View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3485_low_2 (Length: 767)

Name: NF3485_low_2
Description: NF3485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3485_low_2
NF3485_low_2
[»] chr2 (47 HSPs)
chr2 (13-277)||(31658583-31658847)
chr2 (449-587)||(40533250-40533388)
chr2 (445-587)||(2317104-2317246)
chr2 (449-587)||(37725550-37725688)
chr2 (449-586)||(36947752-36947889)
chr2 (449-586)||(490004-490140)
chr2 (452-588)||(1859925-1860061)
chr2 (452-588)||(45555380-45555516)
chr2 (449-588)||(13568482-13568621)
chr2 (449-586)||(3724211-3724348)
chr2 (449-586)||(35292510-35292646)
chr2 (452-587)||(6657442-6657577)
chr2 (452-587)||(18009227-18009362)
chr2 (452-589)||(7504296-7504434)
chr2 (452-586)||(41839654-41839788)
chr2 (449-586)||(10711277-10711414)
chr2 (449-585)||(16815120-16815256)
chr2 (449-566)||(36192240-36192357)
chr2 (452-588)||(39879192-39879328)
chr2 (445-584)||(5085105-5085243)
chr2 (452-586)||(21836336-21836473)
chr2 (452-588)||(21425210-21425346)
chr2 (452-588)||(26738030-26738166)
chr2 (452-583)||(33424005-33424137)
chr2 (452-569)||(28394085-28394204)
chr2 (452-588)||(33716567-33716703)
chr2 (449-587)||(18576570-18576719)
chr2 (445-583)||(44068052-44068189)
chr2 (511-585)||(16854339-16854413)
chr2 (452-586)||(14819916-14820050)
chr2 (379-444)||(31658493-31658558)
chr2 (10-197)||(31650366-31650553)
chr2 (708-753)||(31658358-31658403)
chr2 (452-586)||(36049737-36049873)
chr2 (523-586)||(39620191-39620254)
chr2 (676-709)||(31658230-31658263)
chr2 (521-589)||(11088213-11088280)
chr2 (523-586)||(11227627-11227689)
chr2 (527-586)||(15362817-15362875)
chr2 (627-662)||(31658304-31658339)
chr2 (527-586)||(41555773-41555831)
chr2 (475-589)||(42641146-42641260)
chr2 (540-586)||(45157530-45157576)
chr2 (523-588)||(58918-58982)
chr2 (541-586)||(1580603-1580648)
chr2 (523-584)||(6884161-6884221)
chr2 (522-587)||(15176341-15176405)
[»] chr6 (26 HSPs)
chr6 (449-590)||(32519002-32519143)
chr6 (449-584)||(16989382-16989517)
chr6 (445-589)||(18870919-18871064)
chr6 (449-585)||(35225100-35225236)
chr6 (449-588)||(26810775-26810914)
chr6 (445-586)||(1338853-1338995)
chr6 (452-587)||(9226199-9226334)
chr6 (449-587)||(6016074-6016212)
chr6 (449-558)||(33954480-33954588)
chr6 (452-559)||(27719277-27719384)
chr6 (452-586)||(24025531-24025665)
chr6 (452-587)||(34315397-34315530)
chr6 (452-547)||(34969491-34969586)
chr6 (452-555)||(29639007-29639110)
chr6 (472-588)||(21181137-21181253)
chr6 (445-583)||(6974965-6975103)
chr6 (527-587)||(1705605-1705664)
chr6 (523-587)||(32834118-32834181)
chr6 (541-586)||(8549916-8549961)
chr6 (511-586)||(9661752-9661828)
chr6 (472-586)||(7344607-7344722)
chr6 (452-499)||(11273689-11273736)
chr6 (452-499)||(14715539-14715586)
chr6 (452-499)||(24151398-24151445)
chr6 (527-586)||(24248804-24248862)
chr6 (534-587)||(15383559-15383611)
[»] chr1 (74 HSPs)
chr1 (445-586)||(43224911-43225052)
chr1 (449-587)||(7426930-7427068)
chr1 (449-589)||(14190887-14191027)
chr1 (449-588)||(3150455-3150594)
chr1 (452-591)||(17376350-17376489)
chr1 (452-587)||(25493497-25493632)
chr1 (448-587)||(46872368-46872507)
chr1 (452-584)||(8569249-8569381)
chr1 (445-577)||(52273985-52274117)
chr1 (452-586)||(9223127-9223262)
chr1 (449-588)||(33829135-33829274)
chr1 (449-588)||(33838692-33838831)
chr1 (452-586)||(27801810-27801944)
chr1 (449-586)||(10061157-10061294)
chr1 (449-584)||(39852959-39853094)
chr1 (452-587)||(48480849-48480984)
chr1 (452-586)||(29171165-29171299)
chr1 (449-583)||(44647515-44647649)
chr1 (445-584)||(47860992-47861131)
chr1 (452-586)||(5057199-5057333)
chr1 (452-586)||(24248075-24248209)
chr1 (449-586)||(27038543-27038680)
chr1 (449-587)||(37765523-37765662)
chr1 (452-587)||(40850022-40850155)
chr1 (452-586)||(48868336-48868470)
chr1 (452-588)||(9260089-9260225)
chr1 (452-583)||(41321008-41321139)
chr1 (452-586)||(33234327-33234461)
chr1 (452-587)||(50502617-50502756)
chr1 (452-586)||(2684011-2684144)
chr1 (452-588)||(28095021-28095156)
chr1 (449-563)||(31571239-31571353)
chr1 (452-584)||(10635669-10635802)
chr1 (452-586)||(14131627-14131756)
chr1 (452-588)||(49739141-49739277)
chr1 (452-585)||(20280223-20280355)
chr1 (452-584)||(22821249-22821382)
chr1 (449-587)||(52079440-52079580)
chr1 (472-587)||(1658833-1658948)
chr1 (452-534)||(31016140-31016222)
chr1 (526-587)||(49685984-49686045)
chr1 (452-565)||(41550419-41550532)
chr1 (521-589)||(34256450-34256517)
chr1 (512-586)||(31075942-31076017)
chr1 (452-502)||(33771917-33771967)
chr1 (453-531)||(41757137-41757215)
chr1 (523-587)||(9166872-9166935)
chr1 (527-585)||(38207879-38207936)
chr1 (541-586)||(477796-477841)
chr1 (523-584)||(11778980-11779040)
chr1 (523-588)||(16482574-16482638)
chr1 (543-592)||(21072770-21072819)
chr1 (521-586)||(44978869-44978933)
chr1 (527-587)||(7435512-7435571)
chr1 (523-591)||(35305146-35305213)
chr1 (541-589)||(35874300-35874348)
chr1 (484-576)||(50631897-50631989)
chr1 (523-583)||(51781448-51781507)
chr1 (523-586)||(922186-922248)
chr1 (452-499)||(5957531-5957578)
chr1 (452-586)||(12227121-12227256)
chr1 (452-499)||(14077416-14077463)
chr1 (541-588)||(17554179-17554226)
chr1 (540-587)||(24230931-24230978)
chr1 (523-586)||(27295058-27295120)
chr1 (523-590)||(28493806-28493872)
chr1 (452-499)||(50534157-50534204)
chr1 (537-587)||(12178605-12178655)
chr1 (445-499)||(39084980-39085034)
chr1 (449-479)||(49289499-49289529)
chr1 (539-589)||(51056194-51056244)
chr1 (523-584)||(2247069-2247129)
chr1 (445-502)||(48313574-48313631)
chr1 (523-584)||(51184044-51184104)
[»] chr5 (52 HSPs)
chr5 (449-587)||(25684072-25684210)
chr5 (452-588)||(2148399-2148535)
chr5 (449-587)||(39540989-39541127)
chr5 (449-586)||(10453280-10453417)
chr5 (449-586)||(15725945-15726082)
chr5 (449-586)||(37314107-37314244)
chr5 (449-583)||(23189337-23189471)
chr5 (449-583)||(40340430-40340565)
chr5 (449-591)||(31236859-31237001)
chr5 (449-583)||(42534663-42534797)
chr5 (452-584)||(33001720-33001852)
chr5 (449-584)||(16729726-16729861)
chr5 (453-587)||(10688392-10688526)
chr5 (449-586)||(41631218-41631355)
chr5 (452-587)||(22798340-22798478)
chr5 (445-587)||(3881831-3881972)
chr5 (449-583)||(8068589-8068722)
chr5 (452-586)||(13589137-13589271)
chr5 (452-587)||(28770219-28770352)
chr5 (452-585)||(9530363-9530496)
chr5 (452-586)||(19125912-19126046)
chr5 (449-587)||(4094657-4094795)
chr5 (452-586)||(32624176-32624310)
chr5 (454-586)||(22279491-22279622)
chr5 (452-547)||(43411789-43411884)
chr5 (452-572)||(32063798-32063919)
chr5 (452-586)||(11758612-11758752)
chr5 (452-586)||(37963257-37963391)
chr5 (452-588)||(34859707-34859841)
chr5 (523-586)||(28332120-28332183)
chr5 (523-590)||(34302642-34302708)
chr5 (457-583)||(23408255-23408381)
chr5 (546-588)||(27353419-27353461)
chr5 (523-588)||(4618056-4618120)
chr5 (527-588)||(5204967-5205027)
chr5 (523-584)||(6560828-6560888)
chr5 (527-588)||(40756891-40756951)
chr5 (512-583)||(43393088-43393159)
chr5 (527-586)||(5141017-5141075)
chr5 (452-499)||(6335477-6335524)
chr5 (452-499)||(12336300-12336347)
chr5 (452-499)||(13593554-13593601)
chr5 (541-588)||(32993688-32993735)
chr5 (523-586)||(43237697-43237759)
chr5 (445-499)||(2011324-2011378)
chr5 (445-499)||(9499314-9499368)
chr5 (445-499)||(9499474-9499528)
chr5 (523-589)||(27116459-27116524)
chr5 (523-588)||(9589207-9589271)
chr5 (523-584)||(21605650-21605710)
chr5 (541-586)||(36339208-36339253)
chr5 (521-586)||(36409906-36409969)
[»] chr4 (51 HSPs)
chr4 (449-587)||(36569647-36569785)
chr4 (449-588)||(21514987-21515126)
chr4 (449-587)||(45629107-45629245)
chr4 (449-588)||(44998409-44998547)
chr4 (449-587)||(10779261-10779399)
chr4 (449-586)||(24291978-24292114)
chr4 (452-588)||(33612521-33612657)
chr4 (449-587)||(16004803-16004941)
chr4 (452-586)||(48549939-48550073)
chr4 (452-583)||(23639508-23639639)
chr4 (452-586)||(42244810-42244944)
chr4 (449-588)||(46222262-46222403)
chr4 (451-584)||(46633875-46634009)
chr4 (449-588)||(27967507-27967647)
chr4 (452-588)||(46630918-46631055)
chr4 (452-588)||(54499573-54499708)
chr4 (449-588)||(38955312-38955453)
chr4 (452-584)||(27635741-27635873)
chr4 (452-588)||(52257130-52257266)
chr4 (452-586)||(54505838-54505973)
chr4 (445-588)||(42680856-42680999)
chr4 (445-586)||(56016796-56016937)
chr4 (452-586)||(2526171-2526305)
chr4 (517-583)||(23645231-23645297)
chr4 (449-499)||(45754468-45754518)
chr4 (452-502)||(42080600-42080650)
chr4 (538-587)||(10972959-10973008)
chr4 (527-588)||(12756000-12756060)
chr4 (511-586)||(13548735-13548810)
chr4 (472-562)||(16601633-16601724)
chr4 (523-589)||(36091056-36091121)
chr4 (527-584)||(44957267-44957323)
chr4 (523-587)||(31681336-31681399)
chr4 (511-586)||(53936843-53936919)
chr4 (523-586)||(3716325-3716387)
chr4 (523-586)||(18425462-18425524)
chr4 (523-586)||(30342825-30342887)
chr4 (452-503)||(39412442-39412493)
chr4 (527-586)||(40438983-40439041)
chr4 (541-588)||(50607682-50607729)
chr4 (523-589)||(1414443-1414508)
chr4 (541-583)||(23059131-23059173)
chr4 (527-589)||(39103887-39103948)
chr4 (521-587)||(46216114-46216179)
chr4 (541-587)||(48647383-48647429)
chr4 (512-588)||(19842436-19842512)
chr4 (544-589)||(24535850-24535895)
chr4 (538-587)||(33491954-33492003)
chr4 (523-588)||(34280573-34280637)
chr4 (541-586)||(50383691-50383736)
chr4 (523-588)||(52324311-52324375)
[»] chr7 (43 HSPs)
chr7 (449-586)||(24505123-24505260)
chr7 (452-587)||(15090667-15090802)
chr7 (449-586)||(47219956-47220092)
chr7 (445-588)||(1282183-1282326)
chr7 (445-587)||(45197070-45197212)
chr7 (454-586)||(3061902-3062034)
chr7 (452-586)||(25866905-25867039)
chr7 (452-586)||(32186698-32186832)
chr7 (452-586)||(41715414-41715548)
chr7 (452-587)||(2038368-2038503)
chr7 (449-588)||(42039300-42039439)
chr7 (449-587)||(18922575-18922713)
chr7 (452-594)||(42902659-42902801)
chr7 (452-586)||(47069234-47069368)
chr7 (452-587)||(40947246-40947381)
chr7 (452-586)||(27130816-27130950)
chr7 (452-589)||(7574387-7574524)
chr7 (454-586)||(17334739-17334870)
chr7 (449-533)||(9923123-9923207)
chr7 (452-584)||(33704821-33704952)
chr7 (452-547)||(39444004-39444099)
chr7 (457-589)||(13806359-13806491)
chr7 (511-586)||(9682357-9682432)
chr7 (457-587)||(1343018-1343150)
chr7 (541-586)||(6791799-6791844)
chr7 (518-591)||(31743295-31743367)
chr7 (527-588)||(31759991-31760051)
chr7 (523-587)||(41913438-41913501)
chr7 (541-589)||(41968784-41968832)
chr7 (523-587)||(45857818-45857881)
chr7 (541-597)||(47369581-47369637)
chr7 (523-586)||(18990091-18990153)
chr7 (527-586)||(21920040-21920098)
chr7 (452-499)||(27427405-27427452)
chr7 (541-584)||(36533409-36533452)
chr7 (523-586)||(44964165-44964227)
chr7 (540-586)||(17340794-17340839)
chr7 (541-587)||(41771770-41771816)
chr7 (541-583)||(46291461-46291503)
chr7 (527-588)||(17833929-17833989)
chr7 (535-588)||(27800384-27800436)
chr7 (523-588)||(30624067-30624131)
chr7 (452-545)||(31311386-31311480)
[»] chr3 (59 HSPs)
chr3 (449-587)||(33830529-33830667)
chr3 (452-586)||(45927220-45927354)
chr3 (449-588)||(2667482-2667621)
chr3 (449-588)||(52782429-52782568)
chr3 (449-590)||(53186000-53186141)
chr3 (445-587)||(9322699-9322841)
chr3 (449-591)||(44500385-44500527)
chr3 (449-587)||(44962601-44962739)
chr3 (449-586)||(37567218-37567355)
chr3 (452-589)||(54008902-54009039)
chr3 (451-587)||(48925683-48925819)
chr3 (452-586)||(32719985-32720119)
chr3 (452-588)||(1326599-1326735)
chr3 (449-600)||(49951195-49951346)
chr3 (452-587)||(55365647-55365783)
chr3 (452-586)||(48389031-48389166)
chr3 (449-587)||(346689-346827)
chr3 (452-586)||(50560634-50560768)
chr3 (449-573)||(53376604-53376728)
chr3 (452-589)||(26409893-26410029)
chr3 (445-557)||(14460210-14460322)
chr3 (452-586)||(7157311-7157445)
chr3 (445-547)||(36019682-36019784)
chr3 (452-584)||(50465473-50465606)
chr3 (449-547)||(48990351-48990449)
chr3 (511-588)||(52788755-52788832)
chr3 (452-587)||(35320633-35320770)
chr3 (511-587)||(54011141-54011217)
chr3 (449-547)||(51235558-51235658)
chr3 (445-587)||(42622608-42622752)
chr3 (452-503)||(7347173-7347224)
chr3 (445-502)||(881808-881865)
chr3 (452-594)||(23043625-23043766)
chr3 (511-587)||(26885302-26885379)
chr3 (523-586)||(38785426-38785488)
chr3 (523-587)||(11140246-11140309)
chr3 (512-583)||(31479559-31479630)
chr3 (523-586)||(42364271-42364333)
chr3 (523-589)||(876566-876631)
chr3 (511-587)||(9506902-9506979)
chr3 (511-587)||(9514877-9514954)
chr3 (511-587)||(25482574-25482651)
chr3 (523-588)||(29491661-29491726)
chr3 (523-588)||(42622193-42622258)
chr3 (523-587)||(42067578-42067641)
chr3 (534-586)||(43715103-43715154)
chr3 (521-589)||(52776795-52776862)
chr3 (535-586)||(14998506-14998556)
chr3 (523-586)||(19547489-19547551)
chr3 (523-586)||(25592350-25592412)
chr3 (541-595)||(7352529-7352583)
chr3 (445-499)||(20199433-20199487)
chr3 (523-589)||(29347604-29347669)
chr3 (445-499)||(47175553-47175607)
chr3 (537-586)||(23795788-23795837)
chr3 (540-585)||(24169956-24170001)
chr3 (541-586)||(26849924-26849969)
chr3 (523-584)||(40477759-40477820)
chr3 (541-586)||(46671337-46671382)
[»] chr8 (55 HSPs)
chr8 (449-586)||(28897173-28897310)
chr8 (449-588)||(45393716-45393855)
chr8 (449-583)||(37766572-37766706)
chr8 (451-587)||(21835430-21835566)
chr8 (452-587)||(37404875-37405010)
chr8 (452-586)||(1426601-1426735)
chr8 (445-583)||(36835345-36835483)
chr8 (452-584)||(464250-464383)
chr8 (452-584)||(12266349-12266481)
chr8 (449-588)||(45401146-45401285)
chr8 (452-586)||(196338-196471)
chr8 (452-586)||(311175-311308)
chr8 (452-586)||(29039885-29040019)
chr8 (449-596)||(38971453-38971601)
chr8 (449-596)||(39002551-39002699)
chr8 (449-558)||(7223511-7223620)
chr8 (445-586)||(38803434-38803575)
chr8 (452-590)||(27101084-27101223)
chr8 (449-564)||(43182995-43183109)
chr8 (449-547)||(38627026-38627124)
chr8 (452-586)||(3052799-3052933)
chr8 (517-586)||(29565687-29565756)
chr8 (452-584)||(41571982-41572113)
chr8 (520-591)||(14914154-14914225)
chr8 (452-563)||(18844432-18844543)
chr8 (449-490)||(14914114-14914155)
chr8 (541-589)||(26988749-26988797)
chr8 (521-587)||(19718693-19718758)
chr8 (523-584)||(1043060-1043121)
chr8 (535-587)||(12801106-12801157)
chr8 (523-587)||(15726234-15726297)
chr8 (523-587)||(29454553-29454617)
chr8 (523-587)||(29773444-29773507)
chr8 (523-586)||(2273010-2273072)
chr8 (452-503)||(5982459-5982510)
chr8 (523-586)||(28090192-28090254)
chr8 (452-499)||(34058103-34058150)
chr8 (541-596)||(37676299-37676354)
chr8 (521-588)||(40154487-40154552)
chr8 (452-499)||(43331830-43331877)
chr8 (452-499)||(44309652-44309699)
chr8 (523-589)||(16323556-16323621)
chr8 (521-587)||(17096624-17096688)
chr8 (541-587)||(26522328-26522374)
chr8 (524-586)||(34047762-34047823)
chr8 (445-499)||(41674570-41674624)
chr8 (524-586)||(43049537-43049598)
chr8 (521-586)||(2261029-2261094)
chr8 (521-586)||(5215663-5215727)
chr8 (523-588)||(6631249-6631314)
chr8 (523-588)||(6800116-6800180)
chr8 (523-588)||(17642072-17642136)
chr8 (523-588)||(23286563-23286627)
chr8 (521-586)||(32071586-32071650)
chr8 (523-588)||(37511086-37511150)
[»] scaffold0022 (1 HSPs)
scaffold0022 (449-589)||(166687-166827)
[»] scaffold0121 (1 HSPs)
scaffold0121 (452-587)||(13602-13737)
[»] scaffold1999 (1 HSPs)
scaffold1999 (449-586)||(1003-1140)
[»] scaffold0239 (1 HSPs)
scaffold0239 (454-586)||(15380-15512)
[»] scaffold0493 (1 HSPs)
scaffold0493 (449-588)||(1379-1519)
[»] scaffold0005 (1 HSPs)
scaffold0005 (449-586)||(291623-291760)
[»] scaffold0194 (1 HSPs)
scaffold0194 (449-586)||(17764-17900)
[»] scaffold0349 (1 HSPs)
scaffold0349 (452-559)||(8699-8806)
[»] scaffold0017 (1 HSPs)
scaffold0017 (511-584)||(26974-27047)
[»] scaffold0301 (1 HSPs)
scaffold0301 (481-587)||(21459-21563)
[»] scaffold0184 (1 HSPs)
scaffold0184 (541-586)||(16944-16989)
[»] scaffold0078 (1 HSPs)
scaffold0078 (541-586)||(55855-55900)
[»] scaffold0625 (1 HSPs)
scaffold0625 (523-586)||(6607-6669)
[»] scaffold1844 (1 HSPs)
scaffold1844 (527-588)||(1114-1174)
[»] scaffold0432 (1 HSPs)
scaffold0432 (523-592)||(3373-3442)


Alignment Details
Target: chr2 (Bit Score: 249; Significance: 1e-138; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 13 - 277
Target Start/End: Complemental strand, 31658847 - 31658583
Alignment:
Q  13 catcaccattgccatttcttgcatctacaatagaggatcctaaggaagagattcatgatgattattcttctcaaaatcaattgttctcatcagataacct 112  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31658847 catcaccattgccatttcttgcatctacaaaagaggatcctaaggaagagattcatgatgattattcttctcaaaatcaattgttctcatcagataacct 31658748  T
Q  113 catatcatgtaactttgaattttgttttgattatttgagacatgccactatgctatcatcgattgaatcatttgaatttgagaatgtttatgaccagtta 212  Q
    ||||||||||||||||||| ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31658747 catatcatgtaactttgaagtttattttgattatttgagacgtgccactatgctatcatcgattgaatcatttgaatttgagaatgtttatgaccagtta 31658648  T
Q  213 ggattttgatggctatggatatgtttctgtctaagtgtaaatttattttcaaagtttggcattgg 277  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31658647 ggattttgatggctatggatatgtttctgtctaagtgtaaatttattttcaaagtttggcattgg 31658583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 449 - 587
Target Start/End: Complemental strand, 40533388 - 40533250
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||    
T  40533388 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccg 40533289  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  40533288 atacacccaaatttattgggtgtaccatagaatttgcct 40533250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 445 - 587
Target Start/End: Original strand, 2317104 - 2317246
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 544  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||||| |||||||    
T  2317104 ttgatatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttatgacttggtgt 2317203  T
Q  545 accgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||||||||||||||||| ||||||||| ||| |||||    
T  2317204 accgatacacccaaatttattggatgtaccataaaatatgcct 2317246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 449 - 587
Target Start/End: Complemental strand, 37725688 - 37725550
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  37725688 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 37725589  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  37725588 atacacccaaatttattgggtgtaccatagaatttgcct 37725550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 449 - 586
Target Start/End: Original strand, 36947752 - 36947889
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||| |    
T  36947752 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtacag 36947851  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  36947852 atacacccaaatttattgggtgtaccatagaatttgcc 36947889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 449 - 586
Target Start/End: Original strand, 490004 - 490140
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || |||||||||||    
T  490004 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaa-caactaatttattattaattttacgacttggtgtaccg 490102  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  490103 atacacccaaatttattgggtgtaccatagaatttgcc 490140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 452 - 588
Target Start/End: Complemental strand, 1860061 - 1859925
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  1860061 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 1859962  T
Q  552 cacccaaatttattgggtgtaccatataatttgcctt 588  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  1859961 cacccaaattcattgggtgtaccatagaatttgcctt 1859925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 452 - 588
Target Start/End: Complemental strand, 45555516 - 45555380
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| || ||||||||||||||    
T  45555516 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaactcatttattattaattttacgacttggtgtaccgata 45555417  T
Q  552 cacccaaatttattgggtgtaccatataatttgcctt 588  Q
    || ||||||||||||||||||||||| ||||||||||    
T  45555416 catccaaatttattgggtgtaccatagaatttgcctt 45555380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 449 - 588
Target Start/End: Original strand, 13568482 - 13568621
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||| | ||| |||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||    
T  13568482 tatataaaatttaattatcttagtttttaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccg 13568581  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||| ||||||||||||| ||||||||| ||||||||||    
T  13568582 atacatccaaatttattggatgtaccataaaatttgcctt 13568621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 449 - 586
Target Start/End: Original strand, 3724211 - 3724348
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||  | ||||| |||||    
T  3724211 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacaacttggtataccg 3724310  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||||||||||| ||||||||||| ||||||||    
T  3724311 atacacccaaatttattaggtgtaccatagaatttgcc 3724348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 449 - 586
Target Start/End: Complemental strand, 35292646 - 35292510
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  35292646 tatataaaatttaattatcttagttgtcaatgatagaaa-taattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 35292548  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  35292547 atacatccaaatttattgggtgtaccatagaatttgcc 35292510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 452 - 587
Target Start/End: Complemental strand, 6657577 - 6657442
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  6657577 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 6657478  T
Q  552 cacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||||||| |||| |||||||||| |||||||||    
T  6657477 cacccaaattcattgagtgtaccatagaatttgcct 6657442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 452 - 587
Target Start/End: Original strand, 18009227 - 18009362
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| |||||||||||||||||    
T  18009227 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccgata 18009326  T
Q  552 cacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||| ||||||||||| |||| |||| || ||||||    
T  18009327 cacctaaatttattggatgtatcatagaacttgcct 18009362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 452 - 589
Target Start/End: Original strand, 7504296 - 7504434
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtaccgat 550  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        ||||| ||||||||||||||||| || |||||||||||||    
T  7504296 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaacaactgatttattattaattttacgacttggtgtaccgat 7504395  T
Q  551 acacccaaatttattgggtgtaccatataatttgccttt 589  Q
    ||||||||||| ||||||||||||||| |||||||||||    
T  7504396 acacccaaattcattgggtgtaccatagaatttgccttt 7504434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 452 - 586
Target Start/End: Complemental strand, 41839788 - 41839654
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  41839788 ataaaatttaattatcttaattgtcaatgatagaaaataattatttttcttcaagaaaacaactgatttattattaattttacgacttggtgtaccgata 41839689  T
Q  552 cacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||||||||| ||||||||| ||||||||    
T  41839688 cacccaaatttattggatgtaccataaaatttgcc 41839654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 449 - 586
Target Start/End: Complemental strand, 10711414 - 10711277
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    |||| |||||||||||||||||||||||||| ||| |||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  10711414 tatagaaaatttaattatcttagttgtcaatgataaaaaataattatttttcttcaaaacaacaactcatttattattaattttacgacttggtgtaccg 10711315  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||| ||||||||||||| ||||||||||| ||||||||    
T  10711314 atagacccaaatttattaggtgtaccatagaatttgcc 10711277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 449 - 585
Target Start/End: Original strand, 16815120 - 16815256
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtacc 547  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||        ||||| ||||||||||||||||| |||||||||||||    
T  16815120 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaacaact-atttattattaattttacgatttggtgtacc 16815218  T
Q  548 gatacacccaaatttattgggtgtaccatataatttgc 585  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  16815219 gatacacccaaatttattaggtgtaccataaaatttgc 16815256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 449 - 566
Target Start/End: Original strand, 36192240 - 36192357
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  36192240 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 36192339  T
