View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3485_low_1 (Length: 898)

Name: NF3485_low_1
Description: NF3485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3485_low_1
NF3485_low_1
[»] chr2 (48 HSPs)
chr2 (24-408)||(31658583-31658967)
chr2 (580-718)||(40533250-40533388)
chr2 (576-718)||(2317104-2317246)
chr2 (580-718)||(37725550-37725688)
chr2 (580-717)||(36947752-36947889)
chr2 (580-717)||(490004-490140)
chr2 (583-719)||(1859925-1860061)
chr2 (583-719)||(45555380-45555516)
chr2 (580-719)||(13568482-13568621)
chr2 (580-717)||(3724211-3724348)
chr2 (580-717)||(35292510-35292646)
chr2 (583-718)||(6657442-6657577)
chr2 (583-718)||(18009227-18009362)
chr2 (583-720)||(7504296-7504434)
chr2 (583-717)||(41839654-41839788)
chr2 (580-717)||(10711277-10711414)
chr2 (580-716)||(16815120-16815256)
chr2 (580-697)||(36192240-36192357)
chr2 (583-719)||(39879192-39879328)
chr2 (576-715)||(5085105-5085243)
chr2 (583-717)||(21836336-21836473)
chr2 (583-719)||(21425210-21425346)
chr2 (583-719)||(26738030-26738166)
chr2 (583-714)||(33424005-33424137)
chr2 (583-700)||(28394085-28394204)
chr2 (583-719)||(33716567-33716703)
chr2 (580-718)||(18576570-18576719)
chr2 (576-714)||(44068052-44068189)
chr2 (642-716)||(16854339-16854413)
chr2 (583-717)||(14819916-14820050)
chr2 (510-575)||(31658493-31658558)
chr2 (79-328)||(31650298-31650553)
chr2 (839-884)||(31658358-31658403)
chr2 (583-717)||(36049737-36049873)
chr2 (24-115)||(31657251-31657342)
chr2 (654-717)||(39620191-39620254)
chr2 (807-840)||(31658230-31658263)
chr2 (652-720)||(11088213-11088280)
chr2 (654-717)||(11227627-11227689)
chr2 (658-717)||(15362817-15362875)
chr2 (758-793)||(31658304-31658339)
chr2 (658-717)||(41555773-41555831)
chr2 (606-720)||(42641146-42641260)
chr2 (671-717)||(45157530-45157576)
chr2 (654-719)||(58918-58982)
chr2 (672-717)||(1580603-1580648)
chr2 (654-715)||(6884161-6884221)
chr2 (653-718)||(15176341-15176405)
[»] chr6 (26 HSPs)
chr6 (580-721)||(32519002-32519143)
chr6 (580-715)||(16989382-16989517)
chr6 (576-720)||(18870919-18871064)
chr6 (580-716)||(35225100-35225236)
chr6 (580-719)||(26810775-26810914)
chr6 (576-717)||(1338853-1338995)
chr6 (583-718)||(9226199-9226334)
chr6 (580-718)||(6016074-6016212)
chr6 (580-689)||(33954480-33954588)
chr6 (583-690)||(27719277-27719384)
chr6 (583-717)||(24025531-24025665)
chr6 (583-718)||(34315397-34315530)
chr6 (583-678)||(34969491-34969586)
chr6 (583-686)||(29639007-29639110)
chr6 (603-719)||(21181137-21181253)
chr6 (576-714)||(6974965-6975103)
chr6 (658-718)||(1705605-1705664)
chr6 (654-718)||(32834118-32834181)
chr6 (672-717)||(8549916-8549961)
chr6 (642-717)||(9661752-9661828)
chr6 (603-717)||(7344607-7344722)
chr6 (583-630)||(11273689-11273736)
chr6 (583-630)||(14715539-14715586)
chr6 (583-630)||(24151398-24151445)
chr6 (658-717)||(24248804-24248862)
chr6 (665-718)||(15383559-15383611)
[»] chr1 (74 HSPs)
chr1 (576-717)||(43224911-43225052)
chr1 (580-718)||(7426930-7427068)
chr1 (580-720)||(14190887-14191027)
chr1 (580-719)||(3150455-3150594)
chr1 (583-722)||(17376350-17376489)
chr1 (583-718)||(25493497-25493632)
chr1 (579-718)||(46872368-46872507)
chr1 (583-715)||(8569249-8569381)
chr1 (576-708)||(52273985-52274117)
chr1 (583-717)||(9223127-9223262)
chr1 (580-719)||(33829135-33829274)
chr1 (580-719)||(33838692-33838831)
chr1 (583-717)||(27801810-27801944)
chr1 (580-717)||(10061157-10061294)
chr1 (580-715)||(39852959-39853094)
chr1 (583-718)||(48480849-48480984)
chr1 (583-717)||(29171165-29171299)
chr1 (580-714)||(44647515-44647649)
chr1 (576-715)||(47860992-47861131)
chr1 (583-717)||(5057199-5057333)
chr1 (583-717)||(24248075-24248209)
chr1 (580-717)||(27038543-27038680)
chr1 (580-718)||(37765523-37765662)
chr1 (583-718)||(40850022-40850155)
chr1 (583-717)||(48868336-48868470)
chr1 (583-719)||(9260089-9260225)
chr1 (583-714)||(41321008-41321139)
chr1 (583-717)||(33234327-33234461)
chr1 (583-718)||(50502617-50502756)
chr1 (583-717)||(2684011-2684144)
chr1 (583-719)||(28095021-28095156)
chr1 (580-694)||(31571239-31571353)
chr1 (583-715)||(10635669-10635802)
chr1 (583-717)||(14131627-14131756)
chr1 (583-719)||(49739141-49739277)
chr1 (583-716)||(20280223-20280355)
chr1 (583-715)||(22821249-22821382)
chr1 (580-718)||(52079440-52079580)
chr1 (603-718)||(1658833-1658948)
chr1 (583-665)||(31016140-31016222)
chr1 (657-718)||(49685984-49686045)
chr1 (583-696)||(41550419-41550532)
chr1 (652-720)||(34256450-34256517)
chr1 (643-717)||(31075942-31076017)
chr1 (583-633)||(33771917-33771967)
chr1 (584-662)||(41757137-41757215)
chr1 (654-718)||(9166872-9166935)
chr1 (658-716)||(38207879-38207936)
chr1 (672-717)||(477796-477841)
chr1 (654-715)||(11778980-11779040)
chr1 (654-719)||(16482574-16482638)
chr1 (674-723)||(21072770-21072819)
chr1 (652-717)||(44978869-44978933)
chr1 (658-718)||(7435512-7435571)
chr1 (654-722)||(35305146-35305213)
chr1 (672-720)||(35874300-35874348)
chr1 (615-707)||(50631897-50631989)
chr1 (654-714)||(51781448-51781507)
chr1 (654-717)||(922186-922248)
chr1 (583-630)||(5957531-5957578)
chr1 (583-717)||(12227121-12227256)
chr1 (583-630)||(14077416-14077463)
chr1 (672-719)||(17554179-17554226)
chr1 (671-718)||(24230931-24230978)
chr1 (654-717)||(27295058-27295120)
chr1 (654-721)||(28493806-28493872)
chr1 (583-630)||(50534157-50534204)
chr1 (668-718)||(12178605-12178655)
chr1 (576-630)||(39084980-39085034)
chr1 (580-610)||(49289499-49289529)
chr1 (670-720)||(51056194-51056244)
chr1 (654-715)||(2247069-2247129)
chr1 (576-633)||(48313574-48313631)
chr1 (654-715)||(51184044-51184104)
[»] chr5 (52 HSPs)
chr5 (580-718)||(25684072-25684210)
chr5 (583-719)||(2148399-2148535)
chr5 (580-718)||(39540989-39541127)
chr5 (580-717)||(10453280-10453417)
chr5 (580-717)||(15725945-15726082)
chr5 (580-717)||(37314107-37314244)
chr5 (580-714)||(23189337-23189471)
chr5 (580-714)||(40340430-40340565)
chr5 (580-722)||(31236859-31237001)
chr5 (580-714)||(42534663-42534797)
chr5 (583-715)||(33001720-33001852)
chr5 (580-715)||(16729726-16729861)
chr5 (584-718)||(10688392-10688526)
chr5 (580-717)||(41631218-41631355)
chr5 (583-718)||(22798340-22798478)
chr5 (576-718)||(3881831-3881972)
chr5 (580-714)||(8068589-8068722)
chr5 (583-717)||(13589137-13589271)
chr5 (583-718)||(28770219-28770352)
chr5 (583-716)||(9530363-9530496)
chr5 (583-717)||(19125912-19126046)
chr5 (580-718)||(4094657-4094795)
chr5 (583-717)||(32624176-32624310)
chr5 (585-717)||(22279491-22279622)
chr5 (583-678)||(43411789-43411884)
chr5 (583-703)||(32063798-32063919)
chr5 (583-717)||(11758612-11758752)
chr5 (583-717)||(37963257-37963391)
chr5 (583-719)||(34859707-34859841)
chr5 (654-717)||(28332120-28332183)
chr5 (654-721)||(34302642-34302708)
chr5 (588-714)||(23408255-23408381)
chr5 (677-719)||(27353419-27353461)
chr5 (654-719)||(4618056-4618120)
chr5 (658-719)||(5204967-5205027)
chr5 (654-715)||(6560828-6560888)
chr5 (658-719)||(40756891-40756951)
chr5 (643-714)||(43393088-43393159)
chr5 (658-717)||(5141017-5141075)
chr5 (583-630)||(6335477-6335524)
chr5 (583-630)||(12336300-12336347)
chr5 (583-630)||(13593554-13593601)
chr5 (672-719)||(32993688-32993735)
chr5 (654-717)||(43237697-43237759)
chr5 (576-630)||(2011324-2011378)
chr5 (576-630)||(9499314-9499368)
chr5 (576-630)||(9499474-9499528)
chr5 (654-720)||(27116459-27116524)
chr5 (654-719)||(9589207-9589271)
chr5 (654-715)||(21605650-21605710)
chr5 (672-717)||(36339208-36339253)
chr5 (652-717)||(36409906-36409969)
[»] chr4 (51 HSPs)
chr4 (580-718)||(36569647-36569785)
chr4 (580-719)||(21514987-21515126)
chr4 (580-718)||(45629107-45629245)
chr4 (580-719)||(44998409-44998547)
chr4 (580-718)||(10779261-10779399)
chr4 (580-717)||(24291978-24292114)
chr4 (583-719)||(33612521-33612657)
chr4 (580-718)||(16004803-16004941)
chr4 (583-717)||(48549939-48550073)
chr4 (583-714)||(23639508-23639639)
chr4 (583-717)||(42244810-42244944)
chr4 (580-719)||(46222262-46222403)
chr4 (582-715)||(46633875-46634009)
chr4 (580-719)||(27967507-27967647)
chr4 (583-719)||(46630918-46631055)
chr4 (583-719)||(54499573-54499708)
chr4 (580-719)||(38955312-38955453)
chr4 (583-715)||(27635741-27635873)
chr4 (583-719)||(52257130-52257266)
chr4 (583-717)||(54505838-54505973)
chr4 (576-719)||(42680856-42680999)
chr4 (576-717)||(56016796-56016937)
chr4 (583-717)||(2526171-2526305)
chr4 (648-714)||(23645231-23645297)
chr4 (580-630)||(45754468-45754518)
chr4 (583-633)||(42080600-42080650)
chr4 (669-718)||(10972959-10973008)
chr4 (658-719)||(12756000-12756060)
chr4 (642-717)||(13548735-13548810)
chr4 (603-693)||(16601633-16601724)
chr4 (654-720)||(36091056-36091121)
chr4 (658-715)||(44957267-44957323)
chr4 (654-718)||(31681336-31681399)
chr4 (642-717)||(53936843-53936919)
chr4 (654-717)||(3716325-3716387)
chr4 (654-717)||(18425462-18425524)
chr4 (654-717)||(30342825-30342887)
chr4 (583-634)||(39412442-39412493)
chr4 (658-717)||(40438983-40439041)
chr4 (672-719)||(50607682-50607729)
chr4 (654-720)||(1414443-1414508)
chr4 (672-714)||(23059131-23059173)
chr4 (658-720)||(39103887-39103948)
chr4 (652-718)||(46216114-46216179)
chr4 (672-718)||(48647383-48647429)
chr4 (643-719)||(19842436-19842512)
chr4 (675-720)||(24535850-24535895)
chr4 (669-718)||(33491954-33492003)
chr4 (654-719)||(34280573-34280637)
chr4 (672-717)||(50383691-50383736)
chr4 (654-719)||(52324311-52324375)
[»] chr7 (43 HSPs)
chr7 (580-717)||(24505123-24505260)
chr7 (583-718)||(15090667-15090802)
chr7 (580-717)||(47219956-47220092)
chr7 (576-719)||(1282183-1282326)
chr7 (576-718)||(45197070-45197212)
chr7 (585-717)||(3061902-3062034)
chr7 (583-717)||(25866905-25867039)
chr7 (583-717)||(32186698-32186832)
chr7 (583-717)||(41715414-41715548)
chr7 (583-718)||(2038368-2038503)
chr7 (580-719)||(42039300-42039439)
chr7 (580-718)||(18922575-18922713)
chr7 (583-725)||(42902659-42902801)
chr7 (583-717)||(47069234-47069368)
chr7 (583-718)||(40947246-40947381)
chr7 (583-717)||(27130816-27130950)
chr7 (583-720)||(7574387-7574524)
chr7 (585-717)||(17334739-17334870)
chr7 (580-664)||(9923123-9923207)
chr7 (583-715)||(33704821-33704952)
chr7 (583-678)||(39444004-39444099)
chr7 (588-720)||(13806359-13806491)
chr7 (642-717)||(9682357-9682432)
chr7 (588-718)||(1343018-1343150)
chr7 (672-717)||(6791799-6791844)
chr7 (649-722)||(31743295-31743367)
chr7 (658-719)||(31759991-31760051)
chr7 (654-718)||(41913438-41913501)
chr7 (672-720)||(41968784-41968832)
chr7 (654-718)||(45857818-45857881)
chr7 (672-728)||(47369581-47369637)
chr7 (654-717)||(18990091-18990153)
chr7 (658-717)||(21920040-21920098)
chr7 (583-630)||(27427405-27427452)
chr7 (672-715)||(36533409-36533452)
chr7 (654-717)||(44964165-44964227)
chr7 (671-717)||(17340794-17340839)
chr7 (672-718)||(41771770-41771816)
chr7 (672-714)||(46291461-46291503)
chr7 (658-719)||(17833929-17833989)
chr7 (666-719)||(27800384-27800436)
chr7 (654-719)||(30624067-30624131)
chr7 (583-676)||(31311386-31311480)
[»] chr3 (59 HSPs)
chr3 (580-718)||(33830529-33830667)
chr3 (583-717)||(45927220-45927354)
chr3 (580-719)||(2667482-2667621)
chr3 (580-719)||(52782429-52782568)
chr3 (580-721)||(53186000-53186141)
chr3 (576-718)||(9322699-9322841)
chr3 (580-722)||(44500385-44500527)
chr3 (580-718)||(44962601-44962739)
chr3 (580-717)||(37567218-37567355)
chr3 (583-720)||(54008902-54009039)
chr3 (582-718)||(48925683-48925819)
chr3 (583-717)||(32719985-32720119)
chr3 (583-719)||(1326599-1326735)
chr3 (580-731)||(49951195-49951346)
chr3 (583-718)||(55365647-55365783)
chr3 (583-717)||(48389031-48389166)
chr3 (580-718)||(346689-346827)
chr3 (583-717)||(50560634-50560768)
chr3 (580-704)||(53376604-53376728)
chr3 (583-720)||(26409893-26410029)
chr3 (576-688)||(14460210-14460322)
chr3 (583-717)||(7157311-7157445)
chr3 (576-678)||(36019682-36019784)
chr3 (583-715)||(50465473-50465606)
chr3 (580-678)||(48990351-48990449)
chr3 (642-719)||(52788755-52788832)
chr3 (583-718)||(35320633-35320770)
chr3 (642-718)||(54011141-54011217)
chr3 (580-678)||(51235558-51235658)
chr3 (576-718)||(42622608-42622752)
chr3 (583-634)||(7347173-7347224)
chr3 (576-633)||(881808-881865)
chr3 (583-725)||(23043625-23043766)
chr3 (642-718)||(26885302-26885379)
chr3 (654-717)||(38785426-38785488)
chr3 (654-718)||(11140246-11140309)
chr3 (643-714)||(31479559-31479630)
chr3 (654-717)||(42364271-42364333)
chr3 (654-720)||(876566-876631)
chr3 (642-718)||(9506902-9506979)
chr3 (642-718)||(9514877-9514954)
chr3 (642-718)||(25482574-25482651)
chr3 (654-719)||(29491661-29491726)
chr3 (654-719)||(42622193-42622258)
chr3 (654-718)||(42067578-42067641)
chr3 (665-717)||(43715103-43715154)
chr3 (652-720)||(52776795-52776862)
chr3 (666-717)||(14998506-14998556)
chr3 (654-717)||(19547489-19547551)
chr3 (654-717)||(25592350-25592412)
chr3 (672-726)||(7352529-7352583)
chr3 (576-630)||(20199433-20199487)
chr3 (654-720)||(29347604-29347669)
chr3 (576-630)||(47175553-47175607)
chr3 (668-717)||(23795788-23795837)
chr3 (671-716)||(24169956-24170001)
chr3 (672-717)||(26849924-26849969)
chr3 (654-715)||(40477759-40477820)
chr3 (672-717)||(46671337-46671382)
[»] chr8 (55 HSPs)
chr8 (580-717)||(28897173-28897310)
chr8 (580-719)||(45393716-45393855)
chr8 (580-714)||(37766572-37766706)
chr8 (582-718)||(21835430-21835566)
chr8 (583-718)||(37404875-37405010)
chr8 (583-717)||(1426601-1426735)
chr8 (576-714)||(36835345-36835483)
chr8 (583-715)||(464250-464383)
chr8 (583-715)||(12266349-12266481)
chr8 (580-719)||(45401146-45401285)
chr8 (583-717)||(196338-196471)
chr8 (583-717)||(311175-311308)
chr8 (583-717)||(29039885-29040019)
chr8 (580-727)||(38971453-38971601)
chr8 (580-727)||(39002551-39002699)
chr8 (580-689)||(7223511-7223620)
chr8 (576-717)||(38803434-38803575)
chr8 (583-721)||(27101084-27101223)
chr8 (580-695)||(43182995-43183109)
chr8 (580-678)||(38627026-38627124)
chr8 (583-717)||(3052799-3052933)
chr8 (648-717)||(29565687-29565756)
chr8 (583-715)||(41571982-41572113)
chr8 (651-722)||(14914154-14914225)
chr8 (583-694)||(18844432-18844543)
chr8 (580-621)||(14914114-14914155)
chr8 (672-720)||(26988749-26988797)
chr8 (652-718)||(19718693-19718758)
chr8 (654-715)||(1043060-1043121)
chr8 (666-718)||(12801106-12801157)
chr8 (654-718)||(15726234-15726297)
chr8 (654-718)||(29454553-29454617)
chr8 (654-718)||(29773444-29773507)
chr8 (654-717)||(2273010-2273072)
chr8 (583-634)||(5982459-5982510)
chr8 (654-717)||(28090192-28090254)
chr8 (583-630)||(34058103-34058150)
chr8 (672-727)||(37676299-37676354)
chr8 (652-719)||(40154487-40154552)
chr8 (583-630)||(43331830-43331877)
chr8 (583-630)||(44309652-44309699)
chr8 (654-720)||(16323556-16323621)
chr8 (652-718)||(17096624-17096688)
chr8 (672-718)||(26522328-26522374)
chr8 (655-717)||(34047762-34047823)
chr8 (576-630)||(41674570-41674624)
chr8 (655-717)||(43049537-43049598)
chr8 (652-717)||(2261029-2261094)
chr8 (652-717)||(5215663-5215727)
chr8 (654-719)||(6631249-6631314)
chr8 (654-719)||(6800116-6800180)
chr8 (654-719)||(17642072-17642136)
chr8 (654-719)||(23286563-23286627)
chr8 (652-717)||(32071586-32071650)
chr8 (654-719)||(37511086-37511150)
[»] scaffold0022 (1 HSPs)
scaffold0022 (580-720)||(166687-166827)
[»] scaffold0121 (1 HSPs)
scaffold0121 (583-718)||(13602-13737)
[»] scaffold1999 (1 HSPs)
scaffold1999 (580-717)||(1003-1140)
[»] scaffold0239 (1 HSPs)
scaffold0239 (585-717)||(15380-15512)
[»] scaffold0493 (1 HSPs)
scaffold0493 (580-719)||(1379-1519)
[»] scaffold0005 (1 HSPs)
scaffold0005 (580-717)||(291623-291760)
[»] scaffold0194 (1 HSPs)
scaffold0194 (580-717)||(17764-17900)
[»] scaffold0349 (1 HSPs)
scaffold0349 (583-690)||(8699-8806)
[»] scaffold0017 (1 HSPs)
scaffold0017 (642-715)||(26974-27047)
[»] scaffold0301 (1 HSPs)
scaffold0301 (612-718)||(21459-21563)
[»] scaffold0184 (1 HSPs)
scaffold0184 (672-717)||(16944-16989)
[»] scaffold0078 (1 HSPs)
scaffold0078 (672-717)||(55855-55900)
[»] scaffold0625 (1 HSPs)
scaffold0625 (654-717)||(6607-6669)
[»] scaffold1844 (1 HSPs)
scaffold1844 (658-719)||(1114-1174)
[»] scaffold0432 (1 HSPs)
scaffold0432 (654-723)||(3373-3442)


Alignment Details
Target: chr2 (Bit Score: 361; Significance: 0; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 361; E-Value: 0
Query Start/End: Original strand, 24 - 408
Target Start/End: Complemental strand, 31658967 - 31658583
Alignment:
Q  24 cttgcaaaagttatttgcattcagatataaatttggaatccattgtgtcatcaaatgactcttctatattactcagttttgataacaacattccaattaa 123  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  31658967 cttgcaaaagttatttgcattcagatataaatttggaatccattttgtcatcaaatgactcttctatattacttagttttgataacaacattccaattaa 31658868  T
Q  124 agaagaaaactcgtttccaccatcaccattgccatttcttgcatctacaatagaggatcctaaggaagagattcatgatgattattcttctcaaaatcaa 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31658867 agaagaaaactcgtttccaccatcaccattgccatttcttgcatctacaaaagaggatcctaaggaagagattcatgatgattattcttctcaaaatcaa 31658768  T
Q  224 ttgttctcatcagataacctcatatcatgtaactttgaattttgttttgattatttgagacatgccactatgctatcatcgattgaatcatttgaatttg 323  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  31658767 ttgttctcatcagataacctcatatcatgtaactttgaagtttattttgattatttgagacgtgccactatgctatcatcgattgaatcatttgaatttg 31658668  T
Q  324 agaatgtttatgaccagttaggattttgatggctatggatatgtttctgtctaagtgtaaatttattttcaaagtttggcattgg 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31658667 agaatgtttatgaccagttaggattttgatggctatggatatgtttctgtctaagtgtaaatttattttcaaagtttggcattgg 31658583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 580 - 718
Target Start/End: Complemental strand, 40533388 - 40533250
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||    
T  40533388 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccg 40533289  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  40533288 atacacccaaatttattgggtgtaccatagaatttgcct 40533250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 576 - 718
Target Start/End: Original strand, 2317104 - 2317246
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 675  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||||| |||||||    
T  2317104 ttgatatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttatgacttggtgt 2317203  T
Q  676 accgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||||||||||||||||| ||||||||| ||| |||||    
T  2317204 accgatacacccaaatttattggatgtaccataaaatatgcct 2317246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 580 - 718
Target Start/End: Complemental strand, 37725688 - 37725550
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  37725688 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 37725589  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  37725588 atacacccaaatttattgggtgtaccatagaatttgcct 37725550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 580 - 717
Target Start/End: Original strand, 36947752 - 36947889
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||| |    
T  36947752 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtacag 36947851  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  36947852 atacacccaaatttattgggtgtaccatagaatttgcc 36947889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 580 - 717
Target Start/End: Original strand, 490004 - 490140
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || |||||||||||    
T  490004 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaa-caactaatttattattaattttacgacttggtgtaccg 490102  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  490103 atacacccaaatttattgggtgtaccatagaatttgcc 490140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 583 - 719
Target Start/End: Complemental strand, 1860061 - 1859925
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  1860061 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 1859962  T
Q  683 cacccaaatttattgggtgtaccatataatttgcctt 719  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  1859961 cacccaaattcattgggtgtaccatagaatttgcctt 1859925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 583 - 719
Target Start/End: Complemental strand, 45555516 - 45555380
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| || ||||||||||||||    
T  45555516 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaactcatttattattaattttacgacttggtgtaccgata 45555417  T
Q  683 cacccaaatttattgggtgtaccatataatttgcctt 719  Q
    || ||||||||||||||||||||||| ||||||||||    
T  45555416 catccaaatttattgggtgtaccatagaatttgcctt 45555380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 580 - 719
Target Start/End: Original strand, 13568482 - 13568621
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||| | ||| |||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||    
T  13568482 tatataaaatttaattatcttagtttttaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccg 13568581  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||| ||||||||||||| ||||||||| ||||||||||    
T  13568582 atacatccaaatttattggatgtaccataaaatttgcctt 13568621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 580 - 717
Target Start/End: Original strand, 3724211 - 3724348
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||  | ||||| |||||    
T  3724211 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacaacttggtataccg 3724310  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  3724311 atacacccaaatttattaggtgtaccatagaatttgcc 3724348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 580 - 717
Target Start/End: Complemental strand, 35292646 - 35292510
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  35292646 tatataaaatttaattatcttagttgtcaatgatagaaa-taattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 35292548  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  35292547 atacatccaaatttattgggtgtaccatagaatttgcc 35292510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 583 - 718
Target Start/End: Complemental strand, 6657577 - 6657442
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  6657577 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 6657478  T
Q  683 cacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||||||| |||| |||||||||| |||||||||    
T  6657477 cacccaaattcattgagtgtaccatagaatttgcct 6657442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 583 - 718
Target Start/End: Original strand, 18009227 - 18009362
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| |||||||||||||||||    
T  18009227 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccgata 18009326  T
Q  683 cacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||| ||||||||||| |||| |||| || ||||||    
T  18009327 cacctaaatttattggatgtatcatagaacttgcct 18009362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 583 - 720
Target Start/End: Original strand, 7504296 - 7504434
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtaccgat 681  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        ||||| ||||||||||||||||| || |||||||||||||    
T  7504296 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaacaactgatttattattaattttacgacttggtgtaccgat 7504395  T
Q  682 acacccaaatttattgggtgtaccatataatttgccttt 720  Q
    ||||||||||| ||||||||||||||| |||||||||||    
T  7504396 acacccaaattcattgggtgtaccatagaatttgccttt 7504434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 583 - 717
Target Start/End: Complemental strand, 41839788 - 41839654
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  41839788 ataaaatttaattatcttaattgtcaatgatagaaaataattatttttcttcaagaaaacaactgatttattattaattttacgacttggtgtaccgata 41839689  T
Q  683 cacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||||||||| ||||||||| ||||||||    
T  41839688 cacccaaatttattggatgtaccataaaatttgcc 41839654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 580 - 717
Target Start/End: Complemental strand, 10711414 - 10711277
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    |||| |||||||||||||||||||||||||| ||| |||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  10711414 tatagaaaatttaattatcttagttgtcaatgataaaaaataattatttttcttcaaaacaacaactcatttattattaattttacgacttggtgtaccg 10711315  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||| ||||||||||||| ||||||||||| ||||||||    
T  10711314 atagacccaaatttattaggtgtaccatagaatttgcc 10711277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 580 - 716
Target Start/End: Original strand, 16815120 - 16815256
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtacc 678  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||        ||||| ||||||||||||||||| |||||||||||||    
T  16815120 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaacaact-atttattattaattttacgatttggtgtacc 16815218  T
