View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3484_low_13 (Length: 244)

Name: NF3484_low_13
Description: NF3484
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3484_low_13
NF3484_low_13
[»] chr1 (39 HSPs)
chr1 (1-133)||(37029528-37029660)
chr1 (134-237)||(2581912-2582015)
chr1 (132-239)||(38595149-38595256)
chr1 (132-239)||(8346386-8346493)
chr1 (137-239)||(9474874-9474976)
chr1 (136-237)||(51898683-51898784)
chr1 (137-239)||(3000319-3000421)
chr1 (136-239)||(41758804-41758907)
chr1 (140-239)||(44548374-44548473)
chr1 (137-239)||(27564733-27564835)
chr1 (137-239)||(47452318-47452420)
chr1 (137-235)||(48716284-48716382)
chr1 (135-235)||(38632323-38632423)
chr1 (136-239)||(50630457-50630560)
chr1 (134-239)||(32813244-32813349)
chr1 (137-236)||(37649198-37649297)
chr1 (137-239)||(43132-43234)
chr1 (138-237)||(11152378-11152476)
chr1 (134-235)||(23597093-23597194)
chr1 (167-239)||(13414791-13414863)
chr1 (132-239)||(5958998-5959105)
chr1 (137-239)||(50590998-50591100)
chr1 (135-235)||(26274430-26274530)
chr1 (144-239)||(26440741-26440836)
chr1 (136-239)||(37926436-37926539)
chr1 (135-239)||(49811525-49811629)
chr1 (142-235)||(44453984-44454077)
chr1 (159-239)||(45044558-45044638)
chr1 (137-239)||(41608491-41608593)
chr1 (137-237)||(6260870-6260970)
chr1 (137-239)||(47748443-47748544)
chr1 (164-237)||(48489328-48489400)
chr1 (137-237)||(3302533-3302633)
chr1 (168-232)||(44334175-44334239)
chr1 (164-226)||(750240-750301)
chr1 (164-226)||(5489880-5489941)
chr1 (164-226)||(43571021-43571082)
chr1 (164-226)||(48498897-48498958)
chr1 (178-239)||(44332369-44332430)
[»] chr4 (35 HSPs)
chr4 (137-239)||(11511460-11511562)
chr4 (132-239)||(50052426-50052533)
chr4 (135-239)||(48183047-48183151)
chr4 (132-239)||(480445-480552)
chr4 (135-239)||(24995105-24995209)
chr4 (136-239)||(29234243-29234346)
chr4 (132-239)||(42044365-42044472)
chr4 (137-239)||(3481654-3481756)
chr4 (137-239)||(6034044-6034146)
chr4 (137-239)||(41236347-41236449)
chr4 (134-239)||(29239883-29239988)
chr4 (137-235)||(54473535-54473633)
chr4 (135-239)||(23608233-23608337)
chr4 (137-237)||(50526171-50526271)
chr4 (137-239)||(31910192-31910294)
chr4 (135-239)||(29977883-29977987)
chr4 (133-239)||(19670714-19670820)
chr4 (175-239)||(41823920-41823984)
chr4 (137-239)||(40574779-40574881)
chr4 (142-239)||(53352564-53352660)
chr4 (135-239)||(55475189-55475293)
chr4 (136-239)||(47986207-47986310)
chr4 (136-239)||(50813890-50813993)
chr4 (159-239)||(17983741-17983821)
chr4 (135-239)||(32766956-32767060)
chr4 (167-239)||(48647724-48647796)
chr4 (137-239)||(8343161-8343263)
chr4 (136-239)||(44536744-44536846)
chr4 (136-238)||(28480267-28480369)
chr4 (136-238)||(28481142-28481244)
chr4 (136-238)||(28482017-28482119)
chr4 (135-235)||(29547961-29548061)
chr4 (135-239)||(47104542-47104646)
chr4 (137-239)||(55079711-55079814)
chr4 (145-239)||(29589738-29589831)
[»] chr7 (40 HSPs)
chr7 (135-239)||(8080381-8080485)
chr7 (135-239)||(7389387-7389491)
chr7 (136-239)||(36361911-36362014)
chr7 (137-239)||(4999512-4999614)
chr7 (137-239)||(38267040-38267142)
chr7 (133-239)||(38837213-38837319)
chr7 (136-239)||(3434561-3434664)
chr7 (132-239)||(35137528-35137635)
chr7 (136-239)||(36362025-36362128)
chr7 (137-239)||(19329842-19329944)
chr7 (140-239)||(3783998-3784097)
chr7 (134-239)||(40957704-40957809)
chr7 (135-239)||(19436185-19436289)
chr7 (138-239)||(32951491-32951592)
chr7 (132-239)||(8238207-8238315)
chr7 (140-239)||(3694370-3694469)
chr7 (135-239)||(38044195-38044299)
chr7 (132-239)||(35468853-35468960)
chr7 (134-239)||(11044185-11044280)
chr7 (137-239)||(21234401-21234503)
chr7 (137-231)||(46374808-46374902)
chr7 (135-239)||(36208171-36208275)
chr7 (136-239)||(22343360-22343463)
chr7 (136-239)||(41915740-41915843)
chr7 (136-239)||(46033799-46033902)
chr7 (131-237)||(7727900-7728006)
chr7 (133-239)||(18207176-18207281)
chr7 (142-239)||(35522881-35522978)
chr7 (136-239)||(26296643-26296746)
chr7 (137-239)||(39255922-39256023)
chr7 (137-239)||(40846111-40846213)
chr7 (134-203)||(10343597-10343666)
chr7 (137-239)||(32564424-32564526)
chr7 (137-239)||(41423682-41423784)
chr7 (167-239)||(16374822-16374894)
chr7 (171-239)||(27744307-27744375)
chr7 (137-239)||(31735884-31735979)
chr7 (164-239)||(2318241-2318316)
chr7 (164-226)||(26898337-26898398)
chr7 (164-205)||(44326303-44326343)
[»] chr5 (30 HSPs)
chr5 (132-239)||(18520882-18520989)
chr5 (131-237)||(14831808-14831914)
chr5 (135-239)||(36732940-36733044)
chr5 (136-239)||(2740273-2740376)
chr5 (133-239)||(13811648-13811754)
chr5 (137-239)||(40145407-40145509)
chr5 (137-239)||(33149636-33149738)
chr5 (137-235)||(42414304-42414402)
chr5 (137-239)||(35785199-35785301)
chr5 (137-239)||(28177775-28177877)
chr5 (136-239)||(6679697-6679800)
chr5 (137-239)||(35943890-35943992)
chr5 (135-239)||(15409608-15409712)
chr5 (136-228)||(41470425-41470517)
chr5 (137-239)||(26720516-26720618)
chr5 (137-239)||(26990265-26990367)
chr5 (134-239)||(3921263-3921368)
chr5 (137-237)||(20073516-20073616)
chr5 (133-237)||(31008984-31009088)
chr5 (132-239)||(36875610-36875708)
chr5 (136-239)||(2252166-2252269)
chr5 (137-239)||(33825322-33825424)
chr5 (138-235)||(16327902-16327999)
chr5 (135-239)||(39688895-39688999)
chr5 (137-239)||(6259999-6260101)
chr5 (185-235)||(31132392-31132442)
chr5 (181-239)||(21370048-21370106)
chr5 (135-239)||(9603811-9603915)
chr5 (134-238)||(38296200-38296304)
chr5 (142-200)||(10356639-10356698)
[»] chr2 (34 HSPs)
chr2 (136-239)||(7465733-7465836)
chr2 (137-239)||(17473020-17473122)
chr2 (133-239)||(33436098-33436204)
chr2 (135-239)||(9058478-9058582)
chr2 (135-239)||(30915461-30915565)
chr2 (136-239)||(5574486-5574589)
chr2 (140-239)||(28863458-28863557)
chr2 (135-239)||(10249380-10249484)
chr2 (137-239)||(13438343-13438445)
chr2 (136-237)||(32505648-32505749)
chr2 (137-239)||(40701478-40701580)
chr2 (140-239)||(19930818-19930917)
chr2 (133-239)||(20700811-20700917)
chr2 (137-239)||(27864704-27864806)
chr2 (137-239)||(28381653-28381755)
chr2 (133-239)||(42257189-42257295)
chr2 (133-239)||(38273140-38273246)
chr2 (137-239)||(40613900-40614002)
chr2 (134-239)||(38882809-38882916)
chr2 (137-237)||(4060685-4060785)
chr2 (136-239)||(33436210-33436313)
chr2 (134-239)||(26891502-26891607)
chr2 (137-239)||(17820002-17820104)
chr2 (136-235)||(2533123-2533221)
chr2 (136-239)||(36168835-36168938)
chr2 (138-239)||(41575138-41575240)
chr2 (132-239)||(45097733-45097840)
chr2 (132-239)||(13365346-13365455)
chr2 (137-239)||(38732354-38732456)
chr2 (137-235)||(43490121-43490219)
chr2 (159-239)||(2997485-2997565)
chr2 (143-239)||(3439985-3440081)
chr2 (180-237)||(3737986-3738043)
chr2 (135-206)||(17823782-17823853)
[»] chr3 (38 HSPs)
chr3 (137-239)||(53982011-53982113)
chr3 (135-239)||(27714889-27714993)
chr3 (137-239)||(33644200-33644302)
chr3 (133-239)||(49607410-49607516)
chr3 (136-239)||(17470404-17470507)
chr3 (142-239)||(52629305-52629402)
chr3 (135-239)||(54868893-54868997)
chr3 (132-239)||(31456684-31456791)
chr3 (137-239)||(8076393-8076495)
chr3 (141-239)||(48587089-48587187)
chr3 (135-239)||(11095353-11095455)
chr3 (136-239)||(9562998-9563101)
chr3 (137-239)||(26141530-26141632)
chr3 (135-239)||(33118849-33118953)
chr3 (136-239)||(24699952-24700055)
chr3 (137-239)||(14623837-14623939)
chr3 (135-239)||(41189762-41189866)
chr3 (137-239)||(51419358-51419460)
chr3 (138-239)||(13898053-13898154)
chr3 (142-239)||(26754700-26754797)
chr3 (134-222)||(36707439-36707527)
chr3 (136-239)||(35536625-35536728)
chr3 (133-239)||(11347920-11348026)
chr3 (136-239)||(8956761-8956864)
chr3 (137-239)||(20764913-20765015)
chr3 (141-239)||(30801731-30801829)
chr3 (137-239)||(47531865-47531967)
chr3 (137-239)||(45058551-45058652)
chr3 (135-239)||(11907369-11907473)
chr3 (159-239)||(36331327-36331407)
chr3 (135-205)||(35965806-35965876)
chr3 (137-239)||(41080709-41080809)
chr3 (142-239)||(42823116-42823213)
chr3 (135-239)||(35093583-35093687)
chr3 (136-199)||(36331416-36331479)
chr3 (136-239)||(48375704-48375807)
chr3 (140-239)||(25407145-25407245)
chr3 (164-216)||(43745773-43745825)
[»] chr8 (34 HSPs)
chr8 (137-239)||(12831047-12831149)
chr8 (137-239)||(15197333-15197435)
chr8 (136-237)||(37038478-37038579)
chr8 (135-239)||(14547920-14548024)
chr8 (132-239)||(504119-504226)
chr8 (137-239)||(23122595-23122697)
chr8 (137-239)||(34012294-34012396)
chr8 (137-239)||(40423941-40424043)
chr8 (132-239)||(5957825-5957932)
chr8 (137-239)||(1179938-1180040)
chr8 (134-239)||(10284629-10284734)
chr8 (136-239)||(44507085-44507188)
chr8 (132-239)||(43414579-43414686)
chr8 (137-239)||(15048180-15048281)
chr8 (159-239)||(8841430-8841510)
chr8 (142-239)||(10621085-10621182)
chr8 (135-239)||(4854861-4854965)
chr8 (132-239)||(16383372-16383479)
chr8 (135-239)||(15258927-15259031)
chr8 (135-239)||(34307214-34307318)
chr8 (132-239)||(30479472-30479579)
chr8 (137-239)||(20074940-20075034)
chr8 (135-239)||(24307791-24307895)
chr8 (181-239)||(9122229-9122287)
chr8 (135-239)||(42221513-42221617)
chr8 (132-239)||(16056399-16056506)
chr8 (132-200)||(24307624-24307692)
chr8 (137-220)||(14055609-14055692)
chr8 (136-239)||(17443824-17443927)
chr8 (136-239)||(32032724-32032826)
chr8 (138-176)||(9122196-9122234)
chr8 (164-226)||(29705466-29705527)
chr8 (164-205)||(20148885-20148925)
chr8 (179-239)||(38229470-38229530)
[»] chr6 (23 HSPs)
chr6 (137-239)||(32869678-32869780)
chr6 (140-239)||(22880656-22880755)
chr6 (132-239)||(17598549-17598656)
chr6 (137-239)||(29857827-29857929)
chr6 (136-239)||(11427615-11427720)
chr6 (134-239)||(6209463-6209568)
chr6 (133-239)||(23128125-23128231)
chr6 (137-239)||(31109398-31109500)
chr6 (136-239)||(31976247-31976350)
chr6 (133-239)||(31110759-31110863)
chr6 (133-239)||(15832573-15832679)
chr6 (134-239)||(30341358-30341463)
chr6 (135-239)||(15990040-15990144)
chr6 (137-239)||(15508022-15508124)
chr6 (137-239)||(31953028-31953130)
chr6 (141-239)||(28536486-28536582)
chr6 (137-239)||(4231548-4231650)
chr6 (132-239)||(946371-946478)
chr6 (132-239)||(12732477-12732584)
chr6 (181-239)||(30870058-30870116)
chr6 (142-239)||(9379710-9379807)
chr6 (164-205)||(3213525-3213565)
chr6 (164-205)||(21293612-21293652)
[»] scaffold0321 (1 HSPs)
scaffold0321 (132-239)||(10107-10214)
[»] scaffold0237 (1 HSPs)
scaffold0237 (137-239)||(4029-4131)
[»] scaffold1268 (1 HSPs)
scaffold1268 (137-239)||(927-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (137-239)||(927-1029)
[»] scaffold0018 (1 HSPs)
scaffold0018 (164-239)||(152525-152600)
[»] scaffold0316 (1 HSPs)
scaffold0316 (166-239)||(17083-17156)
[»] scaffold0110 (1 HSPs)
scaffold0110 (137-239)||(8861-8963)


Alignment Details
Target: chr1 (Bit Score: 129; Significance: 7e-67; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 37029660 - 37029528
Alignment:
Q  1 ttagtaatatgaatggtgccattgagaaaacgagagaagattttggaaagcagagctaatggcaatagagcaacctacaatgaaaggccaggaatttggt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37029660 ttagtaatatgaatggtgccattgagaaaacgagagaagattttggaaagcagagctactggcaatagagcaacctacaatgaaaggccaggaatttggt 37029561  T
Q  101 gtaatgcatcaagtaacgtgttagggaatccaa 133  Q
    |||||||||||||||||||||||||||||||||    
T  37029560 gtaatgcatcaagtaacgtgttagggaatccaa 37029528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 2581912 - 2582015
Alignment:
Q  134 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacact 233  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2581912 aaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacact 2582011  T
Q  234 ttct 237  Q
    ||||    
T  2582012 ttct 2582015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 38595149 - 38595256
Alignment:
Q  132 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 231  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  38595149 aaaaagagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 38595248  T
Q  232 ctttctct 239  Q
    ||||||||    
T  38595249 ctttctct 38595256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 8346493 - 8346386
Alignment:
Q  132 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 231  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  8346493 aaaaagagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcaca 8346394  T
Q  232 ctttctct 239  Q
    ||||||||    
T  8346393 ctttctct 8346386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 9474976 - 9474874
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactttc 9474877  T
Q  237 tct 239  Q
    |||    
T  9474876 tct 9474874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 136 - 237
Target Start/End: Complemental strand, 51898784 - 51898683
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  51898784 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 51898685  T
Q  236 ct 237  Q
    ||    
T  51898684 ct 51898683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 3000319 - 3000421
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||| ||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttc 3000418  T
Q  237 tct 239  Q
    |||    
T  3000419 tct 3000421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 41758804 - 41758907
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||| ||||||||    
T  41758804 agagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacacttt 41758903  T
Q  236 ctct 239  Q
    ||||    
T  41758904 ctct 41758907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 140 - 239
Target Start/End: Complemental strand, 44548473 - 44548374
Alignment:
Q  140 taatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    |||||||||||||||| |||||| |||||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  44548473 taatgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 44548374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 27564835 - 27564733
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||| | |||| |||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 27564736  T
Q  237 tct 239  Q
    |||    
T  27564735 tct 27564733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 47452420 - 47452318
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||||| |||| ||| |||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||    
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactttc 47452321  T
Q  237 tct 239  Q
    |||    
T  47452320 tct 47452318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 48716382 - 48716284
