View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3485_low_53 (Length: 236)

Name: NF3485_low_53
Description: NF3485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3485_low_53
NF3485_low_53
[»] chr5 (36 HSPs)
chr5 (19-234)||(23462096-23462311)
chr5 (23-234)||(23439228-23439439)
chr5 (23-234)||(23450595-23450806)
chr5 (51-234)||(23457867-23458050)
chr5 (17-234)||(1859638-1859856)
chr5 (19-234)||(20766223-20766441)
chr5 (19-234)||(20804802-20805019)
chr5 (15-228)||(33408507-33408720)
chr5 (15-223)||(16673430-16673638)
chr5 (17-163)||(17409741-17409887)
chr5 (136-234)||(21367323-21367421)
chr5 (40-95)||(13024570-13024623)
chr5 (20-95)||(13094734-13094807)
chr5 (137-187)||(21502915-21502965)
chr5 (20-95)||(21998358-21998431)
chr5 (137-187)||(22142117-22142167)
chr5 (137-187)||(26012758-26012808)
chr5 (134-175)||(5890446-5890487)
chr5 (138-187)||(20032420-20032469)
chr5 (39-92)||(24492807-24492858)
chr5 (17-174)||(19661564-19661729)
chr5 (108-173)||(25418824-25418890)
chr5 (20-53)||(1693298-1693331)
chr5 (20-53)||(18039530-18039563)
chr5 (20-53)||(22264164-22264197)
chr5 (20-53)||(24473106-24473139)
chr5 (20-53)||(27664649-27664682)
chr5 (20-53)||(27671288-27671321)
chr5 (20-53)||(27681548-27681581)
chr5 (20-53)||(27688190-27688223)
chr5 (20-53)||(41099082-41099115)
chr5 (108-159)||(21293711-21293763)
chr5 (137-187)||(21330252-21330301)
chr5 (137-173)||(21742772-21742808)
chr5 (134-173)||(25430745-25430785)
chr5 (137-173)||(29916334-29916370)
[»] scaffold0434 (1 HSPs)
scaffold0434 (17-234)||(38-257)
[»] chr3 (39 HSPs)
chr3 (20-234)||(26197079-26197294)
chr3 (20-236)||(12038384-12038598)
chr3 (19-234)||(11302696-11302912)
chr3 (39-234)||(12502760-12502958)
chr3 (17-221)||(327798-328002)
chr3 (15-228)||(38813662-38813875)
chr3 (39-223)||(51694788-51694972)
chr3 (15-223)||(3832951-3833159)
chr3 (20-156)||(2898505-2898643)
chr3 (126-234)||(321944-322051)
chr3 (136-234)||(12495620-12495717)
chr3 (73-187)||(13211050-13211162)
chr3 (136-234)||(14447500-14447597)
chr3 (39-187)||(12398465-12398610)
chr3 (161-234)||(18382926-18382997)
chr3 (139-234)||(18384572-18384666)
chr3 (39-159)||(13441594-13441712)
chr3 (39-125)||(23078149-23078234)
chr3 (39-95)||(26682593-26682647)
chr3 (137-187)||(14233795-14233845)
chr3 (134-175)||(22791132-22791173)
chr3 (17-95)||(30025305-30025382)
chr3 (17-95)||(30027788-30027865)
chr3 (97-159)||(20700062-20700123)
chr3 (97-187)||(23083840-23083928)
chr3 (108-174)||(25477117-25477184)
chr3 (137-187)||(15467218-15467269)
chr3 (39-95)||(18437773-18437827)
chr3 (137-187)||(1466657-1466707)
chr3 (177-234)||(15051257-15051314)
chr3 (20-53)||(2028459-2028492)
chr3 (20-53)||(5107742-5107775)
chr3 (134-187)||(11425434-11425487)
chr3 (20-53)||(12842532-12842565)
chr3 (17-95)||(30024037-30024114)
chr3 (17-95)||(30029057-30029134)
chr3 (20-53)||(37614606-37614639)
chr3 (15-55)||(14129607-14129647)
chr3 (135-187)||(17487217-17487269)
[»] chr2 (28 HSPs)
chr2 (20-234)||(25964390-25964603)
chr2 (17-234)||(24703835-24704054)
chr2 (17-234)||(24717175-24717394)
chr2 (20-236)||(37523942-37524155)
chr2 (17-223)||(19692266-19692471)
chr2 (18-234)||(21319324-21319539)
chr2 (18-234)||(21328255-21328470)
chr2 (136-234)||(22812595-22812692)
chr2 (39-159)||(21901193-21901311)
chr2 (108-174)||(24085772-24085838)
chr2 (39-95)||(22336372-22336426)
chr2 (15-174)||(23072680-23072847)
chr2 (137-187)||(23713635-23713685)
chr2 (18-94)||(20321885-20321960)
chr2 (39-97)||(23285677-23285733)
chr2 (97-174)||(23059818-23059896)
chr2 (15-95)||(27345214-27345295)
chr2 (20-53)||(22321846-22321879)
chr2 (20-53)||(22327999-22328032)
chr2 (138-175)||(22499995-22500032)
chr2 (20-53)||(24261191-24261224)
chr2 (20-53)||(24266274-24266307)
chr2 (20-53)||(25191795-25191828)
chr2 (20-53)||(28432789-28432822)
chr2 (20-53)||(33484810-33484843)
chr2 (15-95)||(23655206-23655285)
chr2 (137-187)||(24689046-24689095)
chr2 (15-55)||(40427703-40427743)
[»] chr8 (28 HSPs)
chr8 (19-234)||(22011318-22011535)
chr8 (20-234)||(15603634-15603845)
chr8 (23-236)||(16410919-16411132)
chr8 (20-234)||(17927362-17927573)
chr8 (39-234)||(15612086-15612278)
chr8 (17-234)||(16862260-16862477)
chr8 (17-173)||(22819468-22819625)
chr8 (15-209)||(26953436-26953630)
chr8 (39-159)||(18879966-18880083)
chr8 (39-187)||(17140176-17140320)
chr8 (39-157)||(21248642-21248756)
chr8 (20-174)||(31970544-31970696)
chr8 (72-174)||(5866980-5867080)
chr8 (39-157)||(20535472-20535588)
chr8 (39-92)||(21396783-21396838)
chr8 (39-92)||(21791276-21791331)
chr8 (108-174)||(40398181-40398247)
chr8 (39-95)||(21254468-21254523)
chr8 (137-183)||(21285372-21285418)
chr8 (134-175)||(5610884-5610925)
chr8 (108-173)||(21919676-21919740)
chr8 (137-185)||(20493582-20493629)
chr8 (39-95)||(23647868-23647922)
chr8 (20-95)||(7372006-7372078)
chr8 (20-53)||(12277835-12277868)
chr8 (20-53)||(29532222-29532255)
chr8 (15-55)||(39095761-39095801)
chr8 (17-95)||(45131809-45131885)
[»] chr6 (27 HSPs)
chr6 (17-234)||(22408944-22409164)
chr6 (17-236)||(18179740-18179960)
chr6 (17-159)||(31165579-31165725)
chr6 (39-234)||(21765964-21766160)
chr6 (15-228)||(22603769-22603982)
chr6 (39-234)||(21831085-21831281)
chr6 (39-159)||(1560556-1560673)
chr6 (126-234)||(16524041-16524148)
chr6 (109-234)||(18692572-18692696)
chr6 (108-174)||(20593128-20593197)
chr6 (72-159)||(19398896-19398982)
chr6 (17-89)||(17803499-17803571)
chr6 (131-223)||(17803580-17803672)
chr6 (97-187)||(28497194-28497283)
chr6 (97-187)||(29809605-29809694)
chr6 (108-159)||(35244911-35244962)
chr6 (137-175)||(25957732-25957770)
chr6 (137-175)||(25965779-25965817)
chr6 (17-94)||(16921438-16921514)
chr6 (137-187)||(23018726-23018776)
chr6 (20-53)||(2870912-2870945)
chr6 (20-53)||(30596439-30596472)
chr6 (15-55)||(20908799-20908839)
chr6 (15-55)||(20923247-20923287)
chr6 (139-175)||(29059894-29059930)
chr6 (137-173)||(31156089-31156125)
chr6 (17-95)||(35244814-35244890)
[»] chr7 (23 HSPs)
chr7 (17-234)||(2759378-2759596)
chr7 (19-234)||(3271111-3271323)
chr7 (17-223)||(13636083-13636289)
chr7 (20-128)||(12317428-12317536)
chr7 (20-174)||(16403156-16403308)
chr7 (39-159)||(15755702-15755819)
chr7 (39-159)||(9508454-9508574)
chr7 (20-159)||(28506076-28506212)
chr7 (139-234)||(14125853-14125947)
chr7 (139-234)||(14429249-14429343)
chr7 (15-159)||(11996767-11996908)
chr7 (137-187)||(16055653-16055703)
chr7 (137-187)||(22072325-22072375)
chr7 (137-187)||(47831117-47831167)
chr7 (137-174)||(16220487-16220524)
chr7 (88-159)||(12698137-12698207)
chr7 (17-94)||(27848595-27848671)
chr7 (20-53)||(11365407-11365440)
chr7 (20-53)||(11857185-11857218)
chr7 (20-53)||(13683672-13683705)
chr7 (20-53)||(13690303-13690336)
chr7 (20-53)||(17053294-17053327)
chr7 (20-53)||(18165533-18165566)
[»] scaffold1108 (1 HSPs)
scaffold1108 (19-234)||(2605-2821)
[»] scaffold0008 (3 HSPs)
scaffold0008 (21-234)||(34512-34725)
scaffold0008 (136-234)||(79070-79167)
scaffold0008 (108-163)||(84699-84754)
[»] scaffold0080 (1 HSPs)
scaffold0080 (17-234)||(17129-17348)
[»] chr1 (19 HSPs)
chr1 (20-234)||(3473596-3473809)
chr1 (17-234)||(17679240-17679457)
chr1 (17-128)||(3707769-3707880)
chr1 (17-134)||(30643689-30643806)
chr1 (20-174)||(27240516-27240668)
chr1 (97-159)||(22531573-22531636)
chr1 (39-173)||(20134428-20134570)
chr1 (39-159)||(22359457-22359575)
chr1 (39-121)||(22368033-22368114)
chr1 (20-55)||(16081216-16081251)
chr1 (39-95)||(21302357-21302411)
chr1 (138-184)||(16757970-16758015)
chr1 (137-187)||(35982949-35982999)
chr1 (20-53)||(19302250-19302283)
chr1 (20-53)||(20934549-20934582)
chr1 (20-53)||(41479417-41479450)
chr1 (134-175)||(43689858-43689899)
chr1 (108-159)||(34509098-34509149)
chr1 (137-187)||(52928710-52928759)
[»] scaffold0289 (1 HSPs)
scaffold0289 (19-234)||(1079-1291)
[»] chr4 (24 HSPs)
chr4 (17-163)||(5339700-5339846)
chr4 (39-187)||(44052096-44052240)
chr4 (136-236)||(16488749-16488848)
chr4 (136-234)||(16357609-16357707)
chr4 (136-234)||(16349321-16349419)
chr4 (15-159)||(12901994-12902134)
chr4 (20-95)||(16240779-16240852)
chr4 (137-187)||(52243952-52244002)
chr4 (138-187)||(12773425-12773472)
chr4 (20-95)||(16271012-16271085)
chr4 (17-55)||(16352619-16352657)
chr4 (17-159)||(14054035-14054172)
chr4 (39-95)||(7798015-7798069)
chr4 (39-95)||(15614338-15614392)
chr4 (17-94)||(17045725-17045801)
chr4 (20-53)||(3108362-3108395)
chr4 (134-175)||(13843572-13843613)
chr4 (20-53)||(16207010-16207043)
chr4 (20-53)||(17963207-17963240)
chr4 (20-53)||(20114700-20114733)
chr4 (20-53)||(23953360-23953393)
chr4 (20-53)||(23960022-23960055)
chr4 (137-173)||(15095856-15095892)
chr4 (137-187)||(16375551-16375600)
[»] scaffold0280 (1 HSPs)
scaffold0280 (17-159)||(23094-23235)
[»] scaffold0185 (1 HSPs)
scaffold0185 (17-163)||(32791-32936)
[»] scaffold0012 (3 HSPs)
scaffold0012 (19-234)||(32212-32430)
scaffold0012 (138-187)||(221628-221676)
scaffold0012 (20-95)||(225812-225887)
[»] scaffold0367 (1 HSPs)
scaffold0367 (19-234)||(122-338)
[»] scaffold0036 (1 HSPs)
scaffold0036 (17-232)||(67037-67252)
[»] scaffold0451 (1 HSPs)
scaffold0451 (17-223)||(12827-13032)
[»] scaffold0001 (1 HSPs)
scaffold0001 (15-175)||(198036-198198)
[»] scaffold0122 (2 HSPs)
scaffold0122 (17-223)||(1088-1294)
scaffold0122 (108-174)||(39436-39504)
[»] scaffold0020 (1 HSPs)
scaffold0020 (15-228)||(14415-14628)
[»] scaffold0165 (1 HSPs)
scaffold0165 (15-228)||(25947-26159)
[»] scaffold0346 (1 HSPs)
scaffold0346 (39-234)||(14386-14583)
[»] scaffold0216 (1 HSPs)
scaffold0216 (17-234)||(17776-17996)
[»] scaffold0305 (1 HSPs)
scaffold0305 (39-187)||(19942-20086)
[»] scaffold0059 (1 HSPs)
scaffold0059 (136-234)||(58030-58127)
[»] scaffold0647 (1 HSPs)
scaffold0647 (39-187)||(6790-6934)
[»] scaffold0104 (2 HSPs)
scaffold0104 (136-233)||(8872-8968)
scaffold0104 (20-53)||(29535-29568)
[»] scaffold0175 (1 HSPs)
scaffold0175 (42-174)||(33381-33513)
[»] scaffold0124 (1 HSPs)
scaffold0124 (136-234)||(41981-42078)
[»] scaffold0615 (1 HSPs)
scaffold0615 (136-236)||(2726-2825)
[»] scaffold0266 (1 HSPs)
scaffold0266 (20-187)||(22131-22293)
[»] scaffold0412 (1 HSPs)
scaffold0412 (136-234)||(14374-14471)
[»] scaffold0079 (2 HSPs)
scaffold0079 (136-234)||(23031-23129)
scaffold0079 (136-234)||(37862-37960)
[»] scaffold1459 (1 HSPs)
scaffold1459 (17-117)||(1-102)
[»] scaffold0423 (1 HSPs)
scaffold0423 (39-155)||(505-618)
[»] scaffold0393 (1 HSPs)
scaffold0393 (139-234)||(856-951)
[»] scaffold0235 (1 HSPs)
scaffold0235 (20-159)||(12189-12326)
[»] scaffold0933 (1 HSPs)
scaffold0933 (19-88)||(4068-4138)
[»] scaffold0848 (1 HSPs)
scaffold0848 (19-174)||(3876-4027)
[»] scaffold0825 (1 HSPs)
scaffold0825 (39-159)||(382-499)
[»] scaffold0161 (1 HSPs)
scaffold0161 (72-159)||(3138-3225)
[»] scaffold0042 (2 HSPs)
scaffold0042 (39-159)||(24837-24953)
scaffold0042 (20-53)||(98103-98136)
[»] scaffold0427 (1 HSPs)
scaffold0427 (72-174)||(12792-12896)
[»] scaffold0114 (2 HSPs)
scaffold0114 (15-174)||(26355-26511)
scaffold0114 (15-174)||(16195-16362)
[»] scaffold0004 (1 HSPs)
scaffold0004 (123-223)||(190-289)
[»] scaffold0483 (1 HSPs)
scaffold0483 (17-64)||(413-460)
[»] scaffold0109 (1 HSPs)
scaffold0109 (17-64)||(45200-45247)
[»] scaffold0193 (1 HSPs)
scaffold0193 (39-121)||(12480-12559)
[»] scaffold0003 (1 HSPs)
scaffold0003 (39-187)||(411827-411972)
[»] scaffold0639 (1 HSPs)
scaffold0639 (39-187)||(7728-7882)
[»] scaffold0403 (1 HSPs)
scaffold0403 (43-159)||(4111-4225)
[»] scaffold1098 (1 HSPs)
scaffold1098 (39-173)||(2370-2513)
[»] scaffold0094 (1 HSPs)
scaffold0094 (19-174)||(544-694)
[»] scaffold0026 (1 HSPs)
scaffold0026 (39-173)||(25186-25329)
[»] scaffold0021 (1 HSPs)
scaffold0021 (20-95)||(121047-121120)
[»] scaffold0011 (1 HSPs)
scaffold0011 (20-95)||(168796-168870)
[»] scaffold0673 (1 HSPs)
scaffold0673 (139-234)||(7920-8014)
[»] scaffold0174 (2 HSPs)
scaffold0174 (20-95)||(12323-12398)
scaffold0174 (20-53)||(176-209)
[»] scaffold0146 (1 HSPs)
scaffold0146 (108-159)||(29574-29625)
[»] scaffold1655 (1 HSPs)
scaffold1655 (39-95)||(637-692)
[»] scaffold1172 (1 HSPs)
scaffold1172 (20-159)||(2063-2209)
[»] scaffold0145 (1 HSPs)
scaffold0145 (20-95)||(31743-31816)
[»] scaffold0309 (1 HSPs)
scaffold0309 (108-174)||(13218-13286)
[»] scaffold0034 (2 HSPs)
scaffold0034 (137-173)||(31854-31890)
scaffold0034 (137-187)||(52894-52944)
[»] scaffold0022 (3 HSPs)
scaffold0022 (138-174)||(43005-43041)
scaffold0022 (138-174)||(76725-76761)
scaffold0022 (138-174)||(73220-73256)
[»] scaffold0017 (5 HSPs)
scaffold0017 (108-159)||(193728-193779)
scaffold0017 (16-95)||(193800-193877)
scaffold0017 (15-55)||(16037-16077)
scaffold0017 (15-55)||(20559-20599)
scaffold0017 (15-55)||(21690-21730)
[»] scaffold0100 (1 HSPs)
scaffold0100 (43-95)||(16908-16958)
[»] scaffold0064 (1 HSPs)
scaffold0064 (108-159)||(46330-46381)
[»] scaffold0051 (1 HSPs)
scaffold0051 (39-91)||(65783-65833)
[»] scaffold0507 (1 HSPs)
scaffold0507 (137-187)||(8815-8865)
[»] scaffold0239 (1 HSPs)
scaffold0239 (20-95)||(26254-26327)
[»] scaffold0221 (1 HSPs)
scaffold0221 (137-187)||(1275-1325)
[»] scaffold0120 (3 HSPs)
scaffold0120 (20-95)||(15383-15456)
scaffold0120 (20-53)||(7-40)
scaffold0120 (108-159)||(12636-12687)
[»] scaffold0031 (1 HSPs)
scaffold0031 (39-94)||(127996-128049)
[»] scaffold0009 (1 HSPs)
scaffold0009 (137-175)||(84597-84635)
[»] scaffold1212 (1 HSPs)
scaffold1212 (20-53)||(2350-2383)
[»] scaffold0810 (1 HSPs)
scaffold0810 (134-175)||(2043-2084)
[»] scaffold0490 (1 HSPs)
scaffold0490 (116-174)||(1292-1352)
[»] scaffold0379 (2 HSPs)
scaffold0379 (20-53)||(250-283)
scaffold0379 (20-53)||(11562-11595)
[»] scaffold0252 (1 HSPs)
scaffold0252 (20-53)||(24520-24553)
[»] scaffold0218 (1 HSPs)
scaffold0218 (20-53)||(25581-25614)
[»] scaffold0090 (1 HSPs)
scaffold0090 (39-97)||(29929-29985)
[»] scaffold0032 (1 HSPs)
scaffold0032 (20-53)||(101585-101618)
[»] scaffold0598 (1 HSPs)
scaffold0598 (17-92)||(1816-1890)
[»] scaffold0530 (1 HSPs)
scaffold0530 (137-187)||(1794-1843)
[»] scaffold0273 (1 HSPs)
scaffold0273 (137-187)||(10748-10797)
[»] scaffold0158 (1 HSPs)
scaffold0158 (19-55)||(2116-2152)
[»] scaffold0113 (1 HSPs)
scaffold0113 (108-156)||(31403-31451)
[»] scaffold0037 (1 HSPs)
scaffold0037 (136-175)||(22255-22295)
[»] scaffold0015 (1 HSPs)
scaffold0015 (15-55)||(195762-195802)