Q  679 gatacacccaaatttattgggtgtaccatataatttgc 716  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  16815219 gatacacccaaatttattaggtgtaccataaaatttgc 16815256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 580 - 697
Target Start/End: Original strand, 36192240 - 36192357
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  36192240 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 36192339  T
Q  680 atacacccaaatttattg 697  Q
    ||||||||||||||||||    
T  36192340 atacacccaaatttattg 36192357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 583 - 719
Target Start/End: Original strand, 39879192 - 39879328
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||        ||||| |||||||||||||||||||| ||||||||||||||    
T  39879192 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttctttaaaaaaacaactaatttattattaattttatgacttggtgtaccgata 39879291  T
Q  683 cacccaaatttattgggtgtaccatataatttgcctt 719  Q
    |||||||||| ||| | ||||||||| ||||||||||    
T  39879292 cacccaaattcattagatgtaccatagaatttgcctt 39879328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 576 - 715
Target Start/End: Original strand, 5085105 - 5085243
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 675  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| || |||||||    
T  5085105 ttgatatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcagaaaat-aactcatttattattaattttacgacttggtgt 5085203  T
Q  676 accgatacacccaaatttattgggtgtaccatataatttg 715  Q
    || |||||||| ||||||||||||||||| ||| ||||||    
T  5085204 actgatacacctaaatttattgggtgtactatagaatttg 5085243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 583 - 717
Target Start/End: Complemental strand, 21836473 - 21836336
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaata---attatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    |||||||||||||||||||||||||||| ||||||||||   |||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  21836473 ataaaatttaattatcttagttgtcaatgatagaaaatagtaattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 21836374  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  21836373 atacacccgaatttattgggtgtaccatagaatttgcc 21836336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 583 - 719
Target Start/End: Complemental strand, 21425346 - 21425210
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||  ||||||||||| ||||||||||||||||||||||        ||||| ||||||||||||||| | || ||||||||||||||    
T  21425346 ataaaatttaattattatagttgtcaatgatagaaaataattatttttcttataaaaaacaactaatttattattaatttaacgaattggtgtaccgata 21425247  T
Q  683 cacccaaatttattgggtgtaccatataatttgcctt 719  Q
    |||||||||||||||||||||||||| ||||||||||    
T  21425246 cacccaaatttattgggtgtaccatagaatttgcctt 21425210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 583 - 719
Target Start/End: Complemental strand, 26738166 - 26738030
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||| ||||||||||    
T  26738166 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttgatgtaccgata 26738067  T
Q  683 cacccaaatttattgggtgtaccatataatttgcctt 719  Q
    || ||||||| ||||||| ||||||| ||||||||||    
T  26738066 catccaaattcattgggtataccatagaatttgcctt 26738030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 583 - 714
Target Start/End: Original strand, 33424005 - 33424137
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtaccgat 681  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        ||||||||||||||||||||||| || |||| ||||||||    
T  33424005 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaattttacgacttggcgtaccgat 33424104  T
Q  682 acacccaaatttattgggtgtaccatataattt 714  Q
    ||||||||||||||||| ||||||||| |||||    
T  33424105 acacccaaatttattggatgtaccatagaattt 33424137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 583 - 700
Target Start/End: Complemental strand, 28394204 - 28394085
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaa--ctcatttattattaattttatgatttggtgtaccga 680  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||        ||  |||||||||||||||||||| || ||||||||||||    
T  28394204 ataaaatttaattattttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaaaactcatttattattaattttacgacttggtgtaccga 28394105  T
Q  681 tacacccaaatttattgggt 700  Q
    ||||||||||||||||||||    
T  28394104 tacacccaaatttattgggt 28394085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 583 - 719
Target Start/End: Original strand, 33716567 - 33716703
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||||||       ||||| ||||||||||| ||| |  | ||||||||||||||    
T  33716567 ataaaatttaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactaatttattattagtttaacaaattggtgtaccgata 33716666  T
Q  683 cacccaaatttattgggtgtaccatataatttgcctt 719  Q
    |||||||||||||||| |||||| || ||||||||||    
T  33716667 cacccaaatttattggatgtaccgtagaatttgcctt 33716703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 580 - 718
Target Start/End: Original strand, 18576570 - 18576719
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttc-----------ttcnnnnnnncaactcatttattattaattttatgat 668  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||           |||       ||||||||||||||||||||||| ||     
T  18576570 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcaattatttttcttcaaaaaaacaactcatttattattaattttacgac 18576669  T
Q  669 ttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||||||| ||||||||||||||||||| ||||||||| |||||||||    
T  18576670 ttggtgtaccaatacacccaaatttattggatgtaccataaaatttgcct 18576719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 576 - 714
Target Start/End: Complemental strand, 44068189 - 44068052
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 675  Q
    |||||| |||||||||||||||  ||||||||||| |||||||||||| ||||||||||       ||||| ||||||||||||||| |||| ||||| |    
T  44068189 ttgataaataaaatttaattattatagttgtcaatgatagaaaataataatttttcttcaaaaaa-caactaatttattattaatttaatgaattggtat 44068091  T
Q  676 accgatacacccaaatttattgggtgtaccatataattt 714  Q
    ||||||||||||||||||||||| | ||||||| |||||    
T  44068090 accgatacacccaaatttattggatataccataaaattt 44068052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 642 - 716
Target Start/End: Original strand, 16854339 - 16854413
Alignment:
Q  642 caactcatttattattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgc 716  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  16854339 caactcatttattattaattttacgatttggtgtaccgatacacccaaatttattaggtgtaccataaaatttgc 16854413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 583 - 717
Target Start/End: Complemental strand, 14820050 - 14819916
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||  ||||||||||| ||| |||||||||||||||||||       ||||||||||||||||||||| | ||  |||| ||| ||||    
T  14820050 ataaaatttaattattatagttgtcaatgataaaaaataattatttttcttcaaaaaaacaactcatttattattaatttaacgacatggtatactgata 14819951  T
Q  683 cacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||||||  ||||||||||| ||||||||    
T  14819950 cacccaaatttatcaggtgtaccatagaatttgcc 14819916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 510 - 575
Target Start/End: Complemental strand, 31658558 - 31658493
Alignment:
Q  510 taatgggagatttatttgatcgtttaacttatgatgtcttgctcagttggttgataaattgataaa 575  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31658558 taatgggagatttatttgatcgtttaacttatgatgtcttgctcagttagttgataaattgataaa 31658493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 79 - 328
Target Start/End: Original strand, 31650298 - 31650553
Alignment:
Q  79 tgactcttctatattactcagttttgataa---caacattccaattaaagaagaaaactcgtttccaccatcacc---attgccatttcttgcatctaca 172  Q
    ||||||||| |||||||| ||||| |||||   ||||||| ||| |||| ||||| |  | |||| |||||||||   ||||||| ||||||||||||||    
T  31650298 tgactcttcaatattacttagtttcgataataacaacatttcaaataaacaagaatatccatttcgaccatcaccaccattgccacttcttgcatctaca 31650397  T
Q  173 atagaggatcctaaggaagagattcatgatgattattcttctcaaaatcaattgttctcatcagataacctcatatcatgtaactttgaattttgttttg 272  Q
    | ||  ||||| ||||||||||| ||| ||||| ||| | ||||||| |||||||||||| | || || |||  || |||  | |||||  ||| |||||    
T  31650398 aaaggagatcccaaggaagagatacatcatgatcattttcctcaaaaccaattgttctcaccggagaatctccaattatgcgattttgatgtttattttg 31650497  T
Q  273 attatttgagacatgccactatgctatcatcgattgaatcatttgaatttgagaat 328  Q
    ||||||||||||||| || |  |  |||||||| |||||| ||| |||||||||||    
T  31650498 attatttgagacatgtcagtgagtcatcatcgagtgaatctttttaatttgagaat 31650553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 839 - 884
Target Start/End: Complemental strand, 31658403 - 31658358
Alignment:
Q  839 tgattattttgatgaatgaaacttcttgattttcttagtagtattt 884  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  31658403 tgattattttgatgaatgaaacttcttgattttcttagtagtattt 31658358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 583 - 717
Target Start/End: Original strand, 36049737 - 36049873
Alignment:
Q  583 ataaaatttaattatcttagttgtc-aatcatagaaaataatta-tttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccga 680  Q
    ||||||||||||||||||||||||| ||| |||||||||||||| ||||| ||         || |||||||||| |||| ||| || ||||||||||||    
T  36049737 ataaaatttaattatcttagttgtcaaatgatagaaaataattatttttttttaaaaaaaataattcatttattactaatattacgacttggtgtaccga 36049836  T
Q  681 tacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||| ||||||| ||| | || |||| ||||||||    
T  36049837 tacacctaaatttagtggatatatcatagaatttgcc 36049873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 31657251 - 31657342
Alignment:
Q  24 cttgcaaaagttatttgcattcagatataaatttggaatccattgtgtcatcaaatgactcttctatattactcagttttgataacaacatt 115  Q
    |||||||||| | ||  |||||||| ||||| |||||||||||| |||  |   ||||||||||||||||||| ||||| ||||||||||||    
T  31657251 cttgcaaaagctcttaccattcagacataaaattggaatccattttgtgctacgatgactcttctatattacttagtttcgataacaacatt 31657342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 654 - 717
Target Start/End: Complemental strand, 39620254 - 39620191
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||| | || | ||||||||||||||| ||||| |||||||||||||||| ||||||||    
T  39620254 tattaatttaaagagtgggtgtaccgatacactcaaatatattgggtgtaccataaaatttgcc 39620191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 807 - 840
Target Start/End: Complemental strand, 31658263 - 31658230
Alignment:
Q  807 tcaaagtaagtcattattggacaaatattgtgtg 840  Q
    ||||||||||||||||||||||||||||||||||    
T  31658263 tcaaagtaagtcattattggacaaatattgtgtg 31658230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 652 - 720
Target Start/End: Complemental strand, 11088280 - 11088213
Alignment:
Q  652 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 720  Q
    ||||||||||| |  ||||||||||||| ||||| ||||| | |||||||||||||| |||||||||||    
T  11088280 attattaatttaacaatttggtgtaccggtacactcaaatat-ttgggtgtaccatagaatttgccttt 11088213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 717
Target Start/End: Complemental strand, 11227689 - 11227627
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||| | ||||||||||||| |||||| |||| ||||||| ||||||||| ||||||||    
T  11227689 tattaatttaaggatttggtgtaccaatacactcaaa-ttattggatgtaccatagaatttgcc 11227627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 658 - 717
Target Start/End: Original strand, 15362817 - 15362875
Alignment:
Q  658 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||| |||||||||||||||| ||||| ||||||| ||| |||||||||| ||||||||    
T  15362817 aatttgatgatttggtgtaccggtacactcaaattt-ttgagtgtaccatagaatttgcc 15362875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 758 - 793
Target Start/End: Complemental strand, 31658339 - 31658304
Alignment:
Q  758 ctaattcttgtaattgcttttcgaatttttgtgtaa 793  Q
    ||||||||||||||||||||| ||||||||||||||    
T  31658339 ctaattcttgtaattgctttttgaatttttgtgtaa 31658304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 658 - 717
Target Start/End: Original strand, 41555773 - 41555831
Alignment:
Q  658 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||| ||||||||||||||||||||||  |||||| ||| |||||||||| ||||||||    
T  41555773 aatttgatgatttggtgtaccgatacacttaaattt-ttgagtgtaccatagaatttgcc 41555831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 606 - 720
Target Start/End: Original strand, 42641146 - 42641260
Alignment:
Q  606 tcaatcatagaaaataattatttttcttcnnnnnnncaactcattta-ttattaattttatgatttggtgtaccgatacacccaaatttattgggtgtac 704  Q
    ||||| ||||||||| ||| |||||||||       ||||| ||||| |||||||||| | | ||||||| |||| ||||| |||| || ||||||||||    
T  42641146 tcaatgatagaaaatgattttttttcttcaaaaaaacaactaatttaattattaatttaaaggtttggtgcaccggtacactcaaaatt-ttgggtgtac 42641244  T
Q  705 catataatttgccttt 720  Q
    |||| |||||||||||    
T  42641245 catagaatttgccttt 42641260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 671 - 717
Target Start/End: Complemental strand, 45157576 - 45157530
Alignment:
Q  671 ggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  45157576 ggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 45157530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 719
Target Start/End: Complemental strand, 58982 - 58918
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||||| | |||||| |||||| |||||| |||||| ||||||||||||||| | ||||||||    
T  58982 tattaatttaaggatttgatgtaccaatacactcaaatt-attgggtgtaccatagattttgcctt 58918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 672 - 717
Target Start/End: Original strand, 1580603 - 1580648
Alignment:
Q  672 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  1580603 gtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 1580648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 715
Target Start/End: Complemental strand, 6884221 - 6884161
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 715  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||||||||||||| ||||||    
T  6884221 tattaatttaaggatttggtgtaccaatacactcaaa-ttgttgggtgtaccatagaatttg 6884161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 653 - 718
Target Start/End: Complemental strand, 15176405 - 15176341
Alignment:
Q  653 ttattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||||||| ||| ||||||| |||| ||||| |||| | ||||||||||||||| |||||||||    
T  15176405 ttattaatttaatgctttggtgcaccggtacactcaaaat-attgggtgtaccatagaatttgcct 15176341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 2e-54; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 580 - 721
Target Start/End: Original strand, 32519002 - 32519143
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  32519002 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 32519101  T
Q  680 atacacccaaatttattgggtgtaccatataatttgccttta 721  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  32519102 atacacccaaatttattgggtgtaccatataatttgccttta 32519143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 580 - 715
Target Start/End: Original strand, 16989382 - 16989517
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| |||||||||||||||||||| |||||||||||    
T  16989382 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaacttatttattattaattttatgacttggtgtaccg 16989481  T
Q  680 atacacccaaatttattgggtgtaccatataatttg 715  Q
    ||||||||||||||||||||||||||||| ||||||    
T  16989482 atacacccaaatttattgggtgtaccataaaatttg 16989517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 576 - 720
Target Start/End: Complemental strand, 18871064 - 18870919
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtg 674  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||        |||||||||||||||||||||||||| ||||||    
T  18871064 ttgatatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcatcaaaaaaaacaactcatttattattaattttatgacttggtg 18870965  T
Q  675 taccgatacacccaaatttattgggtgtaccatataatttgccttt 720  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||    
T  18870964 taccgatacacccaaatttattggatgtaccatagaatttgccttt 18870919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 580 - 716
Target Start/End: Original strand, 35225100 - 35225236
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  35225100 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 35225199  T
Q  680 atacacccaaatttattgggtgtaccatataatttgc 716  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  35225200 atacacccaaatttattggatgtaccatagaatttgc 35225236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 580 - 719
Target Start/End: Complemental strand, 26810914 - 26810775
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||    
T  26810914 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccg 26810815  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||| ||||||||| ||||||||||| ||||| ||||    
T  26810814 atacacctaaatttattaggtgtaccatagaatttacctt 26810775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 576 - 717
Target Start/End: Complemental strand, 1338995 - 1338853
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtg 674  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||        |||||||||||||||||||||||||| ||||||    
T  1338995 ttgatatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcatcaaaaaaaacaactcatttattattaattttatgacttggtg 1338896  T
Q  675 taccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||||||||||||||||| ||||||||| ||||||||    
T  1338895 taccgatacacccaaatttattggatgtaccatagaatttgcc 1338853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 583 - 718
Target Start/End: Complemental strand, 9226334 - 9226199
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  9226334 ataaaatttaattatcttagttgtcaatgatagaaaaaaattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 9226235  T
Q  683 cacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||||||| ||||||||||||||| |||||||||    
T  9226234 cacccaaattcattgggtgtaccatagaatttgcct 9226199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 580 - 718
Target Start/End: Original strand, 6016074 - 6016212
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||       || || ||||||||||||||||| || |||||||||||    
T  6016074 tatataaaatttaattattttagttgtcaatgatagaaaataattatttttcttcaaaaaaacagcttatttattattaattttacgacttggtgtaccg 6016173  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||  |||||||||||||||||||||| |||||||||    
T  6016174 atacattcaaatttattgggtgtaccatagaatttgcct 6016212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 580 - 689
Target Start/End: Complemental strand, 33954588 - 33954480
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  33954588 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttc-aaaaaacaactcatttattattaattttacgacttggtgtaccg 33954490  T
Q  680 atacacccaa 689  Q
    ||||||||||    
T  33954489 atacacccaa 33954480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 583 - 690
Target Start/End: Original strand, 27719277 - 27719384
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  27719277 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 27719376  T
Q  683 cacccaaa 690  Q
    ||| ||||    
T  27719377 cactcaaa 27719384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 583 - 717
Target Start/End: Complemental strand, 24025665 - 24025531
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaa-taattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgat 681  Q
    |||||||||||||||||||||||||||| |||||||| | |||||||||||||       ||||| | |||||||||||||||  | |||||||||||||    
T  24025665 ataaaatttaattatcttagttgtcaatgatagaaaatttattatttttcttcaaaaaaacaactgaattattattaattttacaacttggtgtaccgat 24025566  T
Q  682 acacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||||| ||| ||||||||||| ||||||||    
T  24025565 acacccaaattcatt-ggtgtaccatagaatttgcc 24025531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 583 - 718
Target Start/End: Original strand, 34315397 - 34315530
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||        |||||  |||||||||||||||| || ||||| ||||||||    
T  34315397 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttctt-aaaaaaacaact-gtttattattaattttacgacttggtataccgata 34315494  T
Q  683 cacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||| ||||| ||||| ||||||||| |||||||||    
T  34315495 cacctaaattcattggatgtaccatagaatttgcct 34315530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 583 - 678
Target Start/End: Complemental strand, 34969586 - 34969491
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtacc 678  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| |||||||||||||    
T  34969586 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaactcatttattattaattttacgatttggtgtacc 34969491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 583 - 686
Target Start/End: Original strand, 29639007 - 29639110
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttgg-tgtaccgat 681  Q
    |||||||||||||||||||||||||||| ||||||||| ||||| |||||||       |||||||||||||||||||||||||| |||| |||||||||    
T  29639007 ataaaatttaattatcttagttgtcaatgatagaaaatgattatgtttcttc-aaaaaacaactcatttattattaattttatgacttggatgtaccgat 29639105  T
Q  682 acacc 686  Q
    |||||    
T  29639106 acacc 29639110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 603 - 719
Target Start/End: Complemental strand, 21181253 - 21181137
Alignment:
Q  603 ttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcattt-attattaattttatgatttggtgtaccgatacacccaaatttattgggtg 701  Q
    |||||||| |||||||| ||||||||||||||       |||||  ||| | ||| ||||| |||||||||||||||||||||| ||||||| ||| |||    
T  21181253 ttgtcaatgatagaaaacaattatttttcttcgaaaaaacaacttgtttcaatataaatttgatgatttggtgtaccgatacactcaaattt-ttgagtg 21181155  T
Q  702 taccatataatttgcctt 719  Q
    ||||||| ||||||||||    
T  21181154 taccatagaatttgcctt 21181137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 576 - 714
Target Start/End: Original strand, 6974965 - 6975103
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcattt-attattaattttatgatttggtg 674  Q
    |||||| |||||||||||||||  || || | ||| ||||||||||||||||| |||||       |||||||||| ||||||||||| |  |||||||     
T  6974965 ttgataaataaaatttaattattataattataaatgatagaaaataattatttatcttcaaaaaaacaactcatttaattattaatttaacaatttggta 6975064  T
Q  675 taccgatacacccaaatttattgggtgtaccatataattt 714  Q
    |||||  |||| ||||||| |||||||||||||| |||||    
T  6975065 taccggcacactcaaattt-ttgggtgtaccatagaattt 6975103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 658 - 718
Target Start/End: Complemental strand, 1705664 - 1705605
Alignment:
Q  658 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||| |||||||||||||||||||||| ||||||| ||| |||||||||| |||||||||    
T  1705664 aatttgatgatttggtgtaccgatacactcaaattt-ttgagtgtaccatagaatttgcct 1705605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 654 - 718
Target Start/End: Original strand, 32834118 - 32834181
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||| ||||||||||||||| |||||| |||| ||||| ||||||||||| |||||||||    
T  32834118 tattaatttaatgatttggtgtaccaatacactcaaa-ttattaggtgtaccatagaatttgcct 32834181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 672 - 717
Target Start/End: Original strand, 8549916 - 8549961
Alignment:
Q  672 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||    
T  8549916 gtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 8549961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 642 - 717
Target Start/End: Complemental strand, 9661828 - 9661752
Alignment:
Q  642 caactcatttat-tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||||  ||||||||| | || | ||||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  9661828 caactcatttaactattaatttaaagaatgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 9661752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 603 - 717
Target Start/End: Original strand, 7344607 - 7344722
Alignment:
Q  603 ttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcattta-ttattaattttatgatttggtgtaccgatacacccaaatttattgggt 700  Q
    |||||||| |||||||| ||||||||||||||        |||||| |||| ||||| |||| || ||||||||||||| ||||| |||| || ||||||    
T  7344607 ttgtcaatgatagaaaacaattatttttcttcaaaaaaaacaactcgtttaattatttatttaataatttggtgtaccggtacactcaaa-ttgttgggt 7344705  T
Q  701 gtaccatataatttgcc 717  Q
    |||||||| ||||||||    
T  7344706 gtaccatagaatttgcc 7344722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 630
Target Start/End: Original strand, 11273689 - 11273736
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 630  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  11273689 ataagatttaattattatagttgtcaatgatagaaaataattattttt 11273736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 630
Target Start/End: Original strand, 14715539 - 14715586
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 630  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  14715539 ataagatttaattattatagttgtcaatgatagaaaataattattttt 14715586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 630