Q  549 atacacccaaatttattg 566  Q
    ||||||||||||||||||    
T  36192340 atacacccaaatttattg 36192357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 452 - 588
Target Start/End: Original strand, 39879192 - 39879328
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||        ||||| |||||||||||||||||||| ||||||||||||||    
T  39879192 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttctttaaaaaaacaactaatttattattaattttatgacttggtgtaccgata 39879291  T
Q  552 cacccaaatttattgggtgtaccatataatttgcctt 588  Q
    |||||||||| ||| | ||||||||| ||||||||||    
T  39879292 cacccaaattcattagatgtaccatagaatttgcctt 39879328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 445 - 584
Target Start/End: Original strand, 5085105 - 5085243
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 544  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| || |||||||    
T  5085105 ttgatatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcagaaaat-aactcatttattattaattttacgacttggtgt 5085203  T
Q  545 accgatacacccaaatttattgggtgtaccatataatttg 584  Q
    || |||||||| ||||||||||||||||| ||| ||||||    
T  5085204 actgatacacctaaatttattgggtgtactatagaatttg 5085243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 452 - 586
Target Start/End: Complemental strand, 21836473 - 21836336
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaata---attatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    |||||||||||||||||||||||||||| ||||||||||   |||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  21836473 ataaaatttaattatcttagttgtcaatgatagaaaatagtaattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 21836374  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||| |||||||||||||||||||| ||||||||    
T  21836373 atacacccgaatttattgggtgtaccatagaatttgcc 21836336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 452 - 588
Target Start/End: Complemental strand, 21425346 - 21425210
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||  ||||||||||| ||||||||||||||||||||||        ||||| ||||||||||||||| | || ||||||||||||||    
T  21425346 ataaaatttaattattatagttgtcaatgatagaaaataattatttttcttataaaaaacaactaatttattattaatttaacgaattggtgtaccgata 21425247  T
Q  552 cacccaaatttattgggtgtaccatataatttgcctt 588  Q
    |||||||||||||||||||||||||| ||||||||||    
T  21425246 cacccaaatttattgggtgtaccatagaatttgcctt 21425210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 452 - 588
Target Start/End: Complemental strand, 26738166 - 26738030
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||| ||||||||||    
T  26738166 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttgatgtaccgata 26738067  T
Q  552 cacccaaatttattgggtgtaccatataatttgcctt 588  Q
    || ||||||| ||||||| ||||||| ||||||||||    
T  26738066 catccaaattcattgggtataccatagaatttgcctt 26738030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 452 - 583
Target Start/End: Original strand, 33424005 - 33424137
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtaccgat 550  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        ||||||||||||||||||||||| || |||| ||||||||    
T  33424005 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaattttacgacttggcgtaccgat 33424104  T
Q  551 acacccaaatttattgggtgtaccatataattt 583  Q
    ||||||||||||||||| ||||||||| |||||    
T  33424105 acacccaaatttattggatgtaccatagaattt 33424137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 452 - 569
Target Start/End: Complemental strand, 28394204 - 28394085
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaa--ctcatttattattaattttatgatttggtgtaccga 549  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||        ||  |||||||||||||||||||| || ||||||||||||    
T  28394204 ataaaatttaattattttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaaaactcatttattattaattttacgacttggtgtaccga 28394105  T
Q  550 tacacccaaatttattgggt 569  Q
    ||||||||||||||||||||    
T  28394104 tacacccaaatttattgggt 28394085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 452 - 588
Target Start/End: Original strand, 33716567 - 33716703
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||||||       ||||| ||||||||||| ||| |  | ||||||||||||||    
T  33716567 ataaaatttaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactaatttattattagtttaacaaattggtgtaccgata 33716666  T
Q  552 cacccaaatttattgggtgtaccatataatttgcctt 588  Q
    |||||||||||||||| |||||| || ||||||||||    
T  33716667 cacccaaatttattggatgtaccgtagaatttgcctt 33716703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 449 - 587
Target Start/End: Original strand, 18576570 - 18576719
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttc-----------ttcnnnnnnncaactcatttattattaattttatgat 537  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||           |||       ||||||||||||||||||||||| ||     
T  18576570 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcaattatttttcttcaaaaaaacaactcatttattattaattttacgac 18576669  T
Q  538 ttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||||||| ||||||||||||||||||| ||||||||| |||||||||    
T  18576670 ttggtgtaccaatacacccaaatttattggatgtaccataaaatttgcct 18576719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 445 - 583
Target Start/End: Complemental strand, 44068189 - 44068052
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 544  Q
    |||||| |||||||||||||||  ||||||||||| |||||||||||| ||||||||||       ||||| ||||||||||||||| |||| ||||| |    
T  44068189 ttgataaataaaatttaattattatagttgtcaatgatagaaaataataatttttcttcaaaaaa-caactaatttattattaatttaatgaattggtat 44068091  T
Q  545 accgatacacccaaatttattgggtgtaccatataattt 583  Q
    ||||||||||||||||||||||| | ||||||| |||||    
T  44068090 accgatacacccaaatttattggatataccataaaattt 44068052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 511 - 585
Target Start/End: Original strand, 16854339 - 16854413
Alignment:
Q  511 caactcatttattattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgc 585  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  16854339 caactcatttattattaattttacgatttggtgtaccgatacacccaaatttattaggtgtaccataaaatttgc 16854413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 452 - 586
Target Start/End: Complemental strand, 14820050 - 14819916
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||  ||||||||||| ||| |||||||||||||||||||       ||||||||||||||||||||| | ||  |||| ||| ||||    
T  14820050 ataaaatttaattattatagttgtcaatgataaaaaataattatttttcttcaaaaaaacaactcatttattattaatttaacgacatggtatactgata 14819951  T
Q  552 cacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||||||  ||||||||||| ||||||||    
T  14819950 cacccaaatttatcaggtgtaccatagaatttgcc 14819916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 379 - 444
Target Start/End: Complemental strand, 31658558 - 31658493
Alignment:
Q  379 taatgggagatttatttgatcgtttaacttatgatgtcttgctcagttggttgataaattgataaa 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31658558 taatgggagatttatttgatcgtttaacttatgatgtcttgctcagttagttgataaattgataaa 31658493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 10 - 197
Target Start/End: Original strand, 31650366 - 31650553
Alignment:
Q  10 catcatcaccattgccatttcttgcatctacaatagaggatcctaaggaagagattcatgatgattattcttctcaaaatcaattgttctcatcagataa 109  Q
    ||||| ||||||||||| ||||||||||||||| ||  ||||| ||||||||||| ||| ||||| ||| | ||||||| |||||||||||| | || ||    
T  31650366 catcaccaccattgccacttcttgcatctacaaaaggagatcccaaggaagagatacatcatgatcattttcctcaaaaccaattgttctcaccggagaa 31650465  T
Q  110 cctcatatcatgtaactttgaattttgttttgattatttgagacatgccactatgctatcatcgattgaatcatttgaatttgagaat 197  Q
     |||  || |||  | |||||  ||| |||||||||||||||||||| || |  |  |||||||| |||||| ||| |||||||||||    
T  31650466 tctccaattatgcgattttgatgtttattttgattatttgagacatgtcagtgagtcatcatcgagtgaatctttttaatttgagaat 31650553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 708 - 753
Target Start/End: Complemental strand, 31658403 - 31658358
Alignment:
Q  708 tgattattttgatgaatgaaacttcttgattttcttagtagtattt 753  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  31658403 tgattattttgatgaatgaaacttcttgattttcttagtagtattt 31658358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 452 - 586
Target Start/End: Original strand, 36049737 - 36049873
Alignment:
Q  452 ataaaatttaattatcttagttgtc-aatcatagaaaataatta-tttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccga 549  Q
    ||||||||||||||||||||||||| ||| |||||||||||||| ||||| ||         || |||||||||| |||| ||| || ||||||||||||    
T  36049737 ataaaatttaattatcttagttgtcaaatgatagaaaataattatttttttttaaaaaaaataattcatttattactaatattacgacttggtgtaccga 36049836  T
Q  550 tacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||| ||||||| ||| | || |||| ||||||||    
T  36049837 tacacctaaatttagtggatatatcatagaatttgcc 36049873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 523 - 586
Target Start/End: Complemental strand, 39620254 - 39620191
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||| | || | ||||||||||||||| ||||| |||||||||||||||| ||||||||    
T  39620254 tattaatttaaagagtgggtgtaccgatacactcaaatatattgggtgtaccataaaatttgcc 39620191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 676 - 709
Target Start/End: Complemental strand, 31658263 - 31658230
Alignment:
Q  676 tcaaagtaagtcattattggacaaatattgtgtg 709  Q
    ||||||||||||||||||||||||||||||||||    
T  31658263 tcaaagtaagtcattattggacaaatattgtgtg 31658230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 521 - 589
Target Start/End: Complemental strand, 11088280 - 11088213
Alignment:
Q  521 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 589  Q
    ||||||||||| |  ||||||||||||| ||||| ||||| | |||||||||||||| |||||||||||    
T  11088280 attattaatttaacaatttggtgtaccggtacactcaaatat-ttgggtgtaccatagaatttgccttt 11088213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 586
Target Start/End: Complemental strand, 11227689 - 11227627
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||| | ||||||||||||| |||||| |||| ||||||| ||||||||| ||||||||    
T  11227689 tattaatttaaggatttggtgtaccaatacactcaaa-ttattggatgtaccatagaatttgcc 11227627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 527 - 586
Target Start/End: Original strand, 15362817 - 15362875
Alignment:
Q  527 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||| |||||||||||||||| ||||| ||||||| ||| |||||||||| ||||||||    
T  15362817 aatttgatgatttggtgtaccggtacactcaaattt-ttgagtgtaccatagaatttgcc 15362875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 662
Target Start/End: Complemental strand, 31658339 - 31658304
Alignment:
Q  627 ctaattcttgtaattgcttttcgaatttttgtgtaa 662  Q
    ||||||||||||||||||||| ||||||||||||||    
T  31658339 ctaattcttgtaattgctttttgaatttttgtgtaa 31658304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 527 - 586
Target Start/End: Original strand, 41555773 - 41555831
Alignment:
Q  527 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||| ||||||||||||||||||||||  |||||| ||| |||||||||| ||||||||    
T  41555773 aatttgatgatttggtgtaccgatacacttaaattt-ttgagtgtaccatagaatttgcc 41555831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 475 - 589
Target Start/End: Original strand, 42641146 - 42641260
Alignment:
Q  475 tcaatcatagaaaataattatttttcttcnnnnnnncaactcattta-ttattaattttatgatttggtgtaccgatacacccaaatttattgggtgtac 573  Q
    ||||| ||||||||| ||| |||||||||       ||||| ||||| |||||||||| | | ||||||| |||| ||||| |||| || ||||||||||    
T  42641146 tcaatgatagaaaatgattttttttcttcaaaaaaacaactaatttaattattaatttaaaggtttggtgcaccggtacactcaaaatt-ttgggtgtac 42641244  T
Q  574 catataatttgccttt 589  Q
    |||| |||||||||||    
T  42641245 catagaatttgccttt 42641260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 540 - 586
Target Start/End: Complemental strand, 45157576 - 45157530
Alignment:
Q  540 ggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  45157576 ggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 45157530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 523 - 588
Target Start/End: Complemental strand, 58982 - 58918
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||||| | |||||| |||||| |||||| |||||| ||||||||||||||| | ||||||||    
T  58982 tattaatttaaggatttgatgtaccaatacactcaaatt-attgggtgtaccatagattttgcctt 58918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 541 - 586
Target Start/End: Original strand, 1580603 - 1580648
Alignment:
Q  541 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  1580603 gtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 1580648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 523 - 584
Target Start/End: Complemental strand, 6884221 - 6884161
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 584  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||||||||||||| ||||||    
T  6884221 tattaatttaaggatttggtgtaccaatacactcaaa-ttgttgggtgtaccatagaatttg 6884161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 522 - 587
Target Start/End: Complemental strand, 15176405 - 15176341
Alignment:
Q  522 ttattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||||||| ||| ||||||| |||| ||||| |||| | ||||||||||||||| |||||||||    
T  15176405 ttattaatttaatgctttggtgcaccggtacactcaaaat-attgggtgtaccatagaatttgcct 15176341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 109; Significance: 2e-54; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 449 - 590
Target Start/End: Original strand, 32519002 - 32519143
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  32519002 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 32519101  T
Q  549 atacacccaaatttattgggtgtaccatataatttgccttta 590  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  32519102 atacacccaaatttattgggtgtaccatataatttgccttta 32519143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 449 - 584
Target Start/End: Original strand, 16989382 - 16989517
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| |||||||||||||||||||| |||||||||||    
T  16989382 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaacttatttattattaattttatgacttggtgtaccg 16989481  T
Q  549 atacacccaaatttattgggtgtaccatataatttg 584  Q
    ||||||||||||||||||||||||||||| ||||||    
T  16989482 atacacccaaatttattgggtgtaccataaaatttg 16989517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 445 - 589
Target Start/End: Complemental strand, 18871064 - 18870919
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtg 543  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||        |||||||||||||||||||||||||| ||||||    
T  18871064 ttgatatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcatcaaaaaaaacaactcatttattattaattttatgacttggtg 18870965  T
Q  544 taccgatacacccaaatttattgggtgtaccatataatttgccttt 589  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||    
T  18870964 taccgatacacccaaatttattggatgtaccatagaatttgccttt 18870919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 449 - 585
Target Start/End: Original strand, 35225100 - 35225236
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  35225100 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 35225199  T
Q  549 atacacccaaatttattgggtgtaccatataatttgc 585  Q
    ||||||||||||||||||| ||||||||| |||||||    
T  35225200 atacacccaaatttattggatgtaccatagaatttgc 35225236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 449 - 588
Target Start/End: Complemental strand, 26810914 - 26810775
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||    
T  26810914 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccg 26810815  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||| ||||||||| ||||||||||| ||||| ||||    
T  26810814 atacacctaaatttattaggtgtaccatagaatttacctt 26810775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 445 - 586
Target Start/End: Complemental strand, 1338995 - 1338853
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtg 543  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||        |||||||||||||||||||||||||| ||||||    
T  1338995 ttgatatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcatcaaaaaaaacaactcatttattattaattttatgacttggtg 1338896  T
Q  544 taccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||||||||||||||||| ||||||||| ||||||||    
T  1338895 taccgatacacccaaatttattggatgtaccatagaatttgcc 1338853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 452 - 587
Target Start/End: Complemental strand, 9226334 - 9226199
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  9226334 ataaaatttaattatcttagttgtcaatgatagaaaaaaattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 9226235  T
Q  552 cacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||||||| ||||||||||||||| |||||||||    
T  9226234 cacccaaattcattgggtgtaccatagaatttgcct 9226199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 449 - 587
Target Start/End: Original strand, 6016074 - 6016212
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||       || || ||||||||||||||||| || |||||||||||    
T  6016074 tatataaaatttaattattttagttgtcaatgatagaaaataattatttttcttcaaaaaaacagcttatttattattaattttacgacttggtgtaccg 6016173  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||  |||||||||||||||||||||| |||||||||    
T  6016174 atacattcaaatttattgggtgtaccatagaatttgcct 6016212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 449 - 558
Target Start/End: Complemental strand, 33954588 - 33954480
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  33954588 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttc-aaaaaacaactcatttattattaattttacgacttggtgtaccg 33954490  T
Q  549 atacacccaa 558  Q
    ||||||||||    
T  33954489 atacacccaa 33954480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 452 - 559
Target Start/End: Original strand, 27719277 - 27719384
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  27719277 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 27719376  T
Q  552 cacccaaa 559  Q
    ||| ||||    
T  27719377 cactcaaa 27719384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 452 - 586
Target Start/End: Complemental strand, 24025665 - 24025531
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaa-taattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgat 550  Q
    |||||||||||||||||||||||||||| |||||||| | |||||||||||||       ||||| | |||||||||||||||  | |||||||||||||    
T  24025665 ataaaatttaattatcttagttgtcaatgatagaaaatttattatttttcttcaaaaaaacaactgaattattattaattttacaacttggtgtaccgat 24025566  T
Q  551 acacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||||| ||| ||||||||||| ||||||||    
T  24025565 acacccaaattcatt-ggtgtaccatagaatttgcc 24025531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 452 - 587
Target Start/End: Original strand, 34315397 - 34315530
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||        |||||  |||||||||||||||| || ||||| ||||||||    
T  34315397 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttctt-aaaaaaacaact-gtttattattaattttacgacttggtataccgata 34315494  T
Q  552 cacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||| ||||| ||||| ||||||||| |||||||||    
T  34315495 cacctaaattcattggatgtaccatagaatttgcct 34315530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 452 - 547
Target Start/End: Complemental strand, 34969586 - 34969491
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtacc 547  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| |||||||||||||    
T  34969586 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaactcatttattattaattttacgatttggtgtacc 34969491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 452 - 555
Target Start/End: Original strand, 29639007 - 29639110
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttgg-tgtaccgat 550  Q
    |||||||||||||||||||||||||||| ||||||||| ||||| |||||||       |||||||||||||||||||||||||| |||| |||||||||    
T  29639007 ataaaatttaattatcttagttgtcaatgatagaaaatgattatgtttcttc-aaaaaacaactcatttattattaattttatgacttggatgtaccgat 29639105  T
Q  551 acacc 555  Q
    |||||    
T  29639106 acacc 29639110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 472 - 588
Target Start/End: Complemental strand, 21181253 - 21181137
Alignment:
Q  472 ttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcattt-attattaattttatgatttggtgtaccgatacacccaaatttattgggtg 570  Q
    |||||||| |||||||| ||||||||||||||       |||||  ||| | ||| ||||| |||||||||||||||||||||| ||||||| ||| |||    
T  21181253 ttgtcaatgatagaaaacaattatttttcttcgaaaaaacaacttgtttcaatataaatttgatgatttggtgtaccgatacactcaaattt-ttgagtg 21181155  T
Q  571 taccatataatttgcctt 588  Q
    ||||||| ||||||||||    
T  21181154 taccatagaatttgcctt 21181137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 445 - 583
Target Start/End: Original strand, 6974965 - 6975103
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcattt-attattaattttatgatttggtg 543  Q
    |||||| |||||||||||||||  || || | ||| ||||||||||||||||| |||||       |||||||||| ||||||||||| |  |||||||     
T  6974965 ttgataaataaaatttaattattataattataaatgatagaaaataattatttatcttcaaaaaaacaactcatttaattattaatttaacaatttggta 6975064  T
Q  544 taccgatacacccaaatttattgggtgtaccatataattt 583  Q
    |||||  |||| ||||||| |||||||||||||| |||||    
T  6975065 taccggcacactcaaattt-ttgggtgtaccatagaattt 6975103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 527 - 587
Target Start/End: Complemental strand, 1705664 - 1705605
Alignment:
Q  527 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||| |||||||||||||||||||||| ||||||| ||| |||||||||| |||||||||    
T  1705664 aatttgatgatttggtgtaccgatacactcaaattt-ttgagtgtaccatagaatttgcct 1705605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 523 - 587
Target Start/End: Original strand, 32834118 - 32834181
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||| ||||||||||||||| |||||| |||| ||||| ||||||||||| |||||||||    
T  32834118 tattaatttaatgatttggtgtaccaatacactcaaa-ttattaggtgtaccatagaatttgcct 32834181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 586
Target Start/End: Original strand, 8549916 - 8549961
Alignment:
Q  541 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||    
T  8549916 gtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 8549961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 511 - 586
Target Start/End: Complemental strand, 9661828 - 9661752
Alignment:
Q  511 caactcatttat-tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||||  ||||||||| | || | ||||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  9661828 caactcatttaactattaatttaaagaatgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 9661752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 472 - 586
Target Start/End: Original strand, 7344607 - 7344722
Alignment:
Q  472 ttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcattta-ttattaattttatgatttggtgtaccgatacacccaaatttattgggt 569  Q
    |||||||| |||||||| ||||||||||||||        |||||| |||| ||||| |||| || ||||||||||||| ||||| |||| || ||||||    
T  7344607 ttgtcaatgatagaaaacaattatttttcttcaaaaaaaacaactcgtttaattatttatttaataatttggtgtaccggtacactcaaa-ttgttgggt 7344705  T
Q  570 gtaccatataatttgcc 586  Q
    |||||||| ||||||||    
T  7344706 gtaccatagaatttgcc 7344722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 11273689 - 11273736
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 499  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  11273689 ataagatttaattattatagttgtcaatgatagaaaataattattttt 11273736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 14715539 - 14715586
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 499  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  14715539 ataagatttaattattatagttgtcaatgatagaaaataattattttt 14715586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 24151398 - 24151445
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 499  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  24151398 ataagatttaattattatagttgtcaatgatagaaaataattattttt 24151445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 527 - 586
Target Start/End: Complemental strand, 24248862 - 24248804
Alignment:
Q  527 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||| |||||||||||||||| ||||| ||||||| ||| |||||||||| ||||||||    
T  24248862 aatttgatgatttggtgtaccggtacactcaaattt-ttgagtgtaccatagaatttgcc 24248804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 534 - 587
Target Start/End: Original strand, 15383559 - 15383611
Alignment:
Q  534 tgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||| |||| |||||| ||||||| |||| |||||||||||||||||||    
T  15383559 tgatttggtataccaatacactcaaattt-ttggatgtaccatataatttgcct 15383611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 109; Significance: 2e-54; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 445 - 586