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    ||||||||||||||||||||| |||| |||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 48716284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 135 - 235
Target Start/End: Complemental strand, 38632423 - 38632323
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    ||||||||||||||||||||||| |||| |||||||||||| ||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  38632423 aagagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 38632324  T
Q  235 t 235  Q
    |    
T  38632323 t 38632323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 50630457 - 50630560
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    |||||||||||||||||| ||| |||| |||||||||| ||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  50630457 agagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 50630556  T
Q  236 ctct 239  Q
    ||||    
T  50630557 ctct 50630560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 134 - 239
Target Start/End: Original strand, 32813244 - 32813349
Alignment:
Q  134 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacact 233  Q
    ||||||| |||||||||||||| | |||| |||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||||||||||||||||    
T  32813244 aaagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacact 32813343  T
Q  234 ttctct 239  Q
    ||||||    
T  32813344 ttctct 32813349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 137 - 236
Target Start/End: Original strand, 37649198 - 37649297
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||| |||||| ||||||||||| |||||||||||||| ||||||||||||||| |||||||| |  ||||||||||||||||||    
T  37649198 gagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacactttc 37649297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 43132 - 43234
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||||||||||||||||||   ||||  | ||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttc 43231  T
Q  237 tct 239  Q
    |||    
T  43232 tct 43234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 11152476 - 11152378
Alignment:
Q  138 agtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttct 237  Q
    |||||||| ||||||||||||| || ||||||||||||||| |||| ||||| |||||||||||||||||||| || |||||||||||||||| ||||||    
T  11152476 agtaatgaaacatagacacctt-aggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcacgctttct 11152378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 235
Target Start/End: Complemental strand, 23597194 - 23597093
Alignment:
Q  134 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacact 233  Q
    |||||||||||||||||||||| | |||| ||||||||||| |||||| ||||||||||||||||||||||| | ||||| ||||  |||||| ||||||    
T  23597194 aaagagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgtggccacgttgaccttgcacaaacacact 23597095  T
Q  234 tt 235  Q
    ||    
T  23597094 tt 23597093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 167 - 239
Target Start/End: Original strand, 13414791 - 13414863
Alignment:
Q  167 caatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    ||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||| |||||||    
T  13414791 caatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacattttctct 13414863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 5959105 - 5958998
Alignment:
Q  132 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 231  Q
    ||||||||| |||||||||| ||||| |||  ||||||||||||  |||||||||||| |||||||||||| || ||||  ||||||||||||||| |||    
T  5959105 aaaaagagttatgatacataaacacccttaagtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtaca 5959006  T
Q  232 ctttctct 239  Q
    ||||||||    
T  5959005 ctttctct 5958998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 50591100 - 50590998
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| |||||||||| ||||| |||| ||||||||||||| |||||||||||| |||||||||||| || | ||  ||||||||||||||| ||||||||    
T  50591100 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 50591001  T
Q  237 tct 239  Q
    |||    
T  50591000 tct 50590998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 235
Target Start/End: Original strand, 26274430 - 26274530
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    |||| |||||||||||||||||| |||  |||||||||| | ||||||| ||||| ||||||||||||| |||||||||||| || ||||||| ||||||    
T  26274430 aagaataatgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaagtacactt 26274529  T
Q  235 t 235  Q
    |    
T  26274530 t 26274530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 144 - 239
Target Start/End: Original strand, 26440741 - 26440836
Alignment:
Q  144 gatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    |||| ||||||| | ||||||| ||||||||||||| ||||||||| ||||||||||||||| | ||| |||| |||||| |||||||||||||||    
T  26440741 gatagatagacatccttagatgacaatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcacactttctct 26440836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 37926539 - 37926436
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    ||||| |||||||||||| | |||||| |||||||||| | ||| ||||||||||||||||||||||||| | ||| |||| |||| ||||| |||||||    
T  37926539 agagttatgatacatagatatctttaggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacacttt 37926440  T
Q  236 ctct 239  Q
    ||||    
T  37926439 ctct 37926436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 49811629 - 49811525
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    |||||| |||||| ||||||| | |||| || ||||||||| ||||||| ||||| ||||||||||||||||| ||  | ||| ||||||||||||||||    
T  49811629 aagagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcacactt 49811530  T
Q  235 tctct 239  Q
    |||||    
T  49811529 tctct 49811525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 142 - 235
Target Start/End: Original strand, 44453984 - 44454077
Alignment:
Q  142 atgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    ||||||||||||||||||||  |||||||||| |  |||| ||||||| |||||||||||| || || ||||||| ||| ||||||||||||||    
T  44453984 atgatacatagacacctttaagtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacacttt 44454077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 45044638 - 45044558
Alignment:
Q  159 ttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    |||| |||||||||||| ||||||||||| | |||||||||||| |||| ||| |||||||||||||| |||| |||||||    
T  45044638 ttaggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacacattttctct 45044558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 41608593 - 41608491
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| |||||||||| ||| | |||| ||||||||||||| ||||||| |||| |||||||||||| || | ||  ||||||||| ||||| ||||||||    
T  41608593 gagttatgatacataaacatccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacactttc 41608494  T
Q  237 tct 239  Q
    |||    
T  41608493 tct 41608491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 237
Target Start/End: Original strand, 6260870 - 6260970
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| |||||| ||||| | | |||| ||| ||||||||| |  |||||||||||||||||| ||| || ||||||||||||||||| ||||||| ||||    
T  6260870 gagttatgatagatagatatccttaggtggtaatacacccctgaacacccacataaaaatctaacatgtggtcacgtggaccccgcataagcacattttc 6260969  T
Q  237 t 237  Q
    |    
T  6260970 t 6260970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 47748443 - 47748544
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| |||||||||| | ||| |||| ||||||||||||||| |||||||| |||||||||||||| || | ||  |||| |||||||||| | ||||||    
T  47748443 gagttatgatacataaatacccttaggtggcaatacaccctt-gacacccatataaaaatctgacatgtggccatatggatcccgcacaagtatactttc 47748541  T
Q  237 tct 239  Q
    |||    
T  47748542 tct 47748544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 237
Target Start/End: Original strand, 48489328 - 48489400
Alignment:
Q  164 tggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttct 237  Q
    ||||||||||||||  |||| ||||| |||||||||||| || |||||||||| |||||||||||||| |||||    
T  48489328 tggcaatacaccctg-gacatccacacaaaaatctgacatgtggtcacgtggatcccgcacaagcacattttct 48489400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 237
Target Start/End: Complemental strand, 3302633 - 3302533
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||| ||| | |||| || ||||| |  | | |||||||||| |||||||||||||||| |||  ||||||||  ||||||||||||||    
T  3302633 gagtaatgatacatatacatccttaggtgacaatatattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttc 3302534  T
Q  237 t 237  Q
    |    
T  3302533 t 3302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 232
Target Start/End: Complemental strand, 44334239 - 44334175
Alignment:
Q  168 aatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacac 232  Q
    ||||||| | |||||| ||||| ||||| ||||||||||||||| ||||||| |||||| |||||    
T  44334239 aatacacacattgacatccacacaaaaacctgacacgtagtcacatggacccagcacaaacacac 44334175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 750240 - 750301
Alignment:
Q  164 tggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaa 226  Q
    |||||||||||||||| ||||||||| |||| |||||||||| || || |||||||| |||||    
T  750240 tggcaatacacccttt-acacccacacaaaattctgacacgtggtaacatggaccccacacaa 750301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 5489941 - 5489880
Alignment:
Q  164 tggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaa 226  Q
    |||||||||||||||| |||||||||||||| |||||||||| |  || |||||||| |||||    
T  5489941 tggcaatacacccttt-acacccacataaaattctgacacgtggcaacttggaccccacacaa 5489880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 43571021 - 43571082
Alignment:
Q  164 tggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaa 226  Q
    |||||||||||||||| |||||||||||||| |||||||||| |  || |||||||| |||||    
T  43571021 tggcaatacacccttt-acacccacataaaattctgacacgtggcaacttggaccccacacaa 43571082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 48498897 - 48498958
Alignment:
Q  164 tggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaa 226  Q
    |||||||||||||||| |||||||||||||| |||||||||| |  || |||||||| |||||    
T  48498897 tggcaatacacccttt-acacccacataaaattctgacacgtggcaacttggaccccacacaa 48498958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 44332430 - 44332369
Alignment:
Q  178 ttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    ||||||||||||||||||||||||| || | |   ||||||||||||||| | |||||||||    
T  44332430 ttgacacccacataaaaatctgacatgtggccctatggaccccgcacaagtatactttctct 44332369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 1e-46; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 11511562 - 11511460
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 11511463  T
Q  237 tct 239  Q
    |||    
T  11511462 tct 11511460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 50052533 - 50052426
Alignment:
Q  132 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 231  Q
    |||||||||||||||||||||||| | |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  50052533 aaaaagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 50052434  T
Q  232 ctttctct 239  Q
    ||||||||    
T  50052433 ctttctct 50052426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 48183151 - 48183047
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  48183151 aagagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 48183052  T
Q  235 tctct 239  Q
    |||||    
T  48183051 tctct 48183047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 480552 - 480445
Alignment:
Q  132 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 231  Q
    |||||||||||||||||||||||||| |||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  480552 aaaaagagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcaca 480453  T
Q  232 ctttctct 239  Q
    ||||||||    
T  480452 ctttctct 480445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 24995209 - 24995105
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    ||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  24995209 aagagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacattt 24995110  T
Q  235 tctct 239  Q
    |||||    
T  24995109 tctct 24995105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 29234346 - 29234243
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||  || |||||||||||||||||||||||||||||||||||||||||||||    
T  29234346 agagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 29234247  T
Q  236 ctct 239  Q
    ||||    
T  29234246 ctct 29234243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 42044472 - 42044365
Alignment:
Q  132 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 231  Q
    |||||||||||||||||||||||||| |||| |||||||||| ||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42044472 aaaaagagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 42044373  T
Q  232 ctttctct 239  Q
    ||||||||    
T  42044372 ctttctct 42044365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 3481654 - 3481756
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactttc 3481753  T
Q  237 tct 239  Q
    |||    
T  3481754 tct 3481756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 6034044 - 6034146
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttc 6034143  T
Q  237 tct 239  Q
    |||    
T  6034144 tct 6034146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 41236347 - 41236449
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||||| |||| |||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 41236446  T
Q  237 tct 239  Q
    |||    
T  41236447 tct 41236449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 134 - 239
Target Start/End: Original strand, 29239883 - 29239988
Alignment:
Q  134 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacact 233  Q
    |||||||||||||||||||||||| |||| |||||||||||| ||||||| ||||| |||||||| ||||||||||||||||||||| ||||||||||||    
T  29239883 aaagagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacact 29239982  T
Q  234 ttctct 239  Q
    ||||||    
T  29239983 ttctct 29239988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 54473633 - 54473535
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    ||||||||||||||||||||| |||| || ||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacacttt 54473535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 23608233 - 23608337