Target Start/End: Original strand, 24151398 - 24151445
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 630  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  24151398 ataagatttaattattatagttgtcaatgatagaaaataattattttt 24151445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 658 - 717
Target Start/End: Complemental strand, 24248862 - 24248804
Alignment:
Q  658 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||| |||||||||||||||| ||||| ||||||| ||| |||||||||| ||||||||    
T  24248862 aatttgatgatttggtgtaccggtacactcaaattt-ttgagtgtaccatagaatttgcc 24248804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 665 - 718
Target Start/End: Original strand, 15383559 - 15383611
Alignment:
Q  665 tgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||| |||| |||||| ||||||| |||| |||||||||||||||||||    
T  15383559 tgatttggtataccaatacactcaaattt-ttggatgtaccatataatttgcct 15383611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 2e-54; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 576 - 717
Target Start/End: Original strand, 43224911 - 43225052
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 675  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||||| |||||||    
T  43224911 ttgatatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttatgacttggtgt 43225010  T
Q  676 accgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  43225011 accgatacacccaaatttattgggtgtaccatagaatttgcc 43225052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 580 - 718
Target Start/End: Original strand, 7426930 - 7427068
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||    
T  7426930 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccg 7427029  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  7427030 atacacccaaatttattgggtgtaccatagaatttgcct 7427068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 580 - 720
Target Start/End: Complemental strand, 14191027 - 14190887
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  14191027 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 14190928  T
Q  680 atacacccaaatttattgggtgtaccatataatttgccttt 720  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  14190927 atacacccaaatttattgggtgtaccataaaatttgccttt 14190887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 580 - 719
Target Start/End: Original strand, 3150455 - 3150594
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  3150455 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 3150554  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||||||||||||||| ||||||||| ||||| ||||    
T  3150555 atacacccaaatttattggatgtaccatagaatttacctt 3150594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 583 - 722
Target Start/End: Complemental strand, 17376489 - 17376350
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  17376489 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgata 17376390  T
Q  683 cacccaaatttattgggtgtaccatataatttgcctttaa 722  Q
    |||||||||||||||| ||||||||| |||||| ||||||    
T  17376389 cacccaaatttattggatgtaccatagaatttgtctttaa 17376350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 583 - 718
Target Start/End: Complemental strand, 25493632 - 25493497
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||| |||    
T  25493632 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccaata 25493533  T
Q  683 cacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||||||||||||| ||||||||| |||||||||    
T  25493532 cacccaaatttattggatgtaccatagaatttgcct 25493497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 579 - 718
Target Start/End: Complemental strand, 46872507 - 46872368
Alignment:
Q  579 atatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtacc 678  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| || ||||||||||    
T  46872507 atatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcaaaaaaataactcatttattattaattttacgacttggtgtacc 46872408  T
Q  679 gatacacccaaatttattgggtgtaccatataatttgcct 718  Q
     |||||||||||||||||||||||| |||| |||||||||    
T  46872407 aatacacccaaatttattgggtgtatcatagaatttgcct 46872368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 583 - 715
Target Start/End: Original strand, 8569249 - 8569381
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| || ||||||||||||||    
T  8569249 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaagaaaaactcatttattattaattttacgacttggtgtaccgata 8569348  T
Q  683 cacccaaatttattgggtgtaccatataatttg 715  Q
    |||||||||||||||||||||||||| ||||||    
T  8569349 cacccaaatttattgggtgtaccatagaatttg 8569381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 576 - 708
Target Start/End: Original strand, 52273985 - 52274117
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 675  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||    
T  52273985 ttgatatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgt 52274084  T
Q  676 accgatacacccaaatttattgggtgtaccata 708  Q
    ||||||||| ||||||||||||| |||||||||    
T  52274085 accgatacatccaaatttattggatgtaccata 52274117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 583 - 717
Target Start/End: Original strand, 9223127 - 9223262
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnnc-aactcatttattattaattttatgatttggtgtaccgat 681  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||| ||||||||||||||||    
T  9223127 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaataactcatttattattaattttacgatttggtgtaccgat 9223226  T
Q  682 acacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||||||||||||||||||||| ||||||||    
T  9223227 acacccaaatttattgggtgtaccatagaatttgcc 9223262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 580 - 719
Target Start/End: Original strand, 33829135 - 33829274
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||| |||||||||||||| || ||||||||||     
T  33829135 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatctattattaattttacgacttggtgtacca 33829234  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  33829235 atacacccaaatttattggatgtaccatagaatttgcctt 33829274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 580 - 719
Target Start/End: Complemental strand, 33838831 - 33838692
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||| |||||||||||||| || ||||||||||     
T  33838831 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatctattattaattttacgacttggtgtacca 33838732  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  33838731 atacacccaaatttattggatgtaccatagaatttgcctt 33838692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 583 - 717
Target Start/End: Complemental strand, 27801944 - 27801810
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  27801944 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttctaaaaaacaactcatttattattaattttacgacttggtgtaccgata 27801845  T
Q  683 cacccaaatttattgggtgtaccatataatttgcc 717  Q
    || ||||||||||||||||||| ||| ||||||||    
T  27801844 catccaaatttattgggtgtacaatagaatttgcc 27801810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 580 - 717
Target Start/End: Complemental strand, 10061294 - 10061157
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||| |    
T  10061294 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtactg 10061195  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||||||||||||  ||||||||| ||||||||    
T  10061194 atacacccaaatttattgaatgtaccatagaatttgcc 10061157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 580 - 715
Target Start/End: Complemental strand, 39853094 - 39852959
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||| ||    
T  39853094 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtatcg 39852995  T
Q  680 atacacccaaatttattgggtgtaccatataatttg 715  Q
    ||||||| ||||||||||||||||| ||| ||||||    
T  39852994 atacacctaaatttattgggtgtactatagaatttg 39852959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 583 - 718
Target Start/End: Complemental strand, 48480984 - 48480849
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  48480984 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 48480885  T
Q  683 cacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||||||| ||||||| ||||||| |||||||||    
T  48480884 cacccaaattcattgggtataccatagaatttgcct 48480849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 583 - 717
Target Start/End: Complemental strand, 29171299 - 29171165
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||| |||||    
T  29171299 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtatcgata 29171200  T
Q  683 cacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||| | ||||||||||||| ||||||||    
T  29171199 cacccaaattcactgggtgtaccatagaatttgcc 29171165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 580 - 714
Target Start/End: Original strand, 44647515 - 44647649
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  44647515 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 44647614  T
Q  680 atacacccaaatttattgggtgtaccatataattt 714  Q
    ||||| ||||||||||  ||||||||||| |||||    
T  44647615 atacatccaaatttatcaggtgtaccatagaattt 44647649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 576 - 715
Target Start/End: Original strand, 47860992 - 47861131
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 675  Q
    |||||||||||||||||||||||||| || | ||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||    
T  47860992 ttgatatataaaatttaattatcttaattataaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgt 47861091  T
Q  676 accgatacacccaaatttattgggtgtaccatataatttg 715  Q
    ||||||||||||||||||||||| ||||| ||| ||||||    
T  47861092 accgatacacccaaatttattggatgtacgatagaatttg 47861131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 583 - 717
Target Start/End: Complemental strand, 5057333 - 5057199
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||| ||||||||||||||||| || ||||||||||||||    
T  5057333 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaataactgatttattattaattttacgacttggtgtaccgata 5057234  T
Q  683 cacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||| ||||| ||||||||||||||| ||||||||    
T  5057233 cacctaaattcattgggtgtaccatagaatttgcc 5057199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 583 - 717
Target Start/End: Original strand, 24248075 - 24248209
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    ||||||||||||| |||||||||||||| ||| |||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  24248075 ataaaatttaattctcttagttgtcaatgatataaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgata 24248174  T
Q  683 cacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||||||| | ||||||||| ||||||||    
T  24248175 cacccaaatttattagatgtaccatagaatttgcc 24248209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 580 - 717
Target Start/End: Complemental strand, 27038680 - 27038543
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| || |||||||||||    
T  27038680 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaataactcatttattattaattttacgacttggtgtaccg 27038581  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||| |||||||||||  ||||| ||| ||||||||    
T  27038580 atacactcaaatttattgaatgtactataaaatttgcc 27038543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 580 - 718
Target Start/End: Original strand, 37765523 - 37765662
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttc-nnnnnnncaactcatttattattaattttatgatttggtgtacc 678  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||        ||||||||||||||||||||||| || || ||| |||    
T  37765523 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaattttacgacttagtgcacc 37765622  T
Q  679 gatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||| |||||||||||||||| |||||| |||||||||    
T  37765623 gatacatccaaatttattgggtgcaccatagaatttgcct 37765662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 583 - 718
Target Start/End: Complemental strand, 40850155 - 40850022
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||         |||||||||||||||||||||| || ||||||||||||||    
T  40850155 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttaaaaaaa--aactcatttattattaattttacgacttggtgtaccgata 40850058  T
Q  683 cacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||||||||||||| ||||| ||| |||||||||    
T  40850057 cacccaaatttattggatgtactatagaatttgcct 40850022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 583 - 717
Target Start/End: Original strand, 48868336 - 48868470
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||  ||||||||    
T  48868336 ataaaatttaattatcttagttgttaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggaataccgata 48868435  T
Q  683 cacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||||||||| ||||||||| | ||||||    
T  48868436 cacccaaatttattggatgtaccatagactttgcc 48868470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 583 - 719
Target Start/End: Original strand, 9260089 - 9260225
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||| ||||||| ||||| |||||||||||||||||||||||        |||||||||||||||||||||| || ||| ||||||||||    
T  9260089 ataaaatttaattaccttagttatcaatgatagaaaataattatttttcttcaaaaaaataactcatttattattaattttacgacttgatgtaccgata 9260188  T
Q  683 cacccaaatttattgggtgtaccatataatttgcctt 719  Q
    || ||||||| ||||||||||||||| ||||||||||    
T  9260189 catccaaattcattgggtgtaccatagaatttgcctt 9260225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 583 - 714
Target Start/End: Complemental strand, 41321139 - 41321008
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |       |||| |||| ||||||||||||| || |||||| |||||||    
T  41321139 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttctacaaaaaaacaacacattcattattaattttacgacttggtgaaccgata 41321040  T
Q  683 cacccaaatttattgggtgtaccatataattt 714  Q
    ||||||||||||||||||||||| || |||||    
T  41321039 cacccaaatttattgggtgtaccgtagaattt 41321008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 583 - 717
Target Start/End: Original strand, 33234327 - 33234461
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||| || | ||||||||||||||    
T  33234327 ataaaatttaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactaatttattattaatttaataaattggtgtaccgata 33234426  T
Q  683 cacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||||||||||||||| | | ||||||||    
T  33234427 cacccaaatttattgggtgtactacagaatttgcc 33234461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 583 - 718
Target Start/End: Original strand, 50502617 - 50502756
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  50502617 ataaaatttaattatcttagttgtcaatgatagaaattaattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgata 50502716  T
Q  683 caccc----aaatttattgggtgtaccatataatttgcct 718  Q
    |||||    ||||| |||||||||| |||| |||||||||    
T  50502717 cacccaattaaattcattgggtgtatcataaaatttgcct 50502756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 583 - 717
Target Start/End: Complemental strand, 2684144 - 2684011
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||| |||| |||||    
T  2684144 ataaaatttaattatcttagttgacaatgatagaaaataattatttttcttcaaaaaa-caactcatttattattaattttacgacttgatgtatcgata 2684046  T
Q  683 cacccaaatttattgggtgtaccatataatttgcc 717  Q
    || ||||||||||| ||||||||||| ||||||||    
T  2684045 catccaaatttattaggtgtaccatagaatttgcc 2684011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 583 - 719
Target Start/End: Original strand, 28095021 - 28095156
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||||||       ||| | ||||||||||||||| |||| ||||||||||||||    
T  28095021 ataaaatttaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaacaattaatttattattaatttaatgaattggtgtaccgata 28095120  T
Q  683 cacccaaatttattgggtgtaccatataatttgcctt 719  Q
     ||||||||||||||| ||||||||| ||||||||||    
T  28095121 -acccaaatttattggatgtaccatagaatttgcctt 28095156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 580 - 694
Target Start/End: Original strand, 31571239 - 31571353
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    |||||||| ||||| |||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  31571239 tatataaagtttaactatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 31571338  T
Q  680 atacacccaaattta 694  Q
    ||| |||||||||||    
T  31571339 atagacccaaattta 31571353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 583 - 715
Target Start/End: Original strand, 10635669 - 10635802
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttc-nnnnnnncaactcatttattattaattttatgatttggtgtaccgat 681  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |        |||||||||||||||||| |||| || |||||||||||||    
T  10635669 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttctccaaaaaaaacaactcatttattattaactttacgacttggtgtaccgat 10635768  T
Q  682 acacccaaatttattgggtgtaccatataatttg 715  Q
    ||| ||||| ||||| ||||||||||| ||||||    
T  10635769 acatccaaaattattaggtgtaccatagaatttg 10635802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 583 - 717
Target Start/End: Original strand, 14131627 - 14131756
Alignment:
Q  583 ataaaatttaattatcttagttgtcaa-tcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgat 681  Q
    ||||||||||||| ||||||||||||| | |||||||||||||||||||||||       |||      |||||||||||||| ||||||||||||||||    
T  14131627 ataaaatttaattttcttagttgtcaaataatagaaaataattatttttcttcaataaaacaa------tattattaattttacgatttggtgtaccgat 14131720  T
Q  682 acacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||||||||||||||||||||| ||||||||    
T  14131721 acacccaaatttattgggtgtaccatagaatttgcc 14131756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 583 - 719
Target Start/End: Complemental strand, 49739277 - 49739141
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||||||        |||| ||||||||||||||| |  | ||||||||||||||    
T  49739277 ataaaatttaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaataactaatttattattaatttaacaaattggtgtaccgata 49739178  T
Q  683 cacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||||||||| || ||||||||| ||||||||||    
T  49739177 cacccaaatttatcggatgtaccatagaatttgcctt 49739141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 583 - 716
Target Start/End: Complemental strand, 20280355 - 20280223
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||  |||||||||||  |||||||||||||||||||||        ||||| ||||||||||||||| |||| ||||||||||||||    
T  20280355 ataaaatttaattattatagttgtcaatggtagaaaataattatttttctt-aaaaaaacaactaatttattattaatttaatgaattggtgtaccgata 20280257  T
Q  683 cacccaaatttattgggtgtaccatataatttgc 716  Q
    |||||||||||||||  ||||||||| |||||||    
T  20280256 cacccaaatttattgaatgtaccatagaatttgc 20280223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 583 - 715
Target Start/End: Complemental strand, 22821382 - 22821249
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtaccgat 681  Q
    |||||||||||||||  | | ||||||| |||||||||||||||||||||||        ||||||||||||||||||||| | || |||||||||||||    
T  22821382 ataaaatttaattattattgctgtcaatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaatttaacgacttggtgtaccgat 22821283  T
Q  682 acacccaaatttattgggtgtaccatataatttg 715  Q
    ||| ||||||||||||| ||||||||| ||||||    
T  22821282 acatccaaatttattggatgtaccatagaatttg 22821249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 580 - 718
Target Start/End: Complemental strand, 52079580 - 52079440
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttctt--cnnnnnnncaactcatttattattaattttatgatttggtgtac 677  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||          |||||||||||||||||||||||  | || ||||||    
T  52079580 tatataaaatttaattatcttagttgtcaaagatagaaaataattatttttcttaaaaaaaaaacaactcatttattattaattttacaacttagtgtac 52079481  T
Q  678 cgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||| ||||||||||||  ||||||||  |||||||||    
T  52079480 cgatacatccaaatttattgaatgtaccattgaatttgcct 52079440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 603 - 718
Target Start/End: Original strand, 1658833 - 1658948
Alignment:
Q  603 ttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgatacacccaaatttattgggtgt 702  Q
    |||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||| |||||||||||||| ||||| || | ||||    
T  1658833 ttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttgatgtaccgatacaccaaaattcatcgagtgt 1658932  T
Q  703 accatataatttgcct 718  Q
    |||||| |||||||||    
T  1658933 accatagaatttgcct 1658948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 583 - 665
Target Start/End: Original strand, 31016140 - 31016222
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttat 665  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       |||| |||||||||||||||||||    
T  31016140 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaacacatttattattaattttat 31016222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 657 - 718
Target Start/End: Complemental strand, 49686045 - 49685984
Alignment:
Q  657 taattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49686045 taattttacgacttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcct 49685984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 583 - 696
Target Start/End: Original strand, 41550419 - 41550532
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||  || |||||||| | | |||||||||||||||||||       ||||| ||||||||||||||| || | ||||| ||||||||    
T  41550419 ataaaatttaattattataattgtcaatgagaaaaaataattatttttcttcaaaaaaacaactaatttattattaatttaataaattggtataccgata 41550518  T
Q  683 cacccaaatttatt 696  Q
    ||||||||||||||    
T  41550519 cacccaaatttatt 41550532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 652 - 720
Target Start/End: Complemental strand, 34256517 - 34256450
Alignment:
Q  652 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 720  Q
    ||||||||||| || ||||||||||||||||||| |||| || |||||||||||||| |||||||||||    
T  34256517 attattaatttaataatttggtgtaccgatacactcaaa-ttgttgggtgtaccatagaatttgccttt 34256450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 643 - 717
Target Start/End: Original strand, 31075942 - 31076017
Alignment:
Q  643 aactcattta-ttattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||| |||||||||| |||| | ||||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  31075942 aactcatttaattattaatttaatgaatgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 31076017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 583 - 633
Target Start/End: Original strand, 33771917 - 33771967
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttctt 633  Q
    |||||||||||||||  ||||||||||| ||||||||||||||||||||||    
T  33771917 ataaaatttaattattatagttgtcaatgatagaaaataattatttttctt 33771967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 584 - 662
Target Start/End: Original strand, 41757137 - 41757215
Alignment:
Q  584 taaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattt 662  Q
    ||||||||||||||  ||||||||||||||| ||||||||||||||| |||       ||||| |||||||||||||||    
T  41757137 taaaatttaattattatagttgtcaatcatataaaataattatttttattcaaaaaaacaacttatttattattaattt 41757215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 654 - 718
Target Start/End: Complemental strand, 9166935 - 9166872
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||||||  |||||||||||||| |||||| ||||||| |||||||||| |||||||||||||    
T  9166935 tattaatttattgatttggtgtaccaatacactcaaattt-ttgggtgtactatataatttgcct 9166872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 658 - 716
Target Start/End: Original strand, 38207879 - 38207936
Alignment:
Q  658 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgc 716  Q
    ||||| |||||||||||||||||||||| ||||||| ||| | ||||||||||||||||    
T  38207879 aatttgatgatttggtgtaccgatacactcaaattt-ttgagcgtaccatataatttgc 38207936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 672 - 717
Target Start/End: Original strand, 477796 - 477841
Alignment:
Q  672 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||    
T  477796 gtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 477841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 654 - 715
Target Start/End: Original strand, 11778980 - 11779040
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 715  Q
    ||||||||| |||||||| |||||| |||||| ||||| | |||||||||||||||||||||    
T  11778980 tattaatttaatgatttgttgtaccaatacactcaaatct-ttgggtgtaccatataatttg 11779040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 654 - 719
Target Start/End: Complemental strand, 16482638 - 16482574
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||||| | ||||||||||||| ||||||  ||||| ||||||||||||||| ||||||||||    
T  16482638 tattaatttaaggatttggtgtaccaatacacttaaatt-attgggtgtaccatagaatttgcctt 16482574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 674 - 723
Target Start/End: Complemental strand, 21072819 - 21072770