Alignment Details
Target: chr5 (Bit Score: 172; Significance: 1e-92; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 23462096 - 23462311
Alignment:
Q  19 aatcagagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaat 118  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23462096 aatcagagtaatcatcaaataacgggatatcacattcttaaaaatcttaaatcatagataaataataatttatcctttgtcaacaaaacagcagcggaat 23462195  T
Q  119 taaattcaaattatcaaaaagtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagc 218  Q
    ||||||||||| |||| |||||||| ||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||    
T  23462196 taaattcaaatcatcataaagtcttagcacgtaggcctcaataaacatctcataaaatttcagttaaacttcaataaatgaacacgtaaaagaatgaagc 23462295  T
Q  219 atgcataacataaacc 234  Q
    ||||||| ||||||||    
T  23462296 atgcatatcataaacc 23462311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 23 - 234
Target Start/End: Original strand, 23439228 - 23439439
Alignment:
Q  23 agagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaaa 122  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23439228 agagtaatcatcaaataacgggatatcgcattcttaaaaatcttaaatcatagataaataataatttatcctttgtcaacaaaacagcagcggaattaaa 23439327  T
Q  123 ttcaaattatcaaaaagtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgc 222  Q
    ||||||| |||| |||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||    
T  23439328 ttcaaatcatcataaagtcttggcacgtaggcctcaataaacatctcataaaatttcagttaaacttcaataaatgaacacgtaaaagaatgaagcatgc 23439427  T
Q  223 ataacataaacc 234  Q
    ||| ||||||||    
T  23439428 atatcataaacc 23439439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 23 - 234
Target Start/End: Original strand, 23450595 - 23450806
Alignment:
Q  23 agagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaaa 122  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  23450595 agagtaatcatcaaataacgggatatcgcattcttaaaaatcttaaatcatagataaataataatttatcctttgtcaacaaaacagcagcggaattaaa 23450694  T
Q  123 ttcaaattatcaaaaagtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgc 222  Q
    ||||||| |||| |||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||    
T  23450695 ttcaaatcatcataaagtcttggcacgtaggcctcaataaacatctcataaaatttcagttaaacttcaataaatgaacacgtaaaagaatgaagcatgc 23450794  T
Q  223 ataacataaacc 234  Q
    ||| ||||||||    
T  23450795 atatcataaacc 23450806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 51 - 234
Target Start/End: Original strand, 23457867 - 23458050
Alignment:
Q  51 cattcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaaattatcaaaaagtcttggcacgc 150  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||| |||||     
T  23457867 cattcttaaaaatcttaaatcatagataaataataatttatcctttgtcaacaaaacagcagcggaattaaattcaaatcatcataaagtcttagcacgt 23457966  T
Q  151 aggcctcattaaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcataacataaacc 234  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||| ||||||||    
T  23457967 aggcctcaataaacatctcataaaatttcagttaaacttcaataaatgaacacgtaaaagaatgaagcatgcatatcataaacc 23458050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 17 - 234
Target Start/End: Complemental strand, 1859856 - 1859638
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaat-catagataaataataatttatcctttatcaacaaaacagcagcgg 115  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||| ||||||||||| |||||||    
T  1859856 ataatcagagtaatcatcaaataacgggatatcacattcttaaaaatcttaaaaacatagataaataataatttattcttcatcaacaaaactgcagcgg 1859757  T
Q  116 aattaaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatg 214  Q
    |||||||||||||| |||| ||||||| ||||||||||||||||| ||||||||||||| | |||||| |||  || ||||||||||||||||||  |||    
T  1859756 aattaaattcaaatcatcataaagtctcggcacgcaggcctcattaaaacatctcataataattcagtcaaatatc-ataaatgaacacgtaaaagaatg 1859658  T
Q  215 aagcatgcataacataaacc 234  Q
    ||||||||||| ||||||||    
T  1859657 aagcatgcatatcataaacc 1859638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 20766223 - 20766441
Alignment:
Q  19 aatcagagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaat-catagataaataataatttatcctttatcaacaaaacagcagcggaa 117  Q
    ||||| ||||||||||||  || |||||||||||||||||||||||| |||  ||||||||||||||||||||||||| |||||| ||| |||||||||     
T  20766223 aatcatagtaatcatcaattaatgggatatcacattcttaaaaatctcaaaaacatagataaataataatttatccttcatcaaccaaatagcagcggag 20766322  T
Q  118 ttaaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcat-aaaagttcagttaaacttcaataaatgaacacgtaaaaagatga 215  Q
    |||||||||||| |||| ||||||||||||||||| ||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||  ||||    
T  20766323 ttaaattcaaatcatcataaagtcttggcacgcagacctcattaaaacatctcataaaaatttcagttaaacttcaataaatgaacacgtaaaagaatga 20766422  T
Q  216 agcatgcataacataaacc 234  Q
    |||||||||||||||||||    
T  20766423 agcatgcataacataaacc 20766441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 20804802 - 20805019
Alignment:
Q  19 aatcagagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaat-catagataaataataatttatcctttatcaacaaaacagcagcggaa 117  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||  ||||| ||| ||||||||||    
T  20804802 aatcagagtaatcatcaattaacgggatatcacattcttaaaaatctcaaaaacatagataaataataatttatccttcctcaaccaaatagcagcggaa 20804901  T
Q  118 ttaaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcat-aaaagttcagttaaacttcaataaatgaacacgtaaaaagatga 215  Q
    ||||| |||||| |||| |||||| | ||||| |||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||    
T  20804902 ttaaaatcaaatcatcataaagtccttgcacgtaggcctcattaaaacatctcataaaaatttcagttaaacttcaataaatgaacacgtaaaaa-atga 20805000  T
Q  216 agcatgcataacataaacc 234  Q
    |||||||||||||||||||    
T  20805001 agcatgcataacataaacc 20805019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 15 - 228
Target Start/End: Original strand, 33408507 - 33408720
Alignment:
Q  15 caataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctt-aaatcatagataaataataatttatcctttatcaacaaaacagcagc 113  Q
    |||| |||||||||| || |||  ||||||||||||||||||| |||||||| ||| |||||||||||||||||||||| ||  ||||| ||| ||||||    
T  33408507 caattatcagagtaaacaacaattaacgggatatcacattctt-aaaatcttcaaaacatagataaataataatttatctttcgtcaaccaaatagcagc 33408605  T
Q  114 ggaattaaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaaga 212  Q
    |||| ||||||  ||| |||| ||||||||||||||||||||||||| ||||||||||||||  ||||||  ||  || ||||||||||||||||||  |    
T  33408606 ggaaataaattataatcatcataaagtcttggcacgcaggcctcattaaaacatctcataaatattcagtctaatatc-ataaatgaacacgtaaaagaa 33408704  T
Q  213 tgaagcatgcataaca 228  Q
    ||||||||||||||||    
T  33408705 tgaagcatgcataaca 33408720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 223
Target Start/End: Original strand, 16673430 - 16673638
Alignment:
Q  15 caataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctt-aaatcatagataaataataatttatcctttatcaacaaaacagcagc 113  Q
    |||| |||||||||| || |||  ||||||||||||||||||||||| |||| |||  ||||||||||||||||||||| ||  ||||| ||| ||||||    
T  16673430 caattatcagagtaaacaacaattaacgggatatcacattcttaaaa-tcttcaaaagatagataaataataatttatctttcgtcaaccaaatagcagc 16673528  T
Q  114 ggaattaaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaaga 212  Q
    |||| ||||||| ||| |||| ||||||||||||||||||||||||| ||||||||||||||  ||||||  ||  || ||||||||||||||||||  |    
T  16673529 ggaaataaattctaatcatcataaagtcttggcacgcaggcctcattaaaacatctcataaatattcagtctaatatc-ataaatgaacacgtaaaagaa 16673627  T
Q  213 tgaagcatgca 223  Q
    |||||||||||    
T  16673628 tgaagcatgca 16673638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 17409741 - 17409887
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctt-aaatcatagataaataataatttatcctttatcaacaaaacagcagcgg 115  Q
    ||||||||||||| || ||   ||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||| |||||| ||| ||||||||    
T  17409741 ataatcagagtaaacaacatttaacgggatatcacattctt-aaaatcttcaaaacatagataaataataatttatccttcatcaaccaaatagcagcgg 17409839  T
Q  116 aattaaattcaaattatcaaaaagtcttggcacgcaggcctcattaaa 163  Q
    || ||||||| ||| |||| ||||||||||||||||||||||||||||    
T  17409840 aaataaattctaatcatcataaagtcttggcacgcaggcctcattaaa 17409887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 21367421 - 21367323
Alignment:
Q  136 aaagtcttggcacgcaggcctcattaaa-catctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcataacataaacc 234  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||| ||| ||| |||||||||||||||||  |||||||||||||| ||||||||    
T  21367421 aaagtcttggcacgcaggcctcattaaaacatctcataaaaattcagttcaacatca-taaatgaacacgtaaaagaatgaagcatgcatatcataaacc 21367323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 95
Target Start/End: Original strand, 13024570 - 13024623
Alignment:
Q  40 acgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    ||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||    
T  13024570 acgggatatcacacttcttaaaaatcttaaat---agataaataataatttatcctt 13024623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 13094734 - 13094807
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    |||||||||| || || | |||||||||||| | ||||||||||||||||||   ||||||||||||||||||||||    
T  13094734 atcagagtaaacaacatataacgggatatcagacttcttaaaaatcttaaat---agataaataataatttatcctt 13094807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 21502965 - 21502915
Alignment:
Q  137 aagtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaac 187  Q
    ||||||||||||||||||||||| |||||||||||||   |||||||||||    
T  21502965 aagtcttggcacgcaggcctcatcaaacatctcataattattcagttaaac 21502915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 21998431 - 21998358
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    |||||||||| || || | |||||||||||||| ||| ||||||||||||||   ||||||||||||||||||||||    
T  21998431 atcagagtaaacaacatataacgggatatcacacttcataaaaatcttaaat---agataaataataatttatcctt 21998358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 22142117 - 22142167
Alignment:
Q  137 aagtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaac 187  Q
    ||||||||||||| ||||||||| ||||||||||||||  |||||||||||    
T  22142117 aagtcttggcacgtaggcctcatcaaacatctcataaatattcagttaaac 22142167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 26012808 - 26012758
Alignment:
Q  137 aagtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaac 187  Q
    ||||||||||| ||||||||||| ||||||||||||||  |||||||||||    
T  26012808 aagtcttggcatgcaggcctcatcaaacatctcataaatattcagttaaac 26012758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 5890487 - 5890446
Alignment:
Q  134 aaaaagtcttggcacgcaggcctcattaaacatctcataaaa 175  Q
    |||||||||||||||| ||||||||| |||||||||||||||    
T  5890487 aaaaagtcttggcacgtaggcctcatcaaacatctcataaaa 5890446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 187
Target Start/End: Complemental strand, 20032469 - 20032420
Alignment:
Q  138 agtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaac 187  Q
    |||||||||||||||||||||| ||||| ||||||||| || ||||||||    
T  20032469 agtcttggcacgcaggcctcatcaaacaactcataaaaatttagttaaac 20032420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 24492807 - 24492858
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatc 92  Q
    |||||||||||||| ||||||||||||||||||   |||||||||||||||||||    
T  24492807 aacgggatatcacacttcttaaaaatcttaaat---agataaataataatttatc 24492858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 174
Target Start/End: Complemental strand, 19661729 - 19661564
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatccttta---------tcaacaaaa 106  Q
    ||||||||||||| || || | |||||||||||||| ||||||||| ||| |||  ||||||||||||||||||||| || |         |||||| ||    
T  19661729 ataatcagagtaaacaacatataacgggatatcacacttcttaaaa-tctcaaa--atagataaataataatttatctttcaacataaacttcaacataa 19661633  T
Q  107 cagcagcggaattaaattcaaattatcaaaaagtcttggcacgcaggcctcattaaa--catctcataaa 174  Q
     |||||||||||||||||||| ||   ||| | |||||||||||||||||||| |||  |||||||||||    
T  19661632 -agcagcggaattaaattcaacttcataaataatcttggcacgcaggcctcataaaagtcatctcataaa 19661564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 25418824 - 25418890
Alignment:
Q  108 agcagcggaattaaattcaa-attatcaaaaagtcttggcacgcaggcctcat-taaacatctcataa 173  Q
    |||||||||||||||||||| |  || ||||||||||||||||||||||||||  |||||||||||||    
T  25418824 agcagcggaattaaattcaacaccat-aaaaagtcttggcacgcaggcctcataaaaacatctcataa 25418890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 1693331 - 1693298
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  1693331 atcagagtaaacatcaaacaacgggatatcacat 1693298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 18039563 - 18039530
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  18039563 atcagagtaaacatcaaacaacgggatatcacat 18039530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 22264164 - 22264197
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  22264164 atcagagtaaacatcaaacaacgggatatcacat 22264197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 24473139 - 24473106
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  24473139 atcagagtaaacatcaaacaacgggatatcacat 24473106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 27664682 - 27664649
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  27664682 atcagagtaaacatcaaacaacgggatatcacat 27664649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 27671321 - 27671288
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  27671321 atcagagtaaacatcaaacaacgggatatcacat 27671288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 27681581 - 27681548
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  27681581 atcagagtaaacatcaaacaacgggatatcacat 27681548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 27688223 - 27688190
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  27688223 atcagagtaaacatcaaacaacgggatatcacat 27688190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 41099115 - 41099082
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  41099115 atcagagtaaacatcaaacaacgggatatcacat 41099082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 159
Target Start/End: Complemental strand, 21293763 - 21293711
Alignment:
Q  108 agcagcggaattaaattcaaa-ttatcaaaaagtcttggcacgcaggcctcat 159  Q
    ||||||||||||||||||||| ||   ||| ||||||||||||||||||||||    
T  21293763 agcagcggaattaaattcaaaattcataaatagtcttggcacgcaggcctcat 21293711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 21330301 - 21330252
Alignment:
Q  137 aagtcttggcacgcaggcctcat-taaacatctcataaaagttcagttaaac 187  Q
    |||||||||||||||||||||||  ||||||||||||||  |||||||||||    
T  21330301 aagtcttggcacgcaggcctcatcaaaacatctcataaa--ttcagttaaac 21330252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 173
Target Start/End: Complemental strand, 21742808 - 21742772
Alignment:
Q  137 aagtcttggcacgcaggcctcattaaacatctcataa 173  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  21742808 aagtcttggcacgcaggcctcatcaaatatctcataa 21742772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 173
Target Start/End: Original strand, 25430745 - 25430785
Alignment:
Q  134 aaaaagtcttggcacgcaggcctcat-taaacatctcataa 173  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  25430745 aaaaagtcttggcacgcaggcctcataaaaacatctcataa 25430785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 173
Target Start/End: Complemental strand, 29916370 - 29916334
Alignment:
Q  137 aagtcttggcacgcaggcctcattaaacatctcataa 173  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  29916370 aagtcttggcacgcaggcctcatcaaatatctcataa 29916334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 17 - 234
Target Start/End: Complemental strand, 257 - 38
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctta-aatcatagataaataataatttatcctttatcaacaaaacagcagcgg 115  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||||| | || ||||||||||||||||||||||||| |||||| ||| ||||||||    
T  257 ataatcagagtaatcatcaattaacgggttatcacattcttaaaaatctcataaacatagataaataataatttatccttcatcaaccaaatagcagcgg 158  T
Q  116 aattaaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatg 214  Q
    |||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||  |||    
T  157 aattaaattcaaatcatcataaagtcttggcacgcaggcctcattaaaacatctcataaaatttaagttaaacttcaataaatgaacacgtaaaagaatg 58  T
Q  215 aagcatgcataacataaacc 234  Q
    ||||||||||||||||||||    
T  57 aagcatgcataacataaacc 38  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 144; Significance: 7e-76; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 20 - 234
Target Start/End: Complemental strand, 26197294 - 26197079
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaatt 119  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  26197294 atcagagtaatcatcaaataacgggatatcacattcttaaaaaccttaaaacatagataaataataatttatccttcatcgacaaaactgcagcggaatt 26197195  T
Q  120 aaattcaaattatcaaaaagtcttggcacgcaggcctcat-taaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagc 218  Q
    |||||||||   ||| ||||||||||||||||||||||||  ||| ||||||||||| ||||||||||||||||||||||||||| |||||  |||||||    
T  26197194 aaattcaaaacttcataaagtcttggcacgcaggcctcataaaaatatctcataaaatttcagttaaacttcaataaatgaacacataaaagaatgaagc 26197095  T
Q  219 atgcataacataaacc 234  Q
    ||||||||||||||||    
T  26197094 atgcataacataaacc 26197079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 20 - 236
Target Start/End: Complemental strand, 12038598 - 12038384
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaatt 119  Q
    |||||||||||||||||| ||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||| |   ||||||| | |||||||||    
T  12038598 atcagagtaatcatcaaataacgggatatcacattcttaaaaacattaaaacatagataaataataatttatccttcaatgacaaaactgtagcggaatt 12038499  T
Q  120 aaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagc 218  Q
    |||||||||| |||| ||||||||||||||||| ||||||| |||||| |||||||| ||||||||||| || ||||||||| | ||||||  |||||||    
T  12038498 aaattcaaatcatcataaagtcttggcacgcagacctcattaaaacat-tcataaaa-ttcagttaaacatc-ataaatgaatatgtaaaagaatgaagc 12038402  T
Q  219 atgcataacataaacctc 236  Q
    ||||||| ||||||||||    
T  12038401 atgcatatcataaacctc 12038384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 11302912 - 11302696
Alignment:
Q  19 aatcagagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaat-catagataaataataatttatcctttatcaacaaaacagcagcggaa 117  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||||||||  |||||||||||||||||||| |||| |||||| ||| ||||||||||    
T  11302912 aatcaaagtaatcatcaattaacgggatatcacattcttaaaaatcttaaaaacatagataaataataatttaaccttcatcaaccaaatagcagcggaa 11302813  T
Q  118 ttaaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaa 216  Q
    |||||||||||| |||| ||||| |||||||||| |||| ||| ||||||||||||| | |||||| |||  || |||||||||||| |||||  |||||    
T  11302812 ttaaattcaaatcatcataaagttttggcacgcaagccttattaaaacatctcataataattcagtcaaatatc-ataaatgaacacctaaaagaatgaa 11302714  T
Q  217 gcatgcataacataaacc 234  Q
    ||||||||| ||||||||    
T  11302713 gcatgcatatcataaacc 11302696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 39 - 234
Target Start/End: Original strand, 12502760 - 12502958
Alignment:
Q  39 aacgggatatcacattcttaa--aaatctt-aaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaaattatcaa 135  Q
    |||||||||||||||||||||  ||||||| ||| ||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||| ||||     
T  12502760 aacgggatatcacattcttaacaaaatcttcaaaacatagataaataataatttatccttcatcaaccaaatagcagcggaattaaattcaaatcatcat 12502859  T
Q  136 aaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcataacataaacc 234  Q
    ||||||||||||||||||||||||| ||||||||||||| | |||| |  ||  || ||||||||||||||||||  |||||||||||||| ||||||||    
T  12502860 aaagtcttggcacgcaggcctcattaaaacatctcataataattcaatctaatatc-ataaatgaacacgtaaaagaatgaagcatgcatatcataaacc 12502958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 17 - 221
Target Start/End: Complemental strand, 328002 - 327798
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctt-aaatcatagataaataataatttatcctttatcaacaaaacagcagcgg 115  Q
    ||||||||||||| || ||   ||| |||||| ||||||||||||||||| ||| ||||||||||||||||||||||||| |||||| ||| |||||||     
T  328002 ataatcagagtaaacaacagttaacaggatattacattcttaaaaatcttcaaaacatagataaataataatttatccttcatcaaccaaatagcagcga 327903  T
Q  116 aattaaattcaaattatcaaaaagtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatga 215  Q
    || ||||||| ||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||  ||  || ||||||||||||||||||  ||||    
T  327902 aaataaattctaatcatcataaagtcttggcacgcaggcctcattaaacatctcataataattcagtctaatatc-ataaatgaacacgtaaaagaatga 327804  T
Q  216 agcatg 221  Q
    ||||||    
T  327803 agcatg 327798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 15 - 228
Target Start/End: Original strand, 38813662 - 38813875
Alignment:
Q  15 caataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctt-aaatcatagataaataataatttatcctttatcaacaaaacagcagc 113  Q
    |||| |||||||||| || |||  ||||||||||||||||| |||||||||| ||| ||| |||||||||||||||||| ||  ||||| ||| ||||||    
T  38813662 caattatcagagtaaacaacaattaacgggatatcacattc-taaaaatcttcaaaacatggataaataataatttatctttcgtcaaccaaatagcagc 38813760  T
Q  114 ggaattaaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaaga 212  Q
    |||| ||||||| ||| |||| ||||||||||||| ||||||||||| ||||||||||||||  ||||||  ||  || ||||||||||||||||||  |    
T  38813761 ggaaataaattctaatcatcataaagtcttggcacacaggcctcattaaaacatctcataaatattcagtctaatatc-ataaatgaacacgtaaaagaa 38813859  T
Q  213 tgaagcatgcataaca 228  Q
    ||||||||||||||||    
T  38813860 tgaagcatgcataaca 38813875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 39 - 223
Target Start/End: Original strand, 51694788 - 51694972
Alignment:
Q  39 aacgggatatcacattcttaaaaatctt-aaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaaattatcaaaa 137  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||||||| |||||| ||| |||||||||| ||||||| ||| |||| ||    
T  51694788 aacgggatatcacattctt-aaaatcttcaaaacatagataaataacaatttatccttcatcaaccaaatagcagcggaaataaattctaatcatcataa 51694886  T
Q  138 agtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgca 223  Q
    |||||||||||||| |||| ||| |||||| |||||| ||||||||  ||  || ||||||||||||||||||  ||||||||||||    
T  51694887 agtcttggcacgcatgcctaattaaaacatttcataatagttcagtctaatatc-ataaatgaacacgtaaaagaatgaagcatgca 51694972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 223
Target Start/End: Original strand, 3832951 - 3833159
Alignment:
Q  15 caataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctt-aaatcatagataaataataatttatcctttatcaacaaaacagcagc 113  Q
    |||| |||||||||| || |||  ||||||||||||||||||| |||||||| ||| |||||||||||||||||||||| || || ||| ||| ||||||    
T  3832951 caattatcagagtaaacaacaattaacgggatatcacattctt-aaaatcttcaaaacatagataaataataatttatctttcatgaaccaaatagcagc 3833049  T
Q  114 ggaattaaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaaga 212  Q
    |||| ||||||| | | |||| |||||||||||| |||||||||||| ||||||||||||||  ||||||  ||  || |||||||||||||| |||  |    
T  3833050 ggaaataaattctattcatcataaagtcttggcatgcaggcctcattaaaacatctcataaatattcagtctaatatc-ataaatgaacacgtgaaagaa 3833148  T
Q  213 tgaagcatgca 223  Q
    |||||||||||    
T  3833149 tgaagcatgca 3833159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 2898643 - 2898505
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaatt 119  Q
    |||||||||| || |||  |||||||||||||||||||||||   | ||| ||||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  2898643 atcagagtaaacaacaattaacgggatatcacattcttaaaaccttcaaaacatagataaataataatttatccttcatcgacaaaactgcagcggaatt 2898544  T
Q  120 aaattc-aaattatcaa-aaagtcttggcacgcaggcct 156  Q
    |||||| |||| || || ||||||||||||| |||||||    
T  2898543 aaattcaaaatcataaataaagtcttggcacacaggcct 2898505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 126 - 234
Target Start/End: Original strand, 321944 - 322051
Alignment:
Q  126 aaattatcaaaaagtcttggcacgcaggcctcattaaa-catctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcat 224  Q
    ||||||| |||  |||||||||||||||||| || ||| |||||||||||| ||||||||||| ||| |||||||||||||||||  |||||||||||||    
T  321944 aaattataaaattgtcttggcacgcaggcctaataaaaacatctcataaaa-ttcagttaaacatca-taaatgaacacgtaaaagaatgaagcatgcat 322041  T
Q  225 aacataaacc 234  Q
    | ||||||||    
T  322042 atcataaacc 322051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 234
Target Start/End: Original strand, 12495620 - 12495717
Alignment:
Q  136 aaagtcttggcacgcaggcctcattaaa-catctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcataacataaacc 234  Q
    |||||||||||||| ||||||||||||| |||||||||||| ||||||| ||| ||| |||||||||| ||||||  |||||||||||||| ||||||||    
T  12495620 aaagtcttggcacgaaggcctcattaaaacatctcataaaa-ttcagttcaacatca-taaatgaacaagtaaaagaatgaagcatgcatatcataaacc 12495717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 73 - 187
Target Start/End: Complemental strand, 13211162 - 13211050
Alignment:
Q  73 tagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaa-attatcaaaaagtcttggcacgcaggcctcat-taaacatctca 170  Q
    ||||||||||||||||||||||| |||||||||| |||||||| ||| ||||||| || || ||||||||||||||||||| ||||||  ||| ||||||    
T  13211162 tagataaataataatttatccttcatcaacaaaatagcagcgg-atttaattcaacatcat-aaaaagtcttggcacgcagacctcatcaaaatatctca 13211065  T
Q  171 taaaagttcagttaaac 187  Q
    |||||  ||||||||||    
T  13211064 taaaa--tcagttaaac 13211050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 234
Target Start/End: Original strand, 14447500 - 14447597
Alignment:
Q  136 aaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcataacataaacc 234  Q
    |||||||||||||||| |||||||| ||||||||||||||| ||||||| ||| || |||||  |||||||||||  |||||||||||||| ||||||||    
T  14447500 aaagtcttggcacgcaagcctcattaaaacatctcataaaa-ttcagttcaacatc-ataaacaaacacgtaaaagaatgaagcatgcatatcataaacc 14447597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 39 - 187
Target Start/End: Original strand, 12398465 - 12398610
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaa-attatcaaa 136  Q
    |||||||||||||| ||||||||||||||||| ||  ||||| |||  | |||||||| |||| || || |||||||||||||| ||||| || || |||    
T  12398465 aacgggatatcacacttcttaaaaatcttaaaaca--gataattaactaattatccttcatcatcataatagcagcggaattaa-ttcaacatcat-aaa 12398560  T
Q  137 aagtcttggcacgcaggcctcat-taaacatctcataaaagttcagttaaac 187  Q
    |||||||||||||||||||||||  ||| ||||||||||  |||||||||||    
T  12398561 aagtcttggcacgcaggcctcatcaaaatatctcataaa--ttcagttaaac 12398610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 18382926 - 18382997
Alignment:
Q  161 aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcataacataaacc 234  Q
    ||||||||||||||| ||||||||||| ||| |||||||||||||||||  |||||||||||||| ||||||||    
T  18382926 aaacatctcataaaa-ttcagttaaacatca-taaatgaacacgtaaaagaatgaagcatgcatatcataaacc 18382997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 234
Target Start/End: Complemental strand, 18384666 - 18384572
Alignment:
Q  139 gtcttggcacgcaggcctcattaaac-atctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcataacataaacc 234  Q
    |||||||||||||| ||| || |||  ||||||||||| ||||||||||| ||| |||||||||||||||||  |||||||||||||| ||||||||    
T  18384666 gtcttggcacgcagacctaatcaaaatatctcataaaa-ttcagttaaacatca-taaatgaacacgtaaaagaatgaagcatgcatatcataaacc 18384572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 159
Target Start/End: Original strand, 13441594 - 13441712
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaa-attatcaaa 136  Q
    |||||||||||||| ||||||||||||||| | || |  ||| |||  | |||||||| ||||||| || |||||||||||||| ||||| || || |||    
T  13441594 aacgggatatcacacttcttaaaaatcttagaacaaa--taattaagtaattatccttcatcaacataatagcagcggaattaa-ttcaacatcat-aaa 13441689  T
Q  137 aagtcttggcacgcaggcctcat 159  Q
    |||||||||||||||||||||||    
T  13441690 aagtcttggcacgcaggcctcat 13441712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 125
Target Start/End: Complemental strand, 23078234 - 23078149
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaaattc 125  Q
    |||||||||||||| ||||||||| ||| |||| || |||||||||||||||| |||| |||||||||| |||| ||||||| |||||    
T  23078234 aacgggatatcacacttcttaaaa-tctcaaat-atggataaataataatttacccttcatcaacaaaatagcaacggaatttaattc 23078149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 26682593 - 26682647
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    |||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||    
T  26682593 aacgggatatcacacttcttaaaaatcttaaat---agataaataataatttatcctt 26682647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 14233795 - 14233845
Alignment:
Q  137 aagtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaac 187  Q
    ||||||||||||||||||||||| |||||||||||||   |||||||||||    
T  14233795 aagtcttggcacgcaggcctcatcaaacatctcataattattcagttaaac 14233845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 175
Target Start/End: Original strand, 22791132 - 22791173
Alignment:
Q  134 aaaaagtcttggcacgcaggcctcattaaacatctcataaaa 175  Q
    |||||||||||||||| ||||||||| |||||||||||||||    
T  22791132 aaaaagtcttggcacgtaggcctcatcaaacatctcataaaa 22791173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 30025305 - 30025382
Alignment:
Q  17 ataatcagagtaa-tcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    ||||||||||||| |||||| | |||||||||||||| |||||||||||| ||||  |||||||||||| |||||||||||    
T  30025305 ataatcagagtaaatcatcaca-aacgggatatcacacttcttaaaaatcgtaaa--atagataaataacaatttatcctt 30025382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 30027788 - 30027865
Alignment:
Q  17 ataatcagagtaa-tcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    ||||||||||||| |||||| | |||||||||||||| |||||||||||| ||||  |||||||||||| |||||||||||    
T  30027788 ataatcagagtaaatcatcaca-aacgggatatcacacttcttaaaaatcgtaaa--atagataaataaaaatttatcctt 30027865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 159
Target Start/End: Complemental strand, 20700123 - 20700062
Alignment:
Q  97 atcaacaaaacagcagcggaattaaattcaaattatca-aaaagtcttggcacgcaggcctcat 159  Q
    ||||||| || ||||||||||||||||||||   |||| |||||||||||||||||||||||||    
T  20700123 atcaacataatagcagcggaattaaattcaac--atcataaaagtcttggcacgcaggcctcat 20700062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 187
Target Start/End: Complemental strand, 23083928 - 23083840
Alignment:
Q  97 atcaacaaaacagcagcggaattaaattcaaattatcaaaaagtcttggcacgcaggcctcat-taaacatctcataaaagttcagttaaac 187  Q
    ||||||| || ||||||||| |||||||||| ||   ||| ||||||||||||||||||||||  |||||||||||  ||||||||||||||    
T  23083928 atcaacataatagcagcgga-ttaaattcaacttcataaatagtcttggcacgcaggcctcataaaaacatctcat--aagttcagttaaac 23083840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 25477184 - 25477117
Alignment:
Q  108 agcagcggaattaaattcaa-attatcaaaaagtcttggcacgcaggcctcat-taaacatctcataaa 174  Q
    |||||||||||||||||||| || || ||| ||||||||||||||||||||||  ||||||||||||||    
T  25477184 agcagcggaattaaattcaacatcat-aaatagtcttggcacgcaggcctcatccaaacatctcataaa 25477117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 15467218 - 15467269
Alignment:
Q  137 aagtcttggcacgcaggcctcat-taaacatctcataaaagttcagttaaac 187  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||||||    
T  15467218 aagtcttggcacgcaggcctcatcaaaacatctcataattgttcagttaaac 15467269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 18437773 - 18437827
Alignment:
Q  39 aacgggatatcacatt-cttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    |||||||||||||||| ||||||||||||||||   ||||||||||||| ||||||||    
T  18437773 aacgggatatcacatttcttaaaaatcttaaat---agataaataataagttatcctt 18437827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 1466707 - 1466657
Alignment:
Q  137 aagtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaac 187  Q
    ||||||||||||||||||||||| ||| |||||||||   |||||||||||    
T  1466707 aagtcttggcacgcaggcctcatcaaatatctcataattattcagttaaac 1466657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 15051257 - 15051314
Alignment:
Q  177 ttcagttaaacttcaataaatgaacacgtaaa-aagatgaagcatgcataacataaacc 234  Q
    ||||||||||| ||| |||||||||||||||| || |||||||||||||| ||||||||    
T  15051257 ttcagttaaacatca-taaatgaacacgtaaagaaaatgaagcatgcatatcataaacc 15051314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 2028492 - 2028459
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  2028492 atcagagtaaacatcaaacaacgggatatcacat 2028459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 5107775 - 5107742
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  5107775 atcagagtaaacatcaaacaacgggatatcacat 5107742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 11425487 - 11425434
Alignment:
Q  134 aaaaagtcttggcacgcaggcctcattaaa--catctcataaaagttcagttaaac 187  Q
    |||||||||||||||||||||||||| |||  ||||||||  ||||||||||||||    
T  11425487 aaaaagtcttggcacgcaggcctcataaaaatcatctcat--aagttcagttaaac 11425434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 12842565 - 12842532
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  12842565 atcagagtaaacatcaaacaacgggatatcacat 12842532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 30024037 - 30024114
Alignment:
Q  17 ataatcagagtaa-tcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    ||||||||||||| |||||| | |||||||||||||| |||||||||||| ||||  ||| |||||||| |||||||||||    
T  30024037 ataatcagagtaaatcatcaca-aacgggatatcacacttcttaaaaatcgtaaa--atatataaataacaatttatcctt 30024114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 30029057 - 30029134
Alignment:
Q  17 ataatcagagtaa-tcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    ||||||||||||| |||||| | |||||||||||||| ||| |||||||| ||||  |||||||||||| |||||||||||    
T  30029057 ataatcagagtaaatcatcaca-aacgggatatcacacttcataaaaatcgtaaa--atagataaataacaatttatcctt 30029134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 37614606 - 37614639
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  37614606 atcagagtaaacatcaaacaacgggatatcacat 37614639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 14129647 - 14129607
Alignment:
Q  15 caataatcagagtaatcatcaaacaacgggatatcacattc 55  Q
    |||| |||||||||| ||||||| |||||||||||||||||    
T  14129647 caattatcagagtaaacatcaaataacgggatatcacattc 14129607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 17487217 - 17487269
Alignment:
Q  135 aaaagtcttggcacgcaggcctcattaaa--catctcataaaagttcagttaaac 187  Q
    ||||||||||||||||||||||||| |||  |||||||||||  |||||||||||    
T  17487217 aaaagtcttggcacgcaggcctcataaaagtcatctcataaa--ttcagttaaac 17487269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 144; Significance: 7e-76; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 20 - 234
Target Start/End: Complemental strand, 25964603 - 25964390
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaatt 119  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  25964603 atcagagtaatcatcaaataacgggatatcacattcttaaaaaccttaaaacatagataaataataatttatccttcatcgacaaaactgcagcggaatt 25964504  T
Q  120 aaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagc 218  Q
    |||||||||| || ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| | || ||||||||||||||||||  |||||||    
T  25964503 aaattcaaatcattaaaaagtcttggcacgcaggcctcattaaaacatctcataaaa-ttcagttaatcatc-ataaatgaacacgtaaaagaatgaagc 25964406  T
Q  219 atgcataacataaacc 234  Q
    ||||||||||||||||    
T  25964405 atgcataacataaacc 25964390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 17 - 234
Target Start/End: Complemental strand, 24704054 - 24703835
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctta-aatcatagataaataataatttatcctttatcaacaaaacagcagcgg 115  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||| | || | ||| ||||||||||||||||||| |||||| ||| ||||||||    
T  24704054 ataatcagagtaatcatcaattaacgggatatcacattcttaaaaatctcagaaacgtaggtaaataataatttatccttcatcaaccaaaaagcagcgg 24703955  T
Q  116 aattaaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatg 214  Q
    |||||||||||||| |||| |||||||||||||| |||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||  |||    
T  24703954 aattaaattcaaatcatcataaagtcttggcacgtaggcctcattaaaacatctcataaaaattcggttaaacttcaataaatgaacacgtaaaagaatg 24703855  T
Q  215 aagcatgcataacataaacc 234  Q
    ||||||||||| ||||||||    
T  24703854 aagcatgcatatcataaacc 24703835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 17 - 234
Target Start/End: Complemental strand, 24717394 - 24717175
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatct--taaatcatagataaataataatttatcctttatcaacaaaacagcagcg 114  Q
    ||||||||||||||||||||  || ||||||||||||||||||||||||  |||||  ||| ||||||||||||||||||| | |||| ||| |||||||    
T  24717394 ataatcagagtaatcatcaattaatgggatatcacattcttaaaaatctcataaatg-taggtaaataataatttatccttcaccaaccaaaaagcagcg 24717296  T
Q  115 gaattaaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagat 213  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||| ||||| ||||||||| ||| |||||||||||||||||||||||||||||  ||    
T  24717295 gaattaaattcaaatcatcataaagtcttggcacgcaggcctcattaaaacaactcataaaaattcggttaaacttcaataaatgaacacgtaaaagaat 24717196  T
Q  214 gaagcatgcataacataaacc 234  Q
    |||| |||||||  |||||||    
T  24717195 gaagtatgcatattataaacc 24717175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 20 - 236
Target Start/End: Original strand, 37523942 - 37524155
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaatt 119  Q
    ||||||| |||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  37523942 atcagagaaatcatcaaataacgggatatcacattcttaaaaaccttaaaacatagataaataataatttatccttcatcgacaaaactgcagcggaatt 37524041  T
Q  120 aaattcaaattatcaaaaagtcttggcacgcaggcctc-attaaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagc 218  Q
    |||||||||| ||| | ||||||||||||||||||||| || |||||| |||||||| |||||||||||  | ||||||||| || |||||  |||||||    
T  37524042 aaattcaaatcatc-ataagtcttggcacgcaggcctcaataaaacat-tcataaaa-ttcagttaaac-accataaatgaatacataaaagaatgaagc 37524137  T
Q  219 atgcataacataaacctc 236  Q
    ||||||| ||||||||||    
T  37524138 atgcatatcataaacctc 37524155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 17 - 223
Target Start/End: Complemental strand, 19692471 - 19692266
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctt-aaatcatagataaataataatttatcctttatcaacaaaacagcagcgg 115  Q
    ||||||||||||| || |||  ||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||| |||||| ||| ||||||||    
T  19692471 ataatcagagtaaacaacaattaacgggatatcacattcttaaaa-tcttcaaaacatagataaataataatttatccttcatcaaccaaatagcagcgg 19692373  T
Q  116 aattaaattcaaattatcaaaaagtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatga 215  Q
    || ||||||| ||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||  ||| || ||||||||||||||||||  ||||    
T  19692372 aaataaattctaatcatcataaagtcttggcacgcaggcctcattaaacatctcataataattcagtctaacatc-ataaatgaacacgtaaaagaatga 19692274  T
Q  216 agcatgca 223  Q
    ||||||||    
T  19692273 agcatgca 19692266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 234
Target Start/End: Complemental strand, 21319539 - 21319324
Alignment:
Q  18 taatcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcgga 116  Q
    |||||||||||| || || | |||||||||||||| ||||||||| ||| |||   ||||||||||||||||||||||| |||||||||| |||||||||    
T  21319539 taatcagagtaaacaacataaaacgggatatcacacttcttaaaa-tctcaaaag-tagataaataataatttatccttcatcaacaaaatagcagcgga 21319442  T
Q  117 attaaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatga 215  Q
    ||||||||||||  |||| |||||||||||| |||||||||||| ||||||||||||| | || |||  ||  || ||||| ||||||||||||  ||||    
T  21319441 attaaattcaaaacatcataaagtcttggcatgcaggcctcattaaaacatctcataataattaagtctaatatc-ataaacgaacacgtaaaagaatga 21319343  T
Q  216 agcatgcataacataaacc 234  Q
    |||||||||| ||||||||    
T  21319342 agcatgcatatcataaacc 21319324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 234
Target Start/End: Complemental strand, 21328470 - 21328255
Alignment:
Q  18 taatcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatct-taaatcatagataaataataatttatcctttatcaacaaaacagcagcgg 115  Q
    |||||||||||| || || | |||||||||||||| ||||||||| ||| ||||   ||||||||||||||||||||||| |||||||||| ||||||||    
T  21328470 taatcagagtaaacaacataaaacgggatatcacacttcttaaaa-tctctaaag--tagataaataataatttatccttcatcaacaaaatagcagcgg 21328374  T
Q  116 aattaaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatg 214  Q
    |||||||||||||  |||| ||||||||||||||||||||||||| ||||||||||||| | ||||||  ||  || ||||| ||||| | ||||  |||    
T  21328373 aattaaattcaaaacatcataaagtcttggcacgcaggcctcattaaaacatctcataataattcagtctaatatc-ataaacgaacatgaaaaagaatg 21328275  T
Q  215 aagcatgcataacataaacc 234  Q
    ||||||||||| ||||||||    
T  21328274 aagcatgcatatcataaacc 21328255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 22812692 - 22812595
Alignment:
Q  136 aaagtcttggcacgcaggcctcattaaa-catctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcataacataaacc 234  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||| || ||| |||||||||||||||||  |||||||||||||||||||||||    
T  22812692 aaagtcttggcacgcaggcctcattaaaacatctcataaa-gttcagttagacatca-taaatgaacacgtaaaagaatgaagcatgcataacataaacc 22812595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 159
Target Start/End: Complemental strand, 21901311 - 21901193
Alignment:
Q  39 aacgggatatcacatt-cttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaa-attatcaaa 136  Q
    |||||||||||||||| ||||||||||||||| ||  ||||| |||  | |||||||| ||||||| || |||||||||||||| ||||| || || |||    
T  21901311 aacgggatatcacatttcttaaaaatcttaaaaca--gataattaactaattatccttcatcaacataatagcagcggaattaa-ttcaacatcat-aaa 21901216  T
Q  137 aagtcttggcacgcaggcctcat 159  Q
    |||||||||||||||||||||||    
T  21901215 aagtcttggcacgcaggcctcat 21901193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 24085838 - 24085772
Alignment:
Q  108 agcagcggaattaaattcaa-attatcaaaaagtcttggcacgcaggcctcattaaacatctcataaa 174  Q
    |||||||||||||||||||| || || |||||||||||||||||||||||||| ||||| ||||||||    
T  24085838 agcagcggaattaaattcaacatcat-aaaaagtcttggcacgcaggcctcatcaaacacctcataaa 24085772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 22336372 - 22336426
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    |||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||    
T  22336372 aacgggatatcacacttcttaaaaatcttaaat---agataaataataatttatcctt 22336426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 174
Target Start/End: Complemental strand, 23072847 - 23072680
Alignment:
Q  15 caataatcagagtaat-catcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatccttta---------tcaaca 103  Q
    |||||||||||||||  |||||   |||||||||||||| ||||||||| ||| |||  |||||||||||||||||||||||| |         ||||||    
T  23072847 caataatcagagtaaaacatcatgaaacgggatatcacacttcttaaaa-tctcaaa--atagataaataataatttatccttcaacataaacttcaaca 23072751  T
Q  104 aaacagcagcggaattaaattcaaattatcaaaaagtcttggcacgcaggcctcattaaacatctcataaa 174  Q
     || |||||||||||||||||||| ||   |||  ||||||||||| ||||||||| |||||| |||||||    
T  23072750 taaaagcagcggaattaaattcaacttcataaattgtcttggcacgtaggcctcatcaaacatgtcataaa 23072680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 23713685 - 23713635
Alignment:
Q  137 aagtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaac 187  Q
    ||||||||||||||||||||||| |||||||||||||   |||||||||||    
T  23713685 aagtcttggcacgcaggcctcatcaaacatctcataattattcagttaaac 23713635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 20321885 - 20321960
Alignment:
Q  18 taatcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcct 94  Q
    |||||||||||| || || | |||||||||||||| ||||||||| |||||||  |||||||||||||||||||||||    
T  20321885 taatcagagtaaacaacatataacgggatatcacacttcttaaaa-tcttaaaa-atagataaataataatttatcct 20321960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 23285677 - 23285733
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatccttta 97  Q
    |||||||||||||| ||||||||||||| ||||   ||||||||||||||||||||||||    
T  23285677 aacgggatatcacacttcttaaaaatctcaaat---agataaataataatttatccttta 23285733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 174
Target Start/End: Original strand, 23059818 - 23059896
Alignment:
Q  97 atcaacaaaacagcagcggaattaaattcaa-attatcaaaaagtcttggcacgcaggcctcat-taaacatctcataaa 174  Q
    ||||||| || || ||||||||||||||||| || || ||| ||||||||||||||||||||||  ||||||||||||||    
T  23059818 atcaacataatagtagcggaattaaattcaatatcat-aaatagtcttggcacgcaggcctcatccaaacatctcataaa 23059896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 27345295 - 27345214
Alignment:
Q  15 caataatcagagtaat-catcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    |||||||||||||||  |||||   |||||||||||||| ||||||||| ||| |||  ||||||||||||||||||||||||    
T  27345295 caataatcagagtaaaacatcatgaaacgggatatcacacttcttaaaagtctcaaaa-atagataaataataatttatcctt 27345214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 22321879 - 22321846
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  22321879 atcagagtaaacatcaaacaacgggatatcacat 22321846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 22328032 - 22327999
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  22328032 atcagagtaaacatcaaacaacgggatatcacat 22327999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 22499995 - 22500032
Alignment:
Q  138 agtcttggcacgcaggcctcattaaacatctcataaaa 175  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  22499995 agtcttggcacgaaggcctcatcaaacatctcataaaa 22500032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 24261191 - 24261224
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  24261191 atcagagtaaacatcaaacaacgggatatcacat 24261224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 24266274 - 24266307
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  24266274 atcagagtaaacatcaaacaacgggatatcacat 24266307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 25191828 - 25191795
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  25191828 atcagagtaaacatcaaacaacgggatatcacat 25191795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 28432822 - 28432789
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    ||||||||||||||||| ||||||||||||||||    
T  28432822 atcagagtaatcatcaatcaacgggatatcacat 28432789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 33484810 - 33484843
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  33484810 atcagagtaaacatcaaacaacgggatatcacat 33484843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 23655285 - 23655206
Alignment:
Q  15 caataatcagagtaat-catcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    |||||||||||||||  |||||   |||||||||||||| ||| ||||||||| ||||   ||||||||||||||||||||||    
T  23655285 caataatcagagtaaaacatcatgaaacgggatatcacacttcctaaaaatctcaaat---agataaataataatttatcctt 23655206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 24689095 - 24689046
Alignment:
Q  137 aagtcttggcacgcaggcctcat-taaacatctcataaaagttcagttaaac 187  Q
    |||||||||||||||||||||||  ||||||||||||||  |||||||||||    
T  24689095 aagtcttggcacgcaggcctcatcaaaacatctcataaa--ttcagttaaac 24689046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 40427703 - 40427743
Alignment:
Q  15 caataatcagagtaatcatcaaacaacgggatatcacattc 55  Q
    |||| |||||||||||||||||  |||||||||||||||||    
T  40427703 caattatcagagtaatcatcaattaacgggatatcacattc 40427743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 142; Significance: 1e-74; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 22011535 - 22011318
Alignment:
Q  19 aatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctta-aatcatagataaataataatttatcctttatcaacaaaacagcagcggaa 117  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||| | || |||||||||||||||||||||||||  ||||| ||| ||||||||||    
T  22011535 aatcagagtaatcatcaattaacgggatatcacattcttaaaaatctcagaaacatagataaataataatttatccttcttcaaccaaagagcagcggaa 22011436  T
Q  118 ttaaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaa 216  Q
    |||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||| |||| |||| |||||||||||||||||||||||  |||||    
T  22011435 ttaaattcaaatcatcataaagtcttggcacgcaggcctcattaaaacatctcataaaatttcaattaatcttcaataaatgaacacgtaaaagaatgaa 22011336  T
Q  217 gcatgcataacataaacc 234  Q
    ||||||||||||||||||    
T  22011335 gcatgcataacataaacc 22011318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 234
Target Start/End: Complemental strand, 15603845 - 15603634
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaatt 119  Q
    ||||||||||||| |||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||| ||||||| |||||||| ||    
T  15603845 atcagagtaatcaacaaataacgggatatcacattcttaaaaaccttaaaacatagataaataataatttatccttcatcgacaaaactgcagcggattt 15603746  T
Q  120 aaattcaaattatcaaaaagtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagca 219  Q
    |||||||||| ||| | |||||||||||||||||||||||||||    |||||||| ||||||||||| || ||||||||| ||||||||  ||||||||    
T  15603745 aaattcaaatcatc-ataagtcttggcacgcaggcctcattaaaacgttcataaaa-ttcagttaaacatc-ataaatgaatacgtaaaagaatgaagca 15603649  T
Q  220 tgcataacataaacc 234  Q
    |||||| ||||||||    
T  15603648 tgcatatcataaacc 15603634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 23 - 236
Target Start/End: Complemental strand, 16411132 - 16410919
Alignment:
Q  23 agagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaat-catagataaataataatttatcctttatcaacaaaacagcagcggaattaa 121  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||  |||||||||||||||||||| |||| |||||| ||| ||||||||||||||    
T  16411132 agagtaatcatcaattaacgggatatcacattcttaaaaatcttaaaaacatagataaataataatttacccttcatcaaccaaatagcagcggaattaa 16411033  T
Q  122 attcaaattatcaaaaagtcttggcacgcaggcctcat-taaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcat 220  Q
    |||||||| |||| ||||| ||||||||||||||||||  |||||||| | | || ||||||||| | || ||||||||||||||||||  |||||||||    
T  16411032 attcaaatcatcataaagttttggcacgcaggcctcatcaaaacatctta-ataaattcagttaatcatc-ataaatgaacacgtaaaagaatgaagcat 16410935  T
Q  221 gcataacataaacctc 236  Q
    ||||||||||||||||    
T  16410934 gcataacataaacctc 16410919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 20 - 234
Target Start/End: Complemental strand, 17927573 - 17927362
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaatt 119  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||| || ||| ||||||| |||| ||||||    
T  17927573 atcagagtaatcatcaaataacgggatatcacattcttaaaaaccttaaaacatagataaataataatttatcattcatcgacaaaactgcagaggaatt 17927474  T
Q  120 aaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagc 218  Q
    |||||||| | || || ||||||||||||||| |||||||| |||||| ||| |||| ||||||||||| || ||||||||| ||||||||  |||||||    
T  17927473 aaattcaagtcat-aataagtcttggcacgcaagcctcattaaaacat-tca-aaaaattcagttaaacatc-ataaatgaatacgtaaaagaatgaagc 17927378  T
Q  219 atgcataacataaacc 234  Q
    ||||||| ||||||||    
T  17927377 atgcatatcataaacc 17927362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 39 - 234
Target Start/End: Complemental strand, 15612278 - 15612086
Alignment:
Q  39 aacgggatatcacattcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaaattatcaaaaa 138  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||| ||||||| |||||||| |||||||||||| ||| | ||    
T  15612278 aacgggatatcacattcttaaaaaccttaaaacatagataaataataatttatccttcatcgacaaaactgcagcggatttaaattcaaatcatc-ataa 15612180  T
Q  139 gtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcataacataaacc 234  Q
    ||||||||| |||||||||||||||    |||||||| ||||||||||| || ||||||||| ||||||||  |||||||||||||| ||||||||    
T  15612179 gtcttggcatgcaggcctcattaaaacgttcataaaa-ttcagttaaacatc-ataaatgaatacgtaaaagaatgaagcatgcatatcataaacc 15612086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 17 - 234
Target Start/End: Complemental strand, 16862477 - 16862260
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctt-aaatcatagataaataataatttatcctttatcaacaaaacagcagcgg 115  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||| | ||||| ||||| |    
T  16862477 ataatcagagtaatcatcaattaacgggatatcacattcttaaaaatcttcaaaacatagataaataataatttatccttcatcgataaaactgcagcag 16862378  T
Q  116 aattaaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatg 214  Q
    |||||| ||||||| |||| ||| | ||||||||||||||||||| |||||||||| | || |||| |||| | || ||||||||||||||||||  |||    
T  16862377 aattaagttcaaatcatcataaatttttggcacgcaggcctcattaaaacatctca-ataaattcaattaatcatc-ataaatgaacacgtaaaagaatg 16862280  T
Q  215 aagcatgcataacataaacc 234  Q
    ||||||| ||| ||||||||    
T  16862279 aagcatgtatatcataaacc 16862260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 173
Target Start/End: Original strand, 22819468 - 22819625
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctt-aaatcatagataaataataatttatcctttatcaacaaaacagcagcgg 115  Q
    ||||||||||||| || |||  |||||||||||| |||||| |||||||| ||| ||||||||||||||||||||||||| |||||| ||| ||||||||    
T  22819468 ataatcagagtaaacaacaattaacgggatatcatattctt-aaaatcttcaaaacatagataaataataatttatccttcatcaaccaaatagcagcgg 22819566  T
Q  116 aattaaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataa 173  Q
    || ||||||| ||| |||| ||||||||||||||||||||||||| |||||||||||||    
T  22819567 aaataaattctaatcatcataaagtcttggcacgcaggcctcattaaaacatctcataa 22819625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 15 - 209
Target Start/End: Complemental strand, 26953630 - 26953436
Alignment:
Q  15 caataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctt-aaatcatagataaataataatttatcctttatcaacaaaacagcagc 113  Q
    |||| |||||||||| || |||  |||||||||||| |||||||||| |||| ||| |||||||||||||||||||||| ||  ||||| ||| ||||||    
T  26953630 caattatcagagtaaacaacaattaacgggatatcatattcttaaaa-tcttcaaaacatagataaataataatttatctttcgtcaaccaaatagcagc 26953532  T
Q  114 ggaattaaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaa 209  Q
    |||| ||||||| ||| |||| ||||||||||||||||||||||||| ||||||||||||||  ||||||  ||  || ||||||||||||||||||    
T  26953531 ggaaataaattctaatcatcataaagtcttggcacgcaggcctcattaaaacatctcataaatattcagtctaatatc-ataaatgaacacgtaaaa 26953436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 39 - 159
Target Start/End: Complemental strand, 18880083 - 18879966
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaa-attatcaaa 136  Q
    |||||||||||||| ||||||||||||||||||   |||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| || || |||    
T  18880083 aacgggatatcacacttcttaaaaatcttaaat---agataaataataatttatccttcatcaacaaaatagcagcagaatt-aattcaacatcat-aaa 18879989  T
Q  137 aagtcttggcacgcaggcctcat 159  Q
    |||||||||||||||| ||||||    
T  18879988 aagtcttggcacgcagacctcat 18879966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 39 - 187
Target Start/End: Original strand, 17140176 - 17140320
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaa-attatcaaa 136  Q
    ||||||||||| || ||||||||||||||||||   |||||||| ||||| ||||||| |||||||||| ||||||| |||||| ||||| || || |||    
T  17140176 aacgggatatctcacttcttaaaaatcttaaat---agataaattataatctatccttcatcaacaaaatagcagcgaaattaa-ttcaacatcat-aaa 17140270  T
Q  137 aagtcttggcacgcaggcctcattaaa-catctcataaaagttcagttaaac 187  Q
    ||||||||||||||||||||||| |||  ||||||||||  |||||||||||    
T  17140271 aagtcttggcacgcaggcctcatcaaattatctcataaa--ttcagttaaac 17140320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 157
Target Start/End: Original strand, 21248642 - 21248756
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaaattatcaaaa 137  Q
    |||||||||||||| ||||||||||||| |||  |||||||||||||||||||||||   |||||| || |||||||||||||| ||||| ||   |||     
T  21248642 aacgggatatcacacttcttaaaaatctcaaa--atagataaataataatttatcct---tcaacataaaagcagcggaattaacttcaacttcataaat 21248736  T
Q  138 agtcttggcacgcaggcctc 157  Q
     |||||||||||||||||||    
T  21248737 tgtcttggcacgcaggcctc 21248756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 20 - 174
Target Start/End: Original strand, 31970544 - 31970696
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaat 118  Q
    |||||||||| || || | |||||||||||||| ||||||||| ||| ||||   |||||||||| ||||||||||| |||||||||| ||||||||| |    
T  31970544 atcagagtaaacaacatataacgggatatcacacttcttaaaa-tctcaaat---agataaataacaatttatccttcatcaacaaaatagcagcggagt 31970639  T
Q  119 taaattcaaattatcaaaaagtcttggcacgcaggcctcattaaa--catctcataaa 174  Q
    ||| |||||  |   ||| |||||||||||||||||||||| |||  |||||||||||    
T  31970640 taa-ttcaacgtcataaatagtcttggcacgcaggcctcataaaagtcatctcataaa 31970696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 174
Target Start/End: Complemental strand, 5867080 - 5866980
Alignment:
Q  72 atagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaaattatcaaaaagtcttggcacgcaggcctcattaaa--catctc 169  Q
    ||||||||||||||||||||||||   ||||| || |||||||||||||||||||| ||   ||| |||||||||||||||||||||| |||  ||||||    
T  5867080 atagataaataataatttatcctt---caacataa-agcagcggaattaaattcaacttcataaatagtcttggcacgcaggcctcataaaagtcatctc 5866985  T
Q  170 ataaa 174  Q
    |||||    
T  5866984 ataaa 5866980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 39 - 157
Target Start/End: Original strand, 20535472 - 20535588
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaa-attatcaaa 136  Q
    |||||||||||||| ||||||||||||||||| ||  ||||| |||  | |||||||| ||||||| || |||||||||||||| ||||| || || |||    
T  20535472 aacgggatatcacacttcttaaaaatcttaaaaca--gataattaactaattatccttcatcaacataatagcagcggaattaa-ttcaacatcat-aaa 20535567  T
Q  137 aagtcttggcacgcaggcctc 157  Q
    |||||||||||||||||||||    
T  20535568 aagtcttggcacgcaggcctc 20535588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 21396838 - 21396783
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaat-catagataaataataatttatc 92  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||||||||||    
T  21396838 aacgggatatcacacttcttaaaaatcttaaaaacatagataaataataatttatc 21396783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 21791331 - 21791276
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaat-catagataaataataatttatc 92  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||||||||||    
T  21791331 aacgggatatcacacttcttaaaaatcttaaaaacatagataaataataatttatc 21791276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 40398181 - 40398247
Alignment:
Q  108 agcagcggaattaaattcaa-attatcaaaaagtcttggcacgcaggcctcattaaacatctcataaa 174  Q
    |||||||||||||||||||| || || |||||||||||||| ||||||||||| ||||| ||||||||    
T  40398181 agcagcggaattaaattcaacatcat-aaaaagtcttggcatgcaggcctcatcaaacacctcataaa 40398247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 21254468 - 21254523
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    |||||||||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  21254468 aacgggatatcacacttcttaaaaatctcaaa--atagataaataataatttatcctt 21254523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 21285372 - 21285418
Alignment:
Q  137 aagtcttggcacgcaggcctcattaaacatctcataaaagttcagtt 183  Q
    ||||||||||||||||||||||| ||||||||||||||  |||||||    
T  21285372 aagtcttggcacgcaggcctcatcaaacatctcataaatattcagtt 21285418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 175
Target Start/End: Complemental strand, 5610925 - 5610884
Alignment:
Q  134 aaaaagtcttggcacgcaggcctcattaaacatctcataaaa 175  Q
    |||||||||||||||| ||||||||| |||||||||||||||    
T  5610925 aaaaagtcttggcacgtaggcctcatcaaacatctcataaaa 5610884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 173
Target Start/End: Complemental strand, 21919740 - 21919676
Alignment:
Q  108 agcagcggaattaaattcaaattatcaaaaagtcttggcacgcaggcctcattaaacatctcataa 173  Q
    ||||||||| |||||||||| ||   ||| |||||||||||||||||||||| |||||||||||||    
T  21919740 agcagcgga-ttaaattcaacttcataaatagtcttggcacgcaggcctcataaaacatctcataa 21919676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 20493582 - 20493629
Alignment:
Q  137 aagtcttggcacgcaggcctcattaaacatctcataaaagttcagttaa 185  Q
    ||||||||||||| ||||||||| ||||||||||||||| |||||||||    
T  20493582 aagtcttggcacgaaggcctcataaaacatctcataaaa-ttcagttaa 20493629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 23647868 - 23647922
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    |||||||||||||| || |||||||||||||||   ||||||||||||||||||||||    
T  23647868 aacgggatatcacactttttaaaaatcttaaat---agataaataataatttatcctt 23647922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 7372006 - 7372078
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    |||||||||| || || | |||||||||||||| ||||||||| ||||||||   ||||||||||||||||||||||    
T  7372006 atcagagtaaacaacatataacgggatatcacacttcttaaaa-tcttaaat---agataaataataatttatcctt 7372078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 12277868 - 12277835
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  12277868 atcagagtaaacatcaaacaacgggatatcacat 12277835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 29532255 - 29532222
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  29532255 atcagagtaaacatcaaacaacgggatatcacat 29532222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 39095801 - 39095761
Alignment:
Q  15 caataatcagagtaatcatcaaacaacgggatatcacattc 55  Q
    |||| |||||||||||||||||  |||||||||||||||||    
T  39095801 caattatcagagtaatcatcaattaacgggatatcacattc 39095761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 45131885 - 45131809
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    ||||||||||||| || || | |||||||||||||| ||||||||| ||| |||  |||||||||| |||||||||||||    
T  45131885 ataatcagagtaaacaacatataacgggatatcacacttcttaaaa-tctcaaa--atagataaatcataatttatcctt 45131809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 141; Significance: 5e-74; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 17 - 234
Target Start/End: Complemental strand, 22409164 - 22408944
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctta-aatcatagataaataataatttatcctttatcaacaaaacagcagcgg 115  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||| | || ||||||||||||||||||||||||| |||||| ||| ||||||||    
T  22409164 ataatcagagtaatcatcaattaacgggatatcacattcttaaaaatctcagaaacatagataaataataatttatccttcatcaaccaaatagcagcgg 22409065  T
Q  116 aattaaattcaaatt-atcaaaaagtcttggcacgcaggcctcattaaa-catctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagat 213  Q
    ||||||||||||| | |||| |||||||||||||||||||||||||||| || ||||||||| || ||||||||||||||||||||||||||||||  ||    
T  22409064 aattaaattcaaaatcatcataaagtcttggcacgcaggcctcattaaaacacctcataaaattttagttaaacttcaataaatgaacacgtaaaagaat 22408965  T
Q  214 gaagcatgcataacataaacc 234  Q
    |||||||||||||||||||||    
T  22408964 gaagcatgcataacataaacc 22408944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 17 - 236
Target Start/End: Original strand, 18179740 - 18179960
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctt-aaatcatagataaataataatttatcctttatcaacaaaacagcagcgg 115  Q
    ||||||||||||| || |||  |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| || ||| ||| ||||||||    
T  18179740 ataatcagagtaaacagcaattaacgggatatcacattcttaaaaatcttcaaaacatagataaataataatttatccttcattaaccaaatagcagcgg 18179839  T
Q  116 aattaaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatg 214  Q
    ||| |||||||||| |||| ||||||||||||||||||||||||| |||||| |||||| | |||||| |||  || ||||||||||||||||||  |||    
T  18179840 aataaaattcaaatcatcataaagtcttggcacgcaggcctcattaaaacatgtcataataattcagtcaaatatc-ataaatgaacacgtaaaagaatg 18179938  T
Q  215 aagcatgcataacataaacctc 236  Q
    ||||||| ||| ||||||||||    
T  18179939 aagcatgtatatcataaacctc 18179960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 17 - 159
Target Start/End: Complemental strand, 31165725 - 31165579
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaatcatagataaata----ataatttatcctttatcaacaaaacagcag 112  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    |||||||||| || ||||||||||||||||    
T  31165725 ataatcagagtaatcatcaaataacgggatatcacattcttaaaaatcttaaatcataggtaaatatataataatttatctttcatcaacaaaacagcag 31165626  T
Q  113 cggaattaaattcaaattatcaaaaagtcttggcacgcaggcctcat 159  Q
    ||||||||||||||||| |||| ||||||||||||||||| ||||||    
T  31165625 cggaattaaattcaaatcatcataaagtcttggcacgcagacctcat 31165579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 39 - 234
Target Start/End: Original strand, 21765964 - 21766160
Alignment:
Q  39 aacgggatatcacattcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaaattatcaaaaa 138  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||  |||| |||    
T  21765964 aacgggatataacattcttaaaaatcttaaaacatagataaataataatttatccttcatcgacaaaactgcagcggaattaaattcaaa-aatcataaa 21766062  T
Q  139 --gtcttggcacgcaggcctcatta-aacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcataacataaacc 234  Q
       |||||||||| ||||| ||| | || |||||| | || ||||||| ||| || ||||||||||||||||||  |||||||||||||| ||||||||    
T  21766063 ttatcttggcacgtaggccccatcataatatctcaaataaattcagttcaacatc-ataaatgaacacgtaaaagaatgaagcatgcatatcataaacc 21766160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 15 - 228
Target Start/End: Complemental strand, 22603982 - 22603769
Alignment:
Q  15 caataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctt-aaatcatagataaataataatttatcctttatcaacaaaacagcagc 113  Q
    |||| |||||||||| || |||  ||||||||||||||||||||||| |||| ||| |||||||||||||||||||||| ||  || || ||| ||||||    
T  22603982 caattatcagagtaaacaacaattaacgggatatcacattcttaaaa-tcttcaaaacatagataaataataatttatctttcgtcgaccaaatagcagc 22603884  T
Q  114 ggaattaaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaaga 212  Q
    |||| ||||||| ||| |||| ||||||||||||||||||||||||| ||||||||||||||  ||||||  ||  || ||||||||||||||||||  |    
T  22603883 ggaaataaattctaatcatcataaagtcttggcacgcaggcctcattaaaacatctcataaatattcagtctaatatc-ataaatgaacacgtaaaagaa 22603785  T
Q  213 tgaagcatgcataaca 228  Q
    ||| ||||||||||||    
T  22603784 tgaggcatgcataaca 22603769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 39 - 234
Target Start/End: Complemental strand, 21831281 - 21831085
Alignment:
Q  39 aacgggatatcacattcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaaattatcaaaaa 138  Q
    |||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||  |||| |||    
T  21831281 aacgagatatcgcattcttaaaaatcttaaaacatagataaataataatttatccttcatcgacaaaactgcagcggaattaaattcaaa-aatcataaa 21831183  T
Q  139 --gtcttggcacgcaggcctcatta-aacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcataacataaacc 234  Q
       |||||||||| ||||| ||| | || |||||| | || ||||||| ||| || ||||||||||||||||||  |||||||||||||| ||||||||    
T  21831182 ttatcttggcacgtaggccccatcataatatctcaaataaattcagttcaacatc-ataaatgaacacgtaaaagaatgaagcatgcatatcataaacc 21831085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 159
Target Start/End: Original strand, 1560556 - 1560673
Alignment:
Q  39 aacgggatatcacatt-cttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaaattatcaaaa 137  Q
    |||||||||| ||||| ||||||||||||||||   |||||||||||||||||||||| |||||||||| |||||| || |||| |  | || || ||||    
T  1560556 aacgggatataacattacttaaaaatcttaaat---agataaataataatttatccttcatcaacaaaatagcagcagatttaattctacatcat-aaaa 1560651  T
Q  138 agtcttggcacgcaggcctcat 159  Q
    ||||||||||||||||||||||    
T  1560652 agtcttggcacgcaggcctcat 1560673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 126 - 234
Target Start/End: Complemental strand, 16524148 - 16524041
Alignment:
Q  126 aaattatcaaaaagtcttggcacgcaggcctcattaaa-catctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcat 224  Q
    ||||||| |||  |||||||||||||||||| || ||| |||||||||||| ||||||||||| ||| |||||||||||||||||  |||||||||||||    
T  16524148 aaattataaaatggtcttggcacgcaggcctaatcaaaacatctcataaaa-ttcagttaaacatca-taaatgaacacgtaaaagaatgaagcatgcat 16524051  T
Q  225 aacataaacc 234  Q
    | ||||||||    
T  16524050 atcataaacc 16524041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 234
Target Start/End: Complemental strand, 18692696 - 18692572
Alignment:
Q  109 gcagcggaattaaattcaaattatcaaaaagtcttggcacgcaggcctcattaaa-catctcataaaagttcagttaaacttcaataaatgaacacgtaa 207  Q
    ||||||||||||  |  ||||||| |||  |||||||||||||||||| || ||| |||||||||||| ||||||||||| ||| |||||||||| ||||    
T  18692696 gcagcggaattatttcaaaattataaaattgtcttggcacgcaggcctaatcaaaacatctcataaaa-ttcagttaaacatca-taaatgaacatgtaa 18692599  T
Q  208 aaagatgaagcatgcataacataaacc 234  Q
    ||  |||||||||||||| ||||||||    
T  18692598 aagaatgaagcatgcatatcataaacc 18692572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 20593128 - 20593197
Alignment:
Q  108 agcagcggaattaaattcaa-attatcaaaaagtcttggcacgcaggcctcattaaa--catctcataaa 174  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||  |||||||||||    
T  20593128 agcagcggaattaaattcaacattataaaaaagtcttggcacgcaggcctcataaaaaccatctcataaa 20593197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 72 - 159
Target Start/End: Original strand, 19398896 - 19398982
Alignment:
Q  72 atagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaaattatcaaaaagtcttggcacgcaggcctcat 159  Q
    |||||||||||||| ||||||||| |||||||||| || ||||||||||| |||||  |   ||| ||||||||||||||||||||||    
T  19398896 atagataaataatagtttatccttcatcaacaaaatagtagcggaattaa-ttcaacgtcataaatagtcttggcacgcaggcctcat 19398982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 17803499 - 17803571
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctt-aaatcatagataaataataattt 89  Q
    ||||||||||||| || |||  ||||||||||||||||||| |||||||| ||| |||||||||||||||||||    
T  17803499 ataatcagagtaaacaacaattaacgggatatcacattctt-aaaatcttcaaaacatagataaataataattt 17803571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 223
Target Start/End: Original strand, 17803580 - 17803672
Alignment:
Q  131 atcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgca 223  Q
    |||| ||||||||||||||||||||||||| ||||||||||||| | ||||||  ||  || ||||||||||||||||||  |||| |||||||    
T  17803580 atcataaagtcttggcacgcaggcctcattaaaacatctcataataattcagtctaatatc-ataaatgaacacgtaaaagaatgaggcatgca 17803672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 187
Target Start/End: Complemental strand, 28497283 - 28497194
Alignment:
Q  97 atcaacaaaacagcagcggaattaaattcaaattatcaaaaagtcttggcacgcaggcctcat-taaacatctcataaaagttcagttaaac 187  Q
    ||||||| || ||||||||||||||||||||  |   ||||||||||||||||||||||||||  ||||||||| |  ||||||||||||||    
T  28497283 atcaacataatagcagcggaattaaattcaacgtcataaaaagtcttggcacgcaggcctcatcaaaacatctctt--aagttcagttaaac 28497194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 97 - 187
Target Start/End: Complemental strand, 29809694 - 29809605
Alignment:
Q  97 atcaacaaaacagcagcggaattaaattcaaattatcaaaaagtcttggcacgcaggcctcat-taaacatctcataaaagttcagttaaac 187  Q
    ||||||| || ||||||||||||||||||||  |   ||||||||||||||||||||||||||  ||||||||| |  ||||||||||||||    
T  29809694 atcaacataatagcagcggaattaaattcaacgtcataaaaagtcttggcacgcaggcctcatcaaaacatctctt--aagttcagttaaac 29809605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 159
Target Start/End: Original strand, 35244911 - 35244962
Alignment:
Q  108 agcagcggaattaaattcaaattatcaaaaagtcttggcacgcaggcctcat 159  Q
    |||||||||||||||||||||||   ||| ||||||||||||||||||||||    
T  35244911 agcagcggaattaaattcaaattcataaatagtcttggcacgcaggcctcat 35244962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 25957770 - 25957732
Alignment:
Q  137 aagtcttggcacgcaggcctcattaaacatctcataaaa 175  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  25957770 aagtcttggcacgcaggcctcatcaaacatctcataaaa 25957732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 25965817 - 25965779
Alignment:
Q  137 aagtcttggcacgcaggcctcattaaacatctcataaaa 175  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  25965817 aagtcttggcacgcaggcctcatcaaacatctcataaaa 25965779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 16921514 - 16921438
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcct 94  Q
    ||||||||||||| || || | |||||||||||||| ||||||||| ||| |||  |||||||||||||||||||||||    
T  16921514 ataatcagagtaaacaacatataacgggatatcacacttcttaaaa-tctcaaaa-atagataaataataatttatcct 16921438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 23018726 - 23018776
Alignment:
Q  137 aagtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaac 187  Q
    ||||||||||||||||| || || ||||||||||||||  |||||||||||    
T  23018726 aagtcttggcacgcaggacttatcaaacatctcataaatattcagttaaac 23018776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 2870945 - 2870912
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  2870945 atcagagtaaacatcaaacaacgggatatcacat 2870912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 30596439 - 30596472
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  30596439 atcagagtaaacatcaaacaacgggatatcacat 30596472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 20908839 - 20908799
Alignment:
Q  15 caataatcagagtaatcatcaaacaacgggatatcacattc 55  Q
    |||| |||||||||||||||||  |||||||||||||||||    
T  20908839 caattatcagagtaatcatcaattaacgggatatcacattc 20908799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 20923287 - 20923247
Alignment:
Q  15 caataatcagagtaatcatcaaacaacgggatatcacattc 55  Q
    |||| |||||||||||||||||  |||||||||||||||||    
T  20923287 caattatcagagtaatcatcaattaacgggatatcacattc 20923247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 175
Target Start/End: Original strand, 29059894 - 29059930
Alignment:
Q  139 gtcttggcacgcaggcctcattaaacatctcataaaa 175  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  29059894 gtcttggcacgcaggcctcatcaaacacctcataaaa 29059930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 173
Target Start/End: Complemental strand, 31156125 - 31156089
Alignment:
Q  137 aagtcttggcacgcaggcctcattaaacatctcataa 173  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  31156125 aagtcttggcacgcaggcctcataaaacatctaataa 31156089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 35244814 - 35244890
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    ||||||||||||| || || | |||||||||||||| |||||||||| || |||  |||||||||| |||||||||||||    
T  35244814 ataatcagagtaaacaacatataacgggatatcacacttcttaaaaa-ctcaaa--atagataaatcataatttatcctt 35244890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 140; Significance: 2e-73; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 17 - 234
Target Start/End: Original strand, 2759378 - 2759596
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctta-aatcatagataaataataatttatcctttatcaacaaaacagcagcgg 115  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||| ||| ||||||||    
T  2759378 ataatcagagtaatcatcaattaacgggatatcacattcttaaaaatcttagaaacatagataaataataatttatccttcatcaaccaaatagcagcgg 2759477  T
Q  116 aattaaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatg 214  Q
    |||||||||||||| |||| |||||||||||||| |||||||||| ||||||||||||||| ||||||||||| || ||||||||||||||||||  |||    
T  2759478 aattaaattcaaatcatcataaagtcttggcacgtaggcctcattaaaacatctcataaaaattcagttaaacatc-ataaatgaacacgtaaaagaatg 2759576  T
Q  215 aagcatgcataacataaacc 234  Q
    ||||||| ||||||||||||    
T  2759577 aagcatgaataacataaacc 2759596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 3271111 - 3271323
Alignment:
Q  19 aatcagagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaat 118  Q
    ||||||||||||||||||  ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| ||| |||||||||||    
T  3271111 aatcagagtaatcatcaattaacaggatatcacattcttaaaaatcttaaa-catagataaataataatttatccttcatcaaccaaatagcagcggaat 3271209  T
Q  119 taaattcaaattatcaaaaagtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagc 218  Q
    ||||||||||| |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||  | ||||||||||||||||||  |||||||    
T  3271210 taaattcaaatcatcataaagtcttggcacgcaggccccattaaacatctcat-aaagttcagttaaacaac-ataaatgaacacgtaaaagaatgaagc 3271307  T
Q  219 atgcataacataaacc 234  Q
    ||||||||||||||||    
T  3271308 atgcataacataaacc 3271323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 223
Target Start/End: Complemental strand, 13636289 - 13636083
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctt-aaatcatagataaataataatttatcctttatcaacaaaacagcagcgg 115  Q
    ||||||||||||| || ||   ||||||||||||||||| ||||| |||| ||| ||||||||||||||||||||||||| |||||| ||| ||||||||    
T  13636289 ataatcagagtaaacaacagttaacgggatatcacattcctaaaa-tcttcaaaacatagataaataataatttatccttcatcaaccaaatagcagcgg 13636191  T
Q  116 aattaaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatg 214  Q
    || ||||||| ||| |||| ||||| ||||||||||||||||||| ||||||||||| ||  ||||||  ||  || ||||||||||||||||||  |||    
T  13636190 aaataaattctaatcatcataaagttttggcacgcaggcctcattaaaacatctcatcaatattcagtctaatatc-ataaatgaacacgtaaaagaatg 13636092  T
Q  215 aagcatgca 223  Q
    |||||||||    
T  13636091 aagcatgca 13636083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 12317428 - 12317536
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaatt 119  Q
    |||||||||| || |||  |||||||||||||||||||||||   | ||| ||||||||||||||||||||||||| ||| ||||||| ||| |||||||    
T  12317428 atcagagtaaacaacaattaacgggatatcacattcttaaaaccttcaaaacatagataaataataatttatccttcatcgacaaaactgcaacggaatt 12317527  T
Q  120 aaattcaaa 128  Q
    |||||||||    
T  12317528 aaattcaaa 12317536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 174
Target Start/End: Complemental strand, 16403308 - 16403156
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaat 118  Q
    |||||||||| || || | |||||||||||||| ||||||||| ||| ||||   |||||||||||||||||||||| |||||||||| |||||||||||    
T  16403308 atcagagtaaacaacatataacgggatatcacacttcttaaaa-tctcaaat---agataaataataatttatccttcatcaacaaaatagcagcggaat 16403213  T
Q  119 taaattcaa-attatcaaaaagtcttggcacgcaggcctcattaaa--catctcataaa 174  Q
    | ||||||| || || ||| |||||||||||||||||||||| |||  |||||||||||    
T  16403212 t-aattcaacatcat-aaatagtcttggcacgcaggcctcataaaagtcatctcataaa 16403156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 159
Target Start/End: Complemental strand, 15755819 - 15755702
Alignment:
Q  39 aacgggatatcacatt-cttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaaattatcaaaa 137  Q
    |||||||||| ||||| ||||||||||||||||   |||||||||||||||||||||| |||||||||| |||||| || |||| |  | || || ||||    
T  15755819 aacgggatataacattacttaaaaatcttaaat---agataaataataatttatccttcatcaacaaaatagcagcagatttaattctacatcat-aaaa 15755724  T
Q  138 agtcttggcacgcaggcctcat 159  Q
    ||||||||||||||||||||||    
T  15755723 agtcttggcacgcaggcctcat 15755702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 159
Target Start/End: Original strand, 9508454 - 9508574
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatc-atagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaa-attatcaa 135  Q
    |||| ||||||||| |||| |||||||||||||  ||| |||| ||||||||||||||| |||||||||| |||||||||||| ||||||| || || ||    
T  9508454 aacgagatatcacacttctcaaaaatcttaaatagataaataa-taataatttatccttcatcaacaaaatagcagcggaatt-aattcaacatcat-aa 9508550  T
Q  136 aaagtcttggcacgcaggcctcat 159  Q
    ||||||||||||||||||||||||    
T  9508551 aaagtcttggcacgcaggcctcat 9508574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 159
Target Start/End: Complemental strand, 28506212 - 28506076
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaat 118  Q
    |||||||||| || || | |||||||||||||| ||||||||| ||| ||||   |||||||||||||||||||||| |||||||||| ||||||||| |    
T  28506212 atcagagtaaacaacatataacgggatatcacacttcttaaaa-tctcaaat---agataaataataatttatccttcatcaacaaaatagcagcggagt 28506117  T
Q  119 taaattcaaa--ttatcaaaaagtcttggcacgcaggcctcat 159  Q
    | ||||||||  | || ||| ||||||||||||||||||||||    
T  28506116 t-aattcaaacgtcat-aaatagtcttggcacgcaggcctcat 28506076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 14125853 - 14125947
Alignment:
Q  139 gtcttggcacgcaggcctcattaaa-catctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcataacataaacc 234  Q
    ||||||||||||| |||| || ||| |||||||||||| ||||||||||| ||| |||||||||||||||||  |||||||||||||| ||||||||    
T  14125853 gtcttggcacgcatgcctaatcaaaacatctcataaaa-ttcagttaaacatca-taaatgaacacgtaaaagaatgaagcatgcatatcataaacc 14125947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 14429249 - 14429343
Alignment:
Q  139 gtcttggcacgcaggcctcattaaa-catctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcataacataaacc 234  Q
    ||||||||||||| |||| || ||| |||||||||||| ||||||||||| ||| |||||||||||||||||  |||||||||||||| ||||||||    
T  14429249 gtcttggcacgcatgcctaatcaaaacatctcataaaa-ttcagttaaacatca-taaatgaacacgtaaaagaatgaagcatgcatatcataaacc 14429343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 159
Target Start/End: Complemental strand, 11996908 - 11996767
Alignment:
Q  15 caataatcagagtaat-catcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcag 112  Q
    |||||||||||||||  |||||   ||| |||||||||| ||||||||||||| |||  |||||||||||||||||||| |||   ||||| || |||||    
T  11996908 caataatcagagtaaaacatcatgaaacaggatatcacacttcttaaaaatctcaaa--atagataaataataatttatactt---caacataaaagcag 11996814  T
Q  113 cggaattaaattcaaattatcaaaaagtcttggcacgcaggcctcat 159  Q
    ||||||||||||||| ||   |||  ||||||||| |||||||||||    
T  11996813 cggaattaaattcaacttcataaattgtcttggcatgcaggcctcat 11996767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 16055653 - 16055703
Alignment:
Q  137 aagtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaac 187  Q
    ||||||||||||||||||||||| ||||||| ||||||  |||||||||||    
T  16055653 aagtcttggcacgcaggcctcatcaaacatcacataaatattcagttaaac 16055703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 22072325 - 22072375
Alignment:
Q  137 aagtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaac 187  Q
    |||||||||||||||| |||||| ||||||||||||||  |||||||||||    
T  22072325 aagtcttggcacgcagacctcatcaaacatctcataaatattcagttaaac 22072375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 47831117 - 47831167
Alignment:
Q  137 aagtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaac 187  Q
    ||||||||||||||||||||||| |||||||||||||   |||||||||||    
T  47831117 aagtcttggcacgcaggcctcatcaaacatctcataattattcagttaaac 47831167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 174
Target Start/End: Complemental strand, 16220524 - 16220487
Alignment:
Q  137 aagtcttggcacgcaggcctcattaaacatctcataaa 174  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  16220524 aagtcttggcacgcaggcctcatcaaacatctcataaa 16220487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 159
Target Start/End: Original strand, 12698137 - 12698207
Alignment:
Q  88 ttatcctttatcaacaaaacagcagcggaattaaattcaa-attatcaaaaagtcttggcacgcaggcctcat 159  Q
    |||||||| ||||||| || |||||||||||||| ||||| || || ||||||||||||||||||||||||||    
T  12698137 ttatccttcatcaacataatagcagcggaattaa-ttcaacatcat-aaaaagtcttggcacgcaggcctcat 12698207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 27848671 - 27848595
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcct 94  Q
    ||||||||||||| || || | |||||||||||||| ||||||||| ||| |||  |||||||||||||||||||||||    
T  27848671 ataatcagagtaaacaacatataacgggatatcacacttcttaaaa-tctcaaaa-atagataaataataatttatcct 27848595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 11365407 - 11365440
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  11365407 atcagagtaaacatcaaacaacgggatatcacat 11365440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 11857218 - 11857185
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  11857218 atcagagtaaacatcaaacaacgggatatcacat 11857185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 13683672 - 13683705
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  13683672 atcagagtaaacatcaaacaacgggatatcacat 13683705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 13690303 - 13690336
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  13690303 atcagagtaaacatcaaacaacgggatatcacat 13690336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 17053294 - 17053327
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  17053294 atcagagtaaacatcaaacaacgggatatcacat 17053327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 18165566 - 18165533
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  18165566 atcagagtaaacatcaaacaacgggatatcacat 18165533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1108 (Bit Score: 138; Significance: 3e-72; HSPs: 1)
Name: scaffold1108
Description:

Target: scaffold1108; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 2605 - 2821
Alignment:
Q  19 aatcagagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaat-catagataaataataatttatcctttatcaacaaaacagcagcggaa 117  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||| ||| ||||||||||    
T  2605 aatcaaagtaatcatcaattaacgggatatcacattcttaaaaatcttaaaaacatagataaataataatttatccttcatcaaccaaatagcagcggaa 2704  T
Q  118 ttaaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaa 216  Q
    |||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||| | || ||||||||||||||||||  |||||    
T  2705 ttaaattcaaatcatcataaagtcttggcacgcaggcctcattcaaacatctcataaaatttcagttaatcatc-ataaatgaacacgtaaaagaatgaa 2803  T
Q  217 gcatgcataacataaacc 234  Q
    ||||||||||||||||||    
T  2804 gcatgcataacataaacc 2821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 136; Significance: 4e-71; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 21 - 234
Target Start/End: Complemental strand, 34725 - 34512
Alignment:
Q  21 tcagagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaat-catagataaataataatttatcctttatcaacaaaacagcagcggaatt 119  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||| ||| ||||||||||||    
T  34725 tcagagtaatcatcaattaacgggatatcacattcttaaaaatcttaaaaacatagataaataataatttatccttcatcaaccaaatagcagcggaatt 34626  T
Q  120 aaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagc 218  Q
    |||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||| || |||||||| || ||||||||||||||||||  |||||||    
T  34625 aaattcaaatcatcataaagtcttggcacgcaggcctcattaaaacatctcataaaa-ttaagttaaacatc-ataaatgaacacgtaaaagaatgaagc 34528  T
Q  219 atgcataacataaacc 234  Q
    ||||||||||||||||    
T  34527 atgcataacataaacc 34512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 79167 - 79070
Alignment:
Q  136 aaagtcttggcacgcaggcctcattaaa-catctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcataacataaacc 234  Q
    ||||||||||||||||||||| || ||| |||||||||||| |||||||||   ||| |||||||||||||||||  |||||||||||||||||||||||    
T  79167 aaagtcttggcacgcaggcctaatcaaaacatctcataaaa-ttcagttaattatca-taaatgaacacgtaaaagaatgaagcatgcataacataaacc 79070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 84754 - 84699
Alignment:
Q  108 agcagcggaattaaattcaaattatcaaaaagtcttggcacgcaggcctcattaaa 163  Q
    |||||||||||||||||||| || | |||  |||||||||||||||||||||||||    
T  84754 agcagcggaattaaattcaacttcttaaattgtcttggcacgcaggcctcattaaa 84699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 17 - 234
Target Start/End: Complemental strand, 17348 - 17129
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctta-aatcatagataaataataatttatcctttatcaacaaaacagcagcgg 115  Q
    |||||||||| || || |||  ||||||||||||||||||||||||||| | || ||||||||||||||||||||||||| |||||| ||| ||||||||    
T  17348 ataatcagaggaaacaacaattaacgggatatcacattcttaaaaatctcataaacatagataaataataatttatccttcatcaaccaaagagcagcgg 17249  T
Q  116 aattaaattcaaattatcaaaaagtcttggcacgcaggcctcattaa-acatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatg 214  Q
    || ||||||||||| |||| ||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||  |||    
T  17248 aaataaattcaaatcatcataaagtcttggcacgcaggcctcattaagacatctcgtaaaaattcagttaaacttcaataaatgaacacgtaaaagaatg 17149  T
Q  215 aagcatgcataacataaacc 234  Q
    ||||||||||| ||||||||    
T  17148 aagcatgcatatcataaacc 17129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 132; Significance: 1e-68; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 20 - 234
Target Start/End: Complemental strand, 3473809 - 3473596
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaatt 119  Q
    |||||||||||||||||| |||||||||||||||||||||||| |||||| |||| |||||||||||||||||||| ||| ||||||| |||||||||||    
T  3473809 atcagagtaatcatcaaataacgggatatcacattcttaaaaaccttaaaacataaataaataataatttatccttcatcgacaaaactgcagcggaatt 3473710  T
Q  120 aaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagc 218  Q
    |||||||||| || ||||||||||||||||||||||||||| ||||||||||||||| | ||||||  | || ||||||||||||||||||  |||||||    
T  3473709 aaattcaaatcattaaaaagtcttggcacgcaggcctcattaaaacatctcataaaa-tccagttagtcatc-ataaatgaacacgtaaaagaatgaagc 3473612  T
Q  219 atgcataacataaacc 234  Q
    ||||||||||||||||    
T  3473611 atgcataacataaacc 3473596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 17 - 234
Target Start/End: Complemental strand, 17679457 - 17679240
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctt-aaatcatagataaataataatttatcctttatcaacaaaacagcagcgg 115  Q
    ||||||||||||| || |||  |||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||| ||| || |||||    
T  17679457 ataatcagagtaa-caacaattaacgggatatcacattcttaaaaatcttcaaaacatagataaataataatttatccttcatcaaccaaatagtagcgg 17679359  T
Q  116 aattaaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatg 214  Q
    ||| |||||||||| |||| ||||||||||||||||||||||||| ||||||||||||| | |||||| |||  ||  || |||||| ||||||   |||    
T  17679358 aataaaattcaaatcatcataaagtcttggcacgcaggcctcattaaaacatctcataataattcagtcaaatatc-ttagatgaacgcgtaaaggaatg 17679260  T
Q  215 aagcatgcataacataaacc 234  Q
    ||||||||||||||||||||    
T  17679259 aagcatgcataacataaacc 17679240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 17 - 128
Target Start/End: Complemental strand, 3707880 - 3707769
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctt-aaatcatagataaataataatttatcctttatcaacaaaacagcagcgg 115  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||| ||| ||||||||||||| ||||||||||| |||||| ||| ||||||||    
T  3707880 ataatcagagtaatcatcaaataacgggatatcacattcttaaaa-tcttcaaaacatagataaataacaatttatccttcatcaaccaaatagcagcgg 3707782  T
Q  116 aattaaattcaaa 128  Q
    || ||||||||||    
T  3707781 aaataaattcaaa 3707769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 30643689 - 30643806
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctt-aaatcatagataaataataatttatcctttatcaacaaaacagcagcgg 115  Q
    ||||||||||||| || |||  ||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||| |||||| ||| ||||||||    
T  30643689 ataatcagagtaaacaacaattaacgggatatcacattctt-aaaatcttcaaaacatagataaataataatttatccttcatcaaccaaatagcagcgg 30643787  T
Q  116 aattaaattcaaattatca 134  Q
    || ||||||| ||| ||||    
T  30643788 aaataaattctaatcatca 30643806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 174
Target Start/End: Complemental strand, 27240668 - 27240516
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaatt 119  Q
    |||||||||| || || | ||||||||||||||||  | ||||||| |    |||||||||||||||||||||||| |||||||||| ||||||||||||    
T  27240668 atcagagtaaacaacatataacgggatatcacatttcttaaaatctca----atagataaataataatttatccttcatcaacaaaatagcagcggaatt 27240573  T
Q  120 aaattcaa-attatcaaaaagtcttggcacgcaggcctcattaaa--catctcataaa 174  Q
    ||||| || || || ||| |||||||||||||||||||||| |||  |||||||||||    
T  27240572 aaatttaacatcat-aaatagtcttggcacgcaggcctcataaaagtcatctcataaa 27240516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 159
Target Start/End: Original strand, 22531573 - 22531636
Alignment:
Q  97 atcaacaaaacagcagcggaattaaattcaa-attatcaaaaagtcttggcacgcaggcctcat 159  Q
    ||||||| || |||||||||||||||||||| || || ||||||||||||||||||||||||||    
T  22531573 atcaacataatagcagcggaattaaattcaacatcattaaaaagtcttggcacgcaggcctcat 22531636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 173
Target Start/End: Original strand, 20134428 - 20134570
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatccttta---------tcaacaaaacagcagcggaattaaattcaa- 127  Q
    |||||||||||||| ||||||||||| ||||||   |||||||||||||||||||||| |         |||||  |  ||||||||||||||||||||     
T  20134428 aacgggatatcacacttcttaaaaattttaaat---agataaataataatttatccttcaacataatcttcaacgtattagcagcggaattaaattcaac 20134524  T
Q  128 attatcaaaaagtcttggcacgcaggcctcat-taaacatctcataa 173  Q
    || || ||||||||||||||||||||||||||  |||||||||||||    
T  20134525 atcat-aaaaagtcttggcacgcaggcctcataaaaacatctcataa 20134570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 159
Target Start/End: Complemental strand, 22359575 - 22359457
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaa-attatcaaa 136  Q
    |||||||||||||| ||||||||||||||||| ||  ||||| |||  | |||||||| ||||||| || |||||| ||||||| ||||| || || | |    
T  22359575 aacgggatatcacacttcttaaaaatcttaaaaca--gataattaactaattatccttcatcaacataatagcagcagaattaa-ttcaacatcat-aca 22359480  T
Q  137 aagtcttggcacgcaggcctcat 159  Q
    |||||||||||||||||||||||    
T  22359479 aagtcttggcacgcaggcctcat 22359457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 121
Target Start/End: Complemental strand, 22368114 - 22368033
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaa 121  Q
    |||||||||||||| ||||||||||||||||| ||  ||||| |||  | |||||||| ||||||| || ||||||||||||||    
T  22368114 aacgggatatcacacttcttaaaaatcttaaaaca--gataattaactaattatccttcatcaacataatagcagcggaattaa 22368033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 16081251 - 16081216
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacattc 55  Q
    |||||||||| |||||||||||||||||||||||||    
T  16081251 atcagagtaaacatcaaacaacgggatatcacattc 16081216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 21302411 - 21302357
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    ||||||||||| || ||||||||||||||||||   ||||||||||||||||||||||    
T  21302411 aacgggatatcccacttcttaaaaatcttaaat---agataaataataatttatcctt 21302357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Original strand, 16757970 - 16758015
Alignment:
Q  138 agtcttggcacgcaggcctcattaaacatctcataaaagttcagtta 184  Q
    |||||||||||| ||||||||| ||||||||||||||| ||||||||    
T  16757970 agtcttggcacgtaggcctcatcaaacatctcataaaa-ttcagtta 16758015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 35982999 - 35982949
Alignment:
Q  137 aagtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaac 187  Q
    ||||||||||||||||||||||| ||| |||||||||   |||||||||||    
T  35982999 aagtcttggcacgcaggcctcatcaaatatctcataattattcagttaaac 35982949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 19302283 - 19302250
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  19302283 atcagagtaaacatcaaacaacgggatatcacat 19302250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 20934549 - 20934582
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  20934549 atcagagtaaacatcaaacaacgggatatcacat 20934582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 41479450 - 41479417
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  41479450 atcagagtaaacatcaaacaacgggatatcacat 41479417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 175
Target Start/End: Original strand, 43689858 - 43689899
Alignment:
Q  134 aaaaagtcttggcacgcaggcctcattaaacatctcataaaa 175  Q
    |||||||||||||||  ||||||||| |||||||||||||||    
T  43689858 aaaaagtcttggcacataggcctcatcaaacatctcataaaa 43689899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 159
Target Start/End: Original strand, 34509098 - 34509149
Alignment:
Q  108 agcagcggaattaaattcaa-attatcaaaaagtcttggcacgcaggcctcat 159  Q
    |||||||||||||| ||||| || || ||||||||||||||||||||||||||    
T  34509098 agcagcggaattaagttcaacatcat-aaaaagtcttggcacgcaggcctcat 34509149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 52928759 - 52928710
Alignment:
Q  137 aagtcttggcacgcaggcctcat-taaacatctcataaaagttcagttaaac 187  Q
    |||||||||||||||||||||||  ||||||||||||||  |||||||||||    
T  52928759 aagtcttggcacgcaggcctcatcaaaacatctcataaa--ttcagttaaac 52928710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 1079 - 1291
Alignment:
Q  19 aatcagagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaat 118  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||| ||| ||||||| |||    
T  1079 aatcagagtaatcatcaattaacgggatatcacattcttaaaaatcttaaa-caaagataaataataatttatccttcatcaaccaaatagcagcgaaat 1177  T
Q  119 taaattcaaattatcaaaaagtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagc 218  Q
    ||||||||||| |||| ||||||||||||||||| ||  |||||||||||||| |||||||||||||||  | ||||||||||||||||||  |||||||    
T  1178 taaattcaaatcatcataaagtcttggcacgcagaccctattaaacatctcat-aaagttcagttaaacaac-ataaatgaacacgtaaaagaatgaagc 1275  T
Q  219 atgcataacataaacc 234  Q
    ||||||||||||||||    
T  1276 atgcataacataaacc 1291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 3e-63; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 5339846 - 5339700
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcgga 116  Q
    ||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5339846 ataatcagagtaatcatgaaataacgggatatcacattctgaaaaatcttaaatcatagataaataataatttatcctttaacaacaaaacagcagcgga 5339747  T
Q  117 attaaattcaaattatcaaaaagtcttggcacgcaggcctcattaaa 163  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||    
T  5339746 attaaattcaaatcatcataaagtcttggcacgcaggcctcattaaa 5339700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 39 - 187
Target Start/End: Original strand, 44052096 - 44052240
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaa-attatcaaa 136  Q
    |||||||||||||| ||||||||||||||||||   |||||||||||||||||||||| |||||||||| |||||||||||| ||||||| || || |||    
T  44052096 aacgggatatcacacttcttaaaaatcttaaat---agataaataataatttatccttcatcaacaaaatagcagcggaatt-aattcaacatcat-aaa 44052190  T
Q  137 aagtcttggcacgcaggcctcat-taaacatctcataaaagttcagttaaac 187  Q
    |||||||||||||||||||||||  ||| ||||||||||  |||||||||||    
T  44052191 aagtcttggcacgcaggcctcatcaaaatatctcataaa--ttcagttaaac 44052240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 236
Target Start/End: Complemental strand, 16488848 - 16488749
Alignment:
Q  136 aaagtcttggcacgcaggcctcattaaa-catctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcataacataaacc 234  Q
    |||||| ||||||||||||||||||||| |||||||||||| ||||||||| | ||| |||||||||||||||||  |||||||||||||||||||||||    
T  16488848 aaagtcatggcacgcaggcctcattaaaacatctcataaaa-ttcagttaatcatca-taaatgaacacgtaaaagaatgaagcatgcataacataaacc 16488751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 16357707 - 16357609
Alignment:
Q  136 aaagtcttggcacgcaggcctcattaaa-catctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcataacataaacc 234  Q
    |||||||||||||||| ||||||||||| |||||||||||| ||||||| ||| ||| |||||||||||||||||  |||||||||||||| ||||||||    
T  16357707 aaagtcttggcacgcaagcctcattaaaacatctcataaaaattcagttcaacatca-taaatgaacacgtaaaagaatgaagcatgcatatcataaacc 16357609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 16349419 - 16349321
Alignment:
Q  136 aaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcataacataaacc 234  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||| || ||| || ||||||||||||||||||  |||||||| ||||| ||||||||    
T  16349419 aaagtcttggcacgcaggcctcattaaaacatctcataaaaattcaattcaacatc-ataaatgaacacgtaaaagaatgaagcaagcatatcataaacc 16349321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 159
Target Start/End: Original strand, 12901994 - 12902134
Alignment:
Q  15 caataatcagagtaat-catcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcag 112  Q
    |||||||||||||||  |||||   |||||||||||||| ||||||||||||| ||||   |||||||||||||||||||||   |||||| || |||||    
T  12901994 caataatcagagtaaaacatcatgaaacgggatatcacacttcttaaaaatctcaaat---agataaataataatttatcct---tcaacataatagcag 12902087  T
Q  113 cggaattaaattcaaa--ttatcaaaaagtcttggcacgcaggcctcat 159  Q
    ||||||| ||||||||  | || ||| ||||||||||||||||||||||    
T  12902088 cggaatt-aattcaaacgtcat-aaatagtcttggcacgcaggcctcat 12902134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 16240852 - 16240779
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    |||||||||| || || | |||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||    
T  16240852 atcagagtaaacaacagataacgggatatcacacttcttaaaaatcttaaat---agataaataataatttatcctt 16240779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 52244002 - 52243952
Alignment:
Q  137 aagtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaac 187  Q
    ||||||||||||||||||||||| ||||||||||||||  |||||||||||    
T  52244002 aagtcttggcacgcaggcctcatcaaacatctcataaatattcagttaaac 52243952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 12773425 - 12773472
Alignment:
Q  138 agtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaac 187  Q
    |||||||||||||||||||||| ||||||||||||||  |||||||||||    
T  12773425 agtcttggcacgcaggcctcatcaaacatctcataaa--ttcagttaaac 12773472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 16271085 - 16271012
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    |||||||||| || || | |||| ||||||||| ||||||||||||||||||   ||||||||||||||||||||||    
T  16271085 atcagagtaaacaacagataacgtgatatcacacttcttaaaaatcttaaat---agataaataataatttatcctt 16271012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 17 - 55
Target Start/End: Complemental strand, 16352657 - 16352619
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattc 55  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  16352657 ataatcagagtaatcatcaaataacgggatatcacattc 16352619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 159
Target Start/End: Complemental strand, 14054172 - 14054035
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcgg 115  Q
    ||||||||||||| || || | |||| ||||||||| ||||||||| ||| |||  |||||||||||||||||||||||   |||||| || |||||  |    
T  14054172 ataatcagagtaaacaacatataacgagatatcacacttcttaaaa-tctcaaaa-atagataaataataatttatcct---tcaacataa-agcagtag 14054079  T
Q  116 aattaaattcaaattatcaaaaagtcttggcacgcaggcctcat 159  Q
    |||||||||||| ||   |||  |||||||||||||||||||||    
T  14054078 aattaaattcaacttcataaattgtcttggcacgcaggcctcat 14054035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 7798015 - 7798069
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    |||||||||||||| ||||||||||| ||||||   ||||||||||||||||||||||    
T  7798015 aacgggatatcacacttcttaaaaattttaaat---agataaataataatttatcctt 7798069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 15614338 - 15614392
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    |||| ||||||||| ||||||||||||||||||   ||||||||||||||||||||||    
T  15614338 aacgagatatcacacttcttaaaaatcttaaat---agataaataataatttatcctt 15614392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 17045725 - 17045801
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcct 94  Q
    ||||||||||||| || || | |||||||||||||| ||||||||| ||| |||  |||||||||||||||||||||||    
T  17045725 ataatcagagtaaacaacatataacgggatatcacacttcttaaaa-tctcaaaa-atagataaataataatttatcct 17045801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 3108395 - 3108362
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  3108395 atcagagtaaacatcaaacaacgggatatcacat 3108362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 175
Target Start/End: Original strand, 13843572 - 13843613
Alignment:
Q  134 aaaaagtcttggcacgcaggcctcattaaacatctcataaaa 175  Q
    ||||||| |||||||| ||||||||| |||||||||||||||    
T  13843572 aaaaagttttggcacgtaggcctcatcaaacatctcataaaa 13843613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 16207043 - 16207010
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  16207043 atcagagtaaacatcaaacaacgggatatcacat 16207010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 17963240 - 17963207
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  17963240 atcagagtaaacatcaaacaacgggatatcacat 17963207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 20114700 - 20114733
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  20114700 atcagagtaaacatcaaacaacgggatatcacat 20114733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 23953360 - 23953393
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  23953360 atcagagtaaacatcaaacaacgggatatcacat 23953393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 23960022 - 23960055
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  23960022 atcagagtaaacatcaaacaacgggatatcacat 23960055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 173
Target Start/End: Original strand, 15095856 - 15095892
Alignment:
Q  137 aagtcttggcacgcaggcctcattaaacatctcataa 173  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  15095856 aagtcttggcacgcaggcctcatcaaatatctcataa 15095892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 16375600 - 16375551
Alignment:
Q  137 aagtcttggcacgcaggcctcat-taaacatctcataaaagttcagttaaac 187  Q
    |||||||||||||||||||||||  ||||||||||||||  |||||||||||    
T  16375600 aagtcttggcacgcaggcctcatcaaaacatctcataaa--ttcagttaaac 16375551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 17 - 159
Target Start/End: Complemental strand, 23235 - 23094
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcgga 116  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  23235 ataatcagagtaatcatcaaataacgggatatcacattcttaaaaatcttaaatcatagataaataataatttatcctttatcaac-aaacagcagcaga 23137  T
Q  117 attaaattcaaattatcaaaaagtcttggcacgcaggcctcat 159  Q
    ||||||||||||| |||| ||||||||||||||||||||||||    
T  23136 attaaattcaaatcatcataaagtcttggcacgcaggcctcat 23094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 17 - 163
Target Start/End: Original strand, 32791 - 32936
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcgga 116  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  32791 ataatcagagtaatcatcaaataacgggatatcacattcttaaaaatcttaaatcatagatatataataatttatcctttatcaac-aaacagcagcgga 32889  T
Q  117 attaaattcaaattatcaaaaagtcttggcacgcaggcctcattaaa 163  Q
    ||||||||||||| |||| |||||||||||||| |||||||||||||    
T  32890 attaaattcaaatcatcataaagtcttggcacggaggcctcattaaa 32936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 105; Significance: 1e-52; HSPs: 3)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 19 - 234
Target Start/End: Complemental strand, 32430 - 32212
Alignment:
Q  19 aatcagagtaatcatcaaacaacgggatatcacattcttaa--aaatctt-aaatcatagataaataataatttatcctttatcaacaaaacagcagcgg 115  Q
    ||||||||||| || |||  |||||||||||||||||||||  ||||||| ||| |||||||||||||| |||||||||| |||||| ||| ||||||||    
T  32430 aatcagagtaaacaacaattaacgggatatcacattcttaacaaaatcttcaaaacatagataaataatcatttatccttcatcaaccaaatagcagcgg 32331  T
Q  116 aattaaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatg 214  Q
    |||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||| | ||||||  ||  || ||||||||||||||||||  |||    
T  32330 aattaaattcaaatcatcataaagtcttggcacgcaggcctcattaaaacatctcataataattcagtctaatatc-ataaatgaacacgtaaaagaatg 32232  T
Q  215 aagcatgcataacataaacc 234  Q
    ||||||||||| ||||||||    
T  32231 aagcatgcatatcataaacc 32212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 187
Target Start/End: Original strand, 221628 - 221676
Alignment:
Q  138 agtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaac 187  Q
    |||||||||||| ||||||||| |||| |||||||||| |||||||||||    
T  221628 agtcttggcacgtaggcctcatcaaacgtctcataaaa-ttcagttaaac 221676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 225812 - 225887
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    |||||||||| || || | |||||||||||||| ||||||||||| | |||  |||||||||||| |||||||||||    
T  225812 atcagagtaaacaacatataacgggatatcacacttcttaaaaatttcaaaa-atagataaataacaatttatcctt 225887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 99; Significance: 5e-49; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 122 - 338
Alignment:
Q  19 aatcagagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaat-catagataaataataatttatcctttatcaacaaaacagcagcggaa 117  Q
    ||||||||||||||||||  ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||| |||||| ||| ||||||||||    
T  122 aatcagagtaatcatcaattaacgggatatcacattcttaaaattcttaaaaacatagataaataataatttatccttcatcaaccaaatagcagcggaa 221  T
Q  118 ttaaattc-aaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatga 215  Q
     ||||||| |||| |||| ||||| ||||||| ||||||||||| |||||||||| | || ||||||||| | || ||||||||| || |||||  ||||    
T  222 ataaattcaaaatcatcataaagttttggcacccaggcctcattaaaacatctca-ataaattcagttaatcatc-ataaatgaatacataaaagaatga 319  T
Q  216 agcatgcataacataaacc 234  Q
    |||||||||||||||||||    
T  320 agcatgcataacataaacc 338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 232
Target Start/End: Complemental strand, 67252 - 67037
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctt-aaatcatagataaataataatttatcctttatcaacaaaacagcagcgg 115  Q
    ||||||||||||| || |||  ||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||| |||||| ||| ||||||||    
T  67252 ataatcagagtaaacaacaattaacgggatatcacattcttaaaa-tcttcaaaacatagataaataataatttatccttcatcaaccaaatagcagcgg 67154  T
Q  116 aattaaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatg 214  Q
    || ||||||| ||| |||| ||||||||||||||||||||||||| ||||||||||||| | ||||||  ||  || ||||||||||||||||||  |||    
T  67153 aaataaattctaatcatcataaagtcttggcacgcaggcctcattaaaacatctcataataattcagtctaatatc-ataaatgaacacgtaaaagaatg 67055  T
Q  215 aagcatgcataacataaa 232  Q
    ||||||||| | ||||||    
T  67054 aagcatgcaaatcataaa 67037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 17 - 223
Target Start/End: Complemental strand, 13032 - 12827
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctt-aaatcatagataaataataatttatcctttatcaacaaaacagcagcgg 115  Q
    ||||||||||||| |  |||  ||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||| |||||| ||| ||||||||    
T  13032 ataatcagagtaaacgacaattaacgggatatcacattcttaaaa-tcttcaaaacatagataaataataatttatccttcatcaaccaaatagcagcgg 12934  T
Q  116 aattaaattcaaattatcaaaaagtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatga 215  Q
    || ||||||| ||| |||| ||||| |||||||||||||||||||||||||||||||| | ||||||  ||  || ||||||||||||||||||  ||||    
T  12933 aaataaattctaatcatcataaagtattggcacgcaggcctcattaaacatctcataataattcagtctaatatc-ataaatgaacacgtaaaagaatga 12835  T
Q  216 agcatgca 223  Q
    ||||||||    
T  12834 agcatgca 12827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 15 - 175
Target Start/End: Original strand, 198036 - 198198
Alignment:
Q  15 caataatcagagtaat-catcaaacaacgggatatcacattcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagc 113  Q
    |||||||||||||||  |||||   ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||    
T  198036 caataatcagagtaacacatcatgaaacgggatatcacattcttaaaaatcttaaaacatagataaataataatttatccttcatcaacaaaatagcagc 198135  T
Q  114 ggaattaaattcaaattatca-aaaagtcttggcacgcaggcctcat-taaacatctcataaaa 175  Q
    |||||||||||| ||| |||| |||||||||||||||||||||||||  |||||||||||||||    
T  198136 ggaattaaattc-aatcatcataaaagtcttggcacgcaggcctcatcaaaacatctcataaaa 198198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 223
Target Start/End: Complemental strand, 1294 - 1088
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctt-aaatcatagataaataataatttatcctttatcaacaaaacagcagcgg 115  Q
    ||||||||||||| || |||  ||||||||||||||||||||||| |||| ||| |||||||||||||||||||||| || |||||| ||| ||||||||    
T  1294 ataatcagagtaaacaacaattaacgggatatcacattcttaaaa-tcttcaaaacatagataaataataatttatctttcatcaaccaaatagcagcgg 1196  T
Q  116 aattaaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatg 214  Q
    || ||||||| ||| |||| ||||||||||||||||||||||||| ||||||||||||||  ||||||  ||  || ||||||||||||||||||  |||    
T  1195 aaataaattctaatcatcataaagtcttggcacgcaggcctcattaaaacatctcataaatattcagtctaatatc-ataaatgaacacgtaaaagaatg 1097  T
Q  215 aagcatgca 223  Q
    |||||||||    
T  1096 aagcatgca 1088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 39504 - 39436
Alignment:
Q  108 agcagcggaattaaattcaa-attatcaaaaagtcttggcacgcaggcctcattaaa--catctcataaa 174  Q
    |||||||||||||||||||| || || |||||||||||||||||||||||||| |||  |||||||||||    
T  39504 agcagcggaattaaattcaacatcat-aaaaagtcttggcacgcaggcctcataaaaaccatctcataaa 39436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 228
Target Start/End: Complemental strand, 14628 - 14415
Alignment:
Q  15 caataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcg 114  Q
    |||| |||||||||| || |||  ||||||||||||||||||||||| | | ||| |||||||||||||||||||||| ||  ||||| |||  ||||||    
T  14628 caattatcagagtaaacaacaattaacgggatatcacattcttaaaattttcaaaacatagataaataataatttatctttcgtcaaccaaatggcagcg 14529  T
Q  115 gaattaaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagat 213  Q
    ||| ||||||| ||| ||||  ||||||||||||||||||||| || ||||||||||||||  ||||||  ||  || ||||||||||||||||||  ||    
T  14528 gaaataaattctaatcatcatcaagtcttggcacgcaggcctcgttaaaacatctcataaatattcagtctaatatc-ataaatgaacacgtaaaagaat 14430  T
Q  214 gaagcatgcataaca 228  Q
    |||||||||||||||    
T  14429 gaagcatgcataaca 14415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 15 - 228
Target Start/End: Complemental strand, 26159 - 25947
Alignment:
Q  15 caataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctt-aaatcatagataaataataatttatcctttatcaacaaaacagcagc 113  Q
    |||| |||||||||| || |||  |||||||||||||||||| ||||||||| ||| |||||||||||||||||||||| ||  ||||| ||| ||||||    
T  26159 caattatcagagtaaacaacaattaacgggatatcacattct-aaaaatcttcaaaacatagataaataataatttatctttcgtcaaccaaatagcagc 26061  T
Q  114 ggaattaaattcaaattatcaaaaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaaga 212  Q
    |||| ||||||| ||| |||| || ||||||||| |||||||||||| ||||| ||||||||  ||||||  ||  || ||||||||||||||||||  |    
T  26060 ggaa-taaattctaatcatcataacgtcttggcatgcaggcctcattaaaacaactcataaatattcagtctaatatc-ataaatgaacacgtaaaagaa 25963  T
Q  213 tgaagcatgcataaca 228  Q
    ||||||||||||||||    
T  25962 tgaagcatgcataaca 25947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0346 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 39 - 234
Target Start/End: Original strand, 14386 - 14583
Alignment:
Q  39 aacgggatatcacattcttaaaaatcttaaat-catagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaaa--ttatcaa 135  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||  | || ||    
T  14386 aacgggatatcacattcttaaaaatcttaaaaacatagataaataataatttatccttcatcaaccaaatagcagcggaattaaattcaaaagtcat-aa 14484  T
Q  136 aaagtcttggcacgcaggcctcatta-aacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcataacataaacc 234  Q
    |   |||||||||| ||||| ||| | || |||||| | ||  |||||||||| || ||||||||||||||||||  ||||||||||||||  |||||||    
T  14485 attatcttggcacgtaggccccatcataatatctcaaataaactcagttaaacatc-ataaatgaacacgtaaaagaatgaagcatgcatataataaacc 14583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 17 - 234
Target Start/End: Complemental strand, 17996 - 17776
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatcttaa-atcatagataaataataatttatcctttatcaacaaaacagcagcgg 115  Q
    ||||||||||||| || ||   |||||||||||||||||||||||||||||| | | ||||||||||||||||||||||| |||||| ||| ||||||||    
T  17996 ataatcagagtaaacaacatgtaacgggatatcacattcttaaaaatcttaataacgtagataaataataatttatccttcatcaaccaaatagcagcgg 17897  T
Q  116 aattaaattcaaattatcaaaaa--gtcttggcacgcaggcctcatta-aacatctcata-aaagttcagttaaacttcaataaatgaacacgtaaaaag 211  Q
    ||||||| |||||  |||| |||  ||||||||||| ||||| ||| | || |||||| | ||| ||||||||| | || ||||| ||||||||||||      
T  17896 aattaaactcaaa-aatcataaattgtcttggcacgtaggccccatcataatatctcaaataaaattcagttaaccatc-ataaaggaacacgtaaaaga 17799  T
Q  212 atgaagcatgcataacataaacc 234  Q
    |||||||||||||| ||||||||    
T  17798 atgaagcatgcatatcataaacc 17776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 39 - 187
Target Start/End: Original strand, 19942 - 20086
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaa-attatcaaa 136  Q
    |||||||||||||| ||||||||||||||||||   |||||||||||||||||||||| |||||||||| |||||||||||| ||||||| || || |||    
T  19942 aacgggatatcacacttcttaaaaatcttaaat---agataaataataatttatccttcatcaacaaaatagcagcggaatt-aattcaacatcat-aaa 20036  T
Q  137 aagtcttggcacgcaggcctcattaaa-catctcataaaagttcagttaaac 187  Q
    ||||||||||||||||||||||| |||  ||||||||||  |||||||||||    
T  20037 aagtcttggcacgcaggcctcatcaaagtatctcataaa--ttcagttaaac 20086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 136 - 234
Target Start/End: Original strand, 58030 - 58127
Alignment:
Q  136 aaagtcttggcacgcaggcctcattaaa-catctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcataacataaacc 234  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||| |||||||||||||||||  |||||||||||||||||||||||    
T  58030 aaagtcttggcacgcaggcctcattaaaacatctcataaaa-ttcagttaaacatca-taaatgaacacgtaaaagaatgaagcatgcataacataaacc 58127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 187
Target Start/End: Complemental strand, 6934 - 6790
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaa-attatcaaa 136  Q
    |||||||||||||| ||||||||||||||||||   |||||||||||||||||||||| |||||||||| |||||||||||| ||||||| || || |||    
T  6934 aacgggatatcacacttcttaaaaatcttaaat---agataaataataatttatccttcatcaacaaaatagcagcggaatt-aattcaacatcat-aaa 6840  T
Q  137 aagtcttggcacgcaggcctcat-taaacatctcataaaagttcagttaaac 187  Q
    |||| ||||||||||||||||||  ||| ||||||||||  |||||||||||    
T  6839 aagtattggcacgcaggcctcatcaaaatatctcataaa--ttcagttaaac 6790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 136 - 233
Target Start/End: Original strand, 8872 - 8968
Alignment:
Q  136 aaagtcttggcacgcaggcctcattaaa-catctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcataacataaac 233  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||| |||||||||||||||||  ||||||||||||||||||||||    
T  8872 aaagtcttggcacgcaggcctcattaaaacatctcataaaa-ttcagttaaacatca-taaatgaacacgtaaaagaatgaagcatgcataacataaac 8968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 29535 - 29568
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  29535 atcagagtaaacatcaaacaacgggatatcacat 29568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 42 - 174
Target Start/End: Original strand, 33381 - 33513
Alignment:
Q  42 gggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaaattatcaaaaa-- 138  Q
    ||||||||||| ||||||||||||| |||  |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | ||| |||      
T  33381 gggatatcacacttcttaaaaatctcaaa--atagataaataataatttatccttcatcaacaaaatagcagcggaattaaattcaaact-tcataaatt 33477  T
Q  139 gtcttggcacgcaggcctcattaaacatctcataaa 174  Q
     |||||||||||||||||||| |||||  |||||||    
T  33478 atcttggcacgcaggcctcatcaaacacatcataaa 33513  T