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    ||||||||||||| ||||||||| ||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||| || || |||||||||||||    
T  23608233 aagagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacactt 23608332  T
Q  235 tctct 239  Q
    |||||    
T  23608333 tctct 23608337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 137 - 237
Target Start/End: Complemental strand, 50526271 - 50526171
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||  |||||||||||| |||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgctttc 50526172  T
Q  237 t 237  Q
    |    
T  50526171 t 50526171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 31910192 - 31910294
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| |||||||||||||| | |||| || |||||||| |||||||||||||| ||||||||||||| ||| ||| ||||||||||||||||||||||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacactttc 31910291  T
Q  237 tct 239  Q
    |||    
T  31910292 tct 31910294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 29977883 - 29977987
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    ||||||||||||||||| | | |  ||| ||||||||||||| || ||||||||| ||||||||||||||||||||  |||||||| |||||||||||||    
T  29977883 aagagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactt 29977982  T
Q  235 tctct 239  Q
    |||||    
T  29977983 tctct 29977987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 19670820 - 19670714
Alignment:
Q  133 aaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacac 232  Q
    |||||||| |||||||||| ||||| |||| ||||||||||||| ||||||| |||| |||||||||||| || | ||  ||||||||||||||| ||||    
T  19670820 aaaagagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtacac 19670721  T
Q  233 tttctct 239  Q
    |||||||    
T  19670720 tttctct 19670714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 175 - 239
Target Start/End: Original strand, 41823920 - 41823984
Alignment:
Q  175 cctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41823920 cctttaacacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctct 41823984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 40574779 - 40574881
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| |||||||||||||| | |||| ||| |||||||||||||||||||||| ||||||||||||||  |  || |||| |||| ||||||||||||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgctgctacatggatcccgaacaagcacactttc 40574878  T
Q  237 tct 239  Q
    |||    
T  40574879 tct 40574881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 53352660 - 53352564
Alignment:
Q  142 atgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    |||||||||||||||| |||| || |||||||  |||| ||||| ||| |||||||||||||||||| | |||||||||||||||||| |||||||||    
T  53352660 atgatacatagacacccttaggtg-caatacattctttaacacctacacaaaaatctgacacgtagttaagtggaccccgcacaagcatactttctct 53352564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 55475189 - 55475293
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    |||||| |||||||||| ||| | |||| |||||||||||||||||||||||||| |||||||||||| || | ||  ||||||| ||| ||| ||||||    
T  55475189 aagagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtggccatatggaccctgcataagtacactt 55475288  T
Q  235 tctct 239  Q
    |||||    
T  55475289 tctct 55475293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 47986207 - 47986310
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    ||||| |||||||||| ||||| |||| |||||||||| || |||||| ||||| |||||||||||| || | ||  ||||||||||||||| |||||||    
T  47986207 agagttatgatacataaacacccttaggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 47986306  T
Q  236 ctct 239  Q
    ||||    
T  47986307 ctct 47986310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 50813993 - 50813890
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    ||||| |||||||||| ||||  |||| ||| ||||||||| |||||||||||| |||||||||||| || ||||  || |||||||||||| |||||||    
T  50813993 agagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacacttt 50813894  T
Q  236 ctct 239  Q
    ||||    
T  50813893 ctct 50813890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 17983821 - 17983741
Alignment:
Q  159 ttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    |||| ||||||||||||| |||||||||||| |||||||||||| || | ||  ||||||||||||||| |||||||||||    
T  17983821 ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 17983741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 32766956 - 32767060
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    |||||| |||||||||| ||||  |||| ||||||||||||| |||||||||| | |||||||||||| || | ||  ||||||| ||||||| ||||||    
T  32766956 aagagttatgatacataaacactcttaggtggcaatacaccccttgacacccatacaaaaatctgacatgtggccatatggaccctgcacaagtacactt 32767055  T
Q  235 tctct 239  Q
    |||||    
T  32767056 tctct 32767060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 239
Target Start/End: Complemental strand, 48647796 - 48647724
Alignment:
Q  167 caatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    |||||||||  || |||||||||||||||||| |||||| ||||||||||| ||||||||||||| |||||||    
T  48647796 caatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcacaatttctct 48647724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 8343263 - 8343161
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| |||||||||| ||| | |||| |||||||||| ||||||||||| |||||||||||||||| || | ||  ||||||||||| ||| | ||||||    
T  8343263 gagttatgatacataaacatccttaggtggcaatacatcctttgacacctacataaaaatctgacatgtggccatatggaccccgcataagtatactttc 8343164  T
Q  237 tct 239  Q
    |||    
T  8343163 tct 8343161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 44536846 - 44536744
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    ||||| |||||||||| |||| ||||| ||||||||||||| |||||| ||||| |||||||||||| || ||||  | |||||| || ||| |||||||    
T  44536846 agagttatgatacataaacacttttaggtggcaatacaccc-ttgacatccacacaaaaatctgacatgtggtcatatagaccccacataagtacacttt 44536748  T
Q  236 ctct 239  Q
    ||||    
T  44536747 ctct 44536744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 28480369 - 28480267
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    ||||| || ||||||||||| | |||| || ||||||||   || |||| |||| |||||||||||| ||||||| ||||||||| ||||| ||||||||    
T  28480369 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28480270  T
Q  236 ctc 238  Q
    |||    
T  28480269 ctc 28480267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 28481244 - 28481142
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    ||||| || ||||||||||| | |||| || ||||||||   || |||| |||| |||||||||||| ||||||| ||||||||| ||||| ||||||||    
T  28481244 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28481145  T
Q  236 ctc 238  Q
    |||    
T  28481144 ctc 28481142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Complemental strand, 28482119 - 28482017
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    ||||| || ||||||||||| | |||| || ||||||||   || |||| |||| |||||||||||| ||||||| ||||||||| ||||| ||||||||    
T  28482119 agagttataatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacacttt 28482020  T
Q  236 ctc 238  Q
    |||    
T  28482019 ctc 28482017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 235
Target Start/End: Complemental strand, 29548061 - 29547961
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    |||||| |||||||||| ||| | |||| |||||||||| || |||||||||||| |||||||||||| || | ||  |||| |||||| ||| ||||||    
T  29548061 aagagttatgatacataaacatccttaggtggcaatacatcccttgacacccacacaaaaatctgacatgtggccatatggatcccgcataagtacactt 29547962  T
Q  235 t 235  Q
    |    
T  29547961 t 29547961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 47104542 - 47104646
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    ||||||||||||| |||||||   ||||||| |||||||| || ||||||||||| |||||| |||||||| ||    | |||||| ||||| |||||||    
T  47104542 aagagtaatgatatatagacattcttagatgacaatacactctctgacacccacacaaaaatttgacacgtggttttattgaccccacacaaacacactt 47104641  T
Q  235 tctct 239  Q
    |||||    
T  47104642 tctct 47104646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 55079814 - 55079711
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtgga-ccccgcacaagcacacttt 235  Q
    |||| |||||||||| ||||| |||| ||||||||||||  |||||||||| | |||||||||||| || | ||  |||| |||| |||||| |||||||    
T  55079814 gagttatgatacataaacacccttaggtggcaatacacctcttgacacccatacaaaaatctgacatgtggccatatggacccccacacaagtacacttt 55079715  T
Q  236 ctct 239  Q
    ||||    
T  55079714 ctct 55079711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 239
Target Start/End: Complemental strand, 29589831 - 29589738
Alignment:
Q  145 atacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    ||||||| ||||| |||| || |||||||||| |||||||||||| |||||||||| | || | ||  |||||||| |||||| |||||||||||    
T  29589831 atacataaacacccttagttg-caatacaccccttgacacccacacaaaaatctgatatgtggccatatggaccccacacaagtacactttctct 29589738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 2e-45; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 8080485 - 8080381
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8080485 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 8080386  T
Q  235 tctct 239  Q
    |||||    
T  8080385 tctct 8080381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 7389387 - 7389491
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    ||||||||||||||||||||||| |||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7389387 aagagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 7389486  T
Q  235 tctct 239  Q
    |||||    
T  7389487 tctct 7389491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 36362014 - 36361911
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    |||||||||||||||||||||| |||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  36362014 agagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36361915  T
Q  236 ctct 239  Q
    ||||    
T  36361914 ctct 36361911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 4999614 - 4999512
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttc 4999515  T
Q  237 tct 239  Q
    |||    
T  4999514 tct 4999512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 38267040 - 38267142
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||||| |||  || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38267040 gagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 38267139  T
Q  237 tct 239  Q
    |||    
T  38267140 tct 38267142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 38837213 - 38837319
Alignment:
Q  133 aaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacac 232  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||  ||||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  38837213 aaaagagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 38837312  T
Q  233 tttctct 239  Q
    |||||||    
T  38837313 tttctct 38837319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 3434561 - 3434664
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    |||||||||||||||||||| | |||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||    
T  3434561 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacacttt 3434660  T
Q  236 ctct 239  Q
    ||||    
T  3434661 ctct 3434664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 35137528 - 35137635
Alignment:
Q  132 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 231  Q
    |||| ||||||||||| ||||||||| |||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||    
T  35137528 aaaatgagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacaca 35137627  T
Q  232 ctttctct 239  Q
    ||||||||    
T  35137628 ctttctct 35137635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 36362025 - 36362128
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    |||||||||||||||||||||| |||| ||| |||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  36362025 agagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 36362124  T
Q  236 ctct 239  Q
    ||||    
T  36362125 ctct 36362128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 19329842 - 19329944
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||| | |||| |||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttc 19329941  T
Q  237 tct 239  Q
    |||    
T  19329942 tct 19329944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 140 - 239
Target Start/End: Original strand, 3783998 - 3784097
Alignment:
Q  140 taatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    |||||||||||||||||| |||| |||||||||| | ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3783998 taatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctct 3784097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 134 - 239
Target Start/End: Original strand, 40957704 - 40957809
Alignment:
Q  134 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacact 233  Q
    |||||||||||||||||||||||  |||| ||||||||||| |||||| ||||||| |||||||||||||||||||||||||| |||| |||||||||||    
T  40957704 aaagagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacact 40957803  T
Q  234 ttctct 239  Q
    ||||||    
T  40957804 ttctct 40957809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 19436289 - 19436185
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    ||||||||||||||||||||| | |||| || ||||||||| ||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||    
T  19436289 aagagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactt 19436190  T
Q  235 tctct 239  Q
    |||||    
T  19436189 tctct 19436185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 239
Target Start/End: Complemental strand, 32951592 - 32951491
Alignment:
Q  138 agtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttct 237  Q
    |||||||||||||||||||  ||||||| ||||||| ||||| ||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  32951592 agtaatgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttct 32951493  T
Q  238 ct 239  Q
    ||    
T  32951492 ct 32951491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 8238207 - 8238315
Alignment:
Q  132 aaaaagagtaatgatacatagacacctt-tagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcac 230  Q
    |||| |||| |||||||||| ||||| | ||| |||||||||||||||||||||||||| |||||||||||| |||||||  ||||||||||||||| ||    
T  8238207 aaaatgagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtac 8238306  T
Q  231 actttctct 239  Q
    |||||||||    