Alignment:
Q  674 gtaccgatacacccaaatttattgggtgtaccatataatttgcctttaat 723  Q
    |||||||||||  ||||| |||||||||||||||||||||||||| ||||    
T  21072819 gtaccgatacagtcaaatgtattgggtgtaccatataatttgcctataat 21072770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 652 - 717
Target Start/End: Complemental strand, 44978933 - 44978869
Alignment:
Q  652 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||||| || ||||||||||||| ||||| |||| || |||||||||||||| ||||||||    
T  44978933 attattaatttaataatttggtgtaccggtacactcaaa-ttgttgggtgtaccatagaatttgcc 44978869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 658 - 718
Target Start/End: Complemental strand, 7435571 - 7435512
Alignment:
Q  658 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||| |||||||||||||||| ||||| ||||||| ||| |||||||||| |||||||||    
T  7435571 aatttgatgatttggtgtaccggtacactcaaattt-ttgagtgtaccatagaatttgcct 7435512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 654 - 722
Target Start/End: Complemental strand, 35305213 - 35305146
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctttaa 722  Q
    ||||||||| |  |||||||||||| |||||| ||||||  |||||||||||||| |||||||||||||    
T  35305213 tattaatttaagaatttggtgtaccaatacactcaaattg-ttgggtgtaccatagaatttgcctttaa 35305146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 720
Target Start/End: Original strand, 35874300 - 35874348
Alignment:
Q  672 gtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 720  Q
    ||||||| |||||| ||||| |||||||||||||||| |||||||||||    
T  35874300 gtgtaccaatacactcaaatatattgggtgtaccatagaatttgccttt 35874348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 615 - 707
Target Start/End: Original strand, 50631897 - 50631989
Alignment:
Q  615 gaaaataattatttttcttcnnnnnnncaactcattta-ttattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccat 707  Q
    |||| |||||||||||||||       ||||||||||| |||||||||| | | |||||||||||| ||||| |||| ||||||||||||||||    
T  50631897 gaaagtaattatttttcttcaaaaaatcaactcatttaattattaatttaacgctttggtgtaccggtacactcaaa-ttattgggtgtaccat 50631989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 654 - 714
Target Start/End: Original strand, 51781448 - 51781507
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataattt 714  Q
    ||||||||| | ||||||||||||| |||||| |||| ||||||||||||||||| |||||    
T  51781448 tattaatttaaggatttggtgtaccaatacactcaaa-ttattgggtgtaccatagaattt 51781507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 717
Target Start/End: Original strand, 922186 - 922248
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||||||||||||| ||||||||    
T  922186 tattaatttaaggatttggtgtaccaatacactcaaa-ttgttgggtgtaccatagaatttgcc 922248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 630
Target Start/End: Original strand, 5957531 - 5957578
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 630  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  5957531 ataagatttaattattatagttgtcaatgatagaaaataattattttt 5957578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 717
Target Start/End: Complemental strand, 12227256 - 12227121
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt-cttcnnnnnnncaactcattta-ttattaattttatgatttggtgtaccga 680  Q
    |||| ||||||||||  || || ||||| ||||||||||||||||||| ||||       ||||| ||||| |||||||||| ||| |||||||||| |     
T  12227256 ataagatttaattattataattatcaatgatagaaaataattattttttcttcaaaaaaacaactaatttaattattaatttaatgctttggtgtactgg 12227157  T
Q  681 tacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||| |||| |  |||||||||||||| ||||||||    
T  12227156 tacactcaaaatg-ttgggtgtaccatagaatttgcc 12227121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 630
Target Start/End: Complemental strand, 14077463 - 14077416
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 630  Q
    |||||||||||||||  || |||||||| |||||||||||||||||||    
T  14077463 ataaaatttaattattataattgtcaatgatagaaaataattattttt 14077416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 672 - 719
Target Start/End: Original strand, 17554179 - 17554226
Alignment:
Q  672 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    |||||||| ||||| ||||| |||||||||||||||| ||||||||||    
T  17554179 gtgtaccggtacactcaaatatattgggtgtaccatagaatttgcctt 17554226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 671 - 718
Target Start/End: Original strand, 24230931 - 24230978
Alignment:
Q  671 ggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||||||||| ||||| |||||| ||||||||| |||||||||    
T  24230931 ggtgtaccgatacactcaaatatattggatgtaccatagaatttgcct 24230978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 717
Target Start/End: Complemental strand, 27295120 - 27295058
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||||||||||||| ||||||||    
T  27295120 tattaatttaaagatttggtgtaccaatacactcaaa-ttgttgggtgtaccatagaatttgcc 27295058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 721
Target Start/End: Complemental strand, 28493872 - 28493806
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttta 721  Q
    ||||||||| | ||||||||||| | ||||||  ||||| ||||||||||||||| ||||||||||||    
T  28493872 tattaatttaaggatttggtgtaacaatacacttaaatt-attgggtgtaccatagaatttgccttta 28493806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 630
Target Start/End: Original strand, 50534157 - 50534204
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 630  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  50534157 ataagatttaattattatagttgtcaatgatagaaaataattattttt 50534204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 668 - 718
Target Start/End: Complemental strand, 12178655 - 12178605
Alignment:
Q  668 tttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||| ||||||||| ||| ||||| ||||||||||||| ||||||||||||    
T  12178655 tttgatgtaccgatgcactcaaatatattgggtgtaccgtataatttgcct 12178605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 576 - 630
Target Start/End: Original strand, 39084980 - 39085034
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattattttt 630  Q
    |||||| |||| ||||||||||  || |||||||| |||||||||||||||||||    
T  39084980 ttgataaataagatttaattattataattgtcaatgatagaaaataattattttt 39085034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 580 - 610
Target Start/End: Original strand, 49289499 - 49289529
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaat 610  Q
    |||||||||||||||||||||||||||||||    
T  49289499 tatataaaatttaattatcttagttgtcaat 49289529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 670 - 720
Target Start/End: Complemental strand, 51056244 - 51056194
Alignment:
Q  670 tggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 720  Q
    |||||||||| ||||| ||||| |||| ||||||||||| |||||||||||    
T  51056244 tggtgtaccggtacactcaaatatattaggtgtaccatagaatttgccttt 51056194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 715
Target Start/End: Complemental strand, 2247129 - 2247069
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 715  Q
    ||||||||| ||||||||||||||| |||||| ||||| | || ||||||||||| ||||||    
T  2247129 tattaatttaatgatttggtgtaccaatacactcaaatct-ttaggtgtaccatagaatttg 2247069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 576 - 633
Target Start/End: Original strand, 48313574 - 48313631
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttctt 633  Q
    |||||| |||| ||| ||||||  || |||||||| ||||||||||||||||||||||    
T  48313574 ttgataaataagattgaattattataattgtcaatgatagaaaataattatttttctt 48313631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 715
Target Start/End: Complemental strand, 51184104 - 51184044
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 715  Q
    ||||||||| |||||||| |||||| |||||| ||||| | |||||||||||||| ||||||    
T  51184104 tattaatttaatgatttgttgtaccaatacactcaaatct-ttgggtgtaccatagaatttg 51184044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 1e-52; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 580 - 718
Target Start/End: Complemental strand, 25684210 - 25684072
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||    
T  25684210 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccg 25684111  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  25684110 atacacccaaatttattgggtgtaccatagaatttgcct 25684072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 583 - 719
Target Start/End: Original strand, 2148399 - 2148535
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||||| ||||||||||||||    
T  2148399 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttatgacttggtgtaccgata 2148498  T
Q  683 cacccaaatttattgggtgtaccatataatttgcctt 719  Q
    |||||||||||||||||||||||| | ||||||||||    
T  2148499 cacccaaatttattgggtgtaccaaagaatttgcctt 2148535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 580 - 718
Target Start/End: Original strand, 39540989 - 39541127
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||    
T  39540989 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttatgatttggtgtatcg 39541088  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||| ||||||||||||||||||| ||| |||||||||    
T  39541089 atacatccaaatttattgggtgtacaatagaatttgcct 39541127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 580 - 717
Target Start/End: Complemental strand, 10453417 - 10453280
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||    
T  10453417 tatataaaatttaattatcttagttgtcaataatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccg 10453318  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||||||||||| |||||||| || ||||||||    
T  10453317 atacacccaaatttatttggtgtaccgtagaatttgcc 10453280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 580 - 717
Target Start/End: Complemental strand, 15726082 - 15725945
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||| ||    
T  15726082 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtatcg 15725983  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  15725982 atacacccaaatttattgggtgtaccataaaatttgcc 15725945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 580 - 717
Target Start/End: Original strand, 37314107 - 37314244
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || || ||||||||    
T  37314107 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttaggacttagtgtaccg 37314206  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  37314207 atacacccaaatttattgggtgtaccatagaatttgcc 37314244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 580 - 714
Target Start/End: Original strand, 23189337 - 23189471
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||| |||||||    
T  23189337 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttgatgtaccg 23189436  T
Q  680 atacacccaaatttattgggtgtaccatataattt 714  Q
    ||||||||||||||||||||||||||||| |||||    
T  23189437 atacacccaaatttattgggtgtaccatagaattt 23189471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 580 - 714
Target Start/End: Complemental strand, 40340565 - 40340430
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtacc 678  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||||||| |||||||| |    
T  40340565 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaattttatgacttggtgtaac 40340466  T
Q  679 gatacacccaaatttattgggtgtaccatataattt 714  Q
    |||||||||||||||||||||||||||||| |||||    
T  40340465 gatacacccaaatttattgggtgtaccatagaattt 40340430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 580 - 722
Target Start/End: Original strand, 31236859 - 31237001
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||       ||||||||||||||||||||||| || ||| |||||||    
T  31236859 tatataaaatttaattatcttagttgtcaatgatagaaaatagttatttttcttcaaaaaaacaactcatttattattaattttacgacttgatgtaccg 31236958  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcctttaa 722  Q
    ||||| ||||||||||||||||||||||| |||||||| ||||    
T  31236959 atacatccaaatttattgggtgtaccatagaatttgccattaa 31237001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 580 - 714
Target Start/End: Original strand, 42534663 - 42534797
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||| || || |||||||||||    
T  42534663 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattctacgacttggtgtaccg 42534762  T
Q  680 atacacccaaatttattgggtgtaccatataattt 714  Q
    |||||||||||||||| |||||||||||| |||||    
T  42534763 atacacccaaatttatagggtgtaccatagaattt 42534797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 583 - 715
Target Start/End: Original strand, 33001720 - 33001852
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  33001720 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 33001819  T
Q  683 cacccaaatttattgggtgtaccatataatttg 715  Q
    |||||||||| ||||||||||||||| ||||||    
T  33001820 cacccaaattcattgggtgtaccatagaatttg 33001852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 580 - 715
Target Start/End: Complemental strand, 16729861 - 16729726
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| || |||||||||||    
T  16729861 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaataactcatttattattaattttacgacttggtgtaccg 16729762  T
Q  680 atacacccaaatttattgggtgtaccatataatttg 715  Q
    ||||| ||||||||||||| ||||||||| ||||||    
T  16729761 atacatccaaatttattggatgtaccatagaatttg 16729726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 584 - 718
Target Start/End: Complemental strand, 10688526 - 10688392
Alignment:
Q  584 taaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgatac 683  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||       ||| ||||||||||||||||||| || |||||||||||||||    
T  10688526 taaaatttaattatcttagtcgtcaatgatagaaaataattatttttcttcaaaaaagcaaatcatttattattaattttacgacttggtgtaccgatac 10688427  T
Q  684 acccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||||||||| ||||||||| |||||||||    
T  10688426 acccaaatttattggatgtaccatagaatttgcct 10688392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 580 - 717
Target Start/End: Complemental strand, 41631355 - 41631218
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||        ||||| ||||||||||||||||| || |||||||||||    
T  41631355 tatataaaatttaattatcttagttgtcaatgaaagaaaataattatttttctttaaaaaaacaacttatttattattaattttacgacttggtgtaccg 41631256  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  41631255 atacacctaaatttattgggtgtaccataaaatttgcc 41631218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 583 - 718
Target Start/End: Original strand, 22798340 - 22798478
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaata---attatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    |||||||||||||||||||||||||||| ||||||||||   |||||||||||||       |||||||||||||||||||||||  | |||||||||||    
T  22798340 ataaaatttaattatcttagttgtcaatgatagaaaatagtaattatttttcttcaaaaaaacaactcatttattattaattttacaacttggtgtaccg 22798439  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  22798440 atacacccaaatttattgggtgtaccatagaatttgcct 22798478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 576 - 718
Target Start/End: Complemental strand, 3881972 - 3881831
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 675  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||| ||||||||||||||||||||||||||||    
T  3881972 ttgataaataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaat-aacttatttattattaattttatgatttggtgt 3881874  T
Q  676 accgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||| ||||||| ||||||||||  | |||||||||||||||||    
T  3881873 accaatacacctaaatttattgaatataccatataatttgcct 3881831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 580 - 714
Target Start/End: Original strand, 8068589 - 8068722
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||        |||||||| |||||||||||||||| |||||||| ||    
T  8068589 tatataaaatttaattatcttagttgtcaatgataaaaaataattatttttcttcaaaaaat-aactcattcattattaattttatgacttggtgtaacg 8068687  T
Q  680 atacacccaaatttattgggtgtaccatataattt 714  Q
    ||||||||||||||||||||||||||||| |||||    
T  8068688 atacacccaaatttattgggtgtaccatagaattt 8068722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 583 - 717
Target Start/End: Original strand, 13589137 - 13589271
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| |||||||||||||||||  | ||||||||||||||    
T  13589137 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacaacttggtgtaccgata 13589236  T
Q  683 cacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||| |||||||||||| || ||||||||    
T  13589237 cacccaaattcattgggtgtaccgtagaatttgcc 13589271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 583 - 718
Target Start/End: Original strand, 28770219 - 28770352
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||| ||||    
T  28770219 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaa-caactcatttattattaattttacgacttggtgtactgata 28770317  T
Q  683 cacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||||||||||| ||||||||||| |||||||||    
T  28770318 cacccaaatttatt-ggtgtaccatagaatttgcct 28770352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 583 - 716
Target Start/End: Complemental strand, 9530496 - 9530363
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||| ||||||||||||||||| || ||||||||||||||    
T  9530496 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaataactgatttattattaattttacgacttggtgtaccgata 9530397  T
Q  683 cacccaaatttattgggtgtaccatataatttgc 716  Q
    |||||||||| ||||| ||||||||| |||||||    
T  9530396 cacccaaattcattggatgtaccatagaatttgc 9530363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 583 - 717
Target Start/End: Complemental strand, 19126046 - 19125912
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        || |||||||||||||||||||||| ||| | ||||||||    
T  19126046 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaattcatttattattaattttatgacttgatataccgata 19125947  T
Q  683 cacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||| ||||||||||| ||||||||| ||||||||    
T  19125946 cacctaaatttattggatgtaccatagaatttgcc 19125912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 580 - 718
Target Start/End: Complemental strand, 4094795 - 4094657
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||| |||||||       ||||||||||||||||||||||| |||||| |||||||    
T  4094795 tatataaaatttaattatcttagttgccaatgatagaaaataattatctttcttcaaaaaaacaactcatttattattaattttacgatttgatgtaccg 4094696  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcct 718  Q
    | | | ||||||||||||| ||||| ||| |||||||||    
T  4094695 acatatccaaatttattggatgtacgatagaatttgcct 4094657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 583 - 717
Target Start/End: Complemental strand, 32624310 - 32624176
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||| ||||||  ||||||||||| |||||||||||||||||||||||        || | ||||||||||||||| | || ||||||||||||||    
T  32624310 ataaaattaaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaataattaatttattattaatttaacgaattggtgtaccgata 32624211  T
Q  683 cacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||||||||||||||||||| ||||||||    
T  32624210 cacccaaatttattgggtgtaccataaaatttgcc 32624176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 585 - 717
Target Start/End: Original strand, 22279491 - 22279622
Alignment:
Q  585 aaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgataca 684  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||       ||||| | |||||||||||||||  | ||||||||||| ||||    
T  22279491 aaaatttaattatcttagttgtcaatgatagaaaattattatttttcttcaaaaaaacaactgaattattattaattttacaacttggtgtaccggtaca 22279590  T
Q  685 cccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||| ||| ||||||||||| ||||||||    
T  22279591 cccaaattcatt-ggtgtaccatagaatttgcc 22279622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 583 - 678
Target Start/End: Original strand, 43411789 - 43411884
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtacc 678  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| |||||||||||||    
T  43411789 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaactcatttattattaattttacgatttggtgtacc 43411884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 583 - 703
Target Start/End: Original strand, 32063798 - 32063919
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtaccgat 681  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||            ||||||||||||||||||||||| ||||||||||||||||    
T  32063798 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttaaaaaaaaaaaacaactcatttattattaattttacgatttggtgtaccgat 32063897  T
Q  682 acacccaaatttattgggtgta 703  Q
    ||| ||||||||||||| ||||    
T  32063898 acatccaaatttattggatgta 32063919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 583 - 717
Target Start/End: Complemental strand, 11758752 - 11758612
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaa--ctcattta-----ttattaattttatgatttggtgt 675  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||        ||  ||||||||     |||||||||||| || |||||||    
T  11758752 ataaaatttaattatcttagttgtcaatgatagaaaataattatttt-cttcaaaaaaaaaaaactcatttaatttattattaattttacgacttggtgt 11758654  T
Q  676 accgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    || |||||||||||||||||||||||||||||| ||||||||    
T  11758653 actgatacacccaaatttattgggtgtaccatagaatttgcc 11758612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 583 - 717
Target Start/End: Original strand, 37963257 - 37963391
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||  ||||||||||| |||||||||||| ||||||||||        |||| ||||||||||||||| || | ||||||||||||||    
T  37963257 ataaaatttaattattatagttgtcaatgatagaaaataataatttttcttcaaaaaaataactaatttattattaatttaataaattggtgtaccgata 37963356  T
Q  683 cacccaaatttattgggtgtaccatataatttgcc 717  Q
    || |||||||||||||  |||| ||| ||||||||    
T  37963357 catccaaatttattggacgtactatagaatttgcc 37963391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 583 - 719
Target Start/End: Original strand, 34859707 - 34859841
Alignment:
Q  583 ataaaatttaattatcttagttgtc-aatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgat 681  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||       ||| |||||||||| |||||||| || |||| ||||        
T  34859707 ataaaatttaattatcttagttgtcaaatgatagaaaataattatttttcttcaaaaaaacaattcatttattactaattttacgacttggcgtac---g 34859803  T
Q  682 acacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||||||||| ||||||||||||| ||||| ||||    
T  34859804 acacccaaatttaatgggtgtaccatagaatttacctt 34859841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 654 - 717
Target Start/End: Complemental strand, 28332183 - 28332120
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||  |||||||||||||| |||||| ||||||| ||| |||||||||| ||||||||    
T  28332183 tattaatttgttgatttggtgtaccaatacactcaaattttttgagtgtaccatagaatttgcc 28332120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 654 - 721
Target Start/End: Complemental strand, 34302708 - 34302642
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttta 721  Q
    ||||||||| | |||||| |||||| |||||| |||||| ||||||||||||||| ||||||||||||    
T  34302708 tattaatttaaggatttgatgtaccaatacactcaaatt-attgggtgtaccatagaatttgccttta 34302642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 588 - 714
Target Start/End: Complemental strand, 23408381 - 23408255
Alignment:
Q  588 atttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcattta-ttattaattttatgatttggtgtaccgatacacc 686  Q
    ||||||||||  || |||||||| |||||||| |  | |||||||||       |||||| |||| |||||||||| || ||||||||||||| |||||     
T  23408381 atttaattattgtaattgtcaataatagaaaacagatttttttcttcaaaaaaacaactcgtttacttattaatttaataatttggtgtaccggtacact 23408282  T
Q  687 caaatttattgggtgtaccatataattt 714  Q
    |||| || ||||||||||||||||||||    
T  23408281 caaa-ttgttgggtgtaccatataattt 23408255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 677 - 719
Target Start/End: Complemental strand, 27353461 - 27353419
Alignment:
Q  677 ccgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  27353461 ccgatacacccaaatttattgggtataccatagaatttgcctt 27353419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 654 - 719
Target Start/End: Original strand, 4618056 - 4618120
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    |||||||||  |||||||||||||| |||||| ||||||| || ||||||||||| ||||||||||    
T  4618056 tattaatttattgatttggtgtaccaatacactcaaattt-ttaggtgtaccataaaatttgcctt 4618120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 719
Target Start/End: Original strand, 5204967 - 5205027
Alignment:
Q  658 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||| |||||||||||||||| ||||| ||||||| ||| |||||||||| ||||||||||    
T  5204967 aatttgatgatttggtgtaccggtacactcaaattt-ttgagtgtaccatagaatttgcctt 5205027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 654 - 715
Target Start/End: Complemental strand, 6560888 - 6560828