Target Start/End: Original strand, 43224911 - 43225052
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 544  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||||| |||||||    
T  43224911 ttgatatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttatgacttggtgt 43225010  T
Q  545 accgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  43225011 accgatacacccaaatttattgggtgtaccatagaatttgcc 43225052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 449 - 587
Target Start/End: Original strand, 7426930 - 7427068
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||    
T  7426930 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccg 7427029  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  7427030 atacacccaaatttattgggtgtaccatagaatttgcct 7427068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 449 - 589
Target Start/End: Complemental strand, 14191027 - 14190887
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  14191027 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 14190928  T
Q  549 atacacccaaatttattgggtgtaccatataatttgccttt 589  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  14190927 atacacccaaatttattgggtgtaccataaaatttgccttt 14190887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 449 - 588
Target Start/End: Original strand, 3150455 - 3150594
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  3150455 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 3150554  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||||||||||||||| ||||||||| ||||| ||||    
T  3150555 atacacccaaatttattggatgtaccatagaatttacctt 3150594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 452 - 591
Target Start/End: Complemental strand, 17376489 - 17376350
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  17376489 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgata 17376390  T
Q  552 cacccaaatttattgggtgtaccatataatttgcctttaa 591  Q
    |||||||||||||||| ||||||||| |||||| ||||||    
T  17376389 cacccaaatttattggatgtaccatagaatttgtctttaa 17376350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 452 - 587
Target Start/End: Complemental strand, 25493632 - 25493497
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||| |||    
T  25493632 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccaata 25493533  T
Q  552 cacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||||||||||||| ||||||||| |||||||||    
T  25493532 cacccaaatttattggatgtaccatagaatttgcct 25493497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 448 - 587
Target Start/End: Complemental strand, 46872507 - 46872368
Alignment:
Q  448 atatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtacc 547  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| || ||||||||||    
T  46872507 atatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcaaaaaaataactcatttattattaattttacgacttggtgtacc 46872408  T
Q  548 gatacacccaaatttattgggtgtaccatataatttgcct 587  Q
     |||||||||||||||||||||||| |||| |||||||||    
T  46872407 aatacacccaaatttattgggtgtatcatagaatttgcct 46872368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 452 - 584
Target Start/End: Original strand, 8569249 - 8569381
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| || ||||||||||||||    
T  8569249 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaagaaaaactcatttattattaattttacgacttggtgtaccgata 8569348  T
Q  552 cacccaaatttattgggtgtaccatataatttg 584  Q
    |||||||||||||||||||||||||| ||||||    
T  8569349 cacccaaatttattgggtgtaccatagaatttg 8569381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 445 - 577
Target Start/End: Original strand, 52273985 - 52274117
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 544  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||    
T  52273985 ttgatatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgt 52274084  T
Q  545 accgatacacccaaatttattgggtgtaccata 577  Q
    ||||||||| ||||||||||||| |||||||||    
T  52274085 accgatacatccaaatttattggatgtaccata 52274117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 452 - 586
Target Start/End: Original strand, 9223127 - 9223262
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnnc-aactcatttattattaattttatgatttggtgtaccgat 550  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||| ||||||||||||||||    
T  9223127 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaataactcatttattattaattttacgatttggtgtaccgat 9223226  T
Q  551 acacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||||||||||||||||||||| ||||||||    
T  9223227 acacccaaatttattgggtgtaccatagaatttgcc 9223262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 449 - 588
Target Start/End: Original strand, 33829135 - 33829274
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||| |||||||||||||| || ||||||||||     
T  33829135 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatctattattaattttacgacttggtgtacca 33829234  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  33829235 atacacccaaatttattggatgtaccatagaatttgcctt 33829274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 449 - 588
Target Start/End: Complemental strand, 33838831 - 33838692
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||| |||||||||||||| || ||||||||||     
T  33838831 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatctattattaattttacgacttggtgtacca 33838732  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  33838731 atacacccaaatttattggatgtaccatagaatttgcctt 33838692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 452 - 586
Target Start/End: Complemental strand, 27801944 - 27801810
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  27801944 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttctaaaaaacaactcatttattattaattttacgacttggtgtaccgata 27801845  T
Q  552 cacccaaatttattgggtgtaccatataatttgcc 586  Q
    || ||||||||||||||||||| ||| ||||||||    
T  27801844 catccaaatttattgggtgtacaatagaatttgcc 27801810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 449 - 586
Target Start/End: Complemental strand, 10061294 - 10061157
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||| |    
T  10061294 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtactg 10061195  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||||||||||||  ||||||||| ||||||||    
T  10061194 atacacccaaatttattgaatgtaccatagaatttgcc 10061157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 449 - 584
Target Start/End: Complemental strand, 39853094 - 39852959
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||| ||    
T  39853094 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtatcg 39852995  T
Q  549 atacacccaaatttattgggtgtaccatataatttg 584  Q
    ||||||| ||||||||||||||||| ||| ||||||    
T  39852994 atacacctaaatttattgggtgtactatagaatttg 39852959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 452 - 587
Target Start/End: Complemental strand, 48480984 - 48480849
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  48480984 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 48480885  T
Q  552 cacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||||||| ||||||| ||||||| |||||||||    
T  48480884 cacccaaattcattgggtataccatagaatttgcct 48480849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 452 - 586
Target Start/End: Complemental strand, 29171299 - 29171165
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||| |||||    
T  29171299 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtatcgata 29171200  T
Q  552 cacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||| | ||||||||||||| ||||||||    
T  29171199 cacccaaattcactgggtgtaccatagaatttgcc 29171165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 449 - 583
Target Start/End: Original strand, 44647515 - 44647649
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  44647515 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 44647614  T
Q  549 atacacccaaatttattgggtgtaccatataattt 583  Q
    ||||| ||||||||||  ||||||||||| |||||    
T  44647615 atacatccaaatttatcaggtgtaccatagaattt 44647649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 445 - 584
Target Start/End: Original strand, 47860992 - 47861131
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 544  Q
    |||||||||||||||||||||||||| || | ||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||    
T  47860992 ttgatatataaaatttaattatcttaattataaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgt 47861091  T
Q  545 accgatacacccaaatttattgggtgtaccatataatttg 584  Q
    ||||||||||||||||||||||| ||||| ||| ||||||    
T  47861092 accgatacacccaaatttattggatgtacgatagaatttg 47861131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 452 - 586
Target Start/End: Complemental strand, 5057333 - 5057199
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||| ||||||||||||||||| || ||||||||||||||    
T  5057333 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaataactgatttattattaattttacgacttggtgtaccgata 5057234  T
Q  552 cacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||| ||||| ||||||||||||||| ||||||||    
T  5057233 cacctaaattcattgggtgtaccatagaatttgcc 5057199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 452 - 586
Target Start/End: Original strand, 24248075 - 24248209
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    ||||||||||||| |||||||||||||| ||| |||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  24248075 ataaaatttaattctcttagttgtcaatgatataaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgata 24248174  T
Q  552 cacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||||||| | ||||||||| ||||||||    
T  24248175 cacccaaatttattagatgtaccatagaatttgcc 24248209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 449 - 586
Target Start/End: Complemental strand, 27038680 - 27038543
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| || |||||||||||    
T  27038680 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaataactcatttattattaattttacgacttggtgtaccg 27038581  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||| |||||||||||  ||||| ||| ||||||||    
T  27038580 atacactcaaatttattgaatgtactataaaatttgcc 27038543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 449 - 587
Target Start/End: Original strand, 37765523 - 37765662
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttc-nnnnnnncaactcatttattattaattttatgatttggtgtacc 547  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||        ||||||||||||||||||||||| || || ||| |||    
T  37765523 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaattttacgacttagtgcacc 37765622  T
Q  548 gatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||| |||||||||||||||| |||||| |||||||||    
T  37765623 gatacatccaaatttattgggtgcaccatagaatttgcct 37765662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 452 - 587
Target Start/End: Complemental strand, 40850155 - 40850022
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||         |||||||||||||||||||||| || ||||||||||||||    
T  40850155 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttaaaaaaa--aactcatttattattaattttacgacttggtgtaccgata 40850058  T
Q  552 cacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||||||||||||| ||||| ||| |||||||||    
T  40850057 cacccaaatttattggatgtactatagaatttgcct 40850022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 452 - 586
Target Start/End: Original strand, 48868336 - 48868470
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||  ||||||||    
T  48868336 ataaaatttaattatcttagttgttaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggaataccgata 48868435  T
Q  552 cacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||||||||| ||||||||| | ||||||    
T  48868436 cacccaaatttattggatgtaccatagactttgcc 48868470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 452 - 588
Target Start/End: Original strand, 9260089 - 9260225
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||| ||||||| ||||| |||||||||||||||||||||||        |||||||||||||||||||||| || ||| ||||||||||    
T  9260089 ataaaatttaattaccttagttatcaatgatagaaaataattatttttcttcaaaaaaataactcatttattattaattttacgacttgatgtaccgata 9260188  T
Q  552 cacccaaatttattgggtgtaccatataatttgcctt 588  Q
    || ||||||| ||||||||||||||| ||||||||||    
T  9260189 catccaaattcattgggtgtaccatagaatttgcctt 9260225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 452 - 583
Target Start/End: Complemental strand, 41321139 - 41321008
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |       |||| |||| ||||||||||||| || |||||| |||||||    
T  41321139 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttctacaaaaaaacaacacattcattattaattttacgacttggtgaaccgata 41321040  T
Q  552 cacccaaatttattgggtgtaccatataattt 583  Q
    ||||||||||||||||||||||| || |||||    
T  41321039 cacccaaatttattgggtgtaccgtagaattt 41321008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 452 - 586
Target Start/End: Original strand, 33234327 - 33234461
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||| || | ||||||||||||||    
T  33234327 ataaaatttaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactaatttattattaatttaataaattggtgtaccgata 33234426  T
Q  552 cacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||||||||||||||| | | ||||||||    
T  33234427 cacccaaatttattgggtgtactacagaatttgcc 33234461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 452 - 587
Target Start/End: Original strand, 50502617 - 50502756
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  50502617 ataaaatttaattatcttagttgtcaatgatagaaattaattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgata 50502716  T
Q  552 caccc----aaatttattgggtgtaccatataatttgcct 587  Q
    |||||    ||||| |||||||||| |||| |||||||||    
T  50502717 cacccaattaaattcattgggtgtatcataaaatttgcct 50502756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 452 - 586
Target Start/End: Complemental strand, 2684144 - 2684011
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||| |||| |||||    
T  2684144 ataaaatttaattatcttagttgacaatgatagaaaataattatttttcttcaaaaaa-caactcatttattattaattttacgacttgatgtatcgata 2684046  T
Q  552 cacccaaatttattgggtgtaccatataatttgcc 586  Q
    || ||||||||||| ||||||||||| ||||||||    
T  2684045 catccaaatttattaggtgtaccatagaatttgcc 2684011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 452 - 588
Target Start/End: Original strand, 28095021 - 28095156
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||||||       ||| | ||||||||||||||| |||| ||||||||||||||    
T  28095021 ataaaatttaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaacaattaatttattattaatttaatgaattggtgtaccgata 28095120  T
Q  552 cacccaaatttattgggtgtaccatataatttgcctt 588  Q
     ||||||||||||||| ||||||||| ||||||||||    
T  28095121 -acccaaatttattggatgtaccatagaatttgcctt 28095156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 449 - 563
Target Start/End: Original strand, 31571239 - 31571353
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    |||||||| ||||| |||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  31571239 tatataaagtttaactatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 31571338  T
Q  549 atacacccaaattta 563  Q
    ||| |||||||||||    
T  31571339 atagacccaaattta 31571353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 452 - 584
Target Start/End: Original strand, 10635669 - 10635802
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttc-nnnnnnncaactcatttattattaattttatgatttggtgtaccgat 550  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| |        |||||||||||||||||| |||| || |||||||||||||    
T  10635669 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttctccaaaaaaaacaactcatttattattaactttacgacttggtgtaccgat 10635768  T
Q  551 acacccaaatttattgggtgtaccatataatttg 584  Q
    ||| ||||| ||||| ||||||||||| ||||||    
T  10635769 acatccaaaattattaggtgtaccatagaatttg 10635802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 452 - 586
Target Start/End: Original strand, 14131627 - 14131756
Alignment:
Q  452 ataaaatttaattatcttagttgtcaa-tcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgat 550  Q
    ||||||||||||| ||||||||||||| | |||||||||||||||||||||||       |||      |||||||||||||| ||||||||||||||||    
T  14131627 ataaaatttaattttcttagttgtcaaataatagaaaataattatttttcttcaataaaacaa------tattattaattttacgatttggtgtaccgat 14131720  T
Q  551 acacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||||||||||||||||||||| ||||||||    
T  14131721 acacccaaatttattgggtgtaccatagaatttgcc 14131756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 452 - 588
Target Start/End: Complemental strand, 49739277 - 49739141
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||||||        |||| ||||||||||||||| |  | ||||||||||||||    
T  49739277 ataaaatttaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaataactaatttattattaatttaacaaattggtgtaccgata 49739178  T
Q  552 cacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||||||||| || ||||||||| ||||||||||    
T  49739177 cacccaaatttatcggatgtaccatagaatttgcctt 49739141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 452 - 585
Target Start/End: Complemental strand, 20280355 - 20280223
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||  |||||||||||  |||||||||||||||||||||        ||||| ||||||||||||||| |||| ||||||||||||||    
T  20280355 ataaaatttaattattatagttgtcaatggtagaaaataattatttttctt-aaaaaaacaactaatttattattaatttaatgaattggtgtaccgata 20280257  T
Q  552 cacccaaatttattgggtgtaccatataatttgc 585  Q
    |||||||||||||||  ||||||||| |||||||    
T  20280256 cacccaaatttattgaatgtaccatagaatttgc 20280223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 452 - 584
Target Start/End: Complemental strand, 22821382 - 22821249
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtaccgat 550  Q
    |||||||||||||||  | | ||||||| |||||||||||||||||||||||        ||||||||||||||||||||| | || |||||||||||||    
T  22821382 ataaaatttaattattattgctgtcaatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaatttaacgacttggtgtaccgat 22821283  T
Q  551 acacccaaatttattgggtgtaccatataatttg 584  Q
    ||| ||||||||||||| ||||||||| ||||||    
T  22821282 acatccaaatttattggatgtaccatagaatttg 22821249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 587
Target Start/End: Complemental strand, 52079580 - 52079440
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttctt--cnnnnnnncaactcatttattattaattttatgatttggtgtac 546  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||          |||||||||||||||||||||||  | || ||||||    
T  52079580 tatataaaatttaattatcttagttgtcaaagatagaaaataattatttttcttaaaaaaaaaacaactcatttattattaattttacaacttagtgtac 52079481  T
Q  547 cgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||| ||||||||||||  ||||||||  |||||||||    
T  52079480 cgatacatccaaatttattgaatgtaccattgaatttgcct 52079440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 472 - 587
Target Start/End: Original strand, 1658833 - 1658948
Alignment:
Q  472 ttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgatacacccaaatttattgggtgt 571  Q
    |||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||| |||||||||||||| ||||| || | ||||    
T  1658833 ttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttgatgtaccgatacaccaaaattcatcgagtgt 1658932  T
Q  572 accatataatttgcct 587  Q
    |||||| |||||||||    
T  1658933 accatagaatttgcct 1658948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 452 - 534
Target Start/End: Original strand, 31016140 - 31016222
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttat 534  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       |||| |||||||||||||||||||    
T  31016140 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaacacatttattattaattttat 31016222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 526 - 587
Target Start/End: Complemental strand, 49686045 - 49685984
Alignment:
Q  526 taattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49686045 taattttacgacttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcct 49685984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 452 - 565
Target Start/End: Original strand, 41550419 - 41550532
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||  || |||||||| | | |||||||||||||||||||       ||||| ||||||||||||||| || | ||||| ||||||||    
T  41550419 ataaaatttaattattataattgtcaatgagaaaaaataattatttttcttcaaaaaaacaactaatttattattaatttaataaattggtataccgata 41550518  T
Q  552 cacccaaatttatt 565  Q
    ||||||||||||||    
T  41550519 cacccaaatttatt 41550532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 521 - 589
Target Start/End: Complemental strand, 34256517 - 34256450
Alignment:
Q  521 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 589  Q
    ||||||||||| || ||||||||||||||||||| |||| || |||||||||||||| |||||||||||    
T  34256517 attattaatttaataatttggtgtaccgatacactcaaa-ttgttgggtgtaccatagaatttgccttt 34256450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 512 - 586
Target Start/End: Original strand, 31075942 - 31076017
Alignment:
Q  512 aactcattta-ttattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||| |||||||||| |||| | ||||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  31075942 aactcatttaattattaatttaatgaatgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 31076017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 452 - 502
Target Start/End: Original strand, 33771917 - 33771967
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttctt 502  Q
    |||||||||||||||  ||||||||||| ||||||||||||||||||||||    
T  33771917 ataaaatttaattattatagttgtcaatgatagaaaataattatttttctt 33771967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 453 - 531
Target Start/End: Original strand, 41757137 - 41757215
Alignment:
Q  453 taaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattt 531  Q
    ||||||||||||||  ||||||||||||||| ||||||||||||||| |||       ||||| |||||||||||||||    
T  41757137 taaaatttaattattatagttgtcaatcatataaaataattatttttattcaaaaaaacaacttatttattattaattt 41757215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 523 - 587
Target Start/End: Complemental strand, 9166935 - 9166872
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||||||  |||||||||||||| |||||| ||||||| |||||||||| |||||||||||||    
T  9166935 tattaatttattgatttggtgtaccaatacactcaaattt-ttgggtgtactatataatttgcct 9166872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 527 - 585
Target Start/End: Original strand, 38207879 - 38207936
Alignment:
Q  527 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgc 585  Q
    ||||| |||||||||||||||||||||| ||||||| ||| | ||||||||||||||||    
T  38207879 aatttgatgatttggtgtaccgatacactcaaattt-ttgagcgtaccatataatttgc 38207936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 586
Target Start/End: Original strand, 477796 - 477841
Alignment:
Q  541 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||    
T  477796 gtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 477841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 523 - 584
Target Start/End: Original strand, 11778980 - 11779040
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 584  Q
    ||||||||| |||||||| |||||| |||||| ||||| | |||||||||||||||||||||    
T  11778980 tattaatttaatgatttgttgtaccaatacactcaaatct-ttgggtgtaccatataatttg 11779040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 523 - 588
Target Start/End: Complemental strand, 16482638 - 16482574
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||||| | ||||||||||||| ||||||  ||||| ||||||||||||||| ||||||||||    
T  16482638 tattaatttaaggatttggtgtaccaatacacttaaatt-attgggtgtaccatagaatttgcctt 16482574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 543 - 592
Target Start/End: Complemental strand, 21072819 - 21072770
Alignment:
Q  543 gtaccgatacacccaaatttattgggtgtaccatataatttgcctttaat 592  Q
    |||||||||||  ||||| |||||||||||||||||||||||||| ||||    
T  21072819 gtaccgatacagtcaaatgtattgggtgtaccatataatttgcctataat 21072770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 521 - 586
Target Start/End: Complemental strand, 44978933 - 44978869
Alignment:
Q  521 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||||| || ||||||||||||| ||||| |||| || |||||||||||||| ||||||||    
T  44978933 attattaatttaataatttggtgtaccggtacactcaaa-ttgttgggtgtaccatagaatttgcc 44978869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 527 - 587
Target Start/End: Complemental strand, 7435571 - 7435512
Alignment:
Q  527 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||| |||||||||||||||| ||||| ||||||| ||| |||||||||| |||||||||    
T  7435571 aatttgatgatttggtgtaccggtacactcaaattt-ttgagtgtaccatagaatttgcct 7435512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 523 - 591