T  8238307 actttctct 8238315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 140 - 239
Target Start/End: Original strand, 3694370 - 3694469
Alignment:
Q  140 taatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    |||||||| ||| ||||| |||| || ||||||||| ||| ||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  3694370 taatgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctct 3694469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 38044195 - 38044299
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    |||||| |||||||||| ||||| |||| ||||||||||||| |||||| ||||| |||||||||||| |||| ||  ||||||||||||||| ||||||    
T  38044195 aagagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacactt 38044294  T
Q  235 tctct 239  Q
    |||||    
T  38044295 tctct 38044299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 35468960 - 35468853
Alignment:
Q  132 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 231  Q
    |||||||||||||||||||||||| | ||||||||||||||| | |||||||||||||||||||||| | | ||   || |||||||| |||||| ||||    
T  35468960 aaaaagagtaatgatacatagacatccttagatggcaatacatcatttgacacccacataaaaatctaatatgtgaccatgtggaccctgcacaaacaca 35468861  T
Q  232 ctttctct 239  Q
    ||||||||    
T  35468860 ctttctct 35468853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 134 - 239
Target Start/End: Original strand, 11044185 - 11044280
Alignment:
Q  134 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacact 233  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||||||||          ||||||||||||||||||||||||||||||| |||||    
T  11044185 aaagagtaatgatacatagacacccttaggtggcaatacatcctttgacaccc----------ctgacacgtagtcacgtggaccccgcacaagtacact 11044274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 21234401 - 21234503
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| |||||||||||||| | |||| || |||||||||||||||||| |||| |||||| |||||||||| ||| || |||||||||||||||| ||||    
T  21234401 gagttatgatacatagacatccttaggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattttc 21234500  T
Q  237 tct 239  Q
    |||    
T  21234501 tct 21234503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 231
Target Start/End: Complemental strand, 46374902 - 46374808
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 231  Q
    |||| |||||||||||||| | |||| |||||| ||||||||| ||||||||| ||||||||||||||| | ||| |||||||||||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 36208171 - 36208275
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    |||||| |||||||||||||||| |||| ||| ||||||  | |||||||||||| ||||| |||||| || ||||||||||||| ||||||||||| ||    
T  36208171 aagagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattt 36208270  T
Q  235 tctct 239  Q
    |||||    
T  36208271 tctct 36208275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 22343360 - 22343463
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    ||||| |||||||||| ||||| |||| ||||||||||||| |||||||||||| |||||||||||| ||   ||  ||||||||||||||| |||||||    
T  22343360 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacacttt 22343459  T
Q  236 ctct 239  Q
    ||||    
T  22343460 ctct 22343463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 41915740 - 41915843
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    ||||| |||||||||| ||||| |||| ||||||||||||| |||||||| ||| |||||||||||| || | ||  ||||||||||||||| |||||||    
T  41915740 agagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 41915839  T
Q  236 ctct 239  Q
    ||||    
T  41915840 ctct 41915843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 46033902 - 46033799
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    ||||| |||||||||||| |   |||| |||||||||||||||| ||||||||||||||||||||||||| ||||| || || ||||||||||| | |||    
T  46033902 agagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagcatatttt 46033803  T
Q  236 ctct 239  Q
    ||||    
T  46033802 ctct 46033799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 131 - 237
Target Start/End: Original strand, 7727900 - 7728006
Alignment:
Q  131 caaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcac 230  Q
    |||||||||| |||||||||| ||||| |||| ||| ||||||||  ||||||  ||||||||||||||||| || ||||  ||||||||||||||| ||    
T  7727900 caaaaagagttatgatacataaacacccttaggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaagtac 7727999  T
Q  231 actttct 237  Q
    |||||||    
T  7728000 actttct 7728006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 18207176 - 18207281
Alignment:
Q  133 aaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacac 232  Q
    |||||||| |||||||||||||| | |||| ||||||||||||  |||||||||| | |||||||| |||||| | |||||| ||||| |||||||||||    
T  18207176 aaaagagttatgatacatagacaaccttaggtggcaatacacctcttgacacccatacaaaaatctaacacgt-ggcacgtgaaccccacacaagcacac 18207274  T
Q  233 tttctct 239  Q
    |||||||    
T  18207275 tttctct 18207281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 35522881 - 35522978
Alignment:
Q  142 atgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    |||||||||||||| | |||  |||||||||||| ||| ||||||||| ||||||||||||||| | ||  |||| ||||||||||||||||||||||    
T  35522881 atgatacatagacatccttaagtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttctct 35522978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 26296643 - 26296746
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    ||||| |||||||||||||| | |||| || ||||| ||||||| ||| |||||||||||||||| |||| | ||  |||||||||||||||| || |||    
T  26296643 agagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagcgcatttt 26296742  T
Q  236 ctct 239  Q
    ||||    
T  26296743 ctct 26296746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 39256023 - 39255922
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| |||||||||||||| | |||| ||||||||||||  |||| ||||| | ||||||||||||||| | ||||||||| || |||||| ||||||||    
T  39256023 gagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgt-ggcacgtggactccacacaagaacactttc 39255925  T
Q  237 tct 239  Q
    |||    
T  39255924 tct 39255922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 40846213 - 40846111
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| |||||||||| ||| | |||| ||||||||||||| |||||| ||||| |||||||| ||| ||||| |  ||||||||||||||  ||||||||    
T  40846213 gagttatgatacataaacatccttaggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaatacactttc 40846114  T
Q  237 tct 239  Q
    |||    
T  40846113 tct 40846111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 10343666 - 10343597
Alignment:
Q  134 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacac 203  Q
    |||||||||||||||||||||||| |||| ||| |||||||   |||||||||||| |||||||||||||    
T  10343666 aaagagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgacac 10343597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 32564526 - 32564424
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| |||||||||| |||   |||| ||||||||||||| |||||||||||| |||||||||||| || |  |  ||||||||||||||  ||||||||    
T  32564526 gagttatgatacataaacattcttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaaatacactttc 32564427  T
Q  237 tct 239  Q
    |||    
T  32564426 tct 32564424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 41423682 - 41423784
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| |||||||||||||| | |||||||| ||||||||  |||||||  ||| |||||||||||| || ||||||| || |||| ||||||| | ||||    
T  41423682 gagttatgatacatagacatcattagatggtaatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagcatattttc 41423781  T
Q  237 tct 239  Q
    |||    
T  41423782 tct 41423784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 239
Target Start/End: Complemental strand, 16374894 - 16374822
Alignment:
Q  167 caatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    ||||||| || |||||| ||||| ||||||||||||||| |||||||||| | | ||||||||||| ||||||    
T  16374894 caatacatcccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcacacattctct 16374822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 239
Target Start/End: Complemental strand, 27744375 - 27744307
Alignment:
Q  171 acaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    ||||||||||| ||||||| |||||||||||| || | |||||||| ||| || ||||||| |||||||    
T  27744375 acaccctttgatacccacacaaaaatctgacatgtggccacgtggatccctcataagcacattttctct 27744307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 31735884 - 31735979
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| |||||||||||||| | |||| ||||||||||| |||| ||||||||| ||       |||||| | ||| |||| |||||||||||||||||||    
T  31735884 gagttatgatacatagacatccttaggtggcaatacactctttaacacccacacaa-------acacgtggccacatggatcccgcacaagcacactttc 31735976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 239
Target Start/End: Complemental strand, 2318316 - 2318241
Alignment:
Q  164 tggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    |||||| |||||  |||||||||||| |||||||||||  || |||||||||||||  || ||||| |||||||||    
T  2318316 tggcaagacacctcttgacacccacacaaaaatctgacgtgtggtcacgtggacccgacataagcatactttctct 2318241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 26898337 - 26898398
Alignment:
Q  164 tggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaa 226  Q
    |||||||||||| ||| |||||||||||||| |||||||||| || || |||||||| |||||    
T  26898337 tggcaatacacctttt-acacccacataaaattctgacacgtggtaacctggaccccacacaa 26898398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 44326343 - 44326303
Alignment:
Q  164 tggcaatacaccctttgacacccacataaaaatctgacacgt 205  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  44326343 tggcaatacacccttt-acacccacataaaattctgacacgt 44326303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 8e-45; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 18520989 - 18520882
Alignment:
Q  132 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 231  Q
    ||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18520989 aaaaagaataatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 18520890  T
Q  232 ctttctct 239  Q
    ||||||||    
T  18520889 ctttctct 18520882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 131 - 237
Target Start/End: Original strand, 14831808 - 14831914
Alignment:
Q  131 caaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcac 230  Q
    ||||| ||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  14831808 caaaatgagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcac 14831907  T
Q  231 actttct 237  Q
    |||||||    
T  14831908 actttct 14831914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 36733044 - 36732940
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    ||||||||||||||||||||||| |||| | |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  36733044 aagagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactt 36732945  T
Q  235 tctct 239  Q
    |||||    
T  36732944 tctct 36732940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 2740273 - 2740376
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    |||||||||||||||||||| | |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  2740273 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 2740372  T
Q  236 ctct 239  Q
    ||||    
T  2740373 ctct 2740376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 13811648 - 13811754
Alignment:
Q  133 aaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacac 232  Q
    |||||||||| |||||||||||||| |||| |||||||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  13811648 aaaagagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacac 13811747  T
Q  233 tttctct 239  Q
    |||||||    
T  13811748 tttctct 13811754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 40145407 - 40145509
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||||| |||| |||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 40145506  T
Q  237 tct 239  Q
    |||    
T  40145507 tct 40145509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 33149738 - 33149636
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||||| |||| ||| |||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||    
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 33149639  T
Q  237 tct 239  Q
    |||    
T  33149638 tct 33149636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 42414402 - 42414304
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  42414402 gagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacacttt 42414304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 35785199 - 35785301
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||||| |||| |||||||||||| ||||||||||||| |||||||||||||||||| ||||||| ||||||||| |||||||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactttc 35785298  T
Q  237 tct 239  Q
    |||    
T  35785299 tct 35785301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 28177775 - 28177877
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| |||||||||||||| | |||| |||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||| |||||||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactttc 28177874  T
Q  237 tct 239  Q
    |||    
T  28177875 tct 28177877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 6679697 - 6679800
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    ||||| |||||||||||||| |||||| |||||||||||| ||||||||||||| ||||||||||||||| ||||| |||||||||||||| |||| |||    
T  6679697 agagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacatttt 6679796  T
Q  236 ctct 239  Q
    ||||    
T  6679797 ctct 6679800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 35943992 - 35943890
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| |||||||||||||||| |||| |||||||||| | ||||||||||||| |||||||||||||||||| ||||||| ||| |||||||||||||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttc 35943893  T
Q  237 tct 239  Q
    |||    
T  35943892 tct 35943890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 15409712 - 15409608
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    |||||| |||||||||||||| | |||| || |||||||  |||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||     
T  15409712 aagagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactc 15409613  T
Q  235 tctct 239  Q
    |||||    
T  15409612 tctct 15409608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 136 - 228
Target Start/End: Complemental strand, 41470517 - 41470425
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagc 228  Q