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 715  Q
    ||||||||| | ||||||||||||| |||||| |||| ||||||||||||||||| ||||||    
T  6560888 tattaatttaaggatttggtgtaccaatacactcaaa-ttattgggtgtaccatagaatttg 6560828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 719
Target Start/End: Original strand, 40756891 - 40756951
Alignment:
Q  658 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||| |||||||||||||||| ||||| ||||||| ||| |||||||||| ||||||||||    
T  40756891 aatttgatgatttggtgtaccggtacactcaaattt-ttgagtgtaccatagaatttgcctt 40756951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 643 - 714
Target Start/End: Original strand, 43393088 - 43393159
Alignment:
Q  643 aactcattta-ttattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataattt 714  Q
    |||||||||| |||||| ||| || ||||||||||||| ||||| ||||||| ||| ||||||||||||||||    
T  43393088 aactcatttaattattattttaataatttggtgtaccggtacactcaaattt-ttgagtgtaccatataattt 43393159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 658 - 717
Target Start/End: Original strand, 5141017 - 5141075
Alignment:
Q  658 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||| |||||||||||||||| ||||| ||||||| ||| |||| ||||||||||||||    
T  5141017 aatttgatgatttggtgtaccggtacactcaaattt-ttgagtgtgccatataatttgcc 5141075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 630
Target Start/End: Complemental strand, 6335524 - 6335477
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 630  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  6335524 ataagatttaattattatagttgtcaatgatagaaaataattattttt 6335477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 630
Target Start/End: Complemental strand, 12336347 - 12336300
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 630  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  12336347 ataagatttaattattatagttgtcaatgatagaaaataattattttt 12336300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 630
Target Start/End: Original strand, 13593554 - 13593601
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 630  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  13593554 ataagatttaattattatagttgtcaatgatagaaaataattattttt 13593601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 672 - 719
Target Start/End: Original strand, 32993688 - 32993735
Alignment:
Q  672 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    |||||||| ||||| ||||| |||||||||||||||| ||||||||||    
T  32993688 gtgtaccggtacactcaaatatattgggtgtaccatagaatttgcctt 32993735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 717
Target Start/End: Original strand, 43237697 - 43237759
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||| |  |||||||||||| |||||| |||||| ||||||||||||||| ||||||||    
T  43237697 tattaatttaagaatttggtgtaccaatacactcaaatt-attgggtgtaccatagaatttgcc 43237759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 576 - 630
Target Start/End: Original strand, 2011324 - 2011378
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattattttt 630  Q
    |||||| |||| ||||||||||  || |||||||| |||||||||||||||||||    
T  2011324 ttgataaataagatttaattattataattgtcaatgatagaaaataattattttt 2011378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 576 - 630
Target Start/End: Complemental strand, 9499368 - 9499314
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattattttt 630  Q
    |||||| |||| ||||||||||  || |||||||| |||||||||||||||||||    
T  9499368 ttgataaataagatttaattattataattgtcaatgatagaaaataattattttt 9499314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 576 - 630
Target Start/End: Complemental strand, 9499528 - 9499474
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattattttt 630  Q
    |||||| |||| ||||||||||  || |||||||| |||||||||||||||||||    
T  9499528 ttgataaataagatttaattattataattgtcaatgatagaaaataattattttt 9499474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 654 - 720
Target Start/End: Complemental strand, 27116524 - 27116459
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 720  Q
    |||||||||  ||||| |||||||| |||||| ||||||| |||||||||||||| ||||| |||||    
T  27116524 tattaatttgttgattgggtgtaccaatacactcaaattt-ttgggtgtaccataaaattttccttt 27116459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 719
Target Start/End: Complemental strand, 9589271 - 9589207
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||||| |||||||||||| || |||||| || || | |||||||||||||| ||||||||||    
T  9589271 tattaatttaatgatttggtgtgccaatacactcatatct-ttgggtgtaccatagaatttgcctt 9589207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 715
Target Start/End: Complemental strand, 21605710 - 21605650
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 715  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||||||||||||| ||||||    
T  21605710 tattaatttaaagatttggtgtaccaatacactcaaa-ttgttgggtgtaccatagaatttg 21605650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 672 - 717
Target Start/End: Original strand, 36339208 - 36339253
Alignment:
Q  672 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  36339208 gtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 36339253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 717
Target Start/End: Complemental strand, 36409969 - 36409906
Alignment:
Q  652 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||||| ||| |||||||||||||||||| |||| |  |||||||||||||| ||||||||    
T  36409969 attattaatttaatg-tttggtgtaccgatacactcaaaatg-ttgggtgtaccataaaatttgcc 36409906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 1e-52; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 580 - 718
Target Start/End: Complemental strand, 36569785 - 36569647
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  36569785 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 36569686  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36569685 atacacccaaatttattgggtgtaccatataatttgcct 36569647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 580 - 719
Target Start/End: Complemental strand, 21515126 - 21514987
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||    
T  21515126 tatataaaatttaattatcttagttgtcaatgataaaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccg 21515027  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  21515026 atacacccaaatttattgggtgtaccatagaatttgcctt 21514987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 580 - 718
Target Start/End: Complemental strand, 45629245 - 45629107
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || || ||||||||    
T  45629245 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttagtgtaccg 45629146  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  45629145 atacacccaaatttattgggtgtaccatagaatttgcct 45629107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 580 - 719
Target Start/End: Complemental strand, 44998547 - 44998409
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||        |||||||||||||||||||||||||| ||||||||||     
T  44998547 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttctt-aaaaaaacaactcatttattattaattttatgacttggtgtacca 44998449  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  44998448 atacacccaaatttattgggtgtaccatagaatttgcctt 44998409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 580 - 718
Target Start/End: Original strand, 10779261 - 10779399
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  10779261 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 10779360  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||||||||||||| | ||||||| |||||||||    
T  10779361 atacacccaaatttattggatataccatagaatttgcct 10779399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 580 - 717
Target Start/End: Complemental strand, 24292114 - 24291978
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||     
T  24292114 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaa-caactcatttattattaattttacgacttggtgtacca 24292016  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  24292015 atacacccaaatttattgggtgtaccatagaatttgcc 24291978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 583 - 719
Target Start/End: Complemental strand, 33612657 - 33612521
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  33612657 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactaatttattattaattttacgacttggtgtaccgata 33612558  T
Q  683 cacccaaatttattgggtgtaccatataatttgcctt 719  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  33612557 cacccaaattcattgggtgtaccatagaatttgcctt 33612521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 580 - 718
Target Start/End: Original strand, 16004803 - 16004941
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||| | |||||    
T  16004803 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttgatataccg 16004902  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  16004903 atacacccaaatttattggatgtaccataaaatttgcct 16004941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 583 - 717
Target Start/End: Original strand, 48549939 - 48550073
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  48549939 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttctaaaaaacaactcatttattattaattttacgacttggtgtaccgata 48550038  T
Q  683 cacccaaatttattgggtgtaccatataatttgcc 717  Q
    || ||||||||||||||||||| ||| ||||||||    
T  48550039 catccaaatttattgggtgtacaatagaatttgcc 48550073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 583 - 714
Target Start/End: Original strand, 23639508 - 23639639
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  23639508 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgata 23639607  T
Q  683 cacccaaatttattgggtgtaccatataattt 714  Q
    ||| |||||||||||| ||||||||| |||||    
T  23639608 cactcaaatttattggatgtaccatagaattt 23639639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 583 - 717
Target Start/End: Original strand, 42244810 - 42244944
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||| ||||||||||    
T  42244810 ataaaatttaattctcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttgatgtaccgata 42244909  T
Q  683 cacccaaatttattgggtgtaccatataatttgcc 717  Q
    || ||||||||||||||||||||||| ||||||||    
T  42244910 catccaaatttattgggtgtaccatagaatttgcc 42244944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 580 - 719
Target Start/End: Original strand, 46222262 - 46222403
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn--caactcatttattattaattttatgatttggtgtac 677  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||         ||||||||||||||||||||||| || |||||||||    
T  46222262 tatataaaattaaattatcttagttgtcaatgatagaaaataattgtttttcttcaaaaaaaaacaactcatttattattaattttacgacttggtgtac 46222361  T
Q  678 cgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  46222362 cgatacacccaaatttattgggtgtaccatagaatttgcctt 46222403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 582 - 715
Target Start/End: Original strand, 46633875 - 46634009
Alignment:
Q  582 tataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtaccga 680  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||        ||||||||||||||||||||||| || ||||||||||||    
T  46633875 tataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaattttacgacttggtgtaccga 46633974  T
Q  681 tacacccaaatttattgggtgtaccatataatttg 715  Q
    |||| ||||||||||||||||||||||| ||||||    
T  46633975 tacatccaaatttattgggtgtaccataaaatttg 46634009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 580 - 719
Target Start/End: Complemental strand, 27967647 - 27967507
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatga-tttggtgtacc 678  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||| |||||||       ||||||||||||||||||||||| || || ||||||||    
T  27967647 tatataaaatttaattatcttagttgccaatgatagaaaataattatctttcttcaaaaaaacaactcatttattattaattttacgacttgggtgtacc 27967548  T
Q  679 gatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||||||||||||||||||||| |||| ||||||||||    
T  27967547 gatacacccaaatttattgggtgtaacatagaatttgcctt 27967507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 583 - 719
Target Start/End: Original strand, 46630918 - 46631055
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaa-ctcatttattattaattttatgatttggtgtaccgat 681  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        || ||||||||||||||||| || || |||||||||||||    
T  46630918 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaaactcatttattattaattgtacgacttggtgtaccgat 46631017  T
Q  682 acacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||||||||||||||||||||||| ||||| ||||    
T  46631018 acacccaaatttattgggtgtaccatagaattttcctt 46631055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 583 - 719
Target Start/End: Complemental strand, 54499708 - 54499573
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  54499708 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaa-caactcatttattattaattttacgacttggtgtaccgata 54499610  T
Q  683 cacccaaatttattgggtgtaccatataatttgcctt 719  Q
    || ||||||| | ||| ||||||||| ||||||||||    
T  54499609 catccaaattcactggatgtaccatagaatttgcctt 54499573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 580 - 719
Target Start/End: Original strand, 38955312 - 38955453
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||     
T  38955312 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtacca 38955411  T
Q  680 atacacccaaat--ttattgggtgtaccatataatttgcctt 719  Q
    |||||| |||||  || |||| ||||||||  ||||||||||    
T  38955412 atacactcaaattattgttggatgtaccatggaatttgcctt 38955453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 583 - 715
Target Start/End: Complemental strand, 27635873 - 27635741
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||||||       ||| ||||||||||||||||| | || ||||||||| ||||    
T  27635873 ataaaatttaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaacaattcatttattattaatttaacgacttggtgtactgata 27635774  T
Q  683 cacccaaatttattgggtgtaccatataatttg 715  Q
    ||||||||||||||| ||||||| || ||||||    
T  27635773 cacccaaatttattgagtgtaccgtagaatttg 27635741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 583 - 719
Target Start/End: Complemental strand, 52257266 - 52257130
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||        ||||||||||||||||||||||| || ||| |  | |||||    
T  52257266 ataaaatttaattatcttagttatcaatgatagaaaataattatttttctttaaaaaaacaactcatttattattaattttacgacttgatacatcgata 52257167  T
Q  683 cacccaaatttattgggtgtaccatataatttgcctt 719  Q
    |||||||||||||||| | ||||||| ||||||||||    
T  52257166 cacccaaatttattggatataccatagaatttgcctt 52257130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 583 - 717
Target Start/End: Original strand, 54505838 - 54505973
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtaccgat 681  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||||||        ||||  ||||||||||||||| |  | |||||||||||||    
T  54505838 ataaaatttaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaaacaaccaatttattattaatttaacaaattggtgtaccgat 54505937  T
Q  682 acacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||||||||||||||||||||| ||||||||    
T  54505938 acacccaaatttattgggtgtaccatagaatttgcc 54505973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 576 - 719
Target Start/End: Original strand, 42680856 - 42680999
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 675  Q
    |||||| |||||||||||||||  |||||| |||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||| |    
T  42680856 ttgataaataaaatttaattattatagttgccaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtat 42680955  T
Q  676 accgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||| ||||| | ||||||| | | |||||| || ||||||||||    
T  42680956 accaatacatctaaatttagtagatgtaccgtagaatttgcctt 42680999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 576 - 717
Target Start/End: Complemental strand, 56016937 - 56016796
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 675  Q
    |||||| ||||||||||||||   ||||||||||| |||||||||||||||||||||||        |||||||||||||||||  | | || || ||||    
T  56016937 ttgataaataaaatttaattactatagttgtcaatgatagaaaataattatttttcttcaaaaaaataactcatttattattaacctaacgacttagtgt 56016838  T
Q  676 accgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||| |||||||||||| ||||||||| || |||||    
T  56016837 accgatacacacaaatttattggatgtaccataaaaattgcc 56016796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 583 - 717
Target Start/End: Complemental strand, 2526305 - 2526171
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgta-ccgat 681  Q
    |||||||||||||||||||||||||||| ||| |||||||||| ||||||||       ||||||||||||||||||||||| ||   | |  | || ||    
T  2526305 ataaaatttaattatcttagttgtcaatgatataaaataattacttttcttcaaaaaaacaactcatttattattaattttacga-ccgatacacccaat 2526207  T
Q  682 acacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||||||||||||||||||||| ||||||||    
T  2526206 acacccaaatttattgggtgtaccatagaatttgcc 2526171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 648 - 714
Target Start/End: Original strand, 23645231 - 23645297
Alignment:
Q  648 atttattattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataattt 714  Q
    ||||||||||||||||| || ||||||||||||||||| |||||||||||| ||||||||| |||||    
T  23645231 atttattattaattttacgacttggtgtaccgatacactcaaatttattggatgtaccatagaattt 23645297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 580 - 630
Target Start/End: Complemental strand, 45754518 - 45754468
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattattttt 630  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  45754518 tatataaaatttaattattttagttgtcaatgatagaaaataattattttt 45754468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 583 - 633
Target Start/End: Original strand, 42080600 - 42080650
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttctt 633  Q
    |||||||||||||||  ||||||||||| ||||||||||||||||||||||    
T  42080600 ataaaatttaattattatagttgtcaatgatagaaaataattatttttctt 42080650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 669 - 718
Target Start/End: Original strand, 10972959 - 10973008
Alignment:
Q  669 ttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||||||||||||||||||||||||||| | ||||||| |||||||||    
T  10972959 ttggtgtaccgatacacccaaatttattggatataccatagaatttgcct 10973008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 658 - 719
Target Start/End: Complemental strand, 12756060 - 12756000
Alignment:
Q  658 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||| |||||||||||||||||||||| ||||||| ||| |||||||||| ||||||||||    
T  12756060 aatttgatgatttggtgtaccgatacactcaaattt-ttgagtgtaccatagaatttgcctt 12756000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 642 - 717
Target Start/End: Original strand, 13548735 - 13548810
Alignment:
Q  642 caactcattta-ttattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||||| |||||||||| |||||||||||||||| ||||| ||||||| |||| || |||||| ||||||||    
T  13548735 caactcatttaattattaatttaatgatttggtgtaccggtacactcaaattt-ttggatgcaccataaaatttgcc 13548810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 603 - 693
Target Start/End: Complemental strand, 16601724 - 16601633
Alignment:
Q  603 ttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcattta-ttattaattttatgatttggtgtaccgatacacccaaattt 693  Q
    |||||||| ||| ||||||||| |||||||||       ||||||||||| |||||||||| | |||||||||||||| ||||| |||||||    
T  16601724 ttgtcaatgataaaaaataattctttttcttcaaaaatacaactcatttaattattaatttaacgatttggtgtaccggtacactcaaattt 16601633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 654 - 720
Target Start/End: Complemental strand, 36091121 - 36091056
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 720  Q
    ||||||||| ||||||||||||||| |||||| || || | |||| |||||||||||||||||||||    
T  36091121 tattaatttaatgatttggtgtaccaatacactcatatct-ttggatgtaccatataatttgccttt 36091056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 715
Target Start/End: Original strand, 44957267 - 44957323
Alignment:
Q  658 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 715  Q
    ||||| |||||||||||||||||||||| ||||||| ||| |||||||||| ||||||    
T  44957267 aatttgatgatttggtgtaccgatacactcaaattt-ttgagtgtaccatagaatttg 44957323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 654 - 718
Target Start/End: Complemental strand, 31681399 - 31681336
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||||||  |||||||||||||| ||||||| |||||| || ||||||||||| |||||||||    
T  31681399 tattaatttattgatttggtgtaccaatacaccaaaattt-ttaggtgtaccatagaatttgcct 31681336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 642 - 717
Target Start/End: Original strand, 53936843 - 53936919
Alignment:
Q  642 caactcatttat-tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||||  ||||||||| | || | ||||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  53936843 caactcatttaactattaatttaaagaatgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 53936919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 717
Target Start/End: Complemental strand, 3716387 - 3716325
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||| | ||||||||||||| |||||| |||| ||||||| ||||||||| ||||||||    
T  3716387 tattaatttaaggatttggtgtaccaatacactcaaa-ttattggatgtaccatagaatttgcc 3716325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 717
Target Start/End: Original strand, 18425462 - 18425524
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||| ||||||||||||||| |||||| || || | |||||||||||||| ||||||||    
T  18425462 tattaatttaatgatttggtgtaccaatacactcatatct-ttgggtgtaccatagaatttgcc 18425524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 717
Target Start/End: Complemental strand, 30342887 - 30342825
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||| | ||||||||||||| |||||| |||||   |||||||||||||||||||||||    
T  30342887 tattaatttaaagatttggtgtaccaatacactcaaatgg-ttgggtgtaccatataatttgcc 30342825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 634
Target Start/End: Original strand, 39412442 - 39412493
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttc 634  Q
    |||| ||||||||||  ||||||||||| ||||||||||||| |||||||||    
T  39412442 ataagatttaattattatagttgtcaatgatagaaaataattttttttcttc 39412493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 658 - 717
Target Start/End: Original strand, 40438983 - 40439041
Alignment:
Q  658 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||| |||||||||||||||| ||||| ||||||| ||| |||||||||| ||||||||    
T  40438983 aatttaatgatttggtgtaccggtacactcaaattt-ttgagtgtaccatagaatttgcc 40439041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 672 - 719
Target Start/End: Complemental strand, 50607729 - 50607682
Alignment:
Q  672 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    |||||||| ||||| ||||| |||||||||||||||| ||||||||||    
T  50607729 gtgtaccggtacactcaaatatattgggtgtaccataaaatttgcctt 50607682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 654 - 720
Target Start/End: Original strand, 1414443 - 1414508
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 720  Q
    ||||||||| ||||||||||||||| |||||| ||||| | || ||||| ||||| |||||||||||    
T  1414443 tattaatttaatgatttggtgtaccaatacactcaaatct-ttaggtgtgccataaaatttgccttt 1414508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 672 - 714
Target Start/End: Original strand, 23059131 - 23059173
Alignment:
Q  672 gtgtaccgatacacccaaatttattgggtgtaccatataattt 714  Q
    |||||||||||||| ||||| |||||||||||||||| |||||    
T  23059131 gtgtaccgatacactcaaatatattgggtgtaccatagaattt 23059173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 658 - 720
Target Start/End: Original strand, 39103887 - 39103948
Alignment:
Q  658 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 720  Q
    ||||| ||||||| |||||||| ||||| ||||||| ||| |||||||||| |||||||||||    
T  39103887 aatttgatgatttagtgtaccggtacactcaaattt-ttgagtgtaccatagaatttgccttt 39103948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 718
Target Start/End: Original strand, 46216114 - 46216179
Alignment:
Q  652 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||||||||  ||||| |||||||| |||||| ||||||| |||||||||| ||| |||||||||    
T  46216114 attattaatttgttgattgggtgtaccaatacactcaaattt-ttgggtgtacaatagaatttgcct 46216179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 672 - 718
Target Start/End: Original strand, 48647383 - 48647429
Alignment:
Q  672 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||||| ||||| ||||| |||||||||||||||| |||||||||    
T  48647383 gtgtaccggtacactcaaatatattgggtgtaccatagaatttgcct 48647429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 643 - 719
Target Start/End: Complemental strand, 19842512 - 19842436
Alignment:
Q  643 aactcattta-ttattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    |||||||||| |||||||||| |  ||||||||||| | ||||| ||||||| |||| ||||||||| ||||||||||    
T  19842512 aactcatttaattattaatttaacaatttggtgtactggtacactcaaattt-ttggatgtaccatagaatttgcctt 19842436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 720
Target Start/End: Original strand, 24535850 - 24535895
Alignment:
Q  675 taccgatacacccaaatttattgggtgtaccatataatttgccttt 720  Q
    ||||| ||||| ||||| || |||||||||||||||||||||||||    
T  24535850 taccggtacactcaaatatagtgggtgtaccatataatttgccttt 24535895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 669 - 718
Target Start/End: Original strand, 33491954 - 33492003
Alignment:
Q  669 ttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||||| ||||| ||||| ||||||||||||| || |||||||||    
T  33491954 ttggtgtaccggtacactcaaatatattgggtgtaccgtagaatttgcct 33492003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 719
Target Start/End: Original strand, 34280573 - 34280637
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||||||||||||| || |||||||    
T  34280573 tattaatttaaggatttggtgtaccaatacactcaaa-ttgttgggtgtaccatagaacttgcctt 34280637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 672 - 717
Target Start/End: Original strand, 50383691 - 50383736
Alignment:
Q  672 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||| ||||| ||||| |||||| ||||||||||||||||||    
T  50383691 gtgtaccggtacactcaaatatattggatgtaccatataatttgcc 50383736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 719
Target Start/End: Original strand, 52324311 - 52324375
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||||| ||| |||||||||||| ||||| ||||  | |||||||||||||| ||||||||||    
T  52324311 tattaatttaatgctttggtgtaccggtacactcaaa-atgttgggtgtaccataaaatttgcctt 52324375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 6e-52; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 580 - 717
Target Start/End: Complemental strand, 24505260 - 24505123
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||||| |||||||||||    
T  24505260 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttatgacttggtgtaccg 24505161  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  24505160 atacacccaaatttattgggtgtaccatagaatttgcc 24505123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 583 - 718
Target Start/End: Complemental strand, 15090802 - 15090667
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||| |||||||||||||| |||||||||||||||||    
T  15090802 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatgtattattaattttacgatttggtgtaccgata 15090703  T
Q  683 cacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||||||||||||||||||||||| |||||||||    
T  15090702 cacccaaatttattgggtgtaccatagaatttgcct 15090667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 580 - 717
Target Start/End: Complemental strand, 47220092 - 47219956
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| ||||||||||||||    
T  47220092 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaa-aactcatttattattaattttacgatttggtgtaccg 47219994  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  47219993 atacacccaaatttattgggtgtaccatagaatttgcc 47219956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 576 - 719
Target Start/End: Complemental strand, 1282326 - 1282183
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 675  Q
    |||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || || ||||    
T  1282326 ttgataaataaaatttaattatcttagttctcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttagtgt 1282227  T
Q  676 accgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  1282226 accgatacacccaaatttattgggtgtaccatagaatttgcctt 1282183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 576 - 718
Target Start/End: Original strand, 45197070 - 45197212
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 675  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || || ||||    
T  45197070 ttgataaataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttagtgt 45197169  T
Q  676 accgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||| ||||||||||||||||||||||| |||||||||    
T  45197170 accgatacatccaaatttattgggtgtaccatagaatttgcct 45197212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 585 - 717
Target Start/End: Complemental strand, 3062034 - 3061902
Alignment:
Q  585 aaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgataca 684  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||        |||||||||||||||||||||| || ||||||||||||||||    
T  3062034 aaaatttaattatcttagttgtcaatgatagaaaataattattttttttcaaaaaaataactcatttattattaattttacgacttggtgtaccgataca 3061935  T
Q  685 cccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||||||||||||||||||||||||||    
T  3061934 cccaaatttattgggtgtaccatataatttgcc 3061902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 583 - 717
Target Start/End: Complemental strand, 25867039 - 25866905
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||       ||||||||||||||||||||||| || ||||||||| ||||    
T  25867039 ataaaatttaattatcttagttgtcaatgataaaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtactgata 25866940  T
Q  683 cacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||||||||||||||||||| ||||||||    
T  25866939 cacccaaatttattgggtgtaccatagaatttgcc 25866905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 583 - 717
Target Start/End: Original strand, 32186698 - 32186832
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  32186698 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttctaaaaaacaactcatttattattaattttacgacttggtgtaccgata 32186797  T
Q  683 cacccaaatttattgggtgtaccatataatttgcc 717  Q
    || ||||||||||||||||||| ||| ||||||||    
T  32186798 catccaaatttattgggtgtacaatagaatttgcc 32186832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 583 - 717
Target Start/End: Original strand, 41715414 - 41715548
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  41715414 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttctaaaaaacaactcatttattattaattttacgacttggtgtaccgata 41715513  T
Q  683 cacccaaatttattgggtgtaccatataatttgcc 717  Q
    || ||||||||||||||||||| ||| ||||||||    
T  41715514 catccaaatttattgggtgtacaatagaatttgcc 41715548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 583 - 718
Target Start/End: Original strand, 2038368 - 2038503
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  2038368 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 2038467  T
Q  683 cacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||||||| ||||| ||||||||| |||||||||    
T  2038468 cacccaaattcattggatgtaccataaaatttgcct 2038503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 580 - 719
Target Start/End: Complemental strand, 42039439 - 42039300
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||  | |||||||| ||    
T  42039439 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacaacttggtgtatcg 42039340  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||||||||||||||| |||||| || ||||||||||    
T  42039339 atacacccaaatttattggatgtaccgtagaatttgcctt 42039300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 580 - 718
Target Start/End: Complemental strand, 18922713 - 18922575
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || |||||||||||    
T  18922713 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaataaaacaactaatttattattaattttacgacttggtgtaccg 18922614  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||||||||||||  ||||| ||| |||||||||    
T  18922613 atacacccaaatttattgaatgtactatagaatttgcct 18922575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 583 - 725
Target Start/End: Original strand, 42902659 - 42902801
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||| ||||||||||||||||| || |||||||||| |||    
T  42902659 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaacttatttattattaattttacgacttggtgtaccaata 42902758  T
Q  683 cacccaaatttattgggtgtaccatataatttgcctttaataa 725  Q
    |||||||||||||| ||||||||||| |||||||||| |||||    
T  42902759 cacccaaatttattaggtgtaccatagaatttgccttaaataa 42902801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 583 - 717
Target Start/End: Original strand, 47069234 - 47069368
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       || | ||||||||||||||||||||| ||||||||||||||    
T  47069234 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacatcccatttattattaattttatgacttggtgtaccgata 47069333  T
Q  683 cacccaaatttattgggtgtaccatataatttgcc 717  Q
    || ||||||||||||| ||||||||| ||||||||    
T  47069334 catccaaatttattggatgtaccatagaatttgcc 47069368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 583 - 718
Target Start/End: Original strand, 40947246 - 40947381
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || || ||||| | |||    
T  40947246 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgaattagtgtaacaata 40947345  T
Q  683 cacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||||||||||||| ||||||||| |||||||||    
T  40947346 cacccaaatttattggatgtaccatagaatttgcct 40947381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 583 - 717
Target Start/End: Original strand, 27130816 - 27130950
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtaccgat 681  Q
    ||||||||||||||| |||||||| ||| |||||||||||||||||||||||        |||||||||||||||||||||||||| ||||||||||| |    
T  27130816 ataaaatttaattatattagttgt-aatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaattttatgacttggtgtaccggt 27130914  T
Q  682 acacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||||||||||||||||||||| ||||||||    
T  27130915 acacccaaatttattgggtgtaccatagaatttgcc 27130950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 583 - 720
Target Start/End: Original strand, 7574387 - 7574524
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||| | |  ||||||||||||||    
T  7574387 ataaaatttaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactaatttattattaatttaacggattggtgtaccgata 7574486  T
Q  683 cacccaaatttattgggtgtaccatataatttgccttt 720  Q
    || ||||||||||||| ||||||||| |||||||||||    
T  7574487 catccaaatttattggatgtaccatagaatttgccttt 7574524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 585 - 717
Target Start/End: Complemental strand, 17334870 - 17334739
Alignment:
Q  585 aaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgataca 684  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||       ||||| | |||||||||||||||  | ||||||||||| ||||    
T  17334870 aaaatttaattatcttagttgtcaatgatagaaaattattatttttcttcaaaaaaacaactgaattattattaattttacaacttggtgtaccggtaca 17334771  T
Q  685 cccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||| ||| ||||||||||| ||||||||    
T  17334770 cccaaattcatt-ggtgtaccatagaatttgcc 17334739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 580 - 664
Target Start/End: Complemental strand, 9923207 - 9923123
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaatttta 664  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||    
T  9923207 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaatttta 9923123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 583 - 715
Target Start/End: Original strand, 33704821 - 33704952
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||        ||||||||||||||||||||||| || ||| | ||||||||    
T  33704821 ataaaatttaattatcttagttgccaatgatagaaaataattatttttctt-aaaaaaacaactcatttattattaattttacgacttgatataccgata 33704919  T
Q  683 cacccaaatttattgggtgtaccatataatttg 715  Q
    ||   ||||||||||| ||||||||| ||||||    
T  33704920 catataaatttattggatgtaccatagaatttg 33704952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 583 - 678
Target Start/End: Complemental strand, 39444099 - 39444004
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtacc 678  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||    
T  39444099 ataaaatataattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtacc 39444004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 588 - 720
Target Start/End: Complemental strand, 13806491 - 13806359
Alignment:
Q  588 atttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcattta-ttattaattttatgatttggtgtaccgatacacc 686  Q
    ||||||||||  || |||||||| |||||||| || |||||||||||       |||||| |||| |||||||||| || |||||||||| || || ||     
T  13806491 atttaattattgtaattgtcaatgatagaaaacaaatatttttcttcaaaaaaacaactcgtttaattattaatttaataatttggtgtatcggtatact 13806392  T
Q  687 caaatttattgggtgtaccatataatttgccttt 720  Q
    |||||| ||||| |||||||||||||||||||||    
T  13806391 caaatt-attggatgtaccatataatttgccttt 13806359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 642 - 717
Target Start/End: Original strand, 9682357 - 9682432
Alignment:
Q  642 caactcattta-ttattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||||| |||||||||| |||||||||||||||| ||||| ||||||| |||| || |||||| ||||||||    
T  9682357 caactcatttaattattaatttaatgatttggtgtaccggtacactcaaattt-ttggatgcaccataaaatttgcc 9682432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 588 - 718
Target Start/End: Complemental strand, 1343150 - 1343018
Alignment:
Q  588 atttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn--caactcattta-ttattaattttatgatttggtgtaccgataca 684  Q
    ||||||||||  || |||||||| |||||||| ||||||||||||||         |||||| |||| ||||| |||| || ||||||||||||| ||||    
T  1343150 atttaattattgtaattgtcaatgatagaaaacaattatttttcttcaaaaaaaaacaactcgtttaattattgatttaataatttggtgtaccggtaca 1343051  T
Q  685 cccaaatttattgggtgtaccatataatttgcct 718  Q
    | |||| || |||||||||||||| |||||||||    
T  1343050 ctcaaa-ttgttgggtgtaccatagaatttgcct 1343018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 672 - 717
Target Start/End: Original strand, 6791799 - 6791844
Alignment:
Q  672 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||    
T  6791799 gtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 6791844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 649 - 722
Target Start/End: Complemental strand, 31743367 - 31743295
Alignment:
Q  649 tttattattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctttaa 722  Q
    |||| ||||||||| ||||||||||| || | ||||| ||||||| ||| |||||||||| |||||||||||||    
T  31743367 tttaatattaatttgatgatttggtgcactggtacactcaaattt-ttgagtgtaccatagaatttgcctttaa 31743295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 658 - 719
Target Start/End: Complemental strand, 31760051 - 31759991
Alignment:
Q  658 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||| |||||||||||||||| ||||| ||||||| ||| |||||||||| ||||||||||    
T  31760051 aatttgatgatttggtgtaccggtacactcaaattt-ttgagtgtaccataaaatttgcctt 31759991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 654 - 718
Target Start/End: Original strand, 41913438 - 41913501
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||| |||||||||||||||||||    
T  41913438 tattaatttaaggatttggtgtaccaatacactcaaa-ttgttggatgtaccatataatttgcct 41913501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 720
Target Start/End: Original strand, 41968784 - 41968832
Alignment:
Q  672 gtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 720  Q
    |||||||||||||| ||||| |||| ||||||||||| |||||||||||    
T  41968784 gtgtaccgatacactcaaatatattaggtgtaccatagaatttgccttt 41968832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 654 - 718
Target Start/End: Original strand, 45857818 - 45857881
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||| ||||||||||||||| |||||| || || | |||||||||||||| |||||||||    
T  45857818 tattaatttaatgatttggtgtaccaatacactcatatct-ttgggtgtaccatagaatttgcct 45857881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 672 - 728
Target Start/End: Original strand, 47369581 - 47369637
Alignment:
Q  672 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcctttaataatat 728  Q
    ||||| || ||||| ||||| |||||||||||||||| |||||||||||||| ||||    
T  47369581 gtgtatcggtacactcaaatatattgggtgtaccatagaatttgcctttaattatat 47369637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 717
Target Start/End: Complemental strand, 18990153 - 18990091
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||  |||||||||||||| |||||| ||||||| || ||||||||||| ||||||||    
T  18990153 tattaatttattgatttggtgtaccaatacactcaaattt-tttggtgtaccatagaatttgcc 18990091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 658 - 717
Target Start/End: Original strand, 21920040 - 21920098
Alignment:
Q  658 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||| |||||||||||||||| ||||| ||||||| ||| |||||||||| ||||||||    
T  21920040 aatttgatgatttggtgtaccggtacactcaaattt-ttgagtgtaccatagaatttgcc 21920098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 630
Target Start/End: Original strand, 27427405 - 27427452
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 630  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  27427405 ataagatttaattattatagttgtcaatgatagaaaataattattttt 27427452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 672 - 715
Target Start/End: Original strand, 36533409 - 36533452
Alignment:
Q  672 gtgtaccgatacacccaaatttattgggtgtaccatataatttg 715  Q
    |||||||| ||||| ||||| |||||||||||||||||||||||    
T  36533409 gtgtaccggtacactcaaatatattgggtgtaccatataatttg 36533452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 717
Target Start/End: Original strand, 44964165 - 44964227
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||| |||||||| |||||| |||||| ||||| | || ||||||||||||||||||||    
T  44964165 tattaatttaatgatttgttgtaccaatacactcaaatct-ttaggtgtaccatataatttgcc 44964227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 671 - 717
Target Start/End: Complemental strand, 17340839 - 17340794
Alignment:
Q  671 ggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||||||||||||||| ||| ||||||||||| ||||||||    
T  17340839 ggtgtaccgatacacccaaattcatt-ggtgtaccatagaatttgcc 17340794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 672 - 718
Target Start/End: Original strand, 41771770 - 41771816
Alignment:
Q  672 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||||| ||||| ||||| |||||||||||||||| |||||||||    
T  41771770 gtgtaccggtacactcaaatatattgggtgtaccataaaatttgcct 41771816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 672 - 714
Target Start/End: Original strand, 46291461 - 46291503
Alignment:
Q  672 gtgtaccgatacacccaaatttattgggtgtaccatataattt 714  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||    
T  46291461 gtgtaccggtacactcaaatatattgggtgtaccatataattt 46291503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 719
Target Start/End: Complemental strand, 17833989 - 17833929
Alignment:
Q  658 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||| |||||||||||| ||| ||||| ||||||| ||| |||||||||| ||||||||||    
T  17833989 aatttgatgatttggtgtgccggtacactcaaattt-ttgagtgtaccatagaatttgcctt 17833929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 666 - 719
Target Start/End: Original strand, 27800384 - 27800436
Alignment:
Q  666 gatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    |||||||||||||| ||||| ||||||| |||| ||||||||| ||||||||||    
T  27800384 gatttggtgtaccggtacactcaaattt-ttggatgtaccatagaatttgcctt 27800436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 719
Target Start/End: Original strand, 30624067 - 30624131
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||||| |  |||||||||||| |||||| |||||| ||||||||||||||| || |||||||    
T  30624067 tattaatttaaaaatttggtgtaccaatacactcaaatt-attgggtgtaccatagaacttgcctt 30624131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 583 - 676
Target Start/End: Complemental strand, 31311480 - 31311386
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcattt-attattaattttatgatttggtgta 676  Q
    |||| ||||||||||  || |||||||| ||||||||||||| |||||||||       |||||||||| ||||||||||| | |||||| ||||    
T  31311480 ataagatttaattattataattgtcaatgatagaaaataattctttttcttcaaaaaaacaactcatttaattattaatttaacgatttgatgta 31311386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 3e-50; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 580 - 718
Target Start/End: Complemental strand, 33830667 - 33830529
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||       |||||||||||||||||||||||||| |||||||||||    
T  33830667 tatataaaatttaattatcttagttgtcaatgatagaaaataattattttttttcaaaaaaacaactcatttattattaattttatgacttggtgtaccg 33830568  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  33830567 atacacccaaatttattgggtgtaccatagaatttgcct 33830529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 583 - 717
Target Start/End: Complemental strand, 45927354 - 45927220
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| |||||||||||||||||    
T  45927354 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccgata 45927255  T
Q  683 cacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||||||||||||||||||| ||||||||    
T  45927254 cacccaaatttattgggtgtaccataaaatttgcc 45927220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 580 - 719
Target Start/End: Complemental strand, 2667621 - 2667482
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||       |||||||||||||||||||||||||| |||||||||||    
T  2667621 tatataaaatttaattatcttagttgtcaatgatagaaaataataatttttcttcaaaaaaacaactcatttattattaattttatgacttggtgtaccg 2667522  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    |||||||| |||||||||||||||||||| ||||||||||    
T  2667521 atacaccctaatttattgggtgtaccatagaatttgcctt 2667482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 580 - 719
Target Start/End: Original strand, 52782429 - 52782568
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  52782429 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 52782528  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  52782529 atacacccaaatttattggatgtaccatagaatttgcctt 52782568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 580 - 721
Target Start/End: Complemental strand, 53186141 - 53186000
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||    
T  53186141 tatataaaatttaattatcttagttgtcaatgataaaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccg 53186042  T
Q  680 atacacccaaatttattgggtgtaccatataatttgccttta 721  Q
    ||||||||||||||||| |||||||| || ||||||||||||    
T  53186041 atacacccaaatttatttggtgtaccgtagaatttgccttta 53186000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 576 - 718
Target Start/End: Original strand, 9322699 - 9322841
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 675  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||       |||||||||||||||| |||||| || |||||||    
T  9322699 ttgatatataaaatttaattatcttagttgtcaatgatataaaataattatttttcttcaaaaaaacaactcatttattatttattttacgacttggtgt 9322798  T
Q  676 accgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||||| ||||||||||||||||||||| |||||||||    
T  9322799 accgatacaccaaaatttattgggtgtaccatagaatttgcct 9322841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 580 - 722
Target Start/End: Original strand, 44500385 - 44500527
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||| |||||||       ||||||||||||||||||||||| || |||||||||||    
T  44500385 tatataaaatttaattatcttagttgccaatgatagaaaataattatctttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 44500484  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcctttaa 722  Q
    || |||||||||||||||||||||||||| |||||||||||||    
T  44500485 atgcacccaaatttattgggtgtaccatagaatttgcctttaa 44500527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 580 - 718
Target Start/End: Complemental strand, 44962739 - 44962601
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||     
T  44962739 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtacca 44962640  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  44962639 atacacccaaatttattggatgtaccatagaatttgcct 44962601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 580 - 717
Target Start/End: Complemental strand, 37567355 - 37567218
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  37567355 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 37567256  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||| |||||||||||||||||||| || ||||||||    
T  37567255 atacatccaaatttattgggtgtaccgtagaatttgcc 37567218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 583 - 720
Target Start/End: Complemental strand, 54009039 - 54008902
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  54009039 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 54008940  T
Q  683 cacccaaatttattgggtgtaccatataatttgccttt 720  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  54008939 cacccaaattcattgggtgtaccatagaatttgccttt 54008902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 582 - 718
Target Start/End: Original strand, 48925683 - 48925819
Alignment:
Q  582 tataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgat 681  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||||    
T  48925683 tataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgat 48925782  T
Q  682 acacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||  |||||||||||||||||||||| |||||||||    
T  48925783 acattcaaatttattgggtgtaccatagaatttgcct 48925819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 583 - 717
Target Start/End: Complemental strand, 32720119 - 32719985
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    ||||||||||||||||||| |||| ||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  32720119 ataaaatttaattatcttaattgttaatgatagaaaataattatttttcttctaaaaaacaactcatttattattaattttacgacttggtgtaccgata 32720020  T
Q  683 cacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||||||||||||||||||| ||||||||    
T  32720019 cacccaaatttattgggtgtaccatagaatttgcc 32719985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 583 - 719
Target Start/End: Complemental strand, 1326735 - 1326599
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| |||||||||||||||||  ||||||||||||||||    
T  1326735 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacaatttggtgtaccgata 1326636  T
Q  683 cacccaaatttattgggtgtaccatataatttgcctt 719  Q
    || ||||||| ||||||||||||||| ||||||||||    
T  1326635 catccaaattcattgggtgtaccatagaatttgcctt 1326599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 580 - 731
Target Start/End: Original strand, 49951195 - 49951346
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||| ||| |||    
T  49951195 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttgatgtgccg 49951294  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcctttaataatatgtg 731  Q
    ||||| ||||||||||| ||||||||||| |||||||| ||| | |||||||    
T  49951295 atacatccaaatttattaggtgtaccatagaatttgccattatttatatgtg 49951346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 583 - 718
Target Start/End: Original strand, 55365647 - 55365783
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnnc-aactcatttattattaattttatgatttggtgtaccgat 681  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||| || |||||||||||||    
T  55365647 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaataactcatttattattaattttacgacttggtgtaccgat 55365746  T
Q  682 acacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  55365747 acacccaaatttattggatgtaccatagaatttgcct 55365783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 583 - 717
Target Start/End: Original strand, 48389031 - 48389166
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtaccgat 681  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        ||||||||||||||||||||||| || |||||||| ||||    
T  48389031 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaattttacgacttggtgtatcgat 48389130  T
Q  682 acacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||| ||||||||||||||||||||||| ||||||||    
T  48389131 acatccaaatttattgggtgtaccatagaatttgcc 48389166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 580 - 718
Target Start/End: Complemental strand, 346827 - 346689
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    |||||| ||||||||||||||||||||| || |||||||||||||||||||||||       |||||||||||||||||||||||  | || ||||||||    
T  346827 tatatacaatttaattatcttagttgtcgatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttaccacttagtgtaccg 346728  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  346727 atacatccaaatttattgggtgtaccatagaatttgcct 346689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 583 - 717
Target Start/End: Original strand, 50560634 - 50560768
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  50560634 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgata 50560733  T
Q  683 cacccaaatttattgggtgtaccatataatttgcc 717  Q
    || | ||||||||||||| ||||||| || |||||    
T  50560734 catctaaatttattgggtttaccatagaacttgcc 50560768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 580 - 704
Target Start/End: Complemental strand, 53376728 - 53376604
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||| |    
T  53376728 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgaattggtgtactg 53376629  T
Q  680 atacacccaaatttattgggtgtac 704  Q
    ||||| ||||||||||||| |||||    
T  53376628 atacatccaaatttattggatgtac 53376604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 583 - 720
Target Start/End: Original strand, 26409893 - 26410029
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||  ||||| ||||| |||||||||||||||||||||||       ||||| ||||||||||||||| |||| ||||||||||||||    
T  26409893 ataaaatttaattattatagtt-tcaatgatagaaaataattatttttcttcaaaaaaacaactaatttattattaatttaatgaattggtgtaccgata 26409991  T
Q  683 cacccaaatttattgggtgtaccatataatttgccttt 720  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  26409992 cacccaaatttattggatgtaccataaaatttgccttt 26410029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 576 - 688
Target Start/End: Complemental strand, 14460322 - 14460210
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 675  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||| |||||||||||||||| || |||||||    
T  14460322 ttgatatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcttttattattaattttacgacttggtgt 14460223  T
Q  676 accgatacaccca 688  Q
    |||||||||||||    
T  14460222 accgatacaccca 14460210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 583 - 717
Target Start/End: Original strand, 7157311 - 7157445
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || |||||| | | ||     
T  7157311 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgcatcaatg 7157410  T
Q  683 cacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||| ||||||||||||||| ||||||||    
T  7157411 cacccaaattcattgggtgtaccatagaatttgcc 7157445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 576 - 678
Target Start/End: Original strand, 36019682 - 36019784
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 675  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||    
T  36019682 ttgatagataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgt 36019781  T
Q  676 acc 678  Q
    |||    
T  36019782 acc 36019784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 583 - 715
Target Start/End: Complemental strand, 50465606 - 50465473
Alignment:
Q  583 ataaaatttaattatcttagttgtcaa-tcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgat 681  Q
    ||||||||||||||||||||||||||| | || ||||||||||||||||| ||       |||||||||||||||||||||||  | |||||||||||||    
T  50465606 ataaaatttaattatcttagttgtcaaatgatggaaaataattatttttcctcaaaaaaacaactcatttattattaattttacaacttggtgtaccgat 50465507  T
Q  682 acacccaaatttattgggtgtaccatataatttg 715  Q
    ||||||||||||||||  ||||||||| ||||||    
T  50465506 acacccaaatttattgaatgtaccataaaatttg 50465473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 580 - 678
Target Start/End: Complemental strand, 48990449 - 48990351
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtacc 678  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||  | ||||||||||    
T  48990449 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacaacttggtgtacc 48990351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 642 - 719
Target Start/End: Original strand, 52788755 - 52788832
Alignment:
Q  642 caactcatttattattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  52788755 caactcatttattattaattttacgacttggtgtaccgatacacccaaatttattggatgtaccatagaatttgcctt 52788832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 583 - 718
Target Start/End: Original strand, 35320633 - 35320770
Alignment:
Q  583 ataaaatttaattatcttagttgtcaa-tcatagaaaataattatttttctt-cnnnnnnncaactcatttattattaattttatgatttggtgtaccga 680  Q
    |||||||||||||||| |||||||||| | ||||||||||||||||||| || |       ||| |||||||||| |||| ||| || ||||||||||||    
T  35320633 ataaaatttaattatcgtagttgtcaaatgatagaaaataattatttttttttcaaaaaaacaattcatttattactaatattacgacttggtgtaccga 35320732  T
Q  681 tacacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  35320733 tacacccaaatttagtgggtgtaccatagaatttgcct 35320770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 642 - 718
Target Start/End: Complemental strand, 54011217 - 54011141
Alignment:
Q  642 caactcatttattattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  54011217 caactcatttattattaattttacgacttggtgtaccgatacacccaaatttattgggtgtactatagaatttgcct 54011141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 580 - 678
Target Start/End: Complemental strand, 51235658 - 51235558
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttc--nnnnnnncaactcatttattattaattttatgatttggtgtac 677  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||          |||||||||||||||||||||| || |||||||||    
T  51235658 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaaaactcatttattattaattttacgacttggtgtac 51235559  T
Q  678 c 678  Q
    |    
T  51235558 c 51235558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 576 - 718
Target Start/End: Complemental strand, 42622752 - 42622608
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcattta--ttattaattttatgatttggt 673  Q
    |||||| |||| |||||| |||  || ||||||||  ||||||||||||| ||||||||       |||||||||||  |||||||||| | ||||||||    
T  42622752 ttgataaataagatttaaatattataattgtcaatgctagaaaataattaattttcttcagaaaaacaactcatttaatttattaatttaacgatttggt 42622653  T
Q  674 gtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||| | ||||| ||| ||| |||||||||||||| |||||||||    
T  42622652 gtactggtacactcaatttttttgggtgtaccatagaatttgcct 42622608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 583 - 634
Target Start/End: Complemental strand, 7347224 - 7347173
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttc 634  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  7347224 ataaaatttaattatcttagttgtcaatgatagaaagtaattatttttcttc 7347173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 576 - 633
Target Start/End: Complemental strand, 881865 - 881808
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttctt 633  Q
    |||||| |||||||||||||||  ||||||||||| ||||||||||||||||||||||    
T  881865 ttgataaataaaatttaattattatagttgtcaatgatagaaaataattatttttctt 881808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 583 - 725
Target Start/End: Original strand, 23043625 - 23043766
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||   |       ||||||||||||||||||| | |  | ||| |||||| |||    
T  23043625 ataaaatttaattattatagttgtcaatgatagaaaataattattttt-gacaaaaaaacaactcatttattattaatgtaacaacttgatgtaccaata 23043723  T
Q  683 cacccaaatttattgggtgtaccatataatttgcctttaataa 725  Q
    || | ||||||||||   ||||||||||||||||||| |||||    
T  23043724 catcaaaatttattgaaagtaccatataatttgccttaaataa 23043766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 642 - 718
Target Start/End: Original strand, 26885302 - 26885379
Alignment:
Q  642 caactcatttat-tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||||||||  ||||||||| | || ||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  26885302 caactcatttaactattaatttaaagaattggtgtaccgatacactcaaatatattgggtgtaccataaaatttgcct 26885379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 654 - 717
Target Start/End: Original strand, 38785426 - 38785488
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||| | ||||||||||||| |||||| |||||| ||||||||||||||||||||||||    
T  38785426 tattaatttaaggatttggtgtaccaatacactcaaatt-attgggtgtaccatataatttgcc 38785488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 654 - 718
Target Start/End: Complemental strand, 11140309 - 11140246
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||| | ||||||||||||| |||||| |||||| ||||||||||||||| |||||||||    
T  11140309 tattaatttaaggatttggtgtaccaatacactcaaatt-attgggtgtaccatagaatttgcct 11140246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 643 - 714
Target Start/End: Complemental strand, 31479630 - 31479559
Alignment:
Q  643 aactcattta-ttattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataattt 714  Q
    |||||||||| |||||||||| |  ||||||||||||||||||| ||||||| || |||||||||||||||||    
T  31479630 aactcatttaattattaatttaacaatttggtgtaccgatacactcaaattt-ttaggtgtaccatataattt 31479559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 654 - 717
Target Start/End: Original strand, 42364271 - 42364333
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||| | ||||||||||||| |||||| |||| ||||||||||||||||| ||||||||    
T  42364271 tattaatttaaggatttggtgtaccaatacactcaaa-ttattgggtgtaccatagaatttgcc 42364333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 654 - 720
Target Start/End: Original strand, 876566 - 876631
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 720  Q
    ||||||||| | ||||||||||||| ||||||  |||||  ||||||||||||||||||||||||||    
T  876566 tattaatttaaggatttggtgtaccaatacacttaaattg-ttgggtgtaccatataatttgccttt 876631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 642 - 718
Target Start/End: Complemental strand, 9506979 - 9506902
Alignment:
Q  642 caactcatttat-tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||||||||  ||||||||| | || ||||||||||||| ||| ||||| ||||||||||| |||| |||||||||    
T  9506979 caactcatttaactattaatttaaagaattggtgtaccgatgcactcaaatatattgggtgtatcatagaatttgcct 9506902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 642 - 718
Target Start/End: Complemental strand, 9514954 - 9514877
Alignment:
Q  642 caactcatttat-tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||||||||  ||||||||| | || ||||||||||||| ||| ||||| ||||||||||| |||| |||||||||    
T  9514954 caactcatttaactattaatttaaagaattggtgtaccgatgcactcaaatatattgggtgtatcatagaatttgcct 9514877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 642 - 718
Target Start/End: Original strand, 25482574 - 25482651
Alignment:
Q  642 caactcatttat-tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||||||||  ||||||||| | || | ||||||||||||||| ||||| |||| |||||||| ||||||||||||    
T  25482574 caactcatttaactattaatttaaagaataggtgtaccgatacactcaaatatattaggtgtaccttataatttgcct 25482651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 654 - 719
Target Start/End: Complemental strand, 29491726 - 29491661
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||||| | || | ||||||||| ||||| ||||| |||||||||||||||| ||||||||||    
T  29491726 tattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcctt 29491661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 654 - 719
Target Start/End: Original strand, 42622193 - 42622258
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||||| | || | ||||||||| ||||| ||||| |||||||||||||||| ||||||||||    
T  42622193 tattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccataaaatttgcctt 42622258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 654 - 718
Target Start/End: Complemental strand, 42067641 - 42067578
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||||||||||||| |||||||||    
T  42067641 tattaatttaaggatttggtgtaccaatacactcaaa-ttgttgggtgtaccatagaatttgcct 42067578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 665 - 717
Target Start/End: Original strand, 43715103 - 43715154
Alignment:
Q  665 tgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||||||| |||||||||||||| |||| ||||||||| ||||||||    
T  43715103 tgatttggtgtaccaatacacccaaattt-ttggatgtaccatagaatttgcc 43715154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 652 - 720
Target Start/End: Original strand, 52776795 - 52776862
Alignment:
Q  652 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 720  Q
    ||||||||||| || ||||||||||||| ||||| |||| ||||||||||||| ||| ||||| |||||    
T  52776795 attattaatttaataatttggtgtaccggtacactcaaa-ttattgggtgtacgatagaattttccttt 52776862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 666 - 717
Target Start/End: Original strand, 14998506 - 14998556
Alignment:
Q  666 gatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||||||| ||||| ||||||| |||||||||||||| ||||||||    
T  14998506 gatttggtgtaccggtacactcaaattt-ttgggtgtaccataaaatttgcc 14998556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 717
Target Start/End: Complemental strand, 19547551 - 19547489
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||  ||||| ||||||||||||||| ||||||| |||| ||||||||| ||||||||    
T  19547551 tattaatttgttgattgggtgtaccgatacactcaaattt-ttggatgtaccatagaatttgcc 19547489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 717
Target Start/End: Original strand, 25592350 - 25592412
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||  |||||||||||| | |||||| ||||||| |||| ||||||||||||||||||    
T  25592350 tattaatttattgatttggtgtatcaatacactcaaattt-ttggatgtaccatataatttgcc 25592412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 672 - 726
Target Start/End: Original strand, 7352529 - 7352583
Alignment:
Q  672 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcctttaataat 726  Q
    |||||||||||||| ||||| || ||| ||||||||| |||||||||| ||||||    
T  7352529 gtgtaccgatacactcaaatatagtggatgtaccatagaatttgccttaaataat 7352583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 576 - 630
Target Start/End: Complemental strand, 20199487 - 20199433
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattattttt 630  Q
    |||||| |||| ||||||||||  || |||||||| |||||||||||||||||||    
T  20199487 ttgataaataagatttaattattataattgtcaatgatagaaaataattattttt 20199433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 654 - 720
Target Start/End: Original strand, 29347604 - 29347669
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 720  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||||||||||||| ||||| |||||    
T  29347604 tattaatttaaagatttggtgtaccaatacactcaaa-ttgttgggtgtaccatagaatttaccttt 29347669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 576 - 630
Target Start/End: Complemental strand, 47175607 - 47175553
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattattttt 630  Q
    |||||| |||| ||||||||||  || |||||||| |||||||||||||||||||    
T  47175607 ttgataaataagatttaattattataattgtcaatgatagaaaataattattttt 47175553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 668 - 717
Target Start/End: Complemental strand, 23795837 - 23795788
Alignment:
Q  668 tttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||||||||||| ||||| |||| ||||||| ||| ||||||||    
T  23795837 tttggtgtaccgatacactcaaatatattaggtgtacgataaaatttgcc 23795788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 671 - 716
Target Start/End: Complemental strand, 24170001 - 24169956
Alignment:
Q  671 ggtgtaccgatacacccaaatttattgggtgtaccatataatttgc 716  Q
    ||||||||||||||| ||||| || ||||||||||||| |||||||    
T  24170001 ggtgtaccgatacactcaaatatactgggtgtaccataaaatttgc 24169956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 672 - 717
Target Start/End: Complemental strand, 26849969 - 26849924
Alignment:
Q  672 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||||||| ||||| || ||||||||||||| ||||||||    
T  26849969 gtgtaccgatacactcaaatataatgggtgtaccatagaatttgcc 26849924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 715
Target Start/End: Complemental strand, 40477820 - 40477759
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 715  Q
    ||||||||| | || | ||||||||| ||||| ||||| |||||||||||||||| ||||||    
T  40477820 tattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttg 40477759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 672 - 717
Target Start/End: Complemental strand, 46671382 - 46671337
Alignment:
Q  672 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||| ||||| ||||| ||||||||||||| |||||||||||    
T  46671382 gtgtaccggtacactcaaatatattgggtgtaccgtataatttgcc 46671337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 1e-49; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 580 - 717
Target Start/End: Original strand, 28897173 - 28897310
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||||| ||||||||||     
T  28897173 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttatgacttggtgtacca 28897272  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  28897273 atacacccaaatttattgggtgtaccatagaatttgcc 28897310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 580 - 719
Target Start/End: Original strand, 45393716 - 45393855
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||  | |||||||||||    
T  45393716 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacaacttggtgtaccg 45393815  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||| ||||||||||||| ||||||||| ||||||||||    
T  45393816 atacatccaaatttattggatgtaccatagaatttgcctt 45393855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 580 - 714
Target Start/End: Original strand, 37766572 - 37766706
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||| |||||    
T  37766572 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtataccg 37766671  T
Q  680 atacacccaaatttattgggtgtaccatataattt 714  Q
    ||||| ||||||||||| ||||||||||| |||||    
T  37766672 atacatccaaatttattaggtgtaccatagaattt 37766706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 582 - 718
Target Start/End: Complemental strand, 21835566 - 21835430
Alignment:
Q  582 tataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgat 681  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||        |||||||||||||||||||||| || |||||||||||||    
T  21835566 tataaaatttaattatcttagttgccaatgatagaaaataattatttttcttcaaaaaaataactcatttattattaattttacgacttggtgtaccgat 21835467  T
Q  682 acacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||| |||||||||||||||||| |||| |||||||||    
T  21835466 acagccaaatttattgggtgtaacatagaatttgcct 21835430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 583 - 718
Target Start/End: Original strand, 37404875 - 37405010
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        ||||||||||||||||||||||||| ||||||||||||||    
T  37404875 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaagaactcatttattattaattttatgacttggtgtaccgata 37404974  T
Q  683 cacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||||||||||| | | || |||| |||||||||    
T  37404975 cacccaaatttattagatatatcatagaatttgcct 37405010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 583 - 717
Target Start/End: Original strand, 1426601 - 1426735
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| || ||||||||||||||    
T  1426601 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaactcatttattattaattttacgacttggtgtaccgata 1426700  T
Q  683 cacccaaatttattgggtgtaccatataatttgcc 717  Q
     || |||||||||||||| ||||||| ||||||||    
T  1426701 tactcaaatttattgggtctaccatacaatttgcc 1426735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 576 - 714
Target Start/End: Complemental strand, 36835483 - 36835345
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 675  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||| |||||||||||||| || || |||||||    
T  36835483 ttgataaataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaacttatttattattaattgtacgacttggtgt 36835384  T
Q  676 accgatacacccaaatttattgggtgtaccatataattt 714  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  36835383 accgatacacccaaatttatttggtgtaccatagaattt 36835345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 583 - 715
Target Start/End: Complemental strand, 464383 - 464250
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaa-ctcatttattattaattttatgatttggtgtaccgat 681  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        || |||||||||||||||||||| || || ||||||||||    
T  464383 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaaactcatttattattaattttacgagttagtgtaccgat 464284  T
Q  682 acacccaaatttattgggtgtaccatataatttg 715  Q
    ||||||||||||||||||||||||||| ||||||    
T  464283 acacccaaatttattgggtgtaccatagaatttg 464250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 583 - 715
Target Start/End: Original strand, 12266349 - 12266481
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||| ||||||||||    
T  12266349 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttgatgtaccgata 12266448  T
Q  683 cacccaaatttattgggtgtaccatataatttg 715  Q
    |||||||||| | ||||||||||||| ||||||    
T  12266449 cacccaaattcaatgggtgtaccatagaatttg 12266481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 580 - 719
Target Start/End: Complemental strand, 45401285 - 45401146
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||  | ||| |||||||    
T  45401285 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacaacttgatgtaccg 45401186  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||| ||||||||||| | ||||||||| ||||| ||||    
T  45401185 atacatccaaatttattagatgtaccatagaatttacctt 45401146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 583 - 717
Target Start/End: Original strand, 196338 - 196471