Target Start/End: Complemental strand, 35305213 - 35305146
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctttaa 591  Q
    ||||||||| |  |||||||||||| |||||| ||||||  |||||||||||||| |||||||||||||    
T  35305213 tattaatttaagaatttggtgtaccaatacactcaaattg-ttgggtgtaccatagaatttgcctttaa 35305146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 541 - 589
Target Start/End: Original strand, 35874300 - 35874348
Alignment:
Q  541 gtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 589  Q
    ||||||| |||||| ||||| |||||||||||||||| |||||||||||    
T  35874300 gtgtaccaatacactcaaatatattgggtgtaccatagaatttgccttt 35874348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 484 - 576
Target Start/End: Original strand, 50631897 - 50631989
Alignment:
Q  484 gaaaataattatttttcttcnnnnnnncaactcattta-ttattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccat 576  Q
    |||| |||||||||||||||       ||||||||||| |||||||||| | | |||||||||||| ||||| |||| ||||||||||||||||    
T  50631897 gaaagtaattatttttcttcaaaaaatcaactcatttaattattaatttaacgctttggtgtaccggtacactcaaa-ttattgggtgtaccat 50631989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 523 - 583
Target Start/End: Original strand, 51781448 - 51781507
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataattt 583  Q
    ||||||||| | ||||||||||||| |||||| |||| ||||||||||||||||| |||||    
T  51781448 tattaatttaaggatttggtgtaccaatacactcaaa-ttattgggtgtaccatagaattt 51781507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 586
Target Start/End: Original strand, 922186 - 922248
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||||||||||||| ||||||||    
T  922186 tattaatttaaggatttggtgtaccaatacactcaaa-ttgttgggtgtaccatagaatttgcc 922248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 5957531 - 5957578
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 499  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  5957531 ataagatttaattattatagttgtcaatgatagaaaataattattttt 5957578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 586
Target Start/End: Complemental strand, 12227256 - 12227121
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt-cttcnnnnnnncaactcattta-ttattaattttatgatttggtgtaccga 549  Q
    |||| ||||||||||  || || ||||| ||||||||||||||||||| ||||       ||||| ||||| |||||||||| ||| |||||||||| |     
T  12227256 ataagatttaattattataattatcaatgatagaaaataattattttttcttcaaaaaaacaactaatttaattattaatttaatgctttggtgtactgg 12227157  T
Q  550 tacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||| |||| |  |||||||||||||| ||||||||    
T  12227156 tacactcaaaatg-ttgggtgtaccatagaatttgcc 12227121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 499
Target Start/End: Complemental strand, 14077463 - 14077416
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 499  Q
    |||||||||||||||  || |||||||| |||||||||||||||||||    
T  14077463 ataaaatttaattattataattgtcaatgatagaaaataattattttt 14077416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 541 - 588
Target Start/End: Original strand, 17554179 - 17554226
Alignment:
Q  541 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    |||||||| ||||| ||||| |||||||||||||||| ||||||||||    
T  17554179 gtgtaccggtacactcaaatatattgggtgtaccatagaatttgcctt 17554226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 540 - 587
Target Start/End: Original strand, 24230931 - 24230978
Alignment:
Q  540 ggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||||||||| ||||| |||||| ||||||||| |||||||||    
T  24230931 ggtgtaccgatacactcaaatatattggatgtaccatagaatttgcct 24230978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 586
Target Start/End: Complemental strand, 27295120 - 27295058
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||||||||||||| ||||||||    
T  27295120 tattaatttaaagatttggtgtaccaatacactcaaa-ttgttgggtgtaccatagaatttgcc 27295058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 590
Target Start/End: Complemental strand, 28493872 - 28493806
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttta 590  Q
    ||||||||| | ||||||||||| | ||||||  ||||| ||||||||||||||| ||||||||||||    
T  28493872 tattaatttaaggatttggtgtaacaatacacttaaatt-attgggtgtaccatagaatttgccttta 28493806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 50534157 - 50534204
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 499  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  50534157 ataagatttaattattatagttgtcaatgatagaaaataattattttt 50534204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 537 - 587
Target Start/End: Complemental strand, 12178655 - 12178605
Alignment:
Q  537 tttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||| ||||||||| ||| ||||| ||||||||||||| ||||||||||||    
T  12178655 tttgatgtaccgatgcactcaaatatattgggtgtaccgtataatttgcct 12178605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 445 - 499
Target Start/End: Original strand, 39084980 - 39085034
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattattttt 499  Q
    |||||| |||| ||||||||||  || |||||||| |||||||||||||||||||    
T  39084980 ttgataaataagatttaattattataattgtcaatgatagaaaataattattttt 39085034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 449 - 479
Target Start/End: Original strand, 49289499 - 49289529
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaat 479  Q
    |||||||||||||||||||||||||||||||    
T  49289499 tatataaaatttaattatcttagttgtcaat 49289529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 539 - 589
Target Start/End: Complemental strand, 51056244 - 51056194
Alignment:
Q  539 tggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 589  Q
    |||||||||| ||||| ||||| |||| ||||||||||| |||||||||||    
T  51056244 tggtgtaccggtacactcaaatatattaggtgtaccatagaatttgccttt 51056194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 523 - 584
Target Start/End: Complemental strand, 2247129 - 2247069
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 584  Q
    ||||||||| ||||||||||||||| |||||| ||||| | || ||||||||||| ||||||    
T  2247129 tattaatttaatgatttggtgtaccaatacactcaaatct-ttaggtgtaccatagaatttg 2247069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 445 - 502
Target Start/End: Original strand, 48313574 - 48313631
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttctt 502  Q
    |||||| |||| ||| ||||||  || |||||||| ||||||||||||||||||||||    
T  48313574 ttgataaataagattgaattattataattgtcaatgatagaaaataattatttttctt 48313631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 523 - 584
Target Start/End: Complemental strand, 51184104 - 51184044
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 584  Q
    ||||||||| |||||||| |||||| |||||| ||||| | |||||||||||||| ||||||    
T  51184104 tattaatttaatgatttgttgtaccaatacactcaaatct-ttgggtgtaccatagaatttg 51184044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 106; Significance: 1e-52; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 449 - 587
Target Start/End: Complemental strand, 25684210 - 25684072
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||    
T  25684210 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccg 25684111  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  25684110 atacacccaaatttattgggtgtaccatagaatttgcct 25684072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 452 - 588
Target Start/End: Original strand, 2148399 - 2148535
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||||| ||||||||||||||    
T  2148399 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttatgacttggtgtaccgata 2148498  T
Q  552 cacccaaatttattgggtgtaccatataatttgcctt 588  Q
    |||||||||||||||||||||||| | ||||||||||    
T  2148499 cacccaaatttattgggtgtaccaaagaatttgcctt 2148535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 449 - 587
Target Start/End: Original strand, 39540989 - 39541127
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||    
T  39540989 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttatgatttggtgtatcg 39541088  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||| ||||||||||||||||||| ||| |||||||||    
T  39541089 atacatccaaatttattgggtgtacaatagaatttgcct 39541127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 449 - 586
Target Start/End: Complemental strand, 10453417 - 10453280
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||    
T  10453417 tatataaaatttaattatcttagttgtcaataatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccg 10453318  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||||||||||| |||||||| || ||||||||    
T  10453317 atacacccaaatttatttggtgtaccgtagaatttgcc 10453280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 449 - 586
Target Start/End: Complemental strand, 15726082 - 15725945
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||| ||    
T  15726082 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtatcg 15725983  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  15725982 atacacccaaatttattgggtgtaccataaaatttgcc 15725945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 449 - 586
Target Start/End: Original strand, 37314107 - 37314244
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || || ||||||||    
T  37314107 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttaggacttagtgtaccg 37314206  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  37314207 atacacccaaatttattgggtgtaccatagaatttgcc 37314244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 449 - 583
Target Start/End: Original strand, 23189337 - 23189471
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||| |||||||    
T  23189337 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttgatgtaccg 23189436  T
Q  549 atacacccaaatttattgggtgtaccatataattt 583  Q
    ||||||||||||||||||||||||||||| |||||    
T  23189437 atacacccaaatttattgggtgtaccatagaattt 23189471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 449 - 583
Target Start/End: Complemental strand, 40340565 - 40340430
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtacc 547  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||||||| |||||||| |    
T  40340565 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaattttatgacttggtgtaac 40340466  T
Q  548 gatacacccaaatttattgggtgtaccatataattt 583  Q
    |||||||||||||||||||||||||||||| |||||    
T  40340465 gatacacccaaatttattgggtgtaccatagaattt 40340430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 449 - 591
Target Start/End: Original strand, 31236859 - 31237001
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||       ||||||||||||||||||||||| || ||| |||||||    
T  31236859 tatataaaatttaattatcttagttgtcaatgatagaaaatagttatttttcttcaaaaaaacaactcatttattattaattttacgacttgatgtaccg 31236958  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcctttaa 591  Q
    ||||| ||||||||||||||||||||||| |||||||| ||||    
T  31236959 atacatccaaatttattgggtgtaccatagaatttgccattaa 31237001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 449 - 583
Target Start/End: Original strand, 42534663 - 42534797
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||| || || |||||||||||    
T  42534663 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattctacgacttggtgtaccg 42534762  T
Q  549 atacacccaaatttattgggtgtaccatataattt 583  Q
    |||||||||||||||| |||||||||||| |||||    
T  42534763 atacacccaaatttatagggtgtaccatagaattt 42534797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 452 - 584
Target Start/End: Original strand, 33001720 - 33001852
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  33001720 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 33001819  T
Q  552 cacccaaatttattgggtgtaccatataatttg 584  Q
    |||||||||| ||||||||||||||| ||||||    
T  33001820 cacccaaattcattgggtgtaccatagaatttg 33001852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 449 - 584
Target Start/End: Complemental strand, 16729861 - 16729726
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| || |||||||||||    
T  16729861 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaataactcatttattattaattttacgacttggtgtaccg 16729762  T
Q  549 atacacccaaatttattgggtgtaccatataatttg 584  Q
    ||||| ||||||||||||| ||||||||| ||||||    
T  16729761 atacatccaaatttattggatgtaccatagaatttg 16729726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 453 - 587
Target Start/End: Complemental strand, 10688526 - 10688392
Alignment:
Q  453 taaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgatac 552  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||       ||| ||||||||||||||||||| || |||||||||||||||    
T  10688526 taaaatttaattatcttagtcgtcaatgatagaaaataattatttttcttcaaaaaagcaaatcatttattattaattttacgacttggtgtaccgatac 10688427  T
Q  553 acccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||||||||| ||||||||| |||||||||    
T  10688426 acccaaatttattggatgtaccatagaatttgcct 10688392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 449 - 586
Target Start/End: Complemental strand, 41631355 - 41631218
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||        ||||| ||||||||||||||||| || |||||||||||    
T  41631355 tatataaaatttaattatcttagttgtcaatgaaagaaaataattatttttctttaaaaaaacaacttatttattattaattttacgacttggtgtaccg 41631256  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  41631255 atacacctaaatttattgggtgtaccataaaatttgcc 41631218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 452 - 587
Target Start/End: Original strand, 22798340 - 22798478
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaata---attatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    |||||||||||||||||||||||||||| ||||||||||   |||||||||||||       |||||||||||||||||||||||  | |||||||||||    
T  22798340 ataaaatttaattatcttagttgtcaatgatagaaaatagtaattatttttcttcaaaaaaacaactcatttattattaattttacaacttggtgtaccg 22798439  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  22798440 atacacccaaatttattgggtgtaccatagaatttgcct 22798478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 445 - 587
Target Start/End: Complemental strand, 3881972 - 3881831
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 544  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||| ||||||||||||||||||||||||||||    
T  3881972 ttgataaataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaat-aacttatttattattaattttatgatttggtgt 3881874  T
Q  545 accgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||| ||||||| ||||||||||  | |||||||||||||||||    
T  3881873 accaatacacctaaatttattgaatataccatataatttgcct 3881831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 449 - 583
Target Start/End: Original strand, 8068589 - 8068722
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||        |||||||| |||||||||||||||| |||||||| ||    
T  8068589 tatataaaatttaattatcttagttgtcaatgataaaaaataattatttttcttcaaaaaat-aactcattcattattaattttatgacttggtgtaacg 8068687  T
Q  549 atacacccaaatttattgggtgtaccatataattt 583  Q
    ||||||||||||||||||||||||||||| |||||    
T  8068688 atacacccaaatttattgggtgtaccatagaattt 8068722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 452 - 586
Target Start/End: Original strand, 13589137 - 13589271
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| |||||||||||||||||  | ||||||||||||||    
T  13589137 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacaacttggtgtaccgata 13589236  T
Q  552 cacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||| |||||||||||| || ||||||||    
T  13589237 cacccaaattcattgggtgtaccgtagaatttgcc 13589271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 452 - 587
Target Start/End: Original strand, 28770219 - 28770352
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||| ||||    
T  28770219 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaa-caactcatttattattaattttacgacttggtgtactgata 28770317  T
Q  552 cacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||||||||||| ||||||||||| |||||||||    
T  28770318 cacccaaatttatt-ggtgtaccatagaatttgcct 28770352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 452 - 585
Target Start/End: Complemental strand, 9530496 - 9530363
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||| ||||||||||||||||| || ||||||||||||||    
T  9530496 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaataactgatttattattaattttacgacttggtgtaccgata 9530397  T
Q  552 cacccaaatttattgggtgtaccatataatttgc 585  Q
    |||||||||| ||||| ||||||||| |||||||    
T  9530396 cacccaaattcattggatgtaccatagaatttgc 9530363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 452 - 586
Target Start/End: Complemental strand, 19126046 - 19125912
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        || |||||||||||||||||||||| ||| | ||||||||    
T  19126046 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaattcatttattattaattttatgacttgatataccgata 19125947  T
Q  552 cacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||| ||||||||||| ||||||||| ||||||||    
T  19125946 cacctaaatttattggatgtaccatagaatttgcc 19125912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 449 - 587
Target Start/End: Complemental strand, 4094795 - 4094657
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||| |||||||       ||||||||||||||||||||||| |||||| |||||||    
T  4094795 tatataaaatttaattatcttagttgccaatgatagaaaataattatctttcttcaaaaaaacaactcatttattattaattttacgatttgatgtaccg 4094696  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcct 587  Q
    | | | ||||||||||||| ||||| ||| |||||||||    
T  4094695 acatatccaaatttattggatgtacgatagaatttgcct 4094657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 452 - 586
Target Start/End: Complemental strand, 32624310 - 32624176
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||| ||||||  ||||||||||| |||||||||||||||||||||||        || | ||||||||||||||| | || ||||||||||||||    
T  32624310 ataaaattaaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaataattaatttattattaatttaacgaattggtgtaccgata 32624211  T
Q  552 cacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||||||||||||||||||| ||||||||    
T  32624210 cacccaaatttattgggtgtaccataaaatttgcc 32624176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 454 - 586
Target Start/End: Original strand, 22279491 - 22279622
Alignment:
Q  454 aaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgataca 553  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||       ||||| | |||||||||||||||  | ||||||||||| ||||    
T  22279491 aaaatttaattatcttagttgtcaatgatagaaaattattatttttcttcaaaaaaacaactgaattattattaattttacaacttggtgtaccggtaca 22279590  T
Q  554 cccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||| ||| ||||||||||| ||||||||    
T  22279591 cccaaattcatt-ggtgtaccatagaatttgcc 22279622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 452 - 547
Target Start/End: Original strand, 43411789 - 43411884
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtacc 547  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| |||||||||||||    
T  43411789 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaactcatttattattaattttacgatttggtgtacc 43411884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 452 - 572
Target Start/End: Original strand, 32063798 - 32063919
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtaccgat 550  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||            ||||||||||||||||||||||| ||||||||||||||||    
T  32063798 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttaaaaaaaaaaaacaactcatttattattaattttacgatttggtgtaccgat 32063897  T
Q  551 acacccaaatttattgggtgta 572  Q
    ||| ||||||||||||| ||||    
T  32063898 acatccaaatttattggatgta 32063919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 452 - 586
Target Start/End: Complemental strand, 11758752 - 11758612
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaa--ctcattta-----ttattaattttatgatttggtgt 544  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||        ||  ||||||||     |||||||||||| || |||||||    
T  11758752 ataaaatttaattatcttagttgtcaatgatagaaaataattatttt-cttcaaaaaaaaaaaactcatttaatttattattaattttacgacttggtgt 11758654  T
Q  545 accgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    || |||||||||||||||||||||||||||||| ||||||||    
T  11758653 actgatacacccaaatttattgggtgtaccatagaatttgcc 11758612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 452 - 586
Target Start/End: Original strand, 37963257 - 37963391
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||  ||||||||||| |||||||||||| ||||||||||        |||| ||||||||||||||| || | ||||||||||||||    
T  37963257 ataaaatttaattattatagttgtcaatgatagaaaataataatttttcttcaaaaaaataactaatttattattaatttaataaattggtgtaccgata 37963356  T
Q  552 cacccaaatttattgggtgtaccatataatttgcc 586  Q
    || |||||||||||||  |||| ||| ||||||||    
T  37963357 catccaaatttattggacgtactatagaatttgcc 37963391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 452 - 588
Target Start/End: Original strand, 34859707 - 34859841
Alignment:
Q  452 ataaaatttaattatcttagttgtc-aatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgat 550  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||||||||       ||| |||||||||| |||||||| || |||| ||||        
T  34859707 ataaaatttaattatcttagttgtcaaatgatagaaaataattatttttcttcaaaaaaacaattcatttattactaattttacgacttggcgtac---g 34859803  T
Q  551 acacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||||||||| ||||||||||||| ||||| ||||    
T  34859804 acacccaaatttaatgggtgtaccatagaatttacctt 34859841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 523 - 586
Target Start/End: Complemental strand, 28332183 - 28332120
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||  |||||||||||||| |||||| ||||||| ||| |||||||||| ||||||||    
T  28332183 tattaatttgttgatttggtgtaccaatacactcaaattttttgagtgtaccatagaatttgcc 28332120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 523 - 590
Target Start/End: Complemental strand, 34302708 - 34302642
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttta 590  Q
    ||||||||| | |||||| |||||| |||||| |||||| ||||||||||||||| ||||||||||||    
T  34302708 tattaatttaaggatttgatgtaccaatacactcaaatt-attgggtgtaccatagaatttgccttta 34302642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 457 - 583
Target Start/End: Complemental strand, 23408381 - 23408255
Alignment:
Q  457 atttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcattta-ttattaattttatgatttggtgtaccgatacacc 555  Q
    ||||||||||  || |||||||| |||||||| |  | |||||||||       |||||| |||| |||||||||| || ||||||||||||| |||||     
T  23408381 atttaattattgtaattgtcaataatagaaaacagatttttttcttcaaaaaaacaactcgtttacttattaatttaataatttggtgtaccggtacact 23408282  T
Q  556 caaatttattgggtgtaccatataattt 583  Q
    |||| || ||||||||||||||||||||    
T  23408281 caaa-ttgttgggtgtaccatataattt 23408255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 546 - 588
Target Start/End: Complemental strand, 27353461 - 27353419
Alignment:
Q  546 ccgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    |||||||||||||||||||||||| ||||||| ||||||||||    
T  27353461 ccgatacacccaaatttattgggtataccatagaatttgcctt 27353419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 523 - 588
Target Start/End: Original strand, 4618056 - 4618120
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    |||||||||  |||||||||||||| |||||| ||||||| || ||||||||||| ||||||||||    
T  4618056 tattaatttattgatttggtgtaccaatacactcaaattt-ttaggtgtaccataaaatttgcctt 4618120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 527 - 588
Target Start/End: Original strand, 5204967 - 5205027
Alignment:
Q  527 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||| |||||||||||||||| ||||| ||||||| ||| |||||||||| ||||||||||    
T  5204967 aatttgatgatttggtgtaccggtacactcaaattt-ttgagtgtaccatagaatttgcctt 5205027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 523 - 584
Target Start/End: Complemental strand, 6560888 - 6560828
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 584  Q
    ||||||||| | ||||||||||||| |||||| |||| ||||||||||||||||| ||||||    
T  6560888 tattaatttaaggatttggtgtaccaatacactcaaa-ttattgggtgtaccatagaatttg 6560828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 527 - 588
Target Start/End: Original strand, 40756891 - 40756951
Alignment:
Q  527 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||| |||||||||||||||| ||||| ||||||| ||| |||||||||| ||||||||||    
T  40756891 aatttgatgatttggtgtaccggtacactcaaattt-ttgagtgtaccatagaatttgcctt 40756951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 512 - 583
Target Start/End: Original strand, 43393088 - 43393159
Alignment:
Q  512 aactcattta-ttattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataattt 583  Q
    |||||||||| |||||| ||| || ||||||||||||| ||||| ||||||| ||| ||||||||||||||||    