    |||||||| |||||||||||||||||| |||||||||| ||||| | |  || ||||||||||||||||||||||||||||||||||||||||    
T  41470517 agagtaataatacatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgtagtcacgtggaccccgcacaagc 41470425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 26720516 - 26720618
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| |||||||||||||| | |||| |||||||||||||||| ||||| ||| ||||||||||||||| | ||| |||| |||||||||||||||||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26720615  T
Q  237 tct 239  Q
    |||    
T  26720616 tct 26720618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 26990265 - 26990367
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| |||||||||||||| | |||| |||||||||||||||| ||||| ||| ||||||||||||||| | ||| |||| |||||||||||||||||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttc 26990364  T
Q  237 tct 239  Q
    |||    
T  26990365 tct 26990367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 239
Target Start/End: Complemental strand, 3921368 - 3921263
Alignment:
Q  134 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacact 233  Q
    ||||||| |||||||||| ||||| |||| ||||||||||||| |||||||||||| |||||||||||| || | ||  ||||||||||||||| |||||    
T  3921368 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 3921269  T
Q  234 ttctct 239  Q
    ||||||    
T  3921268 ttctct 3921263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 137 - 237
Target Start/End: Complemental strand, 20073616 - 20073516
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||| ||||||| | ||||||| |||||||||||||||||| |||||||||||||  |||||   ||||||||||| ||||||||||||||||    
T  20073616 gagtaatgatatatagacatcattagatgacaatacaccctttgacactcacataaaaatcttgcacgtgaccacgtggaccctgcacaagcacactttc 20073517  T
Q  237 t 237  Q
    |    
T  20073516 t 20073516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 31008984 - 31009088
Alignment:
Q  133 aaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacac 232  Q
    |||||||| |||||||||| ||| | |||| || |||||||  |||  ||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  31008984 aaaagagttatgatacataaacatccttaggtgacaatacattcttccacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacac 31009083  T
Q  233 tttct 237  Q
    |||||    
T  31009084 tttct 31009088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 36875708 - 36875610
Alignment:
Q  132 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 231  Q
    ||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||         |||||||||||| ||||||||||||||    
T  36875708 aaaaaaagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaa---------tagtcacgtggatcccgcacaagcaca 36875618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 2252269 - 2252166
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    ||||| |||||||||| ||| | |||| ||||||||||||| |||||||||||| |||||||||||| || | ||  ||||||||||||||| |||||||    
T  2252269 agagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 2252170  T
Q  236 ctct 239  Q
    ||||    
T  2252169 ctct 2252166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 33825424 - 33825322
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||||||||| ||||||||   |||| ||||||||||| | ||||||||||||||||||||||||||||  ||| ||| |||   |||||||||||||||    
T  33825424 gagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcacactttc 33825325  T
Q  237 tct 239  Q
    |||    
T  33825324 tct 33825322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 235
Target Start/End: Original strand, 16327902 - 16327999
Alignment:
Q  138 agtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    |||||||||| ||| | | | |||| |||||||||| || ||||||||||||||||||||||||||||  ||| ||| ||| | ||||||||||||||    
T  16327902 agtaatgatagataaatatccttaggtggcaatacatccattgacacccacataaaaatctgacacgtgttcatgtgcacctcacacaagcacacttt 16327999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 39688999 - 39688895
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    |||||| |||||||||| ||||| |||  |||||||||| || |||||||||||| |||||||||| | || ||||  || |||||||| ||| ||||||    
T  39688999 aagagttatgatacataaacacccttaagtggcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgcataagtacactt 39688900  T
Q  235 tctct 239  Q
    |||||    
T  39688899 tctct 39688895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 6260101 - 6259999
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||| ||| |  ||| || ||||||||||||| ||||||||  |||||||| |||| | ||||| |||||| | || ||||||||||||    
T  6260101 gagtaatgatacatacacaaccataggtgacaatacaccctttaacacccacgcaaaaatctaacacatggtcacatggacctcacagaagcacactttc 6260002  T
Q  237 tct 239  Q
    |||    
T  6260001 tct 6259999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 31132392 - 31132442
Alignment:
Q  185 ccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    ||||| |||||||||||| |||||||||||||||||||||||||| |||||    
T  31132392 ccacacaaaaatctgacaagtagtcacgtggaccccgcacaagcatacttt 31132442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 21370048 - 21370106
Alignment:
Q  181 acacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    ||||||||  |||||||||||| || |||||||||||||||||||| |||| |||||||    
T  21370048 acacccactcaaaaatctgacatgtggtcacgtggaccccgcacaaacacattttctct 21370106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 9603811 - 9603915
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    ||||||||||||||||| ||| | |||| ||  ||||||| | || ||||| ||| ||||||||||||| | ||||  ||||||||  |||| |||||||    
T  9603811 aagagtaatgatacatatacatccttaggtgataatacactcattcacacctacacaaaaatctgacacatggtcatatggaccccatacaatcacactt 9603910  T
Q  235 tctct 239  Q
    |||||    
T  9603911 tctct 9603915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 38296200 - 38296304
Alignment:
Q  134 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacact 233  Q
    ||||||| |||||||||||||    |||| || |||||||||  || | ||||||| ||||||| |||||||||  ||||||| ||  ||||||||||||    
T  38296200 aaagagttatgatacatagactatcttaggtgtcaatacacctcttaatacccacacaaaaatcagacacgtagctacgtggatccaacacaagcacact 38296299  T
Q  234 ttctc 238  Q
    |||||    
T  38296300 ttctc 38296304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 200
Target Start/End: Original strand, 10356639 - 10356698
Alignment:
Q  142 atgatacatagacacctttagatggcaataca-ccctttgacacccacataaaaatctga 200  Q
    |||||||||||||| | |||| |||||||||| ||| |||||||||||| ||||||||||    
T  10356639 atgatacatagacatccttaggtggcaatacatcccattgacacccacacaaaaatctga 10356698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 8e-45; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 7465836 - 7465733
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  7465836 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 7465737  T
Q  236 ctct 239  Q
    ||||    
T  7465736 ctct 7465733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 17473020 - 17473122
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttc 17473119  T
Q  237 tct 239  Q
    |||    
T  17473120 tct 17473122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 33436204 - 33436098
Alignment:
Q  133 aaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacac 232  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  33436204 aaaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacac 33436105  T
Q  233 tttctct 239  Q
    |||||||    
T  33436104 tttctct 33436098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 9058478 - 9058582
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  9058478 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 9058577  T
Q  235 tctct 239  Q
    |||||    
T  9058578 tctct 9058582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 30915461 - 30915565
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  30915461 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactt 30915560  T
Q  235 tctct 239  Q
    |||||    
T  30915561 tctct 30915565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 5574589 - 5574486
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    |||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5574589 agagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 5574490  T
Q  236 ctct 239  Q
    ||||    
T  5574489 ctct 5574486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 140 - 239
Target Start/End: Original strand, 28863458 - 28863557
Alignment:
Q  140 taatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28863458 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 28863557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 10249484 - 10249380
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    ||||||||||||||||||||||| |||| || ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10249484 aagagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 10249385  T
Q  235 tctct 239  Q
    |||||    
T  10249384 tctct 10249380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 13438343 - 13438445
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||||| |||| || ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 13438442  T
Q  237 tct 239  Q
    |||    
T  13438443 tct 13438445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 136 - 237
Target Start/End: Complemental strand, 32505749 - 32505648
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    |||||||||||||||||||||| |||| || ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32505749 agagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 32505650  T
Q  236 ct 237  Q
    ||    
T  32505649 ct 32505648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 40701478 - 40701580
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||||| |||| |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttc 40701577  T
Q  237 tct 239  Q
    |||    
T  40701578 tct 40701580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 140 - 239
Target Start/End: Complemental strand, 19930917 - 19930818
Alignment:
Q  140 taatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    |||||||||||||||||| |||| |||||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  19930917 taatgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctct 19930818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 20700811 - 20700917
Alignment:
Q  133 aaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacac 232  Q
    ||||||||||||||||||||||| | |||  ||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||| ||||||||    
T  20700811 aaaagagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacac 20700910  T
Q  233 tttctct 239  Q
    |||||||    
T  20700911 tttctct 20700917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 27864704 - 27864806
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||||| |||  |||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||| ||||||||||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtggaccccgcaaaagcacactttc 27864803  T
Q  237 tct 239  Q
    |||    
T  27864804 tct 27864806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 28381755 - 28381653
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||||| |||| |||||||||||| || |||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacactttc 28381656  T
Q  237 tct 239  Q
    |||    
T  28381655 tct 28381653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 42257189 - 42257295
Alignment:
Q  133 aaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacac 232  Q
    |||||||| |||||||||||||| |||||| |||||||||| | ||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||    
T  42257189 aaaagagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacac 42257288  T
Q  233 tttctct 239  Q
    |||||||    
T  42257289 tttctct 42257295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 38273246 - 38273140
Alignment:
Q  133 aaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacac 232  Q
    |||||||| ||||||||||||||   ||||||||||||||||||||| ||||||||| ||||||||||||||||| ||| |||||||||||| |||||||    
T  38273246 aaaagagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcacac 38273147  T
Q  233 tttctct 239  Q
    |||||||    
T  38273146 tttctct 38273140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 40614002 - 40613900
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| |||||||||||||| | |||| |||||||||||||||||||||||||| ||||||||||||||| | ||| ||||||||||||||||||||||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactttc 40613903  T
Q  237 tct 239  Q
    |||    
T  40613902 tct 40613900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 134 - 239
Target Start/End: Complemental strand, 38882916 - 38882809
Alignment:
Q  134 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtgga---ccccgcacaagcac 230  Q
    |||||||||||||||||||||||| |||| |||||||| ||||||||||| ||||| ||||||||||||||||||||||||||   |||||||||||| |    
T  38882916 aaagagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtggacccccccgcacaagcgc 38882818  T
Q  231 actttctct 239  Q
    |||||||||    
T  38882817 actttctct 38882809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 137 - 237
Target Start/End: Original strand, 4060685 - 4060785
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||||| |||| || ||||||||| ||||||| ||||| |||||||||||||||||| ||||||| |||||| ||||||||||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4060784  T
Q  237 t 237  Q
    |    
T  4060785 t 4060785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 33436210 - 33436313
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    |||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||   || ||||||   |||||||||||||||    
T  33436210 agagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgtgaccatgtggactttgcacaagcacacttt 33436309  T
Q  236 ctct 239  Q
    ||||    
T  33436310 ctct 33436313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 239
Target Start/End: Complemental strand, 26891607 - 26891502
Alignment:
Q  134 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacact 233  Q
    ||||||| ||||||||||| |||| |||| ||||||||||||| | |||||||||| |||||||||||| || |||||||||||| || ||||||||| |    
T  26891607 aaagagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtggacctcgaacaagcacatt 26891508  T
Q  234 ttctct 239  Q
    ||||||    
T  26891507 ttctct 26891502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 17820104 - 17820002