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Target: scaffold0124 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 234
Target Start/End: Original strand, 41981 - 42078
Alignment:
Q  136 aaagtcttggcacgcaggcctcattaaa-catctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcataacataaacc 234  Q
    ||||||||||||||||||| |||||||| |||||||||||| ||||||||||| ||| |||||||||||||||||  |||||||||||||||||||||||    
T  41981 aaagtcttggcacgcaggcgtcattaaaacatctcataaaa-ttcagttaaacatca-taaatgaacacgtaaaagaatgaagcatgcataacataaacc 42078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 136 - 236
Target Start/End: Complemental strand, 2825 - 2726
Alignment:
Q  136 aaagtcttggcacgcaggcctcattaaa-catctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcataacataaacc 234  Q
    |||||||||||||| ||||||||||||| |||||||||||| ||||||||||| ||| |||||||||||||||||  |||||||||||||| ||||||||    
T  2825 aaagtcttggcacggaggcctcattaaaacatctcataaaa-ttcagttaaacatca-taaatgaacacgtaaaagaatgaagcatgcatatcataaacc 2728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 20 - 187
Target Start/End: Complemental strand, 22293 - 22131
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaat 118  Q
    |||||||||| || || | |||||||||||||| ||||||||| ||||||||    ||||||||||||||||||||| |||||||||| |||||||||||    
T  22293 atcagagtaaacaacatataacgggatatcacacttcttaaaa-tcttaaatt---gataaataataatttatccttcatcaacaaaatagcagcggaat 22198  T
Q  119 taaattcaaattatca-aaaagtcttggcacgcaggcctcattaaa--catctcataaaagttcagttaaac 187  Q
    | |||||||   |||| ||||||||||||||||||||||||| |||  |||||||||||  |||||||||||    
T  22197 t-aattcaa--catcacaaaagtcttggcacgcaggcctcataaaagtcatctcataaa--ttcagttaaac 22131  T