T  43393088 aactcatttaattattattttaataatttggtgtaccggtacactcaaattt-ttgagtgtaccatataattt 43393159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 527 - 586
Target Start/End: Original strand, 5141017 - 5141075
Alignment:
Q  527 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||| |||||||||||||||| ||||| ||||||| ||| |||| ||||||||||||||    
T  5141017 aatttgatgatttggtgtaccggtacactcaaattt-ttgagtgtgccatataatttgcc 5141075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 499
Target Start/End: Complemental strand, 6335524 - 6335477
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 499  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  6335524 ataagatttaattattatagttgtcaatgatagaaaataattattttt 6335477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 499
Target Start/End: Complemental strand, 12336347 - 12336300
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 499  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  12336347 ataagatttaattattatagttgtcaatgatagaaaataattattttt 12336300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 13593554 - 13593601
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 499  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  13593554 ataagatttaattattatagttgtcaatgatagaaaataattattttt 13593601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 541 - 588
Target Start/End: Original strand, 32993688 - 32993735
Alignment:
Q  541 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    |||||||| ||||| ||||| |||||||||||||||| ||||||||||    
T  32993688 gtgtaccggtacactcaaatatattgggtgtaccatagaatttgcctt 32993735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 586
Target Start/End: Original strand, 43237697 - 43237759
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||| |  |||||||||||| |||||| |||||| ||||||||||||||| ||||||||    
T  43237697 tattaatttaagaatttggtgtaccaatacactcaaatt-attgggtgtaccatagaatttgcc 43237759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 445 - 499
Target Start/End: Original strand, 2011324 - 2011378
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattattttt 499  Q
    |||||| |||| ||||||||||  || |||||||| |||||||||||||||||||    
T  2011324 ttgataaataagatttaattattataattgtcaatgatagaaaataattattttt 2011378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 445 - 499
Target Start/End: Complemental strand, 9499368 - 9499314
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattattttt 499  Q
    |||||| |||| ||||||||||  || |||||||| |||||||||||||||||||    
T  9499368 ttgataaataagatttaattattataattgtcaatgatagaaaataattattttt 9499314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 445 - 499
Target Start/End: Complemental strand, 9499528 - 9499474
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattattttt 499  Q
    |||||| |||| ||||||||||  || |||||||| |||||||||||||||||||    
T  9499528 ttgataaataagatttaattattataattgtcaatgatagaaaataattattttt 9499474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 523 - 589
Target Start/End: Complemental strand, 27116524 - 27116459
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 589  Q
    |||||||||  ||||| |||||||| |||||| ||||||| |||||||||||||| ||||| |||||    
T  27116524 tattaatttgttgattgggtgtaccaatacactcaaattt-ttgggtgtaccataaaattttccttt 27116459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 523 - 588
Target Start/End: Complemental strand, 9589271 - 9589207
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||||| |||||||||||| || |||||| || || | |||||||||||||| ||||||||||    
T  9589271 tattaatttaatgatttggtgtgccaatacactcatatct-ttgggtgtaccatagaatttgcctt 9589207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 523 - 584
Target Start/End: Complemental strand, 21605710 - 21605650
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 584  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||||||||||||| ||||||    
T  21605710 tattaatttaaagatttggtgtaccaatacactcaaa-ttgttgggtgtaccatagaatttg 21605650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 541 - 586
Target Start/End: Original strand, 36339208 - 36339253
Alignment:
Q  541 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  36339208 gtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 36339253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 586
Target Start/End: Complemental strand, 36409969 - 36409906
Alignment:
Q  521 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||||| ||| |||||||||||||||||| |||| |  |||||||||||||| ||||||||    
T  36409969 attattaatttaatg-tttggtgtaccgatacactcaaaatg-ttgggtgtaccataaaatttgcc 36409906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 106; Significance: 1e-52; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 449 - 587
Target Start/End: Complemental strand, 36569785 - 36569647
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  36569785 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 36569686  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||||||||||||||||||||||||||||||||||||    
T  36569685 atacacccaaatttattgggtgtaccatataatttgcct 36569647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 449 - 588
Target Start/End: Complemental strand, 21515126 - 21514987
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||    
T  21515126 tatataaaatttaattatcttagttgtcaatgataaaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccg 21515027  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  21515026 atacacccaaatttattgggtgtaccatagaatttgcctt 21514987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 449 - 587
Target Start/End: Complemental strand, 45629245 - 45629107
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || || ||||||||    
T  45629245 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttagtgtaccg 45629146  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  45629145 atacacccaaatttattgggtgtaccatagaatttgcct 45629107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 449 - 588
Target Start/End: Complemental strand, 44998547 - 44998409
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||        |||||||||||||||||||||||||| ||||||||||     
T  44998547 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttctt-aaaaaaacaactcatttattattaattttatgacttggtgtacca 44998449  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  44998448 atacacccaaatttattgggtgtaccatagaatttgcctt 44998409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 449 - 587
Target Start/End: Original strand, 10779261 - 10779399
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  10779261 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 10779360  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||||||||||||| | ||||||| |||||||||    
T  10779361 atacacccaaatttattggatataccatagaatttgcct 10779399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 449 - 586
Target Start/End: Complemental strand, 24292114 - 24291978
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||     
T  24292114 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaa-caactcatttattattaattttacgacttggtgtacca 24292016  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  24292015 atacacccaaatttattgggtgtaccatagaatttgcc 24291978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 452 - 588
Target Start/End: Complemental strand, 33612657 - 33612521
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  33612657 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactaatttattattaattttacgacttggtgtaccgata 33612558  T
Q  552 cacccaaatttattgggtgtaccatataatttgcctt 588  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  33612557 cacccaaattcattgggtgtaccatagaatttgcctt 33612521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 449 - 587
Target Start/End: Original strand, 16004803 - 16004941
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||| | |||||    
T  16004803 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttgatataccg 16004902  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  16004903 atacacccaaatttattggatgtaccataaaatttgcct 16004941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 452 - 586
Target Start/End: Original strand, 48549939 - 48550073
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  48549939 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttctaaaaaacaactcatttattattaattttacgacttggtgtaccgata 48550038  T
Q  552 cacccaaatttattgggtgtaccatataatttgcc 586  Q
    || ||||||||||||||||||| ||| ||||||||    
T  48550039 catccaaatttattgggtgtacaatagaatttgcc 48550073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 452 - 583
Target Start/End: Original strand, 23639508 - 23639639
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  23639508 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgata 23639607  T
Q  552 cacccaaatttattgggtgtaccatataattt 583  Q
    ||| |||||||||||| ||||||||| |||||    
T  23639608 cactcaaatttattggatgtaccatagaattt 23639639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 452 - 586
Target Start/End: Original strand, 42244810 - 42244944
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||| ||||||||||    
T  42244810 ataaaatttaattctcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttgatgtaccgata 42244909  T
Q  552 cacccaaatttattgggtgtaccatataatttgcc 586  Q
    || ||||||||||||||||||||||| ||||||||    
T  42244910 catccaaatttattgggtgtaccatagaatttgcc 42244944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 449 - 588
Target Start/End: Original strand, 46222262 - 46222403
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn--caactcatttattattaattttatgatttggtgtac 546  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||         ||||||||||||||||||||||| || |||||||||    
T  46222262 tatataaaattaaattatcttagttgtcaatgatagaaaataattgtttttcttcaaaaaaaaacaactcatttattattaattttacgacttggtgtac 46222361  T
Q  547 cgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  46222362 cgatacacccaaatttattgggtgtaccatagaatttgcctt 46222403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 451 - 584
Target Start/End: Original strand, 46633875 - 46634009
Alignment:
Q  451 tataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtaccga 549  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||        ||||||||||||||||||||||| || ||||||||||||    
T  46633875 tataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaattttacgacttggtgtaccga 46633974  T
Q  550 tacacccaaatttattgggtgtaccatataatttg 584  Q
    |||| ||||||||||||||||||||||| ||||||    
T  46633975 tacatccaaatttattgggtgtaccataaaatttg 46634009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 449 - 588
Target Start/End: Complemental strand, 27967647 - 27967507
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatga-tttggtgtacc 547  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||| |||||||       ||||||||||||||||||||||| || || ||||||||    
T  27967647 tatataaaatttaattatcttagttgccaatgatagaaaataattatctttcttcaaaaaaacaactcatttattattaattttacgacttgggtgtacc 27967548  T
Q  548 gatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||||||||||||||||||||| |||| ||||||||||    
T  27967547 gatacacccaaatttattgggtgtaacatagaatttgcctt 27967507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 452 - 588
Target Start/End: Original strand, 46630918 - 46631055
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaa-ctcatttattattaattttatgatttggtgtaccgat 550  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        || ||||||||||||||||| || || |||||||||||||    
T  46630918 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaaactcatttattattaattgtacgacttggtgtaccgat 46631017  T
Q  551 acacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||||||||||||||||||||||| ||||| ||||    
T  46631018 acacccaaatttattgggtgtaccatagaattttcctt 46631055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 452 - 588
Target Start/End: Complemental strand, 54499708 - 54499573
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  54499708 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaa-caactcatttattattaattttacgacttggtgtaccgata 54499610  T
Q  552 cacccaaatttattgggtgtaccatataatttgcctt 588  Q
    || ||||||| | ||| ||||||||| ||||||||||    
T  54499609 catccaaattcactggatgtaccatagaatttgcctt 54499573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 449 - 588
Target Start/End: Original strand, 38955312 - 38955453
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||     
T  38955312 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtacca 38955411  T
Q  549 atacacccaaat--ttattgggtgtaccatataatttgcctt 588  Q
    |||||| |||||  || |||| ||||||||  ||||||||||    
T  38955412 atacactcaaattattgttggatgtaccatggaatttgcctt 38955453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 452 - 584
Target Start/End: Complemental strand, 27635873 - 27635741
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||||||       ||| ||||||||||||||||| | || ||||||||| ||||    
T  27635873 ataaaatttaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaacaattcatttattattaatttaacgacttggtgtactgata 27635774  T
Q  552 cacccaaatttattgggtgtaccatataatttg 584  Q
    ||||||||||||||| ||||||| || ||||||    
T  27635773 cacccaaatttattgagtgtaccgtagaatttg 27635741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 452 - 588
Target Start/End: Complemental strand, 52257266 - 52257130
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||||        ||||||||||||||||||||||| || ||| |  | |||||    
T  52257266 ataaaatttaattatcttagttatcaatgatagaaaataattatttttctttaaaaaaacaactcatttattattaattttacgacttgatacatcgata 52257167  T
Q  552 cacccaaatttattgggtgtaccatataatttgcctt 588  Q
    |||||||||||||||| | ||||||| ||||||||||    
T  52257166 cacccaaatttattggatataccatagaatttgcctt 52257130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 452 - 586
Target Start/End: Original strand, 54505838 - 54505973
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtaccgat 550  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||||||        ||||  ||||||||||||||| |  | |||||||||||||    
T  54505838 ataaaatttaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaaacaaccaatttattattaatttaacaaattggtgtaccgat 54505937  T
Q  551 acacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||||||||||||||||||||| ||||||||    
T  54505938 acacccaaatttattgggtgtaccatagaatttgcc 54505973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 445 - 588
Target Start/End: Original strand, 42680856 - 42680999
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 544  Q
    |||||| |||||||||||||||  |||||| |||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||| |    
T  42680856 ttgataaataaaatttaattattatagttgccaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtat 42680955  T
Q  545 accgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||| ||||| | ||||||| | | |||||| || ||||||||||    
T  42680956 accaatacatctaaatttagtagatgtaccgtagaatttgcctt 42680999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 445 - 586
Target Start/End: Complemental strand, 56016937 - 56016796
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 544  Q
    |||||| ||||||||||||||   ||||||||||| |||||||||||||||||||||||        |||||||||||||||||  | | || || ||||    
T  56016937 ttgataaataaaatttaattactatagttgtcaatgatagaaaataattatttttcttcaaaaaaataactcatttattattaacctaacgacttagtgt 56016838  T
Q  545 accgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||| |||||||||||| ||||||||| || |||||    
T  56016837 accgatacacacaaatttattggatgtaccataaaaattgcc 56016796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 452 - 586
Target Start/End: Complemental strand, 2526305 - 2526171
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgta-ccgat 550  Q
    |||||||||||||||||||||||||||| ||| |||||||||| ||||||||       ||||||||||||||||||||||| ||   | |  | || ||    
T  2526305 ataaaatttaattatcttagttgtcaatgatataaaataattacttttcttcaaaaaaacaactcatttattattaattttacga-ccgatacacccaat 2526207  T
Q  551 acacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||||||||||||||||||||| ||||||||    
T  2526206 acacccaaatttattgggtgtaccatagaatttgcc 2526171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 517 - 583
Target Start/End: Original strand, 23645231 - 23645297
Alignment:
Q  517 atttattattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataattt 583  Q
    ||||||||||||||||| || ||||||||||||||||| |||||||||||| ||||||||| |||||    
T  23645231 atttattattaattttacgacttggtgtaccgatacactcaaatttattggatgtaccatagaattt 23645297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 449 - 499
Target Start/End: Complemental strand, 45754518 - 45754468
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattattttt 499  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  45754518 tatataaaatttaattattttagttgtcaatgatagaaaataattattttt 45754468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 452 - 502
Target Start/End: Original strand, 42080600 - 42080650
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttctt 502  Q
    |||||||||||||||  ||||||||||| ||||||||||||||||||||||    
T  42080600 ataaaatttaattattatagttgtcaatgatagaaaataattatttttctt 42080650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 538 - 587
Target Start/End: Original strand, 10972959 - 10973008
Alignment:
Q  538 ttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||||||||||||||||||||||||||| | ||||||| |||||||||    
T  10972959 ttggtgtaccgatacacccaaatttattggatataccatagaatttgcct 10973008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 527 - 588
Target Start/End: Complemental strand, 12756060 - 12756000
Alignment:
Q  527 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||| |||||||||||||||||||||| ||||||| ||| |||||||||| ||||||||||    
T  12756060 aatttgatgatttggtgtaccgatacactcaaattt-ttgagtgtaccatagaatttgcctt 12756000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 511 - 586
Target Start/End: Original strand, 13548735 - 13548810
Alignment:
Q  511 caactcattta-ttattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||||| |||||||||| |||||||||||||||| ||||| ||||||| |||| || |||||| ||||||||    
T  13548735 caactcatttaattattaatttaatgatttggtgtaccggtacactcaaattt-ttggatgcaccataaaatttgcc 13548810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 472 - 562
Target Start/End: Complemental strand, 16601724 - 16601633
Alignment:
Q  472 ttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcattta-ttattaattttatgatttggtgtaccgatacacccaaattt 562  Q
    |||||||| ||| ||||||||| |||||||||       ||||||||||| |||||||||| | |||||||||||||| ||||| |||||||    
T  16601724 ttgtcaatgataaaaaataattctttttcttcaaaaatacaactcatttaattattaatttaacgatttggtgtaccggtacactcaaattt 16601633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 523 - 589
Target Start/End: Complemental strand, 36091121 - 36091056
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 589  Q
    ||||||||| ||||||||||||||| |||||| || || | |||| |||||||||||||||||||||    
T  36091121 tattaatttaatgatttggtgtaccaatacactcatatct-ttggatgtaccatataatttgccttt 36091056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 527 - 584
Target Start/End: Original strand, 44957267 - 44957323
Alignment:
Q  527 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 584  Q
    ||||| |||||||||||||||||||||| ||||||| ||| |||||||||| ||||||    
T  44957267 aatttgatgatttggtgtaccgatacactcaaattt-ttgagtgtaccatagaatttg 44957323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 523 - 587
Target Start/End: Complemental strand, 31681399 - 31681336
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||||||  |||||||||||||| ||||||| |||||| || ||||||||||| |||||||||    
T  31681399 tattaatttattgatttggtgtaccaatacaccaaaattt-ttaggtgtaccatagaatttgcct 31681336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 511 - 586
Target Start/End: Original strand, 53936843 - 53936919
Alignment:
Q  511 caactcatttat-tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||||  ||||||||| | || | ||||||||| ||||| ||||| |||||||||||||||| ||||||||    
T  53936843 caactcatttaactattaatttaaagaatgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcc 53936919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 586
Target Start/End: Complemental strand, 3716387 - 3716325
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||| | ||||||||||||| |||||| |||| ||||||| ||||||||| ||||||||    
T  3716387 tattaatttaaggatttggtgtaccaatacactcaaa-ttattggatgtaccatagaatttgcc 3716325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 586
Target Start/End: Original strand, 18425462 - 18425524
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||| ||||||||||||||| |||||| || || | |||||||||||||| ||||||||    
T  18425462 tattaatttaatgatttggtgtaccaatacactcatatct-ttgggtgtaccatagaatttgcc 18425524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 586
Target Start/End: Complemental strand, 30342887 - 30342825
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||| | ||||||||||||| |||||| |||||   |||||||||||||||||||||||    
T  30342887 tattaatttaaagatttggtgtaccaatacactcaaatgg-ttgggtgtaccatataatttgcc 30342825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 503
Target Start/End: Original strand, 39412442 - 39412493
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttc 503  Q
    |||| ||||||||||  ||||||||||| ||||||||||||| |||||||||    
T  39412442 ataagatttaattattatagttgtcaatgatagaaaataattttttttcttc 39412493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 527 - 586
Target Start/End: Original strand, 40438983 - 40439041
Alignment:
Q  527 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||| |||||||||||||||| ||||| ||||||| ||| |||||||||| ||||||||    
T  40438983 aatttaatgatttggtgtaccggtacactcaaattt-ttgagtgtaccatagaatttgcc 40439041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 541 - 588
Target Start/End: Complemental strand, 50607729 - 50607682
Alignment:
Q  541 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    |||||||| ||||| ||||| |||||||||||||||| ||||||||||    
T  50607729 gtgtaccggtacactcaaatatattgggtgtaccataaaatttgcctt 50607682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 523 - 589
Target Start/End: Original strand, 1414443 - 1414508
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 589  Q
    ||||||||| ||||||||||||||| |||||| ||||| | || ||||| ||||| |||||||||||    
T  1414443 tattaatttaatgatttggtgtaccaatacactcaaatct-ttaggtgtgccataaaatttgccttt 1414508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 541 - 583
Target Start/End: Original strand, 23059131 - 23059173
Alignment:
Q  541 gtgtaccgatacacccaaatttattgggtgtaccatataattt 583  Q
    |||||||||||||| ||||| |||||||||||||||| |||||    
T  23059131 gtgtaccgatacactcaaatatattgggtgtaccatagaattt 23059173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 527 - 589
Target Start/End: Original strand, 39103887 - 39103948
Alignment:
Q  527 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 589  Q
    ||||| ||||||| |||||||| ||||| ||||||| ||| |||||||||| |||||||||||    
T  39103887 aatttgatgatttagtgtaccggtacactcaaattt-ttgagtgtaccatagaatttgccttt 39103948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 521 - 587
Target Start/End: Original strand, 46216114 - 46216179
Alignment:
Q  521 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||||||||  ||||| |||||||| |||||| ||||||| |||||||||| ||| |||||||||    
T  46216114 attattaatttgttgattgggtgtaccaatacactcaaattt-ttgggtgtacaatagaatttgcct 46216179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 541 - 587
Target Start/End: Original strand, 48647383 - 48647429
Alignment:
Q  541 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||||| ||||| ||||| |||||||||||||||| |||||||||    
T  48647383 gtgtaccggtacactcaaatatattgggtgtaccatagaatttgcct 48647429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 588
Target Start/End: Complemental strand, 19842512 - 19842436
Alignment:
Q  512 aactcattta-ttattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    |||||||||| |||||||||| |  ||||||||||| | ||||| ||||||| |||| ||||||||| ||||||||||    
T  19842512 aactcatttaattattaatttaacaatttggtgtactggtacactcaaattt-ttggatgtaccatagaatttgcctt 19842436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 544 - 589
Target Start/End: Original strand, 24535850 - 24535895
Alignment:
Q  544 taccgatacacccaaatttattgggtgtaccatataatttgccttt 589  Q
    ||||| ||||| ||||| || |||||||||||||||||||||||||    
T  24535850 taccggtacactcaaatatagtgggtgtaccatataatttgccttt 24535895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 538 - 587
Target Start/End: Original strand, 33491954 - 33492003
Alignment:
Q  538 ttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||||| ||||| ||||| ||||||||||||| || |||||||||    