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||        ||||||||||||||||||||||| || ||||||||||||||    
T  196338 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttctt-aaaaaaacaactcatttattattaattttacgacttggtgtaccgata 196436  T
Q  683 cacccaaatttattgggtgtaccatataatttgcc 717  Q
     ||| ||||||||||  ||||||||| ||||||||    
T  196437 aacctaaatttattgaatgtaccatagaatttgcc 196471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 583 - 717
Target Start/End: Original strand, 311175 - 311308
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||        ||||||||||||||||||||||| || ||||||||||||||    
T  311175 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttctt-aaaaaaacaactcatttattattaattttacgacttggtgtaccgata 311273  T
Q  683 cacccaaatttattgggtgtaccatataatttgcc 717  Q
     ||| ||||||||||  ||||||||| ||||||||    
T  311274 aacctaaatttattgaatgtaccatagaatttgcc 311308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 583 - 717
Target Start/End: Original strand, 29039885 - 29040019
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||  ||||||||||| ||||||||||| |||||||||||       ||||| ||||||||||||||| |||| ||||||||||||||    
T  29039885 ataaaatttaattattatagttgtcaatgatagaaaataaatatttttcttcaaaaaaacaactaatttattattaatttaatgaattggtgtaccgata 29039984  T
Q  683 cacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||||||| | ||||||||| ||||||||    
T  29039985 cacccaaatttatttgatgtaccatagaatttgcc 29040019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 580 - 727
Target Start/End: Complemental strand, 38971601 - 38971453
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||       ||||||||||||||||||  ||| || | |||||||||    
T  38971601 tatataaaatttaattattttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaaacttacgactaggtgtaccg 38971502  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcct-ttaataata 727  Q
    ||||| ||||||||||||| |||| | || ||||||||| |||||||||    
T  38971501 atacaaccaaatttattggatgtatcgtagaatttgcctcttaataata 38971453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 580 - 727
Target Start/End: Complemental strand, 39002699 - 39002551
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||       ||||||||||||||||||  ||| || | |||||||||    
T  39002699 tatataaaatttaattattttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaaacttacgactaggtgtaccg 39002600  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcct-ttaataata 727  Q
    ||||| ||||||||||||| |||| | || ||||||||| |||||||||    
T  39002599 atacaaccaaatttattggatgtatcgtagaatttgcctcttaataata 39002551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 580 - 689
Target Start/End: Complemental strand, 7223620 - 7223511
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  7223620 tatataaaatttaattattttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 7223521  T
Q  680 atacacccaa 689  Q
    ||||| ||||    
T  7223520 atacatccaa 7223511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 576 - 717
Target Start/End: Complemental strand, 38803575 - 38803434
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 675  Q
    |||||| |||||||||||||||  ||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| || ||||||     
T  38803575 ttgataaataaaatttaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaataactcatttattattaattttacgacttggtgc 38803476  T
Q  676 accgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||| ||||||||||| |||||||  || ||||||||    
T  38803475 accgatacatccaaatttattaggtgtacagtagaatttgcc 38803434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 583 - 721
Target Start/End: Original strand, 27101084 - 27101223
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtaccgat 681  Q
    ||||||||||||||   ||||||||||| |||||||||||||||||||||||        ||||||||||||||||||||| | || |||||||||||||    
T  27101084 ataaaatttaattactatagttgtcaatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaatttaacgacttggtgtaccgat 27101183  T
Q  682 acacccaaatttattgggtgtaccatataatttgccttta 721  Q
    ||||| ||||||||||| ||||||||| || |||||||||    
T  27101184 acacctaaatttattggatgtaccatagaaattgccttta 27101223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 580 - 695
Target Start/End: Original strand, 43182995 - 43183109
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||        ||||||||||||||||||||||| || |||||||||||    
T  43182995 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttctt-aaaaaaacaactcatttattattaattttacgacttggtgtaccg 43183093  T
Q  680 atacacccaaatttat 695  Q
    |||||  |||||||||    
T  43183094 atacattcaaatttat 43183109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 580 - 678
Target Start/End: Complemental strand, 38627124 - 38627026
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtacc 678  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||    
T  38627124 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtacc 38627026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 583 - 717
Target Start/End: Complemental strand, 3052933 - 3052799
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    ||||| |||||||||  ||||||||||| |||||||||||||||||||||||        |||| ||||||||||||||| | || ||||||||||||||    
T  3052933 ataaagtttaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaataactaatttattattaatttaacgaattggtgtaccgata 3052834  T
Q  683 cacccaaatttattgggtgtaccatataatttgcc 717  Q
    || ||||||||||||| | ||||||| ||||||||    
T  3052833 catccaaatttattggatataccatagaatttgcc 3052799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 648 - 717
Target Start/End: Original strand, 29565687 - 29565756
Alignment:
Q  648 atttattattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29565687 atttattattaattttacgacttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 29565756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 583 - 715
Target Start/End: Original strand, 41571982 - 41572113
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||  || |||||||| |||||||||||||||| ||||||       ||||| ||||||||||||||| |  | || |||||||||||    
T  41571982 ataaaatttaattattataattgtcaatgatagaaaataattattcttcttcaaaaaa-caactaatttattattaatttaacaaattagtgtaccgata 41572080  T
Q  683 cacccaaatttattgggtgtaccatataatttg 715  Q
     | ||||||||||||||||||||||||||||||    
T  41572081 tatccaaatttattgggtgtaccatataatttg 41572113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 651 - 722
Target Start/End: Original strand, 14914154 - 14914225
Alignment:
Q  651 tattattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctttaa 722  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  14914154 tattattaattttacgacttggtgtaccgatacacccaaatttattggatgtaccatagaatttgccattaa 14914225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 583 - 694
Target Start/End: Original strand, 18844432 - 18844543
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    ||||||||||||||   ||||||||||| ||| |||||||||||||||||||       ||||||||||||||||||||| | || ||||||||||||||    
T  18844432 ataaaatttaattactatagttgtcaatgataaaaaataattatttttcttcaaaaaatcaactcatttattattaatttaacgacttggtgtaccgata 18844531  T
Q  683 cacccaaattta 694  Q
    |||  |||||||    
T  18844532 cacataaattta 18844543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 580 - 621
Target Start/End: Original strand, 14914114 - 14914155
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaata 621  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  14914114 tatataaaatttaattatcttagttgtcaatgatagaaaata 14914155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 672 - 720
Target Start/End: Original strand, 26988749 - 26988797
Alignment:
Q  672 gtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 720  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| ||||    
T  26988749 gtgtaccgatacactcaaatatattgggtgtaccatataatttgtcttt 26988797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 652 - 718
Target Start/End: Original strand, 19718693 - 19718758
Alignment:
Q  652 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||||| ||||||||||||||  |||||| ||||||| |||| ||||||||| |||||||||    
T  19718693 attattaatttaatgatttggtgtactaatacactcaaattt-ttggatgtaccatagaatttgcct 19718758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 654 - 715
Target Start/End: Complemental strand, 1043121 - 1043060
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 715  Q
    ||||||||| | || | ||||||||||||||| ||||| |||||||||||||||| ||||||    
T  1043121 tattaatttaaagagtgggtgtaccgatacactcaaatatattgggtgtaccatagaatttg 1043060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 666 - 718
Target Start/End: Complemental strand, 12801157 - 12801106
Alignment:
Q  666 gatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||||||||||| ||||| ||||||| |||||||||||||| |||||||||    
T  12801157 gatttggtgtaccggtacactcaaattt-ttgggtgtaccatagaatttgcct 12801106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 654 - 718
Target Start/End: Original strand, 15726234 - 15726297
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||| | ||||||||||||| |||||| |||| ||||||| ||||||||| |||||||||    
T  15726234 tattaatttaaggatttggtgtaccaatacactcaaa-ttattggatgtaccatagaatttgcct 15726297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 654 - 718
Target Start/End: Original strand, 29454553 - 29454617
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||| | || | ||||||||| ||||| ||||| |||||||||||||||| |||||||||    
T  29454553 tattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcct 29454617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 654 - 718
Target Start/End: Complemental strand, 29773507 - 29773444
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||||||||||||| |||||||||    
T  29773507 tattaatttaaggatttggtgtaccaatacactcaaa-ttgttgggtgtaccatagaatttgcct 29773444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 717
Target Start/End: Complemental strand, 2273072 - 2273010
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||| ||||||||||||||| |||||| || || | |||||||||||||| ||||||||    
T  2273072 tattaatttaatgatttggtgtaccaatacactcatatct-ttgggtgtaccatagaatttgcc 2273010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 634
Target Start/End: Original strand, 5982459 - 5982510
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttc 634  Q
    |||| ||||||||||  || |||||||| |||||||||||||||||||||||    
T  5982459 ataagatttaattattataattgtcaatgatagaaaataattatttttcttc 5982510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 717
Target Start/End: Complemental strand, 28090254 - 28090192
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||| | ||||||||||||| ||| || |||||| ||||||||||||||| ||||||||    
T  28090254 tattaatttaaggatttggtgtaccaatatactcaaatt-attgggtgtaccatagaatttgcc 28090192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 630
Target Start/End: Original strand, 34058103 - 34058150
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 630  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  34058103 ataagatttaattattatagttgtcaatgatagaaaataattattttt 34058150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 672 - 727
Target Start/End: Original strand, 37676299 - 37676354
Alignment:
Q  672 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcctttaataata 727  Q
    |||||||| ||||| ||||| || ||||||||||||| ||||||||||| ||||||    
T  37676299 gtgtaccggtacactcaaatatagtgggtgtaccatagaatttgccttttataata 37676354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 652 - 719
Target Start/End: Complemental strand, 40154552 - 40154487
Alignment:
Q  652 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||||||| ||| |||||||||||||||||| |||| |  |||||||||||||| ||||||||||    
T  40154552 attattaatttaatg-tttggtgtaccgatacactcaaaatg-ttgggtgtaccataaaatttgcctt 40154487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 630
Target Start/End: Complemental strand, 43331877 - 43331830
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 630  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  43331877 ataagatttaattattatagttgtcaatgatagaaaataattattttt 43331830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 583 - 630
Target Start/End: Complemental strand, 44309699 - 44309652
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 630  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  44309699 ataagatttaattattatagttgtcaatgatagaaaataattattttt 44309652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 654 - 720
Target Start/End: Complemental strand, 16323621 - 16323556
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 720  Q
    |||||||||  |||||||||||||| |||||| ||||| | ||||||||| |||| |||||||||||    
T  16323621 tattaatttattgatttggtgtaccaatacactcaaatct-ttgggtgtatcatagaatttgccttt 16323556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 652 - 718
Target Start/End: Original strand, 17096624 - 17096688
Alignment:
Q  652 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    ||||||||||| ||| |||||||||||||||||| |||| |  |||||||||||||| |||||||||    
T  17096624 attattaatttaatg-tttggtgtaccgatacactcaaaatg-ttgggtgtaccatagaatttgcct 17096688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 672 - 718
Target Start/End: Original strand, 26522328 - 26522374
Alignment:
Q  672 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||||| ||||| ||||| || |||||||||||||||||||||||    
T  26522328 gtgtaccggtacactcaaatatagtgggtgtaccatataatttgcct 26522374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 655 - 717
Target Start/End: Original strand, 34047762 - 34047823
Alignment:
Q  655 attaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||| || ||||||||||||| ||||| |||| || |||||||||||||| ||||||||    
T  34047762 attaatttaataatttggtgtaccggtacactcaaa-ttgttgggtgtaccatagaatttgcc 34047823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 576 - 630
Target Start/End: Complemental strand, 41674624 - 41674570
Alignment:
Q  576 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattattttt 630  Q
    |||||| |||| ||||||||||  || |||||||| |||||||||||||||||||    
T  41674624 ttgataaataagatttaattattataattgtcaatgatagaaaataattattttt 41674570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 655 - 717
Target Start/End: Complemental strand, 43049598 - 43049537
Alignment:
Q  655 attaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||| ||||||||||||||| |||||  ||||||| |||| ||||||||| ||||||||    
T  43049598 attaatttaatgatttggtgtaccaatacattcaaattt-ttggatgtaccatagaatttgcc 43049537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 717
Target Start/End: Complemental strand, 2261094 - 2261029
Alignment:
Q  652 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||||| | || | ||||||||| ||||| ||||| ||||| |||||||||| ||||||||    
T  2261094 attattaatttaaagagtgggtgtaccggtacactcaaatatattgagtgtaccatagaatttgcc 2261029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 717
Target Start/End: Original strand, 5215663 - 5215727
Alignment:
Q  652 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||||| ||| ||| |||||||||||||| ||||  ||||| |||||||||| ||||||||    
T  5215663 attattaatttaatgtttttgtgtaccgatacactcaaa-atattgagtgtaccataaaatttgcc 5215727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 719
Target Start/End: Original strand, 6631249 - 6631314
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||||| | || | ||| ||||| ||||| ||||| |||||||||||||||| ||||||||||    
T  6631249 tattaatttaaagaatgggtataccggtacactcaaatatattgggtgtaccatagaatttgcctt 6631314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 719
Target Start/End: Original strand, 6800116 - 6800180
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||||  ||||||||||||||| |||||| ||||| | ||| |||||||||| ||||||||||    
T  6800116 tattaattcaatgatttggtgtaccaatacactcaaatct-ttgagtgtaccataaaatttgcctt 6800180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 719
Target Start/End: Complemental strand, 17642136 - 17642072
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||||| ||||||||||||||| |||||| || || | |||| ||||||||| ||||||||||    
T  17642136 tattaatttaatgatttggtgtaccaatacactcatatct-ttggatgtaccatagaatttgcctt 17642072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 719
Target Start/End: Complemental strand, 23286627 - 23286563
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||||| | ||||||||||||| |||||| |||| || || ||||||||||| ||||||||||    
T  23286627 tattaatttaaggatttggtgtaccaatacacgcaaa-ttgttaggtgtaccatagaatttgcctt 23286563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 717
Target Start/End: Original strand, 32071586 - 32071650
Alignment:
Q  652 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||||| | ||||| |||||||||| ||| ||||||| || ||||||||||| ||||||||    
T  32071586 attattaatttaacgatttcgtgtaccgattcactcaaattt-ttcggtgtaccataaaatttgcc 32071650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 719
Target Start/End: Complemental strand, 37511150 - 37511086
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||||||||||||  ||||||||||    
T  37511150 tattaatttaaagatttggtgtaccaatacactcaaa-ttgttgggtgtaccatcgaatttgcctt 37511086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 96; Significance: 1e-46; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 580 - 720
Target Start/End: Original strand, 166687 - 166827
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  166687 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 166786  T
Q  680 atacacccaaatttattgggtgtaccatataatttgccttt 720  Q
    ||||||||||||||||||  ||||||||| |||||||||||    
T  166787 atacacccaaatttattgaatgtaccatagaatttgccttt 166827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 91; Significance: 1e-43; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 583 - 718
Target Start/End: Complemental strand, 13737 - 13602
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  13737 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 13638  T
Q  683 cacccaaatttattgggtgtaccatataatttgcct 718  Q
    |||||||||| ||||||||||||||| |||||||||    
T  13637 cacccaaattcattgggtgtaccatagaatttgcct 13602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1999 (Bit Score: 89; Significance: 2e-42; HSPs: 1)
Name: scaffold1999
Description:

Target: scaffold1999; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 580 - 717
Target Start/End: Complemental strand, 1140 - 1003
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||| ||||||    
T  1140 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggagtaccg 1041  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||||||||||| | ||||||||| ||||||||    
T  1040 atacacccaaatttattagatgtaccataaaatttgcc 1003  T

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Target: scaffold0239 (Bit Score: 88; Significance: 8e-42; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 585 - 717
Target Start/End: Complemental strand, 15512 - 15380
Alignment:
Q  585 aaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgataca 684  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||        |||||||||||||||||||||| || ||||||||||||||||    
T  15512 aaaatttaattatcttagttgtcaatgatagaaaataattattttttttcaaaaaaataactcatttattattaattttacgacttggtgtaccgataca 15413  T
Q  685 cccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||||||||||||||||| ||||||||    
T  15412 cccaaatttattgggtgtaccatagaatttgcc 15380  T

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Target: scaffold0493 (Bit Score: 82; Significance: 3e-38; HSPs: 1)
Name: scaffold0493
Description:

Target: scaffold0493; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 580 - 719
Target Start/End: Complemental strand, 1519 - 1379
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaa--ttttatgatttggtgtac 677  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||        |||||||||||||||| |  |||||||| |||||||||    
T  1519 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttctt-aaaaaaacaactcatttattatttaatttttatgacttggtgtac 1421  T
Q  678 cgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    | ||||||||||||||||||||||||||||| ||||||||||    
T  1420 caatacacccaaatttattgggtgtaccatagaatttgcctt 1379  T

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Target: scaffold0005 (Bit Score: 81; Significance: 1e-37; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 580 - 717
Target Start/End: Complemental strand, 291760 - 291623
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||         | | ||||||||||||||||| ||||||||||||||    
T  291760 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaattatttatttattattaattttacgatttggtgtaccg 291661  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||||||||||||||  ||||||||| ||||||||    
T  291660 atacacccaaatttattgaatgtaccatagaatttgcc 291623  T

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Target: scaffold0194 (Bit Score: 77; Significance: 3e-35; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 580 - 717
Target Start/End: Original strand, 17764 - 17900
Alignment:
Q  580 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 679  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| | ||       ||||||||||||||||||||||| || ||||||||||     
T  17764 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttt-catcaaaaaaacaactcatttattattaattttacgacttggtgtacca 17862  T
Q  680 atacacccaaatttattgggtgtaccatataatttgcc 717  Q
    ||||||| ||||||||||| ||||||||| ||||||||    
T  17863 atacacctaaatttattggatgtaccatagaatttgcc 17900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 67; Significance: 3e-29; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 583 - 690
Target Start/End: Original strand, 8699 - 8806
Alignment:
Q  583 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 682  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  8699 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 8798  T
Q  683 cacccaaa 690  Q
    ||| ||||    
T  8799 cactcaaa 8806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 62; Significance: 3e-26; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 642 - 715
Target Start/End: Original strand, 26974 - 27047
Alignment:
Q  642 caactcatttattattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 715  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||    
T  26974 caactcatttattattaattttacgacttggtgtaccgatacacccaaatttattgggtgtaccatagaatttg 27047  T

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Target: scaffold0301 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 612 - 718
Target Start/End: Complemental strand, 21563 - 21459
Alignment:
Q  612 atagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataa 711  Q
    |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| |||| ||    
T  21563 atagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacaccc-aatttattgggtgta-catagaa 21466  T
Q  712 tttgcct 718  Q
    |||||||    
T  21465 tttgcct 21459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 672 - 717
Target Start/End: Original strand, 16944 - 16989
Alignment:
Q  672 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||    
T  16944 gtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 16989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 672 - 717
Target Start/End: Complemental strand, 55900 - 55855
Alignment:
Q  672 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||    
T  55900 gtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 55855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0625 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 717
Target Start/End: Original strand, 6607 - 6669
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 717  Q
    |||||||||  |||||||||||||| |||||| ||||||| || ||||||||||| ||||||||    
T  6607 tattaatttattgatttggtgtaccaatacactcaaattt-tttggtgtaccatagaatttgcc 6669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1844 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold1844
Description:

Target: scaffold1844; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 658 - 719
Target Start/End: Complemental strand, 1174 - 1114
Alignment:
Q  658 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 719  Q
    ||||| |||||||||||||||| ||||| ||||||| ||  |||||||||| ||||||||||    
T  1174 aatttgatgatttggtgtaccggtacactcaaattt-ttaagtgtaccatagaatttgcctt 1114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 723
Target Start/End: Original strand, 3373 - 3442
Alignment:
Q  654 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctttaat 723  Q
    ||||||||| | || | ||||||| | ||||| ||||| |||||||||||||||| |||||||| |||||    
T  3373 tattaatttaaagagtaggtgtactggtacactcaaatatattgggtgtaccatagaatttgcccttaat 3442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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