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| |||||||||||||| || ||| ||||||||||||| |||||||||||| |||||||||||| || || ||||||||||| ||||| |||| ||||    
T  17820104 gagttatgatacatagacaactataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacacattttc 17820005  T
Q  237 tct 239  Q
    |||    
T  17820004 tct 17820002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 2533123 - 2533221
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    ||||| |||||||||||||| | |||  |||||||||| ||||||||||| ||| ||||||||||||||||| ||| | |||||||||||||||||||||    
T  2533123 agagttatgatacatagacatccttaagtggcaatacatcctttgacacc-acacaaaaatctgacacgtagccacatagaccccgcacaagcacacttt 2533221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 36168835 - 36168938
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    ||||| |||||||||||||| | ||||||| ||||||| ||||| || |||||| |||||| |||||||| | ||| ||||||||||||||||| |||||    
T  36168835 agagttatgatacatagacatccttagatgacaatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatacttt 36168934  T
Q  236 ctct 239  Q
    ||||    
T  36168935 ctct 36168938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 138 - 239
Target Start/End: Original strand, 41575138 - 41575240
Alignment:
Q  138 agtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggacccc-gcacaagcacactttc 236  Q
    |||||||||||||||||| | |||||||| ||||||||||||||||  |||| |||||| ||||| || |||| |||||||||  |||||||||||||||    
T  41575138 agtaatgatacatagacatccttagatggtaatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttc 41575237  T
Q  237 tct 239  Q
    |||    
T  41575238 tct 41575240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 45097840 - 45097733
Alignment:
Q  132 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 231  Q
    ||||||||| |||||||||| ||| | |||| |||||||||| || |||||||||| | |||||||||||| || | ||  ||||||||||||||| |||    
T  45097840 aaaaagagttatgatacataaacatccttaggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtaca 45097741  T
Q  232 ctttctct 239  Q
    ||||||||    
T  45097740 ctttctct 45097733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 13365346 - 13365455
Alignment:
Q  132 aaaaagagtaatgatacatagacac--ctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagca 229  Q
    ||||||||| |||||||||| ||||  | ||||||||||||| |||| |||||||||||| |||||||||||| ||   ||  ||||||||||||||| |    
T  13365346 aaaaagagttatgatacataaacacacccttagatggcaatataccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagta 13365445  T
Q  230 cactttctct 239  Q
    ||||||||||    
T  13365446 cactttctct 13365455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 38732354 - 38732456
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| |||||||||| ||||| |||  || ||||||| || |||||||||||| |||||||||||| || ||||  ||||||||||||||| ||||||||    
T  38732354 gagttatgatacataaacacccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttc 38732453  T
Q  237 tct 239  Q
    |||    
T  38732454 tct 38732456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 43490121 - 43490219
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    |||| |||||||||| ||||| |||| || |||||||||| |||||||||||| |||||||||||| || | ||  ||||||||||||||| |||||||    
T  43490121 gagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacacttt 43490219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 2997565 - 2997485
Alignment:
Q  159 ttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    |||| ||||||||||||| |||||||||||| |||||||||||| || | ||  ||||||||||||||| |||||||||||    
T  2997565 ttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 2997485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 143 - 239
Target Start/End: Original strand, 3439985 - 3440081
Alignment:
Q  143 tgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    |||||| |||||||| |||| ||||||||||| | | |||||||||| |||||||| ||| ||  | |||||||||||||||||||||| |||||||    
T  3439985 tgatacgtagacacccttaggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcacattttctct 3440081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 3737986 - 3738043
Alignment:
Q  180 gacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttct 237  Q
    |||||||||| |||||||||||| || |||| |||||||||||||||||||| |||||    
T  3737986 gacacccacacaaaaatctgacatgtggtcatgtggaccccgcacaagcacattttct 3738043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 135 - 206
Target Start/End: Original strand, 17823782 - 17823853
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgta 206  Q
    ||||||||||||||||| ||| | |||| ||||||||||  | |  ||||||||| ||||||||||||||||    
T  17823782 aagagtaatgatacatatacatccttaggtggcaatacattcctgaacacccacacaaaaatctgacacgta 17823853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 3e-44; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 53982011 - 53982113
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 53982110  T
Q  237 tct 239  Q
    |||    
T  53982111 tct 53982113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 27714993 - 27714889
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  27714993 aagagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactt 27714894  T
Q  235 tctct 239  Q
    |||||    
T  27714893 tctct 27714889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 33644200 - 33644302
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||||| || | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 33644299  T
Q  237 tct 239  Q
    |||    
T  33644300 tct 33644302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 49607410 - 49607516
Alignment:
Q  133 aaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacac 232  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||    
T  49607410 aaaagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacac 49607509  T
Q  233 tttctct 239  Q
    |||||||    
T  49607510 tttctct 49607516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 17470404 - 17470507
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    ||||||||||||||||||||||||||| |||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||    
T  17470404 agagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacacttt 17470503  T
Q  236 ctct 239  Q
    ||||    
T  17470504 ctct 17470507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 52629305 - 52629402
Alignment:
Q  142 atgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  52629305 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctct 52629402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 54868997 - 54868893
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    ||||||||||||||||||||||| |||| |||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||    
T  54868997 aagagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactt 54868898  T
Q  235 tctct 239  Q
    |||||    
T  54868897 tctct 54868893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 31456684 - 31456791
Alignment:
Q  132 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 231  Q
    ||||| ||||||||||||||||||||  |||  ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  31456684 aaaaaaagtaatgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcaca 31456783  T
Q  232 ctttctct 239  Q
    ||||||||    
T  31456784 ctttctct 31456791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 8076393 - 8076495
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||| ||||| |||| ||||| |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttc 8076492  T
Q  237 tct 239  Q
    |||    
T  8076493 tct 8076495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 48587187 - 48587089
Alignment:
Q  141 aatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    ||||||||||||| ||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  48587187 aatgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctct 48587089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 11095455 - 11095353
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||| || |||||||    
T  11095455 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgt--accccgcataaacacactt 11095358  T
Q  235 tctct 239  Q
    |||||    
T  11095357 tctct 11095353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 9562998 - 9563101
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    |||||||||||||||| ||||| ||||||| ||||||| ||||||||| ||| |||||||||||||||||||||||||||| || |||||| ||||||||    
T  9562998 agagtaatgatacataaacaccattagatgacaatacaacctttgacatccatataaaaatctgacacgtagtcacgtggatcctgcacaaacacacttt 9563097  T
Q  236 ctct 239  Q
    ||||    
T  9563098 ctct 9563101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 26141632 - 26141530
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| |||||||||||||| | |||| |||||||||||||||| ||||||||| ||||||||||||||| ||||| |||||||| |||||||||||||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactttc 26141533  T
Q  237 tct 239  Q
    |||    
T  26141532 tct 26141530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 33118953 - 33118849
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    |||||| |||||||||||||||| |||| || ||||||||||||||||||||||| |||||| ||||||||||||||||||| ||| || || |||||||    
T  33118953 aagagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacactt 33118854  T
Q  235 tctct 239  Q
    |||||    
T  33118853 tctct 33118849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 24700055 - 24699952
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    |||||||||||||||||||| | |||| |||||||||||| ||||||||||||||||||||||| ||||| | ||||||||||| | |||| ||||||||    
T  24700055 agagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacacttt 24699956  T
Q  236 ctct 239  Q
    ||||    
T  24699955 ctct 24699952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 14623939 - 14623837
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||| | |||| ||||||||||||| ||||||||||||||||||||||||| ||  ||| ||||||| | |||||||||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttc 14623840  T
Q  237 tct 239  Q
    |||    
T  14623839 tct 14623837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 41189866 - 41189762
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    |||||| |||||||||| ||| | |||| |||||||||| | |||||||||||||||||||| |||||||| | ||| ||||||||||||||||||||||    
T  41189866 aagagttatgatacatatacatccttaggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactt 41189767  T
Q  235 tctct 239  Q
    |||||    
T  41189766 tctct 41189762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 51419460 - 51419358
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| |||||||||||||| | ||||||| ||||||| ||||| ||||||||| ||||||||||||||| | ||| | ||||||||||||||||||||||    
T  51419460 gagttatgatacatagacatccttagatgacaatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttc 51419361  T
Q  237 tct 239  Q
    |||    
T  51419360 tct 51419358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 239
Target Start/End: Complemental strand, 13898154 - 13898053
Alignment:
Q  138 agtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttct 237  Q
    |||||||||| ||| ||| | |||| ||||||||||||| ||||||||||||||||||||||||||||  ||| ||||||| | ||||||||||||||||    
T  13898154 agtaatgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttct 13898055  T
Q  238 ct 239  Q
    ||    
T  13898054 ct 13898053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 26754700 - 26754797
Alignment:
Q  142 atgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    ||||| |||||||||| |||| ||||||||||||||| |||| ||||| |||||||||||| || ||||| ||||||||||||||||||| |||||||    
T  26754700 atgattcatagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctct 26754797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 134 - 222
Target Start/End: Complemental strand, 36707527 - 36707439
Alignment:
Q  134 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgc 222  Q
    |||||||||||||||||||| ||| |||| || ||||||||||||||||| ||||| |||||||||||||||||| ||||||| |||||    
T  36707527 aaagagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgtagttacgtggatcccgc 36707439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 35536625 - 35536728
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    |||||||||||||||||||| | |||  |||||||||||| |||||||||||||||||||| |||||||| |||| |||||||   |||||||||||||     
T  35536625 agagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacacttc 35536724  T
Q  236 ctct 239  Q
    ||||    
T  35536725 ctct 35536728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 11348026 - 11347920
Alignment:
Q  133 aaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacac 232  Q
    |||||||| |||||||||||||| | |||| || ||||||| ||||||||| ||||| ||||||||||||||| | ||| ||||||| ||| ||||||||    
T  11348026 aaaagagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcacac 11347927  T
Q  233 tttctct 239  Q
    |||||||    
T  11347926 tttctct 11347920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 8956761 - 8956864
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    |||||||||||||||||||| | |||  |||||||||| |||||||||||||||||||||| ||||||||  ||| |||||||   |||||||||||||     
T  8956761 agagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgtgttcatgtggaccttacacaagcacacttc 8956860  T
Q  236 ctct 239  Q
    ||||    
T  8956861 ctct 8956864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 20765015 - 20764913
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| |||| ||||||||| | |||| ||| ||||||| |||| ||||||||| ||||||||||||||| | ||| ||||||||| ||||||||||||||    
T  20765015 gagttatgagacatagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacactttc 20764916  T
Q  237 tct 239  Q
    |||    
T  20764915 tct 20764913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 30801829 - 30801731
Alignment:
Q  141 aatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    ||||||||||||||||| |||| ||  |||||||||||||| ||||||| |||||| ||||| |||||||  |||||||| |||||||||| |||||||    
T  30801829 aatgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcacattttctct 30801731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 47531865 - 47531967
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| |||||||||||||| | ||||||||||||||||| ||| ||| ||||| || |||||||||||| | ||  || |||||||||||||||||||||    
T  47531865 gagttatgatacatagacatccttagatggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttc 47531964  T
Q  237 tct 239  Q
    |||    
T  47531965 tct 47531967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 45058652 - 45058551