T  33491954 ttggtgtaccggtacactcaaatatattgggtgtaccgtagaatttgcct 33492003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 523 - 588
Target Start/End: Original strand, 34280573 - 34280637
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||||||||||||| || |||||||    
T  34280573 tattaatttaaggatttggtgtaccaatacactcaaa-ttgttgggtgtaccatagaacttgcctt 34280637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 541 - 586
Target Start/End: Original strand, 50383691 - 50383736
Alignment:
Q  541 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||| ||||| ||||| |||||| ||||||||||||||||||    
T  50383691 gtgtaccggtacactcaaatatattggatgtaccatataatttgcc 50383736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 523 - 588
Target Start/End: Original strand, 52324311 - 52324375
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||||| ||| |||||||||||| ||||| ||||  | |||||||||||||| ||||||||||    
T  52324311 tattaatttaatgctttggtgtaccggtacactcaaa-atgttgggtgtaccataaaatttgcctt 52324375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 5e-52; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 449 - 586
Target Start/End: Complemental strand, 24505260 - 24505123
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||||| |||||||||||    
T  24505260 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttatgacttggtgtaccg 24505161  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  24505160 atacacccaaatttattgggtgtaccatagaatttgcc 24505123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 452 - 587
Target Start/End: Complemental strand, 15090802 - 15090667
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||| |||||||||||||| |||||||||||||||||    
T  15090802 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatgtattattaattttacgatttggtgtaccgata 15090703  T
Q  552 cacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||||||||||||||||||||||| |||||||||    
T  15090702 cacccaaatttattgggtgtaccatagaatttgcct 15090667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 449 - 586
Target Start/End: Complemental strand, 47220092 - 47219956
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| ||||||||||||||    
T  47220092 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaa-aactcatttattattaattttacgatttggtgtaccg 47219994  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  47219993 atacacccaaatttattgggtgtaccatagaatttgcc 47219956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 445 - 588
Target Start/End: Complemental strand, 1282326 - 1282183
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 544  Q
    |||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || || ||||    
T  1282326 ttgataaataaaatttaattatcttagttctcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttagtgt 1282227  T
Q  545 accgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  1282226 accgatacacccaaatttattgggtgtaccatagaatttgcctt 1282183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 445 - 587
Target Start/End: Original strand, 45197070 - 45197212
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 544  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || || ||||    
T  45197070 ttgataaataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttagtgt 45197169  T
Q  545 accgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||| ||||||||||||||||||||||| |||||||||    
T  45197170 accgatacatccaaatttattgggtgtaccatagaatttgcct 45197212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 454 - 586
Target Start/End: Complemental strand, 3062034 - 3061902
Alignment:
Q  454 aaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgataca 553  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||        |||||||||||||||||||||| || ||||||||||||||||    
T  3062034 aaaatttaattatcttagttgtcaatgatagaaaataattattttttttcaaaaaaataactcatttattattaattttacgacttggtgtaccgataca 3061935  T
Q  554 cccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||||||||||||||||||||||||||    
T  3061934 cccaaatttattgggtgtaccatataatttgcc 3061902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 452 - 586
Target Start/End: Complemental strand, 25867039 - 25866905
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||       ||||||||||||||||||||||| || ||||||||| ||||    
T  25867039 ataaaatttaattatcttagttgtcaatgataaaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtactgata 25866940  T
Q  552 cacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||||||||||||||||||| ||||||||    
T  25866939 cacccaaatttattgggtgtaccatagaatttgcc 25866905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 452 - 586
Target Start/End: Original strand, 32186698 - 32186832
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  32186698 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttctaaaaaacaactcatttattattaattttacgacttggtgtaccgata 32186797  T
Q  552 cacccaaatttattgggtgtaccatataatttgcc 586  Q
    || ||||||||||||||||||| ||| ||||||||    
T  32186798 catccaaatttattgggtgtacaatagaatttgcc 32186832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 452 - 586
Target Start/End: Original strand, 41715414 - 41715548
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  41715414 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttctaaaaaacaactcatttattattaattttacgacttggtgtaccgata 41715513  T
Q  552 cacccaaatttattgggtgtaccatataatttgcc 586  Q
    || ||||||||||||||||||| ||| ||||||||    
T  41715514 catccaaatttattgggtgtacaatagaatttgcc 41715548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 452 - 587
Target Start/End: Original strand, 2038368 - 2038503
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  2038368 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 2038467  T
Q  552 cacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||||||| ||||| ||||||||| |||||||||    
T  2038468 cacccaaattcattggatgtaccataaaatttgcct 2038503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 449 - 588
Target Start/End: Complemental strand, 42039439 - 42039300
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||  | |||||||| ||    
T  42039439 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacaacttggtgtatcg 42039340  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||||||||||||||| |||||| || ||||||||||    
T  42039339 atacacccaaatttattggatgtaccgtagaatttgcctt 42039300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 449 - 587
Target Start/End: Complemental strand, 18922713 - 18922575
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || |||||||||||    
T  18922713 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaataaaacaactaatttattattaattttacgacttggtgtaccg 18922614  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||||||||||||  ||||| ||| |||||||||    
T  18922613 atacacccaaatttattgaatgtactatagaatttgcct 18922575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 452 - 594
Target Start/End: Original strand, 42902659 - 42902801
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||| ||||||||||||||||| || |||||||||| |||    
T  42902659 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaacttatttattattaattttacgacttggtgtaccaata 42902758  T
Q  552 cacccaaatttattgggtgtaccatataatttgcctttaataa 594  Q
    |||||||||||||| ||||||||||| |||||||||| |||||    
T  42902759 cacccaaatttattaggtgtaccatagaatttgccttaaataa 42902801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 452 - 586
Target Start/End: Original strand, 47069234 - 47069368
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       || | ||||||||||||||||||||| ||||||||||||||    
T  47069234 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacatcccatttattattaattttatgacttggtgtaccgata 47069333  T
Q  552 cacccaaatttattgggtgtaccatataatttgcc 586  Q
    || ||||||||||||| ||||||||| ||||||||    
T  47069334 catccaaatttattggatgtaccatagaatttgcc 47069368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 452 - 587
Target Start/End: Original strand, 40947246 - 40947381
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || || ||||| | |||    
T  40947246 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgaattagtgtaacaata 40947345  T
Q  552 cacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||||||||||||| ||||||||| |||||||||    
T  40947346 cacccaaatttattggatgtaccatagaatttgcct 40947381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 452 - 586
Target Start/End: Original strand, 27130816 - 27130950
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtaccgat 550  Q
    ||||||||||||||| |||||||| ||| |||||||||||||||||||||||        |||||||||||||||||||||||||| ||||||||||| |    
T  27130816 ataaaatttaattatattagttgt-aatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaattttatgacttggtgtaccggt 27130914  T
Q  551 acacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||||||||||||||||||||| ||||||||    
T  27130915 acacccaaatttattgggtgtaccatagaatttgcc 27130950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 452 - 589
Target Start/End: Original strand, 7574387 - 7574524
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||| | |  ||||||||||||||    
T  7574387 ataaaatttaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactaatttattattaatttaacggattggtgtaccgata 7574486  T
Q  552 cacccaaatttattgggtgtaccatataatttgccttt 589  Q
    || ||||||||||||| ||||||||| |||||||||||    
T  7574487 catccaaatttattggatgtaccatagaatttgccttt 7574524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 454 - 586
Target Start/End: Complemental strand, 17334870 - 17334739
Alignment:
Q  454 aaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgataca 553  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||       ||||| | |||||||||||||||  | ||||||||||| ||||    
T  17334870 aaaatttaattatcttagttgtcaatgatagaaaattattatttttcttcaaaaaaacaactgaattattattaattttacaacttggtgtaccggtaca 17334771  T
Q  554 cccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||| ||| ||||||||||| ||||||||    
T  17334770 cccaaattcatt-ggtgtaccatagaatttgcc 17334739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 449 - 533
Target Start/End: Complemental strand, 9923207 - 9923123
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaatttta 533  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||    
T  9923207 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaatttta 9923123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 452 - 584
Target Start/End: Original strand, 33704821 - 33704952
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||        ||||||||||||||||||||||| || ||| | ||||||||    
T  33704821 ataaaatttaattatcttagttgccaatgatagaaaataattatttttctt-aaaaaaacaactcatttattattaattttacgacttgatataccgata 33704919  T
Q  552 cacccaaatttattgggtgtaccatataatttg 584  Q
    ||   ||||||||||| ||||||||| ||||||    
T  33704920 catataaatttattggatgtaccatagaatttg 33704952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 452 - 547
Target Start/End: Complemental strand, 39444099 - 39444004
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtacc 547  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||    
T  39444099 ataaaatataattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtacc 39444004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 457 - 589
Target Start/End: Complemental strand, 13806491 - 13806359
Alignment:
Q  457 atttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcattta-ttattaattttatgatttggtgtaccgatacacc 555  Q
    ||||||||||  || |||||||| |||||||| || |||||||||||       |||||| |||| |||||||||| || |||||||||| || || ||     
T  13806491 atttaattattgtaattgtcaatgatagaaaacaaatatttttcttcaaaaaaacaactcgtttaattattaatttaataatttggtgtatcggtatact 13806392  T
Q  556 caaatttattgggtgtaccatataatttgccttt 589  Q
    |||||| ||||| |||||||||||||||||||||    
T  13806391 caaatt-attggatgtaccatataatttgccttt 13806359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 511 - 586
Target Start/End: Original strand, 9682357 - 9682432
Alignment:
Q  511 caactcattta-ttattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||||| |||||||||| |||||||||||||||| ||||| ||||||| |||| || |||||| ||||||||    
T  9682357 caactcatttaattattaatttaatgatttggtgtaccggtacactcaaattt-ttggatgcaccataaaatttgcc 9682432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 457 - 587
Target Start/End: Complemental strand, 1343150 - 1343018
Alignment:
Q  457 atttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn--caactcattta-ttattaattttatgatttggtgtaccgataca 553  Q
    ||||||||||  || |||||||| |||||||| ||||||||||||||         |||||| |||| ||||| |||| || ||||||||||||| ||||    
T  1343150 atttaattattgtaattgtcaatgatagaaaacaattatttttcttcaaaaaaaaacaactcgtttaattattgatttaataatttggtgtaccggtaca 1343051  T
Q  554 cccaaatttattgggtgtaccatataatttgcct 587  Q
    | |||| || |||||||||||||| |||||||||    
T  1343050 ctcaaa-ttgttgggtgtaccatagaatttgcct 1343018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 586
Target Start/End: Original strand, 6791799 - 6791844
Alignment:
Q  541 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||    
T  6791799 gtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 6791844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 518 - 591
Target Start/End: Complemental strand, 31743367 - 31743295
Alignment:
Q  518 tttattattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctttaa 591  Q
    |||| ||||||||| ||||||||||| || | ||||| ||||||| ||| |||||||||| |||||||||||||    
T  31743367 tttaatattaatttgatgatttggtgcactggtacactcaaattt-ttgagtgtaccatagaatttgcctttaa 31743295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 527 - 588
Target Start/End: Complemental strand, 31760051 - 31759991
Alignment:
Q  527 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||| |||||||||||||||| ||||| ||||||| ||| |||||||||| ||||||||||    
T  31760051 aatttgatgatttggtgtaccggtacactcaaattt-ttgagtgtaccataaaatttgcctt 31759991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 523 - 587
Target Start/End: Original strand, 41913438 - 41913501
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||| |||||||||||||||||||    
T  41913438 tattaatttaaggatttggtgtaccaatacactcaaa-ttgttggatgtaccatataatttgcct 41913501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 541 - 589
Target Start/End: Original strand, 41968784 - 41968832
Alignment:
Q  541 gtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 589  Q
    |||||||||||||| ||||| |||| ||||||||||| |||||||||||    
T  41968784 gtgtaccgatacactcaaatatattaggtgtaccatagaatttgccttt 41968832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 523 - 587
Target Start/End: Original strand, 45857818 - 45857881
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||| ||||||||||||||| |||||| || || | |||||||||||||| |||||||||    
T  45857818 tattaatttaatgatttggtgtaccaatacactcatatct-ttgggtgtaccatagaatttgcct 45857881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 541 - 597
Target Start/End: Original strand, 47369581 - 47369637
Alignment:
Q  541 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcctttaataatat 597  Q
    ||||| || ||||| ||||| |||||||||||||||| |||||||||||||| ||||    
T  47369581 gtgtatcggtacactcaaatatattgggtgtaccatagaatttgcctttaattatat 47369637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 586
Target Start/End: Complemental strand, 18990153 - 18990091
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||  |||||||||||||| |||||| ||||||| || ||||||||||| ||||||||    
T  18990153 tattaatttattgatttggtgtaccaatacactcaaattt-tttggtgtaccatagaatttgcc 18990091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 527 - 586
Target Start/End: Original strand, 21920040 - 21920098
Alignment:
Q  527 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||| |||||||||||||||| ||||| ||||||| ||| |||||||||| ||||||||    
T  21920040 aatttgatgatttggtgtaccggtacactcaaattt-ttgagtgtaccatagaatttgcc 21920098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 27427405 - 27427452
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 499  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  27427405 ataagatttaattattatagttgtcaatgatagaaaataattattttt 27427452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 541 - 584
Target Start/End: Original strand, 36533409 - 36533452
Alignment:
Q  541 gtgtaccgatacacccaaatttattgggtgtaccatataatttg 584  Q
    |||||||| ||||| ||||| |||||||||||||||||||||||    
T  36533409 gtgtaccggtacactcaaatatattgggtgtaccatataatttg 36533452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 586
Target Start/End: Original strand, 44964165 - 44964227
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||| |||||||| |||||| |||||| ||||| | || ||||||||||||||||||||    
T  44964165 tattaatttaatgatttgttgtaccaatacactcaaatct-ttaggtgtaccatataatttgcc 44964227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 540 - 586
Target Start/End: Complemental strand, 17340839 - 17340794
Alignment:
Q  540 ggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||||||||||||||| ||| ||||||||||| ||||||||    
T  17340839 ggtgtaccgatacacccaaattcatt-ggtgtaccatagaatttgcc 17340794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 541 - 587
Target Start/End: Original strand, 41771770 - 41771816
Alignment:
Q  541 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||||| ||||| ||||| |||||||||||||||| |||||||||    
T  41771770 gtgtaccggtacactcaaatatattgggtgtaccataaaatttgcct 41771816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 541 - 583
Target Start/End: Original strand, 46291461 - 46291503
Alignment:
Q  541 gtgtaccgatacacccaaatttattgggtgtaccatataattt 583  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||    
T  46291461 gtgtaccggtacactcaaatatattgggtgtaccatataattt 46291503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 527 - 588
Target Start/End: Complemental strand, 17833989 - 17833929
Alignment:
Q  527 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||| |||||||||||| ||| ||||| ||||||| ||| |||||||||| ||||||||||    
T  17833989 aatttgatgatttggtgtgccggtacactcaaattt-ttgagtgtaccatagaatttgcctt 17833929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 535 - 588
Target Start/End: Original strand, 27800384 - 27800436
Alignment:
Q  535 gatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    |||||||||||||| ||||| ||||||| |||| ||||||||| ||||||||||    
T  27800384 gatttggtgtaccggtacactcaaattt-ttggatgtaccatagaatttgcctt 27800436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 523 - 588
Target Start/End: Original strand, 30624067 - 30624131
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||||| |  |||||||||||| |||||| |||||| ||||||||||||||| || |||||||    
T  30624067 tattaatttaaaaatttggtgtaccaatacactcaaatt-attgggtgtaccatagaacttgcctt 30624131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 452 - 545
Target Start/End: Complemental strand, 31311480 - 31311386
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcattt-attattaattttatgatttggtgta 545  Q
    |||| ||||||||||  || |||||||| ||||||||||||| |||||||||       |||||||||| ||||||||||| | |||||| ||||    
T  31311480 ataagatttaattattataattgtcaatgatagaaaataattctttttcttcaaaaaaacaactcatttaattattaatttaacgatttgatgta 31311386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 3e-50; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 449 - 587
Target Start/End: Complemental strand, 33830667 - 33830529
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||       |||||||||||||||||||||||||| |||||||||||    
T  33830667 tatataaaatttaattatcttagttgtcaatgatagaaaataattattttttttcaaaaaaacaactcatttattattaattttatgacttggtgtaccg 33830568  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  33830567 atacacccaaatttattgggtgtaccatagaatttgcct 33830529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 452 - 586
Target Start/End: Complemental strand, 45927354 - 45927220
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| |||||||||||||||||    
T  45927354 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccgata 45927255  T
Q  552 cacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||||||||||||||||||| ||||||||    
T  45927254 cacccaaatttattgggtgtaccataaaatttgcc 45927220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 449 - 588
Target Start/End: Complemental strand, 2667621 - 2667482
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||       |||||||||||||||||||||||||| |||||||||||    
T  2667621 tatataaaatttaattatcttagttgtcaatgatagaaaataataatttttcttcaaaaaaacaactcatttattattaattttatgacttggtgtaccg 2667522  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    |||||||| |||||||||||||||||||| ||||||||||    
T  2667521 atacaccctaatttattgggtgtaccatagaatttgcctt 2667482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 449 - 588
Target Start/End: Original strand, 52782429 - 52782568
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  52782429 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 52782528  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  52782529 atacacccaaatttattggatgtaccatagaatttgcctt 52782568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 449 - 590
Target Start/End: Complemental strand, 53186141 - 53186000
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||    
T  53186141 tatataaaatttaattatcttagttgtcaatgataaaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgtaccg 53186042  T
Q  549 atacacccaaatttattgggtgtaccatataatttgccttta 590  Q
    ||||||||||||||||| |||||||| || ||||||||||||    
T  53186041 atacacccaaatttatttggtgtaccgtagaatttgccttta 53186000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 445 - 587
Target Start/End: Original strand, 9322699 - 9322841
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 544  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||       |||||||||||||||| |||||| || |||||||    
T  9322699 ttgatatataaaatttaattatcttagttgtcaatgatataaaataattatttttcttcaaaaaaacaactcatttattatttattttacgacttggtgt 9322798  T
Q  545 accgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||||| ||||||||||||||||||||| |||||||||    
T  9322799 accgatacaccaaaatttattgggtgtaccatagaatttgcct 9322841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 449 - 591
Target Start/End: Original strand, 44500385 - 44500527
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||| |||||||       ||||||||||||||||||||||| || |||||||||||    
T  44500385 tatataaaatttaattatcttagttgccaatgatagaaaataattatctttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 44500484  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcctttaa 591  Q
    || |||||||||||||||||||||||||| |||||||||||||    
T  44500485 atgcacccaaatttattgggtgtaccatagaatttgcctttaa 44500527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 449 - 587
Target Start/End: Complemental strand, 44962739 - 44962601
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||     
T  44962739 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtacca 44962640  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||||||||||||| ||||||||| |||||||||    
T  44962639 atacacccaaatttattggatgtaccatagaatttgcct 44962601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 449 - 586
Target Start/End: Complemental strand, 37567355 - 37567218
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  37567355 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 37567256  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||| |||||||||||||||||||| || ||||||||    
T  37567255 atacatccaaatttattgggtgtaccgtagaatttgcc 37567218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 452 - 589
Target Start/End: Complemental strand, 54009039 - 54008902
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  54009039 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 54008940  T
Q  552 cacccaaatttattgggtgtaccatataatttgccttt 589  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  54008939 cacccaaattcattgggtgtaccatagaatttgccttt 54008902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 451 - 587
Target Start/End: Original strand, 48925683 - 48925819
Alignment:
Q  451 tataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgat 550  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||||    
T  48925683 tataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgat 48925782  T
Q  551 acacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||  |||||||||||||||||||||| |||||||||    
T  48925783 acattcaaatttattgggtgtaccatagaatttgcct 48925819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 452 - 586
Target Start/End: Complemental strand, 32720119 - 32719985
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    ||||||||||||||||||| |||| ||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  32720119 ataaaatttaattatcttaattgttaatgatagaaaataattatttttcttctaaaaaacaactcatttattattaattttacgacttggtgtaccgata 32720020  T
