcccataagaa 166  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  141776 tgggtctaaacgatggaattttggattttgaggggcagagtcccataagaa 141826  T

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Target: scaffold0027; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 283
Target Start/End: Original strand, 141839 - 141911
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||| ||||||||||||||||||||||||  |  |||| || ||||||||||||||||||| ||||||    
T  141839 ttctggggaagtttcggagcaatccgatcaagtagtctgaaaacccgatttttgactaagaacatgcaacaat 141911  T

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Target: scaffold0010 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 283
Target Start/End: Complemental strand, 140769 - 140697
Alignment:
Q  211 ttctggggaggtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaacatgtaacaat 283  Q
    ||||||||| ||||||||||||||||||||||||  |  |||| || ||||||||||||||||| ||||||||    
T  140769 ttctggggaagtttcggagcaatccgatcaagtagtctgaaaacccgatttttgactaagaacaagtaacaat 140697  T

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Target: scaffold0010; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 173
Target Start/End: Complemental strand, 140860 - 140806
Alignment:
Q  119 gtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcactt 173  Q
    |||| ||||||| || |||||||||||||||||| |||||| ||||||||| |||    
T  140860 gtctaaacgatgaaactttggattttgaggggcgaagtcccgtaagaagtccctt 140806  T

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Target: scaffold0564 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 4745 - 4680
Alignment:
Q  119 gtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    |||| ||||||| ||||||||||||||||||| |||||||| ||||||||| ||| | ||||||||    
T  4745 gtctaaacgatgtaattttggattttgaggggtggagtcccgtaagaagtcccttttgaggaagtc 4680  T

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Target: scaffold0018 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 176
Target Start/End: Original strand, 174146 - 174203
Alignment:
Q  119 gtctgaacgatggaattttggattttgaggggcggagtcccataagaagtcacttcta 176  Q
    |||| ||||||||||||||| |||||||||||||||||| | ||||||||| ||||||    
T  174146 gtctaaacgatggaattttgaattttgaggggcggagtctcgtaagaagtcccttcta 174203  T

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Target: scaffold0006 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 221 - 273
Target Start/End: Original strand, 59855 - 59907
Alignment:
Q  221 gtttcggagcaatccgatcaagtaacccaaaaatccaatttttgactaagaac 273  Q
    ||||||||| |||| ||||||||||||| |||||| |||||||||||||||||    
T  59855 gtttcggagaaatctgatcaagtaacccgaaaatcaaatttttgactaagaac 59907  T

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Target: scaffold0016 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 205893 - 205944
Alignment:
Q  117 gggtctgaacgatggaattttggattttgaggggcggagtcccataagaagtc 169  Q
    |||||| || |||||||||||||||||||| |||||||||||| |||||||||    
T  205893 gggtctaaatgatggaattttggattttga-gggcggagtcccgtaagaagtc 205944  T

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Target: scaffold0016; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 205692 - 205748
Alignment:
Q  127 gatggaattttggattttgaggggcggagtcccataagaagtcacttctaaggaagtc 184  Q
    |||| ||||||||||||||| ||| |||||||| ||||||||| ||||||||| ||||    
T  205692 gatgaaattttggattttga-gggtggagtcccgtaagaagtctcttctaagggagtc 205748  T

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Target: scaffold0770 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0770
Description:

Target: scaffold0770; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 156
Target Start/End: Complemental strand, 4150 - 4122
Alignment:
Q  128 atggaattttggattttgaggggcggagt 156  Q
    |||||||||||||||||||||||||||||    
T  4150 atggaattttggattttgaggggcggagt 4122  T

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Target: scaffold0029 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 156
Target Start/End: Complemental strand, 102454 - 102426
Alignment:
Q  128 atggaattttggattttgaggggcggagt 156  Q
    |||||||||||||||||||||||||||||    
T  102454 atggaattttggattttgaggggcggagt 102426  T

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