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| |||||||||| ||||| |||| ||||||||||||| ||||||||||||||||||||||||| ||   ||  ||||||||||||||| | ||||||    
T  45058652 gagttatgatacataaacacccttaggtggcaatacaccc-ttgacacccacataaaaatctgacatgtgaccatatggaccccgcacaagtatactttc 45058554  T
Q  237 tct 239  Q
    |||    
T  45058553 tct 45058551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 11907369 - 11907473
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    |||||| |||||||||||||||| |||| || |||||||| | |  |||| |||| |||||||||||| || ||||  ||||||||||||||||||| ||    
T  11907369 aagagttatgatacatagacacccttaggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacattt 11907468  T
Q  235 tctct 239  Q
    |||||    
T  11907469 tctct 11907473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 36331407 - 36331327
Alignment:
Q  159 ttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    |||| ||||||| ||||| |||||||||||| |||||||||||| || | ||  ||||||||||||||| |||||||||||    
T  36331407 ttaggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctct 36331327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 35965876 - 35965806
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgt 205  Q
    ||||||||||||||||| ||| | |||  ||  |||||| |||||||||||||||||||||||||||||||    
T  35965876 aagagtaatgatacatatacatccttaagtgataatacatcctttgacacccacataaaaatctgacacgt 35965806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 41080709 - 41080809
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||| | |||| | |||| ||||||||||||||||||  |||||||||| | || |||| ||||| ||| |||||||||| ||||    
T  41080709 gagtaatgatacatagacatccttag-tagcaaaacaccctttgacacccacgcaaaaatctgatatgtggtcatgtgga-cccacacaagcacattttc 41080806  T
Q  237 tct 239  Q
    |||    
T  41080807 tct 41080809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 239
Target Start/End: Original strand, 42823116 - 42823213
Alignment:
Q  142 atgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    |||||||||| ||||| |||  ||| ||||||||| |||||||||||| |||||| ||||| || ||||  ||||||||||| ||| | |||||||||    
T  42823116 atgatacataaacaccattatgtggtaatacaccccttgacacccacaaaaaaatttgacatgtggtcatatggaccccgcataagtatactttctct 42823213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 35093583 - 35093687
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    |||||| | |||||||||||| |||||| || ||||||| | ||||||| ||||  |||||||||||| || |||| ||| || ||  ||||||||||||    
T  35093583 aagagttacgatacatagacaactttaggtgacaatacaacatttgacatccacgcaaaaatctgacatgtggtcatgtgaactccatacaagcacactt 35093682  T
Q  235 tctct 239  Q
    |||||    
T  35093683 tctct 35093687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 36331479 - 36331416
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctg 199  Q
    ||||| |||||||||| ||||| |||||||||||| ||||| |||||| ||||| |||||||||    
T  36331479 agagttatgatacataaacacccttagatggcaatgcaccccttgacatccacacaaaaatctg 36331416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 48375807 - 48375704
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    ||||| ||||| |||||||||| |||| || |||||||||| |  | | ||| | |||||||||||  || ||||| ||||||||||||||||||| |||    
T  48375807 agagttatgattcatagacacccttaggtgacaatacacccctgaaaatccatacaaaaatctgacgtgtggtcacatggaccccgcacaagcacatttt 48375708  T
Q  236 ctct 239  Q
    ||||    
T  48375707 ctct 48375704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 239
Target Start/End: Complemental strand, 25407245 - 25407145
Alignment:
Q  140 taatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaa-tctgacacgtagtcacgtggaccccgcacaagcacactttctc 238  Q
    |||||||||||| ||| |  ||| |||||||| |||| ||||||| |||| ||||| ||||||||||  |||  |||| ||| ||||| |||||||||||    
T  25407245 taatgatacatacacaaccataggtggcaatataccccttgacacacacacaaaaaatctgacacgtgatcatatggatcccacacaaacacactttctc 25407146  T
Q  239 t 239  Q
    |    
T  25407145 t 25407145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 43745773 - 43745825
Alignment:
Q  164 tggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtgga 216  Q
    ||||||||||| |||||||| |||| ||||||| ||||||||  |||||||||    
T  43745773 tggcaatacactctttgacatccacgtaaaaatttgacacgtcatcacgtgga 43745825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 8e-42; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 12831047 - 12831149
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||||| |||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 12831146  T
Q  237 tct 239  Q
    |||    
T  12831147 tct 12831149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 15197333 - 15197435
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 15197432  T
Q  237 tct 239  Q
    |||    
T  15197433 tct 15197435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 136 - 237
Target Start/End: Original strand, 37038478 - 37038579
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  37038478 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacacttt 37038577  T
Q  236 ct 237  Q
    ||    
T  37038578 ct 37038579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 14547920 - 14548024
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    |||||||| |||||||||||||| |||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  14547920 aagagtaaagatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 14548019  T
Q  235 tctct 239  Q
    |||||    
T  14548020 tctct 14548024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 504226 - 504119
Alignment:
Q  132 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 231  Q
    |||| ||||||||||||||||||||| |||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  504226 aaaatgagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcaca 504127  T
Q  232 ctttctct 239  Q
    | ||||||    
T  504126 cattctct 504119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 23122697 - 23122595
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||||| |||  |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttc 23122598  T
Q  237 tct 239  Q
    |||    
T  23122597 tct 23122595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 34012396 - 34012294
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||||| |||| ||| |||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||    
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttc 34012297  T
Q  237 tct 239  Q
    |||    
T  34012296 tct 34012294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 40424043 - 40423941
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||| ||| |||| |||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||    
T  40424043 gagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttc 40423944  T
Q  237 tct 239  Q
    |||    
T  40423943 tct 40423941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 5957825 - 5957932
Alignment:
Q  132 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 231  Q
    ||||| ||||||||||||||||||   |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||    
T  5957825 aaaaaaagtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcaca 5957924  T
Q  232 ctttctct 239  Q
    ||||||||    
T  5957925 ctttctct 5957932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 1180040 - 1179938
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||||| |||| ||| |||||||||||||||||||||| |||||||||||||||||||| |||||  ||||||||||||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttc 1179941  T
Q  237 tct 239  Q
    |||    
T  1179940 tct 1179938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 134 - 239
Target Start/End: Complemental strand, 10284734 - 10284629
Alignment:
Q  134 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacact 233  Q
    ||||||| |||||||||||||||| |||  || |||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  10284734 aaagagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacact 10284635  T
Q  234 ttctct 239  Q
    ||||||    
T  10284634 ttctct 10284629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 44507188 - 44507085
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    |||||||||||||||||||||| |||| ||| ||||||| |||| ||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||    
T  44507188 agagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatacttt 44507089  T
Q  236 ctct 239  Q
    ||||    
T  44507088 ctct 44507085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 43414686 - 43414579
Alignment:
Q  132 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 231  Q
    |||| |||| |||||||||||||| | ||||||||||| ||||||||||||||||||| |||||||| |||||| ||||| |||| ||||||||||||||    
T  43414686 aaaatgagttatgatacatagacatccttagatggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcaca 43414587  T
Q  232 ctttctct 239  Q
    ||||||||    
T  43414586 ctttctct 43414579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 15048281 - 15048180
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| |||||||||||||| | |||| |||||||||||||||||||||| ||| ||||||||||||||||| ||| ||||||||||||||||||||||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgacacc-acacaaaaatctgacacgtagccacatggaccccgcacaagcacactttc 15048183  T
Q  237 tct 239  Q
    |||    
T  15048182 tct 15048180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 159 - 239
Target Start/End: Complemental strand, 8841510 - 8841430
Alignment:
Q  159 ttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    |||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8841510 ttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctct 8841430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 10621182 - 10621085
Alignment:
Q  142 atgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    |||||||||||||| | |||| ||| |||||||||||||||||||||| ||||||||||||||||| ||| | || ||||||||||||||||||||||    
T  10621182 atgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctct 10621085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 4854965 - 4854861
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    ||||||||||||||||||||| | |||| |||||||||||||||| ||||| |||||||||||||| | || | ||| ||||||| ||||||||||||||    
T  4854965 aagagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacactt 4854866  T
Q  235 tctct 239  Q
    |||||    
T  4854865 tctct 4854861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 16383372 - 16383479
Alignment:
Q  132 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 231  Q
    ||||||||| |||||||||| ||||| |||| ||||||||||||| |||||||||||| |||||||||||| || | ||  ||||||||||||||| |||    
T  16383372 aaaaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtaca 16383471  T
Q  232 ctttctct 239  Q
    ||||||||    
T  16383472 ctttctct 16383479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 15259031 - 15258927
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    |||||| |||||||||||| ||  ||||||||||||||| || | |||| |||||||||||||||||| || ||||||||||||| ||||||||||| ||    
T  15259031 aagagttatgatacatagatactcttagatggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacattt 15258932  T
Q  235 tctct 239  Q
    |||||    
T  15258931 tctct 15258927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 34307214 - 34307318
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    |||||| |||||||||| ||||| |||| ||||||||||||| |||||||||||| |||||||||||| || | ||  || |||||||||||| ||||||    
T  34307214 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacactt 34307313  T
Q  235 tctct 239  Q
    |||||    
T  34307314 tctct 34307318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 30479579 - 30479472
Alignment:
Q  132 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 231  Q
    |||| |||| |||||||||| ||||| |||| |||||||||||||||||||| |||||||||||||||||| || |  |  |||||| |||||||| |||    
T  30479579 aaaaggagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgacatgtggctatatggacctcgcacaagtaca 30479480  T
Q  232 ctttctct 239  Q
    ||||||||    
T  30479479 ctttctct 30479472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 20075034 - 20074940
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||| | |||| ||||||||||| ||||||||||||||||||||| |||        ||||||||||| ||||||||||||||||    
T  20075034 gagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtga--------cacgtggaccctgcacaagcacactttc 20074943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 24307895 - 24307791
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    |||||| |||||||||| ||||| |||| |||||||||| || |||||||||||| |||||||||| | || | ||  ||||||||||||||| ||||||    
T  24307895 aagagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacactt 24307796  T
Q  235 tctct 239  Q
    |||||    
T  24307795 tctct 24307791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 9122229 - 9122287
Alignment:
Q  181 acacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    ||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  9122229 acacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctct 9122287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 135 - 239
Target Start/End: Original strand, 42221513 - 42221617
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    ||||||||||||||||| ||| | |||| || |||||||  | | |||||||||| |||||||||||||||| |||  ||||||||  ||||||||||||    
T  42221513 aagagtaatgatacatatacatccttaggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactt 42221612  T
Q  235 tctct 239  Q
    |||||    
T  42221613 tctct 42221617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 16056506 - 16056399
Alignment:
Q  132 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 231  Q
    ||||||||| |||||||||| ||| | |||  || ||||||| || |||||||||||| |||||||||||| || | ||  ||||||||||||||| |||    
T  16056506 aaaaagagttatgatacataaacatccttatgtgacaatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtaca 16056407  T
Q  232 ctttctct 239  Q
    ||||||||    
T  16056406 ctttctct 16056399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 24307624 - 24307692
Alignment:
Q  132 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctga 200  Q
    ||||||||| |||||||||| ||||| |||| |||||||||| || |||||||||||| ||||||||||    
T  24307624 aaaaagagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctga 24307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 220
Target Start/End: Complemental strand, 14055692 - 14055609
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggacccc 220  Q