Q  552 cacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||||||||||||||||||| ||||||||    
T  32720019 cacccaaatttattgggtgtaccatagaatttgcc 32719985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 452 - 588
Target Start/End: Complemental strand, 1326735 - 1326599
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| |||||||||||||||||  ||||||||||||||||    
T  1326735 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacaatttggtgtaccgata 1326636  T
Q  552 cacccaaatttattgggtgtaccatataatttgcctt 588  Q
    || ||||||| ||||||||||||||| ||||||||||    
T  1326635 catccaaattcattgggtgtaccatagaatttgcctt 1326599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 449 - 600
Target Start/End: Original strand, 49951195 - 49951346
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||| ||| |||    
T  49951195 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttgatgtgccg 49951294  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcctttaataatatgtg 600  Q
    ||||| ||||||||||| ||||||||||| |||||||| ||| | |||||||    
T  49951295 atacatccaaatttattaggtgtaccatagaatttgccattatttatatgtg 49951346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 452 - 587
Target Start/End: Original strand, 55365647 - 55365783
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnnc-aactcatttattattaattttatgatttggtgtaccgat 550  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||         |||||||||||||||||||||| || |||||||||||||    
T  55365647 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaataactcatttattattaattttacgacttggtgtaccgat 55365746  T
Q  551 acacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  55365747 acacccaaatttattggatgtaccatagaatttgcct 55365783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 452 - 586
Target Start/End: Original strand, 48389031 - 48389166
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtaccgat 550  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        ||||||||||||||||||||||| || |||||||| ||||    
T  48389031 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaattttacgacttggtgtatcgat 48389130  T
Q  551 acacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||| ||||||||||||||||||||||| ||||||||    
T  48389131 acatccaaatttattgggtgtaccatagaatttgcc 48389166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 449 - 587
Target Start/End: Complemental strand, 346827 - 346689
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    |||||| ||||||||||||||||||||| || |||||||||||||||||||||||       |||||||||||||||||||||||  | || ||||||||    
T  346827 tatatacaatttaattatcttagttgtcgatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttaccacttagtgtaccg 346728  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  346727 atacatccaaatttattgggtgtaccatagaatttgcct 346689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 452 - 586
Target Start/End: Original strand, 50560634 - 50560768
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||    
T  50560634 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgata 50560733  T
Q  552 cacccaaatttattgggtgtaccatataatttgcc 586  Q
    || | ||||||||||||| ||||||| || |||||    
T  50560734 catctaaatttattgggtttaccatagaacttgcc 50560768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 449 - 573
Target Start/End: Complemental strand, 53376728 - 53376604
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||| |    
T  53376728 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgaattggtgtactg 53376629  T
Q  549 atacacccaaatttattgggtgtac 573  Q
    ||||| ||||||||||||| |||||    
T  53376628 atacatccaaatttattggatgtac 53376604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 452 - 589
Target Start/End: Original strand, 26409893 - 26410029
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||  ||||| ||||| |||||||||||||||||||||||       ||||| ||||||||||||||| |||| ||||||||||||||    
T  26409893 ataaaatttaattattatagtt-tcaatgatagaaaataattatttttcttcaaaaaaacaactaatttattattaatttaatgaattggtgtaccgata 26409991  T
Q  552 cacccaaatttattgggtgtaccatataatttgccttt 589  Q
    |||||||||||||||| ||||||||| |||||||||||    
T  26409992 cacccaaatttattggatgtaccataaaatttgccttt 26410029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 445 - 557
Target Start/End: Complemental strand, 14460322 - 14460210
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 544  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||| |||||||||||||||| || |||||||    
T  14460322 ttgatatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcttttattattaattttacgacttggtgt 14460223  T
Q  545 accgatacaccca 557  Q
    |||||||||||||    
T  14460222 accgatacaccca 14460210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 452 - 586
Target Start/End: Original strand, 7157311 - 7157445
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || |||||| | | ||     
T  7157311 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgcatcaatg 7157410  T
Q  552 cacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||| ||||||||||||||| ||||||||    
T  7157411 cacccaaattcattgggtgtaccatagaatttgcc 7157445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 445 - 547
Target Start/End: Original strand, 36019682 - 36019784
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 544  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| ||||||||||    
T  36019682 ttgatagataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgatttggtgt 36019781  T
Q  545 acc 547  Q
    |||    
T  36019782 acc 36019784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 452 - 584
Target Start/End: Complemental strand, 50465606 - 50465473
Alignment:
Q  452 ataaaatttaattatcttagttgtcaa-tcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgat 550  Q
    ||||||||||||||||||||||||||| | || ||||||||||||||||| ||       |||||||||||||||||||||||  | |||||||||||||    
T  50465606 ataaaatttaattatcttagttgtcaaatgatggaaaataattatttttcctcaaaaaaacaactcatttattattaattttacaacttggtgtaccgat 50465507  T
Q  551 acacccaaatttattgggtgtaccatataatttg 584  Q
    ||||||||||||||||  ||||||||| ||||||    
T  50465506 acacccaaatttattgaatgtaccataaaatttg 50465473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 449 - 547
Target Start/End: Complemental strand, 48990449 - 48990351
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtacc 547  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||  | ||||||||||    
T  48990449 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacaacttggtgtacc 48990351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 511 - 588
Target Start/End: Original strand, 52788755 - 52788832
Alignment:
Q  511 caactcatttattattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  52788755 caactcatttattattaattttacgacttggtgtaccgatacacccaaatttattggatgtaccatagaatttgcctt 52788832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 452 - 587
Target Start/End: Original strand, 35320633 - 35320770
Alignment:
Q  452 ataaaatttaattatcttagttgtcaa-tcatagaaaataattatttttctt-cnnnnnnncaactcatttattattaattttatgatttggtgtaccga 549  Q
    |||||||||||||||| |||||||||| | ||||||||||||||||||| || |       ||| |||||||||| |||| ||| || ||||||||||||    
T  35320633 ataaaatttaattatcgtagttgtcaaatgatagaaaataattatttttttttcaaaaaaacaattcatttattactaatattacgacttggtgtaccga 35320732  T
Q  550 tacacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||||||||||| ||||||||||||| |||||||||    
T  35320733 tacacccaaatttagtgggtgtaccatagaatttgcct 35320770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 511 - 587
Target Start/End: Complemental strand, 54011217 - 54011141
Alignment:
Q  511 caactcatttattattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  54011217 caactcatttattattaattttacgacttggtgtaccgatacacccaaatttattgggtgtactatagaatttgcct 54011141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 449 - 547
Target Start/End: Complemental strand, 51235658 - 51235558
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttc--nnnnnnncaactcatttattattaattttatgatttggtgtac 546  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||          |||||||||||||||||||||| || |||||||||    
T  51235658 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaaaactcatttattattaattttacgacttggtgtac 51235559  T
Q  547 c 547  Q
    |    
T  51235558 c 51235558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 445 - 587
Target Start/End: Complemental strand, 42622752 - 42622608
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcattta--ttattaattttatgatttggt 542  Q
    |||||| |||| |||||| |||  || ||||||||  ||||||||||||| ||||||||       |||||||||||  |||||||||| | ||||||||    
T  42622752 ttgataaataagatttaaatattataattgtcaatgctagaaaataattaattttcttcagaaaaacaactcatttaatttattaatttaacgatttggt 42622653  T
Q  543 gtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||| | ||||| ||| ||| |||||||||||||| |||||||||    
T  42622652 gtactggtacactcaatttttttgggtgtaccatagaatttgcct 42622608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 452 - 503
Target Start/End: Complemental strand, 7347224 - 7347173
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttc 503  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  7347224 ataaaatttaattatcttagttgtcaatgatagaaagtaattatttttcttc 7347173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 445 - 502
Target Start/End: Complemental strand, 881865 - 881808
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttctt 502  Q
    |||||| |||||||||||||||  ||||||||||| ||||||||||||||||||||||    
T  881865 ttgataaataaaatttaattattatagttgtcaatgatagaaaataattatttttctt 881808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 452 - 594
Target Start/End: Original strand, 23043625 - 23043766
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||  ||||||||||| |||||||||||||||||||   |       ||||||||||||||||||| | |  | ||| |||||| |||    
T  23043625 ataaaatttaattattatagttgtcaatgatagaaaataattattttt-gacaaaaaaacaactcatttattattaatgtaacaacttgatgtaccaata 23043723  T
Q  552 cacccaaatttattgggtgtaccatataatttgcctttaataa 594  Q
    || | ||||||||||   ||||||||||||||||||| |||||    
T  23043724 catcaaaatttattgaaagtaccatataatttgccttaaataa 23043766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 511 - 587
Target Start/End: Original strand, 26885302 - 26885379
Alignment:
Q  511 caactcatttat-tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||||||||  ||||||||| | || ||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  26885302 caactcatttaactattaatttaaagaattggtgtaccgatacactcaaatatattgggtgtaccataaaatttgcct 26885379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 523 - 586
Target Start/End: Original strand, 38785426 - 38785488
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||| | ||||||||||||| |||||| |||||| ||||||||||||||||||||||||    
T  38785426 tattaatttaaggatttggtgtaccaatacactcaaatt-attgggtgtaccatataatttgcc 38785488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 523 - 587
Target Start/End: Complemental strand, 11140309 - 11140246
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||| | ||||||||||||| |||||| |||||| ||||||||||||||| |||||||||    
T  11140309 tattaatttaaggatttggtgtaccaatacactcaaatt-attgggtgtaccatagaatttgcct 11140246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 512 - 583
Target Start/End: Complemental strand, 31479630 - 31479559
Alignment:
Q  512 aactcattta-ttattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataattt 583  Q
    |||||||||| |||||||||| |  ||||||||||||||||||| ||||||| || |||||||||||||||||    
T  31479630 aactcatttaattattaatttaacaatttggtgtaccgatacactcaaattt-ttaggtgtaccatataattt 31479559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 523 - 586
Target Start/End: Original strand, 42364271 - 42364333
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||| | ||||||||||||| |||||| |||| ||||||||||||||||| ||||||||    
T  42364271 tattaatttaaggatttggtgtaccaatacactcaaa-ttattgggtgtaccatagaatttgcc 42364333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 523 - 589
Target Start/End: Original strand, 876566 - 876631
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 589  Q
    ||||||||| | ||||||||||||| ||||||  |||||  ||||||||||||||||||||||||||    
T  876566 tattaatttaaggatttggtgtaccaatacacttaaattg-ttgggtgtaccatataatttgccttt 876631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 511 - 587
Target Start/End: Complemental strand, 9506979 - 9506902
Alignment:
Q  511 caactcatttat-tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||||||||  ||||||||| | || ||||||||||||| ||| ||||| ||||||||||| |||| |||||||||    
T  9506979 caactcatttaactattaatttaaagaattggtgtaccgatgcactcaaatatattgggtgtatcatagaatttgcct 9506902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 511 - 587
Target Start/End: Complemental strand, 9514954 - 9514877
Alignment:
Q  511 caactcatttat-tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||||||||  ||||||||| | || ||||||||||||| ||| ||||| ||||||||||| |||| |||||||||    
T  9514954 caactcatttaactattaatttaaagaattggtgtaccgatgcactcaaatatattgggtgtatcatagaatttgcct 9514877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 511 - 587
Target Start/End: Original strand, 25482574 - 25482651
Alignment:
Q  511 caactcatttat-tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||||||||  ||||||||| | || | ||||||||||||||| ||||| |||| |||||||| ||||||||||||    
T  25482574 caactcatttaactattaatttaaagaataggtgtaccgatacactcaaatatattaggtgtaccttataatttgcct 25482651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 523 - 588
Target Start/End: Complemental strand, 29491726 - 29491661
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||||| | || | ||||||||| ||||| ||||| |||||||||||||||| ||||||||||    
T  29491726 tattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcctt 29491661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 523 - 588
Target Start/End: Original strand, 42622193 - 42622258
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||||| | || | ||||||||| ||||| ||||| |||||||||||||||| ||||||||||    
T  42622193 tattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccataaaatttgcctt 42622258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 523 - 587
Target Start/End: Complemental strand, 42067641 - 42067578
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||||||||||||| |||||||||    
T  42067641 tattaatttaaggatttggtgtaccaatacactcaaa-ttgttgggtgtaccatagaatttgcct 42067578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 534 - 586
Target Start/End: Original strand, 43715103 - 43715154
Alignment:
Q  534 tgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||||||| |||||||||||||| |||| ||||||||| ||||||||    
T  43715103 tgatttggtgtaccaatacacccaaattt-ttggatgtaccatagaatttgcc 43715154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 521 - 589
Target Start/End: Original strand, 52776795 - 52776862
Alignment:
Q  521 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 589  Q
    ||||||||||| || ||||||||||||| ||||| |||| ||||||||||||| ||| ||||| |||||    
T  52776795 attattaatttaataatttggtgtaccggtacactcaaa-ttattgggtgtacgatagaattttccttt 52776862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 535 - 586
Target Start/End: Original strand, 14998506 - 14998556
Alignment:
Q  535 gatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||||||| ||||| ||||||| |||||||||||||| ||||||||    
T  14998506 gatttggtgtaccggtacactcaaattt-ttgggtgtaccataaaatttgcc 14998556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 586
Target Start/End: Complemental strand, 19547551 - 19547489
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||  ||||| ||||||||||||||| ||||||| |||| ||||||||| ||||||||    
T  19547551 tattaatttgttgattgggtgtaccgatacactcaaattt-ttggatgtaccatagaatttgcc 19547489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 586
Target Start/End: Original strand, 25592350 - 25592412
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||  |||||||||||| | |||||| ||||||| |||| ||||||||||||||||||    
T  25592350 tattaatttattgatttggtgtatcaatacactcaaattt-ttggatgtaccatataatttgcc 25592412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 541 - 595
Target Start/End: Original strand, 7352529 - 7352583
Alignment:
Q  541 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcctttaataat 595  Q
    |||||||||||||| ||||| || ||| ||||||||| |||||||||| ||||||    
T  7352529 gtgtaccgatacactcaaatatagtggatgtaccatagaatttgccttaaataat 7352583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 445 - 499
Target Start/End: Complemental strand, 20199487 - 20199433
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattattttt 499  Q
    |||||| |||| ||||||||||  || |||||||| |||||||||||||||||||    
T  20199487 ttgataaataagatttaattattataattgtcaatgatagaaaataattattttt 20199433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 523 - 589
Target Start/End: Original strand, 29347604 - 29347669
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 589  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||||||||||||| ||||| |||||    
T  29347604 tattaatttaaagatttggtgtaccaatacactcaaa-ttgttgggtgtaccatagaatttaccttt 29347669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 445 - 499
Target Start/End: Complemental strand, 47175607 - 47175553
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattattttt 499  Q
    |||||| |||| ||||||||||  || |||||||| |||||||||||||||||||    
T  47175607 ttgataaataagatttaattattataattgtcaatgatagaaaataattattttt 47175553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 537 - 586
Target Start/End: Complemental strand, 23795837 - 23795788
Alignment:
Q  537 tttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||||||||||| ||||| |||| ||||||| ||| ||||||||    
T  23795837 tttggtgtaccgatacactcaaatatattaggtgtacgataaaatttgcc 23795788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 540 - 585
Target Start/End: Complemental strand, 24170001 - 24169956
Alignment:
Q  540 ggtgtaccgatacacccaaatttattgggtgtaccatataatttgc 585  Q
    ||||||||||||||| ||||| || ||||||||||||| |||||||    
T  24170001 ggtgtaccgatacactcaaatatactgggtgtaccataaaatttgc 24169956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 541 - 586
Target Start/End: Complemental strand, 26849969 - 26849924
Alignment:
Q  541 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||||||| ||||| || ||||||||||||| ||||||||    
T  26849969 gtgtaccgatacactcaaatataatgggtgtaccatagaatttgcc 26849924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 523 - 584
Target Start/End: Complemental strand, 40477820 - 40477759
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 584  Q
    ||||||||| | || | ||||||||| ||||| ||||| |||||||||||||||| ||||||    
T  40477820 tattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttg 40477759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 541 - 586
Target Start/End: Complemental strand, 46671382 - 46671337
Alignment:
Q  541 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||| ||||| ||||| ||||||||||||| |||||||||||    
T  46671382 gtgtaccggtacactcaaatatattgggtgtaccgtataatttgcc 46671337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 1e-49; HSPs: 55)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 449 - 586
Target Start/End: Original strand, 28897173 - 28897310
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||||| ||||||||||     
T  28897173 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttatgacttggtgtacca 28897272  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  28897273 atacacccaaatttattgggtgtaccatagaatttgcc 28897310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 449 - 588
Target Start/End: Original strand, 45393716 - 45393855
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||  | |||||||||||    
T  45393716 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacaacttggtgtaccg 45393815  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||| ||||||||||||| ||||||||| ||||||||||    
T  45393816 atacatccaaatttattggatgtaccatagaatttgcctt 45393855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 449 - 583
Target Start/End: Original strand, 37766572 - 37766706
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||| |||||    
T  37766572 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtataccg 37766671  T
Q  549 atacacccaaatttattgggtgtaccatataattt 583  Q
    ||||| ||||||||||| ||||||||||| |||||    
T  37766672 atacatccaaatttattaggtgtaccatagaattt 37766706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 451 - 587
Target Start/End: Complemental strand, 21835566 - 21835430
Alignment:
Q  451 tataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgat 550  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||        |||||||||||||||||||||| || |||||||||||||    
T  21835566 tataaaatttaattatcttagttgccaatgatagaaaataattatttttcttcaaaaaaataactcatttattattaattttacgacttggtgtaccgat 21835467  T
Q  551 acacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||| |||||||||||||||||| |||| |||||||||    
T  21835466 acagccaaatttattgggtgtaacatagaatttgcct 21835430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 452 - 587
Target Start/End: Original strand, 37404875 - 37405010
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        ||||||||||||||||||||||||| ||||||||||||||    
T  37404875 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaagaactcatttattattaattttatgacttggtgtaccgata 37404974  T
Q  552 cacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||||||||||| | | || |||| |||||||||    
T  37404975 cacccaaatttattagatatatcatagaatttgcct 37405010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 452 - 586
Target Start/End: Original strand, 1426601 - 1426735
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| || ||||||||||||||    
T  1426601 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaactcatttattattaattttacgacttggtgtaccgata 1426700  T
Q  552 cacccaaatttattgggtgtaccatataatttgcc 586  Q
     || |||||||||||||| ||||||| ||||||||    
T  1426701 tactcaaatttattgggtctaccatacaatttgcc 1426735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 445 - 583
Target Start/End: Complemental strand, 36835483 - 36835345
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 544  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||        |||| |||||||||||||| || || |||||||    
T  36835483 ttgataaataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaacttatttattattaattgtacgacttggtgt 36835384  T
Q  545 accgatacacccaaatttattgggtgtaccatataattt 583  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  36835383 accgatacacccaaatttatttggtgtaccatagaattt 36835345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 452 - 584
Target Start/End: Complemental strand, 464383 - 464250
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaa-ctcatttattattaattttatgatttggtgtaccgat 550  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||        || |||||||||||||||||||| || || ||||||||||    
T  464383 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaaaaaactcatttattattaattttacgagttagtgtaccgat 464284  T
Q  551 acacccaaatttattgggtgtaccatataatttg 584  Q
    ||||||||||||||||||||||||||| ||||||    
T  464283 acacccaaatttattgggtgtaccatagaatttg 464250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 452 - 584
Target Start/End: Original strand, 12266349 - 12266481
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||| ||||||||||    
T  12266349 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttgatgtaccgata 12266448  T
Q  552 cacccaaatttattgggtgtaccatataatttg 584  Q
    |||||||||| | ||||||||||||| ||||||    
T  12266449 cacccaaattcaatgggtgtaccatagaatttg 12266481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 449 - 588
Target Start/End: Complemental strand, 45401285 - 45401146
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       |||||||||||||||||||||||  | ||| |||||||    
T  45401285 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacaacttgatgtaccg 45401186  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||| ||||||||||| | ||||||||| ||||| ||||    
T  45401185 atacatccaaatttattagatgtaccatagaatttacctt 45401146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 452 - 586
Target Start/End: Original strand, 196338 - 196471
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||        ||||||||||||||||||||||| || ||||||||||||||    
T  196338 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttctt-aaaaaaacaactcatttattattaattttacgacttggtgtaccgata 196436  T
Q  552 cacccaaatttattgggtgtaccatataatttgcc 586  Q
     ||| ||||||||||  ||||||||| ||||||||    
T  196437 aacctaaatttattgaatgtaccatagaatttgcc 196471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 452 - 586
Target Start/End: Original strand, 311175 - 311308
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||        ||||||||||||||||||||||| || ||||||||||||||    
T  311175 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttctt-aaaaaaacaactcatttattattaattttacgacttggtgtaccgata 311273  T
Q  552 cacccaaatttattgggtgtaccatataatttgcc 586  Q
     ||| ||||||||||  ||||||||| ||||||||    
T  311274 aacctaaatttattgaatgtaccatagaatttgcc 311308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 452 - 586
Target Start/End: Original strand, 29039885 - 29040019
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||  ||||||||||| ||||||||||| |||||||||||       ||||| ||||||||||||||| |||| ||||||||||||||    
T  29039885 ataaaatttaattattatagttgtcaatgatagaaaataaatatttttcttcaaaaaaacaactaatttattattaatttaatgaattggtgtaccgata 29039984  T
Q  552 cacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||||||| | ||||||||| ||||||||    
T  29039985 cacccaaatttatttgatgtaccatagaatttgcc 29040019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 449 - 596
Target Start/End: Complemental strand, 38971601 - 38971453
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||       ||||||||||||||||||  ||| || | |||||||||    
T  38971601 tatataaaatttaattattttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaaacttacgactaggtgtaccg 38971502  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcct-ttaataata 596  Q
    ||||| ||||||||||||| |||| | || ||||||||| |||||||||    
T  38971501 atacaaccaaatttattggatgtatcgtagaatttgcctcttaataata 38971453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 449 - 596
Target Start/End: Complemental strand, 39002699 - 39002551
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||       ||||||||||||||||||  ||| || | |||||||||    
T  39002699 tatataaaatttaattattttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaaacttacgactaggtgtaccg 39002600  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcct-ttaataata 596  Q
    ||||| ||||||||||||| |||| | || ||||||||| |||||||||    
T  39002599 atacaaccaaatttattggatgtatcgtagaatttgcctcttaataata 39002551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 449 - 558
Target Start/End: Complemental strand, 7223620 - 7223511
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  7223620 tatataaaatttaattattttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 7223521  T
Q  549 atacacccaa 558  Q
    ||||| ||||    
T  7223520 atacatccaa 7223511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 445 - 586
Target Start/End: Complemental strand, 38803575 - 38803434
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgt 544  Q
    |||||| |||||||||||||||  ||||||||||| |||||||||||||||||||||||        |||||||||||||||||||||| || ||||||     
T  38803575 ttgataaataaaatttaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaataactcatttattattaattttacgacttggtgc 38803476  T
Q  545 accgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||| ||||||||||| |||||||  || ||||||||    
T  38803475 accgatacatccaaatttattaggtgtacagtagaatttgcc 38803434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 452 - 590
Target Start/End: Original strand, 27101084 - 27101223
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnn-caactcatttattattaattttatgatttggtgtaccgat 550  Q
    ||||||||||||||   ||||||||||| |||||||||||||||||||||||        ||||||||||||||||||||| | || |||||||||||||    
T  27101084 ataaaatttaattactatagttgtcaatgatagaaaataattatttttcttcaaaaaaaacaactcatttattattaatttaacgacttggtgtaccgat 27101183  T
Q  551 acacccaaatttattgggtgtaccatataatttgccttta 590  Q
    ||||| ||||||||||| ||||||||| || |||||||||    
T  27101184 acacctaaatttattggatgtaccatagaaattgccttta 27101223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 449 - 564
Target Start/End: Original strand, 43182995 - 43183109
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||        ||||||||||||||||||||||| || |||||||||||    
T  43182995 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttctt-aaaaaaacaactcatttattattaattttacgacttggtgtaccg 43183093  T
Q  549 atacacccaaatttat 564  Q
    |||||  |||||||||    
T  43183094 atacattcaaatttat 43183109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 449 - 547
Target Start/End: Complemental strand, 38627124 - 38627026
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtacc 547  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||    
T  38627124 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtacc 38627026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 452 - 586
Target Start/End: Complemental strand, 3052933 - 3052799
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    ||||| |||||||||  ||||||||||| |||||||||||||||||||||||        |||| ||||||||||||||| | || ||||||||||||||    
T  3052933 ataaagtttaattattatagttgtcaatgatagaaaataattatttttcttcaaaaaaataactaatttattattaatttaacgaattggtgtaccgata 3052834  T
Q  552 cacccaaatttattgggtgtaccatataatttgcc 586  Q
    || ||||||||||||| | ||||||| ||||||||    
T  3052833 catccaaatttattggatataccatagaatttgcc 3052799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 517 - 586
Target Start/End: Original strand, 29565687 - 29565756
Alignment:
Q  517 atttattattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29565687 atttattattaattttacgacttggtgtaccgatacacccaaatttattgggtgtaccatagaatttgcc 29565756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 452 - 584
Target Start/End: Original strand, 41571982 - 41572113
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||  || |||||||| |||||||||||||||| ||||||       ||||| ||||||||||||||| |  | || |||||||||||    
T  41571982 ataaaatttaattattataattgtcaatgatagaaaataattattcttcttcaaaaaa-caactaatttattattaatttaacaaattagtgtaccgata 41572080  T
Q  552 cacccaaatttattgggtgtaccatataatttg 584  Q
     | ||||||||||||||||||||||||||||||    
T  41572081 tatccaaatttattgggtgtaccatataatttg 41572113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 520 - 591
Target Start/End: Original strand, 14914154 - 14914225
Alignment:
Q  520 tattattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctttaa 591  Q
    |||||||||||||| || |||||||||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  14914154 tattattaattttacgacttggtgtaccgatacacccaaatttattggatgtaccatagaatttgccattaa 14914225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 452 - 563
Target Start/End: Original strand, 18844432 - 18844543
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    ||||||||||||||   ||||||||||| ||| |||||||||||||||||||       ||||||||||||||||||||| | || ||||||||||||||    
T  18844432 ataaaatttaattactatagttgtcaatgataaaaaataattatttttcttcaaaaaatcaactcatttattattaatttaacgacttggtgtaccgata 18844531  T
Q  552 cacccaaattta 563  Q
    |||  |||||||    
T  18844532 cacataaattta 18844543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 449 - 490
Target Start/End: Original strand, 14914114 - 14914155
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaata 490  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  14914114 tatataaaatttaattatcttagttgtcaatgatagaaaata 14914155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 541 - 589
Target Start/End: Original strand, 26988749 - 26988797
Alignment:
Q  541 gtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 589  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| ||||    
T  26988749 gtgtaccgatacactcaaatatattgggtgtaccatataatttgtcttt 26988797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 521 - 587
Target Start/End: Original strand, 19718693 - 19718758
Alignment:
Q  521 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||||| ||||||||||||||  |||||| ||||||| |||| ||||||||| |||||||||    
T  19718693 attattaatttaatgatttggtgtactaatacactcaaattt-ttggatgtaccatagaatttgcct 19718758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 523 - 584
Target Start/End: Complemental strand, 1043121 - 1043060
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 584  Q
    ||||||||| | || | ||||||||||||||| ||||| |||||||||||||||| ||||||    
T  1043121 tattaatttaaagagtgggtgtaccgatacactcaaatatattgggtgtaccatagaatttg 1043060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 535 - 587
Target Start/End: Complemental strand, 12801157 - 12801106
Alignment:
Q  535 gatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||||||||||| ||||| ||||||| |||||||||||||| |||||||||    
T  12801157 gatttggtgtaccggtacactcaaattt-ttgggtgtaccatagaatttgcct 12801106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 523 - 587
Target Start/End: Original strand, 15726234 - 15726297
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||| | ||||||||||||| |||||| |||| ||||||| ||||||||| |||||||||    
T  15726234 tattaatttaaggatttggtgtaccaatacactcaaa-ttattggatgtaccatagaatttgcct 15726297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 523 - 587
Target Start/End: Original strand, 29454553 - 29454617
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||| | || | ||||||||| ||||| ||||| |||||||||||||||| |||||||||    
T  29454553 tattaatttaaagagtgggtgtaccggtacactcaaatatattgggtgtaccatagaatttgcct 29454617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 523 - 587
Target Start/End: Complemental strand, 29773507 - 29773444
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||||||||||||| |||||||||    
T  29773507 tattaatttaaggatttggtgtaccaatacactcaaa-ttgttgggtgtaccatagaatttgcct 29773444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 586
Target Start/End: Complemental strand, 2273072 - 2273010
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||| ||||||||||||||| |||||| || || | |||||||||||||| ||||||||    
T  2273072 tattaatttaatgatttggtgtaccaatacactcatatct-ttgggtgtaccatagaatttgcc 2273010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 503
Target Start/End: Original strand, 5982459 - 5982510
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttc 503  Q
    |||| ||||||||||  || |||||||| |||||||||||||||||||||||    
T  5982459 ataagatttaattattataattgtcaatgatagaaaataattatttttcttc 5982510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 586
Target Start/End: Complemental strand, 28090254 - 28090192
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||| | ||||||||||||| ||| || |||||| ||||||||||||||| ||||||||    
T  28090254 tattaatttaaggatttggtgtaccaatatactcaaatt-attgggtgtaccatagaatttgcc 28090192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 499
Target Start/End: Original strand, 34058103 - 34058150
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 499  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  34058103 ataagatttaattattatagttgtcaatgatagaaaataattattttt 34058150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 541 - 596
Target Start/End: Original strand, 37676299 - 37676354
Alignment:
Q  541 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcctttaataata 596  Q
    |||||||| ||||| ||||| || ||||||||||||| ||||||||||| ||||||    
T  37676299 gtgtaccggtacactcaaatatagtgggtgtaccatagaatttgccttttataata 37676354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 521 - 588
Target Start/End: Complemental strand, 40154552 - 40154487
Alignment:
Q  521 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||||||| ||| |||||||||||||||||| |||| |  |||||||||||||| ||||||||||    
T  40154552 attattaatttaatg-tttggtgtaccgatacactcaaaatg-ttgggtgtaccataaaatttgcctt 40154487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 499
Target Start/End: Complemental strand, 43331877 - 43331830
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 499  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  43331877 ataagatttaattattatagttgtcaatgatagaaaataattattttt 43331830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 499
Target Start/End: Complemental strand, 44309699 - 44309652
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattattttt 499  Q
    |||| ||||||||||  ||||||||||| |||||||||||||||||||    
T  44309699 ataagatttaattattatagttgtcaatgatagaaaataattattttt 44309652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 523 - 589
Target Start/End: Complemental strand, 16323621 - 16323556
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgccttt 589  Q
    |||||||||  |||||||||||||| |||||| ||||| | ||||||||| |||| |||||||||||    
T  16323621 tattaatttattgatttggtgtaccaatacactcaaatct-ttgggtgtatcatagaatttgccttt 16323556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 521 - 587
Target Start/End: Original strand, 17096624 - 17096688
Alignment:
Q  521 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    ||||||||||| ||| |||||||||||||||||| |||| |  |||||||||||||| |||||||||    
T  17096624 attattaatttaatg-tttggtgtaccgatacactcaaaatg-ttgggtgtaccatagaatttgcct 17096688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 541 - 587
Target Start/End: Original strand, 26522328 - 26522374
Alignment:
Q  541 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||||| ||||| ||||| || |||||||||||||||||||||||    
T  26522328 gtgtaccggtacactcaaatatagtgggtgtaccatataatttgcct 26522374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 524 - 586
Target Start/End: Original strand, 34047762 - 34047823
Alignment:
Q  524 attaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||| || ||||||||||||| ||||| |||| || |||||||||||||| ||||||||    
T  34047762 attaatttaataatttggtgtaccggtacactcaaa-ttgttgggtgtaccatagaatttgcc 34047823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 445 - 499
Target Start/End: Complemental strand, 41674624 - 41674570
Alignment:
Q  445 ttgatatataaaatttaattatcttagttgtcaatcatagaaaataattattttt 499  Q
    |||||| |||| ||||||||||  || |||||||| |||||||||||||||||||    
T  41674624 ttgataaataagatttaattattataattgtcaatgatagaaaataattattttt 41674570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 524 - 586
Target Start/End: Complemental strand, 43049598 - 43049537
Alignment:
Q  524 attaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||| ||||||||||||||| |||||  ||||||| |||| ||||||||| ||||||||    
T  43049598 attaatttaatgatttggtgtaccaatacattcaaattt-ttggatgtaccatagaatttgcc 43049537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 586
Target Start/End: Complemental strand, 2261094 - 2261029
Alignment:
Q  521 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||||| | || | ||||||||| ||||| ||||| ||||| |||||||||| ||||||||    
T  2261094 attattaatttaaagagtgggtgtaccggtacactcaaatatattgagtgtaccatagaatttgcc 2261029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 586
Target Start/End: Original strand, 5215663 - 5215727
Alignment:
Q  521 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||||| ||| ||| |||||||||||||| ||||  ||||| |||||||||| ||||||||    
T  5215663 attattaatttaatgtttttgtgtaccgatacactcaaa-atattgagtgtaccataaaatttgcc 5215727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 523 - 588
Target Start/End: Original strand, 6631249 - 6631314
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||||| | || | ||| ||||| ||||| ||||| |||||||||||||||| ||||||||||    
T  6631249 tattaatttaaagaatgggtataccggtacactcaaatatattgggtgtaccatagaatttgcctt 6631314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 523 - 588
Target Start/End: Original strand, 6800116 - 6800180
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||||  ||||||||||||||| |||||| ||||| | ||| |||||||||| ||||||||||    
T  6800116 tattaattcaatgatttggtgtaccaatacactcaaatct-ttgagtgtaccataaaatttgcctt 6800180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 523 - 588
Target Start/End: Complemental strand, 17642136 - 17642072
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||||| ||||||||||||||| |||||| || || | |||| ||||||||| ||||||||||    
T  17642136 tattaatttaatgatttggtgtaccaatacactcatatct-ttggatgtaccatagaatttgcctt 17642072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 523 - 588
Target Start/End: Complemental strand, 23286627 - 23286563
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||||| | ||||||||||||| |||||| |||| || || ||||||||||| ||||||||||    
T  23286627 tattaatttaaggatttggtgtaccaatacacgcaaa-ttgttaggtgtaccatagaatttgcctt 23286563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 586
Target Start/End: Original strand, 32071586 - 32071650
Alignment:
Q  521 attattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||||| | ||||| |||||||||| ||| ||||||| || ||||||||||| ||||||||    
T  32071586 attattaatttaacgatttcgtgtaccgattcactcaaattt-ttcggtgtaccataaaatttgcc 32071650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 523 - 588
Target Start/End: Complemental strand, 37511150 - 37511086
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||||||| | ||||||||||||| |||||| |||| || |||||||||||||  ||||||||||    
T  37511150 tattaatttaaagatttggtgtaccaatacactcaaa-ttgttgggtgtaccatcgaatttgcctt 37511086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 96; Significance: 1e-46; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 449 - 589
Target Start/End: Original strand, 166687 - 166827
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||||||||||    
T  166687 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccg 166786  T
Q  549 atacacccaaatttattgggtgtaccatataatttgccttt 589  Q
    ||||||||||||||||||  ||||||||| |||||||||||    
T  166787 atacacccaaatttattgaatgtaccatagaatttgccttt 166827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 91; Significance: 1e-43; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 452 - 587
Target Start/End: Complemental strand, 13737 - 13602
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  13737 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 13638  T
Q  552 cacccaaatttattgggtgtaccatataatttgcct 587  Q
    |||||||||| ||||||||||||||| |||||||||    
T  13637 cacccaaattcattgggtgtaccatagaatttgcct 13602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1999 (Bit Score: 89; Significance: 2e-42; HSPs: 1)
Name: scaffold1999
Description:

Target: scaffold1999; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 449 - 586
Target Start/End: Complemental strand, 1140 - 1003
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||| || |||| ||||||    
T  1140 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggagtaccg 1041  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||||||||||| | ||||||||| ||||||||    
T  1040 atacacccaaatttattagatgtaccataaaatttgcc 1003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 88; Significance: 7e-42; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 454 - 586
Target Start/End: Complemental strand, 15512 - 15380
Alignment:
Q  454 aaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgataca 553  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||        |||||||||||||||||||||| || ||||||||||||||||    
T  15512 aaaatttaattatcttagttgtcaatgatagaaaataattattttttttcaaaaaaataactcatttattattaattttacgacttggtgtaccgataca 15413  T
Q  554 cccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||||||||||||||||| ||||||||    
T  15412 cccaaatttattgggtgtaccatagaatttgcc 15380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0493 (Bit Score: 82; Significance: 3e-38; HSPs: 1)
Name: scaffold0493
Description:

Target: scaffold0493; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 449 - 588
Target Start/End: Complemental strand, 1519 - 1379
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaa--ttttatgatttggtgtac 546  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||        |||||||||||||||| |  |||||||| |||||||||    
T  1519 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttctt-aaaaaaacaactcatttattatttaatttttatgacttggtgtac 1421  T
Q  547 cgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    | ||||||||||||||||||||||||||||| ||||||||||    
T  1420 caatacacccaaatttattgggtgtaccatagaatttgcctt 1379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 81; Significance: 1e-37; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 449 - 586
Target Start/End: Complemental strand, 291760 - 291623
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||         | | ||||||||||||||||| ||||||||||||||    
T  291760 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaattatttatttattattaattttacgatttggtgtaccg 291661  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||||||||||||||  ||||||||| ||||||||    
T  291660 atacacccaaatttattgaatgtaccatagaatttgcc 291623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 77; Significance: 2e-35; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 449 - 586
Target Start/End: Original strand, 17764 - 17900
Alignment:
Q  449 tatataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccg 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| | ||       ||||||||||||||||||||||| || ||||||||||     
T  17764 tatataaaatttaattatcttagttgtcaatgatagaaaataattatttt-catcaaaaaaacaactcatttattattaattttacgacttggtgtacca 17862  T
Q  549 atacacccaaatttattgggtgtaccatataatttgcc 586  Q
    ||||||| ||||||||||| ||||||||| ||||||||    
T  17863 atacacctaaatttattggatgtaccatagaatttgcc 17900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 452 - 559
Target Start/End: Original strand, 8699 - 8806
Alignment:
Q  452 ataaaatttaattatcttagttgtcaatcatagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgata 551  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||       ||||| ||||||||||||||||| || ||||||||||||||    
T  8699 ataaaatttaattatcttagttgtcaatgatagaaaataattatttttcttcaaaaaaacaactgatttattattaattttacgacttggtgtaccgata 8798  T
Q  552 cacccaaa 559  Q
    ||| ||||    
T  8799 cactcaaa 8806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 511 - 584
Target Start/End: Original strand, 26974 - 27047
Alignment:
Q  511 caactcatttattattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttg 584  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| ||||||    
T  26974 caactcatttattattaattttacgacttggtgtaccgatacacccaaatttattgggtgtaccatagaatttg 27047  T

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Target: scaffold0301 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 481 - 587
Target Start/End: Complemental strand, 21563 - 21459
Alignment:
Q  481 atagaaaataattatttttcttcnnnnnnncaactcatttattattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataa 580  Q
    |||||||||||||||||||||||       ||||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||| |||| ||    
T  21563 atagaaaataattatttttcttcaaaaaaacaactcatttattattaattttacgacttggtgtaccgatacaccc-aatttattgggtgta-catagaa 21466  T
Q  581 tttgcct 587  Q
    |||||||    
T  21465 tttgcct 21459  T

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Target: scaffold0184 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 586
Target Start/End: Original strand, 16944 - 16989
Alignment:
Q  541 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||    
T  16944 gtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 16989  T

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Target: scaffold0078 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 586
Target Start/End: Complemental strand, 55900 - 55855
Alignment:
Q  541 gtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||    
T  55900 gtgtaccgatacactcaaatatattgggtgtaccatagaatttgcc 55855  T

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Target: scaffold0625 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 586
Target Start/End: Original strand, 6607 - 6669
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcc 586  Q
    |||||||||  |||||||||||||| |||||| ||||||| || ||||||||||| ||||||||    
T  6607 tattaatttattgatttggtgtaccaatacactcaaattt-tttggtgtaccatagaatttgcc 6669  T

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Target: scaffold1844 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold1844
Description:

Target: scaffold1844; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 527 - 588
Target Start/End: Complemental strand, 1174 - 1114
Alignment:
Q  527 aattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctt 588  Q
    ||||| |||||||||||||||| ||||| ||||||| ||  |||||||||| ||||||||||    
T  1174 aatttgatgatttggtgtaccggtacactcaaattt-ttaagtgtaccatagaatttgcctt 1114  T

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Target: scaffold0432 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 523 - 592
Target Start/End: Original strand, 3373 - 3442
Alignment:
Q  523 tattaattttatgatttggtgtaccgatacacccaaatttattgggtgtaccatataatttgcctttaat 592  Q
    ||||||||| | || | ||||||| | ||||| ||||| |||||||||||||||| |||||||| |||||    
T  3373 tattaatttaaagagtaggtgtactggtacactcaaatatattgggtgtaccatagaatttgcccttaat 3442  T

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