    |||| ||||||||| |||||| |||| || |||||||| | |||||| ||||| |||||||| ||| |||||||||||||||||    
T  14055692 gagttatgatacattgacacccttaggtgacaatacactccttgacatccacacaaaaatcttacatgtagtcacgtggacccc 14055609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 17443824 - 17443927
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    ||||| |||||||||||||| | |||| || ||||||||   || |||| |||| |||||||||||| ||||||| ||||||||| |||||  |||||||    
T  17443824 agagttatgatacatagacaaccttaggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacacttt 17443923  T
Q  236 ctct 239  Q
    ||||    
T  17443924 ctct 17443927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 32032724 - 32032826
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    ||||| |||||||||| ||||| |||| |||||||||| |||| |||| ||||| |||||||||||| || | ||  |||| || ||||||| |||||||    
T  32032724 agagttatgatacataaacacccttaggtggcaatacatcctt-gacatccacacaaaaatctgacatgtggccatatggatcctgcacaagtacacttt 32032822  T
Q  236 ctct 239  Q
    ||||    
T  32032823 ctct 32032826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 176
Target Start/End: Original strand, 9122196 - 9122234
Alignment:
Q  138 agtaatgatacatagacacctttagatggcaatacaccc 176  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  9122196 agtaatgatacatagacacccttaggtggcaatacaccc 9122234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Complemental strand, 29705527 - 29705466
Alignment:
Q  164 tggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaa 226  Q
    |||||||||||||||| ||||||||| |||| |||||||||| |  || ||||||||||||||    
T  29705527 tggcaatacacccttt-acacccacacaaaattctgacacgtggcaacttggaccccgcacaa 29705466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 20148925 - 20148885
Alignment:
Q  164 tggcaatacaccctttgacacccacataaaaatctgacacgt 205  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  20148925 tggcaatacacccttt-acacccacataaaattctgacacgt 20148885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 38229470 - 38229530
Alignment:
Q  179 tgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    ||||||||||| |||||||||||| || ||||||||||  | | ||||||||| |||||||    
T  38229470 tgacacccacacaaaaatctgacatgtggtcacgtggattctgtacaagcacattttctct 38229530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 8e-42; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 32869678 - 32869780
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||||| |||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  32869678 gagtaaagatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 32869777  T
Q  237 tct 239  Q
    |||    
T  32869778 tct 32869780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 140 - 239
Target Start/End: Complemental strand, 22880755 - 22880656
Alignment:
Q  140 taatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22880755 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctct 22880656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 17598549 - 17598656
Alignment:
Q  132 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 231  Q
    |||| ||||||||||||||||||||| |||| |||||||||| | ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  17598549 aaaatgagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcaca 17598648  T
Q  232 ctttctct 239  Q
    ||||||||    
T  17598649 ctttctct 17598656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 29857827 - 29857929
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||| ||||||| |||||| ||||||||||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 29857926  T
Q  237 tct 239  Q
    |||    
T  29857927 tct 29857929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 11427615 - 11427720
Alignment:
Q  136 agagtaatgatacatagacacctt--tagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacact 233  Q
    |||||||||||||||||||||| |  ||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  11427615 agagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacact 11427714  T
Q  234 ttctct 239  Q
    ||||||    
T  11427715 ttctct 11427720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 134 - 239
Target Start/End: Complemental strand, 6209568 - 6209463
Alignment:
Q  134 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacact 233  Q
    |||||||||||||||||||||||| |||| |||||||||||  |||||||| |||| ||||||||| |||||||||||||||||||||||| ||||||||    
T  6209568 aaagagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacact 6209469  T
Q  234 ttctct 239  Q
    ||||||    
T  6209468 ttctct 6209463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 23128231 - 23128125
Alignment:
Q  133 aaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacac 232  Q
    |||||| |||||||| |||||||||||||  ||  |||||| ||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||    
T  23128231 aaaagaataatgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacac 23128132  T
Q  233 tttctct 239  Q
    |||||||    
T  23128131 tttctct 23128125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 31109500 - 31109398
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||  ||||||||| |||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| ||| ||||||||    
T  31109500 gagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgtagaccccgcaaaagtacactttc 31109401  T
Q  237 tct 239  Q
    |||    
T  31109400 tct 31109398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 31976247 - 31976350
Alignment:
Q  136 agagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacacttt 235  Q
    ||||| |||||||||||||| | |||| |||||||| ||||||| ||||||||| ||||||||||||||| ||||| || ||||||||||||||||||||    
T  31976247 agagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacacttt 31976346  T
Q  236 ctct 239  Q
    ||||    
T  31976347 ctct 31976350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 31110863 - 31110759
Alignment:
Q  133 aaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacac 232  Q
    |||||||| |||||||||||||| | |||| ||||||||||||||||||||| |||  ||||||||||||||||  ||| ||||||| ||||||||||||    
T  31110863 aaaagagttatgatacatagacatccttaggtggcaatacaccctttgacactcac--aaaaatctgacacgtaaccacatggaccctgcacaagcacac 31110766  T
Q  233 tttctct 239  Q
    |||||||    
T  31110765 tttctct 31110759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 133 - 239
Target Start/End: Original strand, 15832573 - 15832679
Alignment:
Q  133 aaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacac 232  Q
    |||||||||||||||||||||||||||||| || ||||| | | ||||||||||||| |||||| ||||||||||||||||||| || ||||||  |||     
T  15832573 aaaagagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtggatcctgcacaaatacat 15832672  T
Q  233 tttctct 239  Q
    |||||||    
T  15832673 tttctct 15832679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 239
Target Start/End: Complemental strand, 30341463 - 30341358
Alignment:
Q  134 aaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacact 233  Q
    ||||||| |||||||||| ||||| |||| ||||||||||||| |||||||||||| |||||||||||| || | ||  ||||||||||||||| |||||    
T  30341463 aaagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacact 30341364  T
Q  234 ttctct 239  Q
    ||||||    
T  30341363 ttctct 30341358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 135 - 239
Target Start/End: Complemental strand, 15990144 - 15990040
Alignment:
Q  135 aagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactt 234  Q
    |||||| |||||||||| ||||| |||| ||||||||||||| |||||||||||| |||||||||||| || | ||  ||||||||||||||| ||||||    
T  15990144 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactt 15990045  T
Q  235 tctct 239  Q
    |||||    
T  15990044 tctct 15990040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 15508124 - 15508022
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| |||||||||| ||||| |||| ||||||||||||| |||||||||||| |||||||||||| || | ||  ||||||||||||||| ||||||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttc 15508025  T
Q  237 tct 239  Q
    |||    
T  15508024 tct 15508022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 31953130 - 31953028
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||| ||||||| | |||| ||||||||||||| ||||||||||||||||||||||||| ||  ||| ||||||| | ||||| |||||||||    
T  31953130 gagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactttc 31953031  T
Q  237 tct 239  Q
    |||    
T  31953030 tct 31953028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 141 - 239
Target Start/End: Complemental strand, 28536582 - 28536486
Alignment:
Q  141 aatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    ||||||||||| ||| | |||| |||||||||| || |||||||||||| ||||||||||||||  |||| ||||||||| ||||||||||||||||||    
T  28536582 aatgatacataaacatccttaggtggcaatacaacccttgacacccacacaaaaatctgacacg--gtcatgtggaccccacacaagcacactttctct 28536486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 4231548 - 4231650
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| ||||| |||| ||| | |||| ||||||||||||| ||| |||||||| ||||||||||||||| | ||  ||||||||||||||| ||||||||    
T  4231548 gagttatgattcataaacatcattaggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacactttc 4231647  T
Q  237 tct 239  Q
    |||    
T  4231648 tct 4231650  T

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Target: chr6; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 946371 - 946478
Alignment:
Q  132 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 231  Q
    ||||| ||||| |||||||||||| | |||| ||  |||||||||||||||||| ||  ||||||||||||| |||||||||  | ||||| | ||||||    
T  946371 aaaaaaagtaacgatacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacacctagtcacgtaaatcccgctctagcaca 946470  T
Q  232 ctttctct 239  Q
    ||||||||    
T  946471 ctttctct 946478  T

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Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 239
Target Start/End: Original strand, 12732477 - 12732584
Alignment:
Q  132 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 231  Q
    ||||||||||||||||||||||||   |||  |||||||| |  | |||||||||||| ||||||||||||||| |  | ||||| ||| || |||||||    
T  12732477 aaaaagagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgtggctatgtggatcccacataagcaca 12732576  T
Q  232 ctttctct 239  Q
     |||||||    
T  12732577 ttttctct 12732584  T

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Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 30870058 - 30870116
Alignment:
Q  181 acacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    ||||||| |||||||||| ||| || ||||| ||||||||||||||||||| |||||||    
T  30870058 acacccatataaaaatctaacatgtggtcacatggaccccgcacaagcacattttctct 30870116  T

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Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 239
Target Start/End: Complemental strand, 9379807 - 9379710
Alignment:
Q  142 atgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    |||||||||||||| | ||||||| ||||||| || |||||||||| | |||||| |||||||| | || ||||| | | ||||| |||| |||||||    
T  9379807 atgatacatagacatccttagatgacaatacatcccttgacacccatacaaaaatttgacacgtggccatgtggatctcacacaaacacattttctct 9379710  T

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Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Complemental strand, 3213565 - 3213525
Alignment:
Q  164 tggcaatacaccctttgacacccacataaaaatctgacacgt 205  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  3213565 tggcaatacacccttt-acacccacataaaattctgacacgt 3213525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 21293612 - 21293652
Alignment:
Q  164 tggcaatacaccctttgacacccacataaaaatctgacacgt 205  Q
    |||||||||||||||| |||||||||||||| ||||||||||    
T  21293612 tggcaatacacccttt-acacccacataaaattctgacacgt 21293652  T

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Target: scaffold0321 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 10214 - 10107
Alignment:
Q  132 aaaaagagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcaca 231  Q
    ||||||||| ||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||| || |||||||||    
T  10214 aaaaagagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcaca 10115  T
Q  232 ctttctct 239  Q
    ||||||||    
T  10114 ctttctct 10107  T

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Target: scaffold0237 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 4029 - 4131
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||| ||||||| |||||| ||||||||||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttc 4128  T
Q  237 tct 239  Q
    |||    
T  4129 tct 4131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 1029 - 927
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||| |||||| |||||||||||||||| ||| ||||| ||||| |||||||||||||||||| | |||||||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  237 tct 239  Q
    |||    
T  929 tct 927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 1029 - 927
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    ||||||||||||||||||| |||||| |||||||||||||||| ||| ||||| ||||| |||||||||||||||||| | |||||||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttc 930  T
Q  237 tct 239  Q
    |||    
T  929 tct 927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 239
Target Start/End: Original strand, 152525 - 152600
Alignment:
Q  164 tggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    ||||||||||||| |||||||||||| |||||||||||| || ||||  |||| |||||||||  |||||||||||    
T  152525 tggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctct 152600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 17083 - 17156
Alignment:
Q  166 gcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctct 239  Q
    |||||||| || | |||| ||||| |||||||||||| || ||||| ||||||||||||||||||| |||||||    
T  17083 gcaatacatccctcgacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctct 17156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 8963 - 8861
Alignment:
Q  137 gagtaatgatacatagacacctttagatggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttc 236  Q
    |||| |||||| ||||||| | |||  || ||||||||  ||||||| | ||| |||||| |||||| |||||||||||||||| |||||| ||| ||||    
T  8963 gagttatgatatatagacatccttaagtgacaatacactatttgacatctacacaaaaatttgacacatagtcacgtggaccccacacaagtacattttc 8864  T
Q  237 tct 239  Q
    |||    
T  8863 tct 8861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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