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Target: scaffold0412 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 14471 - 14374
Alignment:
Q  136 aaagtcttggcacgcaggcctcattaaa-catctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcataacataaacc 234  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||| ||| ||| |||||||||||||||||  |||||||||||||| ||||||||    
T  14471 aaagtcttggcacgcaggcctcattaaaacatctcataaaa-ttcagttcaacatca-taaatgaacacgtaaaagaatgaagcatgcatatcataaacc 14374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 136 - 234
Target Start/End: Original strand, 23031 - 23129
Alignment:
Q  136 aaagtcttggcacgcaggcctcattaaa-catctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcataacataaacc 234  Q
    |||||||||||||||| ||||||||||| |||||||||||| ||||||| ||| ||| |||||||||||||||||  |||||||||||||| ||||||||    
T  23031 aaagtcttggcacgcaagcctcattaaaacatctcataaaaattcagttcaacatca-taaatgaacacgtaaaagaatgaagcatgcatatcataaacc 23129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 234
Target Start/End: Original strand, 37862 - 37960
Alignment:
Q  136 aaagtcttggcacgcaggcctcatt-aaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcataacataaacc 234  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||| || ||| || ||||||||||||||||||  |||||||| ||||| ||||||||    
T  37862 aaagtcttggcacgcaggcctcattaaaacatctcataaaaattcaattcaacatc-ataaatgaacacgtaaaagaatgaagcaagcatatcataaacc 37960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1459 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold1459
Description:

Target: scaffold1459; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 102 - 1
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctta-aatcatagataaataataatttatcctttatcaacaaaacagcagcgg 115  Q
    ||||||||||||| || |||  |||| |||||||||||||||||||||| | || ||||||||||||||||||||||||| |||||| ||| ||||||||    
T  102 ataatcagagtaaacaacaattaacgtgatatcacattcttaaaaatctcagaaacatagataaataataatttatccttcatcaaccaaatagcagcgg 3  T
Q  116 aa 117  Q
    ||    
T  2 aa 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 39 - 155
Target Start/End: Complemental strand, 618 - 505
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaa-attatcaaa 136  Q
    |||| ||||||||| |||| |||||||||||||   |||||||||||||||||||||| |||||||||| |||||||||||| ||||||| || || |||    
T  618 aacgagatatcacacttctaaaaaatcttaaat---agataaataataatttatccttcatcaacaaaatagcagcggaatt-aattcaatatcat-aaa 524  T
Q  137 aagtcttggcacgcaggcc 155  Q
    |||||||||||||||||||    
T  523 aagtcttggcacgcaggcc 505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 856 - 951
Alignment:
Q  139 gtcttggcacgcaggcctcattaaa-catctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcataacataaacc 234  Q
    |||||||||||||||||| || ||| |||||||||||| ||||||||||| ||| |||||||||||||||||  |||||||||||||| ||||||||    
T  856 gtcttggcacgcaggcctaatcaaaacatctcataaaaattcagttaaacatca-taaatgaacacgtaaaagaatgaagcatgcatatcataaacc 951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 159
Target Start/End: Complemental strand, 12326 - 12189
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaat 118  Q
    |||||||||| || || | |||||||||||||| |||| |||||||| |||  |||||||||||||||||||||||   |||||| || |||||||||||    
T  12326 atcagagtaaacaacatataacgggatatcacacttctaaaaaatctcaaaa-atagataaataataatttatcct---tcaacataaaagcagcggaat 12231  T
Q  119 taaattc-aaattatcaaaaagtcttggcacgcaggcctcat 159  Q
    ||||||| ||| ||  ||| ||||||||||||||||||||||    
T  12230 taaattcgaaagtaataaatagtcttggcacgcaggcctcat 12189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0933 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0933
Description:

Target: scaffold0933; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 4068 - 4138
Alignment:
Q  19 aatcagagtaatcatcaaacaacgggatatcacattcttaaaaatctt-aaatcatagataaataataatt 88  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  4068 aatcagagtaatcatcaattaacgggatatcacattcttaaaaatcttaaaaacatagataaataataatt 4138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 4027 - 3876
Alignment:
Q  19 aatcagagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaat 118  Q
    ||||||||||| || || | ||||||||||||||||  | ||||||| |||  |||||||||| ||||||||||||| ||||  ||    ||||||||||    
T  4027 aatcagagtaaacaacataaaacgggatatcacatttcttaaaatctcaaa--atagataaatcataatttatccttcatcataaa----gcagcggaat 3934  T
Q  119 taaattcaaattatcaaaaagtcttggcacgcaggcctcat--taaacatctcataaa 174  Q
    ||||||||||||   ||| ||||||||||||||||||||||  ||| |||||||||||    
T  3933 taaattcaaattcataaatagtcttggcacgcaggcctcataataatcatctcataaa 3876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 39 - 159
Target Start/End: Complemental strand, 499 - 382
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaa-attatcaaa 136  Q
    |||| ||||||||| |||||||||||||||| |   |||| ||||||||||||||||| |||||||||| |||||||||||| ||||||| || || |||    
T  499 aacgagatatcacacttcttaaaaatcttaatt---agatcaataataatttatccttcatcaacaaaatagcagcggaatt-aattcaacatcat-aaa 405  T
Q  137 aagtcttggcacgcaggcctcat 159  Q
    ||||||||||||||||| |||||    
T  404 aagtcttggcacgcaggtctcat 382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 159
Target Start/End: Complemental strand, 3225 - 3138
Alignment:
Q  72 atagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaa-attatcaaaaagtcttggcacgcaggcctcat 159  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||| || || || ||  ||||||||||||||||||||||    
T  3225 atagataaataataatttatccttcatcaacaaaatagcagcggaattaaatttaacatcat-aagtagtcttggcacgcaggcctcat 3138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 159
Target Start/End: Complemental strand, 24953 - 24837
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaaattatcaaaa 137  Q
    |||||||||||||| ||| ||||||||||||||   |||||||||||||||||||||| |||||||||| || ||||||||| |||||||  | |  |||    
T  24953 aacgggatatcacacttcataaaaatcttaaat---agataaataataatttatccttcatcaacaaaatagaagcggaatt-aattcaacatct-taaa 24859  T
Q  138 agtcttggcacgcaggcctcat 159  Q
    ||||||||||||||| ||||||    
T  24858 agtcttggcacgcagacctcat 24837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 98136 - 98103
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  98136 atcagagtaaacatcaaacaacgggatatcacat 98103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 72 - 174
Target Start/End: Original strand, 12792 - 12896
Alignment:
Q  72 atagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaaa-ttatcaaaaagtcttggcacgcaggcctcattaaa--catct 168  Q
    |||||||||||||||||||||||| |||||||||| ||||||||| || ||||||||  ||  ||| |||||||||||||||||||||| |||  |||||    
T  12792 atagataaataataatttatccttcatcaacaaaatagcagcggagtt-aattcaaacgtaataaatagtcttggcacgcaggcctcataaaagtcatct 12890  T
Q  169 cataaa 174  Q
    ||||||    
T  12891 cataaa 12896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 15 - 174
Target Start/End: Complemental strand, 26511 - 26355
Alignment:
Q  15 caataatcagagtaat-catcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcag 112  Q
    |||||||||||||||  |||||   |||||||||||||| || |||||||| | |||  ||||||||||||| ||||||||||   ||||| || |||||    
T  26511 caataatcagagtaaaacatcatgaaacgggatatcacactttttaaaaatatcaaa--atagataaataatgatttatcctt---caacataaaagcag 26417  T
Q  113 cggaattaaattcaaattatcaaaaagtcttggcacgcaggcctcattaaacatctcataaa 174  Q
    ||||||||||||||| ||   |||  |||||||||||||||||||||  ||||| |||||||    
T  26416 cggaattaaattcaacttcataaattgtcttggcacgcaggcctcatctaacatgtcataaa 26355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 174
Target Start/End: Complemental strand, 16362 - 16195
Alignment:
Q  15 caataatcagagtaat-catcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatccttta--------tcaacaa 104  Q
    |||||||||||||||  |||||   |||||||||||||| ||||||||||| | |||  ||||||| ||||||||||||| || |        ||||||     
T  16362 caataatcagagtaaaacatcatgaaacgggatatcacacttcttaaaaatatcaaa--atagatatataataatttatcgttcaacataacttcaacat 16265  T
Q  105 aacagcagcggaattaaattcaaattatcaaaaagtcttggcacgcaggcctcattaaacatctcataaa 174  Q
    || |||||||||||||||||||| ||   |||  |||||||||||||||||| || |||||| |||||||    
T  16264 aaaagcagcggaattaaattcaacttcataaattgtcttggcacgcaggcctaatcaaacatgtcataaa 16195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 123 - 223
Target Start/End: Complemental strand, 289 - 190
Alignment:
Q  123 ttcaaattatcaaaaagtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgc 222  Q
    ||||||| |||| ||||||||||||||||||||| |||||||||||||||| | ||||||  ||  || |||||||||| |||||||  |||||||||||    
T  289 ttcaaatcatcataaagtcttggcacgcaggccttattaaacatctcataataattcagtctaatatc-ataaatgaactcgtaaaagaatgaagcatgc 191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 413 - 460
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatc 64  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  413 ataatcagagtaatcatcaaataacgggatatcacattcttaaaaatc 460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 45200 - 45247
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcacattcttaaaaatc 64  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  45200 ataatcagagtaatcatcaaataacgggatatcacattcttaaaaatc 45247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 39 - 121
Target Start/End: Original strand, 12480 - 12559
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaa 121  Q
    |||||||||||||| |||||||||| |||||||   ||||||||||||||||| |||| |||||||||| ||||||||||||||    
T  12480 aacgggatatcacacttcttaaaaa-cttaaat---agataaataataatttacccttcatcaacaaaatagcagcggaattaa 12559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 39 - 187
Target Start/End: Complemental strand, 411972 - 411827
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaa-attatcaaa 136  Q
    |||||||||||||| ||||||||||||||||| ||  ||||| |||  | |||||||| ||||||| || |||||||||||||| ||||| || || |||    
T  411972 aacgggatatcacacttcttaaaaatcttaaaaca--gataattaactaattatccttcatcaacataatagcagcggaattaa-ttcaacatcat-aaa 411877  T
Q  137 aagtcttggcacgcaggcctcat-taaacatctcataaaagttcagttaaac 187  Q
    |||||||| ||||||||||||||  ||| ||||||||||  |||||||||||    
T  411876 aagtcttgtcacgcaggcctcatcaaaatatctcataaa--ttcagttaaac 411827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 187
Target Start/End: Original strand, 7728 - 7882
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcct----------ttatcaacaaaacagcagcggaattaaattcaa 127  Q
    |||||||||||||| ||||||||||||||||||   |||||||||||||||||||||          | ||||||| || |||||||| |||||||||||    
T  7728 aacgggatatcacacttcttaaaaatcttaaat---agataaataataatttatccttcaacataaataatcaacataaaagcagcgg-attaaattcaa 7823  T
Q  128 attatcaaaaagtcttggcacgcaggcctcat-taaacatctcataaaagttcagttaaac 187  Q
     ||   ||| ||||||||||||||||||||||  |||||||||||  ||||||||||||||    
T  7824 cttcataaatagtcttggcacgcaggcctcataaaaacatctcat--aagttcagttaaac 7882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 159
Target Start/End: Original strand, 4111 - 4225
Alignment:
Q  43 ggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaattaaattcaa-attatcaaaaagt 140  Q
    |||||||||| ||||||||||||||||| ||  ||||| |||  | |||||||| ||||||| || |||||||||||||| ||||| || || |||||||    
T  4111 ggatatcacacttcttaaaaatcttaaaaca--gataattaactaattatccttcatcaacataatagcagcggaattaa-ttcaacatcat-aaaaagt 4206  T
Q  141 cttggcacgcaggcctcat 159  Q
    |||||||||||||||||||    
T  4207 cttggcacgcaggcctcat 4225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1098 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1098
Description:

Target: scaffold1098; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 173
Target Start/End: Original strand, 2370 - 2513
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatccttta----------tcaacaaaacagcagcggaattaaattcaa 127  Q
    |||||||||||||| |||||||||||||||||    |||||||||||||||||||||| |          |||||  || ||||||||||||||||||||    
T  2370 aacgggatatcacacttcttaaaaatcttaaaa---agataaataataatttatccttaaacataaatcatcaacgtaatagcagcggaattaaattcaa 2466  T
Q  128 -attatcaaaaagtcttggcacgcaggcctcattaa-acatctcataa 173  Q
     || || |||||||||||||||||||||||||| || |||||||||||    
T  2467 catcat-aaaaagtcttggcacgcaggcctcataaatacatctcataa 2513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 694 - 544
Alignment:
Q  19 aatcagagtaatcatcaaacaacgggatatcacattcttaaaaatcttaaatcatagataaataataatttatcctttatcaacaaaacagcagcggaat 118  Q
    ||||||||||| || || | ||| ||||||||||||  | ||||||| |||  |||||||||| ||||||||||||| ||||  ||    ||||||||||    
T  694 aatcagagtaaacaacataaaacaggatatcacatttcttaaaatctcaaa--atagataaatcataatttatccttcatcataaa----gcagcggaat 601  T
Q  119 taaattcaaattatcaaaaagtcttggcacgcaggcctcat--taaacatctcataaa 174  Q
    ||| ||||||||   ||| ||||||||||||||||||||||  ||| |||||||||||    
T  600 taa-ttcaaattcataaatagtcttggcacgcaggcctcataataatcatctcataaa 544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 39 - 173
Target Start/End: Original strand, 25186 - 25329
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatccttta----------tcaacaaaacagcagcggaattaaattcaa 127  Q
    |||||||||||||| |||||||||||||||||    |||||||||||||||||||||| |          |||||  || ||||||||||||||||||||    
T  25186 aacgggatatcacacttcttaaaaatcttaaaa---agataaataataatttatccttaaacataaatcatcaacgtaatagcagcggaattaaattcaa 25282  T
Q  128 -attatcaaaaagtcttggcacgcaggcctcattaa-acatctcataa 173  Q
     || || |||||||||||||||||||||||||| || |||||||||||    
T  25283 catcat-aaaaagtcttggcacgcaggcctcataaatacatctcataa 25329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 121047 - 121120
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    |||||||||| || || | |||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||    
T  121047 atcagagtaaacaacatataacgggatatcacacttcttaaaaatcttaaat---agataaataataatttatcctt 121120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 168870 - 168796
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    |||||||||| || || | |||||||||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  168870 atcagagtaaacaacatataacgggatatcacacttcttaaaaatctcaaa--atagataaataataatttatcctt 168796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0673 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 7920 - 8014
Alignment:
Q  139 gtcttggcacgcaggcctcattaaa-catctcataaaagttcagttaaacttcaataaatgaacacgtaaaaagatgaagcatgcataacataaacc 234  Q
    ||||||| |||||||||| || ||| |||||||||||| ||||||||||| ||| ||||| |||||||||||  |||||||||||||| ||| ||||    
T  7920 gtcttggtacgcaggcctaatcaaaacatctcataaaa-ttcagttaaacatca-taaataaacacgtaaaagaatgaagcatgcatatcattaacc 8014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 12323 - 12398
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    |||||||||| || || | |||||||||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  12323 atcagagtaaacaacatataacgggatatcacacttcttaaaaatctcaaaa-atagataaataataatttatcctt 12398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 209 - 176
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  209 atcagagtaaacatcaaacaacgggatatcacat 176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 159
Target Start/End: Complemental strand, 29625 - 29574
Alignment:
Q  108 agcagcggaattaaattcaaattatcaaaaagtcttggcacgcaggcctcat 159  Q
    |||||||||||||||||||||||   ||| ||||||||||||||||||||||    
T  29625 agcagcggaattaaattcaaattcataaatagtcttggcacgcaggcctcat 29574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1655 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1655
Description:

Target: scaffold1655; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 637 - 692
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    |||||||||||||| ||||||||||||| |||  ||||||||||||||||||||||||    
T  637 aacgggatatcacacttcttaaaaatctcaaa--atagataaataataatttatcctt 692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1172 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold1172
Description:

Target: scaffold1172; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 159
Target Start/End: Original strand, 2063 - 2209
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatccttta----------tcaacaaaaca 108  Q
    |||||||||| || || | |||||||||||||| |||||| |||||| ||||   ||||||||||||||||||||||||          |||||| ||||    
T  2063 atcagagtaaacaacatataacgggatatcacacttcttacaaatctcaaat---agataaataataatttatcctttaacataaaacttcaacataaca 2159  T
Q  109 gcagcggaattaaattcaa-attatcaaaaagtcttggcacgcaggcctcat 159  Q
    ||||||||||| ||||||| || || ||| ||||||||||||||||||||||    
T  2160 gcagcggaatt-aattcaacatcat-aaatagtcttggcacgcaggcctcat 2209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 31743 - 31816
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    |||||||||| || || | |||| ||||||||| ||||||||||||||||||   ||||||||||||||||||||||    
T  31743 atcagagtaaacaacagataacgtgatatcacacttcttaaaaatcttaaat---agataaataataatttatcctt 31816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 13218 - 13286
Alignment:
Q  108 agcagcggaattaaattcaaattatcaaaaagtcttggcacgcaggcctcat--taaacatctcataaa 174  Q
    |||||| ||||||||||||||||   ||| ||||||||||||||||||||||  ||| |||||||||||    
T  13218 agcagcagaattaaattcaaattcataaatagtcttggcacgcaggcctcataataatcatctcataaa 13286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 173
Target Start/End: Original strand, 31854 - 31890
Alignment:
Q  137 aagtcttggcacgcaggcctcattaaacatctcataa 173  Q
    ||||||||||||||||||||||| |||||||||||||    
T  31854 aagtcttggcacgcaggcctcatcaaacatctcataa 31890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 52944 - 52894
Alignment:
Q  137 aagtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaac 187  Q
    ||||||||||||||||||||||| ||| |||||||||   |||||||||||    
T  52944 aagtcttggcacgcaggcctcatcaaatatctcataattattcagttaaac 52894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 33; Significance: 0.000000001; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 43005 - 43041
Alignment:
Q  138 agtcttggcacgcaggcctcattaaacatctcataaa 174  Q
    |||||||||||| ||||||||||||||||||||||||    
T  43005 agtcttggcacgaaggcctcattaaacatctcataaa 43041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 76725 - 76761
Alignment:
Q  138 agtcttggcacgcaggcctcattaaacatctcataaa 174  Q
    |||||||||||| ||||||||||||||||||||||||    
T  76725 agtcttggcacgaaggcctcattaaacatctcataaa 76761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 73220 - 73256
Alignment:
Q  138 agtcttggcacgcaggcctcattaaacatctcataaa 174  Q
    |||||||||||| ||||||||| ||||||||||||||    
T  73220 agtcttggcacgaaggcctcatcaaacatctcataaa 73256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 33; Significance: 0.000000001; HSPs: 5)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 159
Target Start/End: Complemental strand, 193779 - 193728
Alignment:
Q  108 agcagcggaattaaattcaa-attatcaaaaagtcttggcacgcaggcctcat 159  Q
    |||||||||||||||||||| ||||| |||| |||||||||||||||||||||    
T  193779 agcagcggaattaaattcaacattattaaaa-gtcttggcacgcaggcctcat 193728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 193877 - 193800
Alignment:
Q  16 aataatcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    |||||||||||||| || || | |||||||||||||| ||||| ||||||| |||  |||||||||| |||||||||||||    
T  193877 aataatcagagtaaacaacatataacgggatatcacacttctt-aaaatctcaaa--atagataaatcataatttatcctt 193800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 16077 - 16037
Alignment:
Q  15 caataatcagagtaatcatcaaacaacgggatatcacattc 55  Q
    |||| |||||||||||||||||  |||||||||||||||||    
T  16077 caattatcagagtaatcatcaattaacgggatatcacattc 16037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 20599 - 20559
Alignment:
Q  15 caataatcagagtaatcatcaaacaacgggatatcacattc 55  Q
    |||| |||||||||||||||||  |||||||||||||||||    
T  20599 caattatcagagtaatcatcaattaacgggatatcacattc 20559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 21730 - 21690
Alignment:
Q  15 caataatcagagtaatcatcaaacaacgggatatcacattc 55  Q
    |||| |||||||||||||||||  |||||||||||||||||    
T  21730 caattatcagagtaatcatcaattaacgggatatcacattc 21690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 16908 - 16958
Alignment:
Q  43 ggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    |||||||||| ||||||||||||||||||   ||||||||||||||||||||||    
T  16908 ggatatcacacttcttaaaaatcttaaat---agataaataataatttatcctt 16958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 159
Target Start/End: Original strand, 46330 - 46381
Alignment:
Q  108 agcagcggaattaaattcaaattatcaaaaagtcttggcacgcaggcctcat 159  Q
    |||||||||||||||||||||||   ||  ||||||||||||||||||||||    
T  46330 agcagcggaattaaattcaaattcataagtagtcttggcacgcaggcctcat 46381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 91
Target Start/End: Original strand, 65783 - 65833
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttat 91  Q
    |||||||||||||| ||||||||||||||||||   ||||||||||||||||||    
T  65783 aacgggatatcacacttcttaaaaatcttaaat---agataaataataatttat 65833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 8865 - 8815
Alignment:
Q  137 aagtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaac 187  Q
    |||||||||||||||||| |||| |||||||||||||   |||||||||||    
T  8865 aagtcttggcacgcaggcgtcatcaaacatctcataattattcagttaaac 8815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 26254 - 26327
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    |||||||||| || || | |||||||||||||| |||||| || ||||||||   ||||||||||||||||||||||    
T  26254 atcagagtaaacaacagataacgggatatcacacttcttacaattcttaaat---agataaataataatttatcctt 26327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 187
Target Start/End: Original strand, 1275 - 1325
Alignment:
Q  137 aagtcttggcacgcaggcctcattaaacatctcataaaagttcagttaaac 187  Q
    |||| |||||| ||||||||||| ||||||||||||||  |||||||||||    
T  1275 aagtattggcatgcaggcctcatcaaacatctcataaatattcagttaaac 1325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 15383 - 15456
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcctt 95  Q
    |||||||||| || || | || ||||||||||| ||||||||||| ||||||   ||||||||||||||||||||||    
T  15383 atcagagtaaacaacagataaagggatatcacacttcttaaaaatgttaaat---agataaataataatttatcctt 15456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 40 - 7
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  40 atcagagtaaacatcaaacaacgggatatcacat 7  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 159
Target Start/End: Original strand, 12636 - 12687
Alignment:
Q  108 agcagcggaattaaattcaa-attatcaaaaagtcttggcacgcaggcctcat 159  Q
    |||||||||||||||||||| || || ||||||||||||||| ||||||||||    
T  12636 agcagcggaattaaattcaacatcat-aaaaagtcttggcacacaggcctcat 12687  T

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Target: scaffold0031 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 127996 - 128049
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatcct 94  Q
    |||||||||||||| |||||| |||||||||||   |||||||||||||||||||||    
T  127996 aacgggatatcacacttcttagaaatcttaaat---agataaataataatttatcct 128049  T

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Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 175
Target Start/End: Original strand, 84597 - 84635
Alignment:
Q  137 aagtcttggcacgcaggcctcattaaacatctcataaaa 175  Q
    ||||||||||||| ||||||||| |||||||||||||||    
T  84597 aagtcttggcacgtaggcctcatcaaacatctcataaaa 84635  T

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Target: scaffold1212 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1212
Description:

Target: scaffold1212; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 2350 - 2383
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  2350 atcagagtaaacatcaaacaacgggatatcacat 2383  T

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Target: scaffold0810 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 175
Target Start/End: Original strand, 2043 - 2084
Alignment:
Q  134 aaaaagtcttggcacgcaggcctcattaaacatctcataaaa 175  Q
    |||||||||||||||| ||||||| | |||||||||||||||    
T  2043 aaaaagtcttggcacgtaggcctcgtcaaacatctcataaaa 2084  T

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Target: scaffold0490 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 1292 - 1352
Alignment:
Q  116 aattaaattcaaattatcaaaaagtcttggcacgcaggcctcat--taaacatctcataaa 174  Q
    |||||||||||||||   ||| ||||||||||||||||||||||  ||| |||||||||||    
T  1292 aattaaattcaaattcataaatagtcttggcacgcaggcctcataataatcatctcataaa 1352  T

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Target: scaffold0379 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 283 - 250
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  283 atcagagtaaacatcaaacaacgggatatcacat 250  T

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Target: scaffold0379; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 11562 - 11595
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  11562 atcagagtaaacatcaaacaacgggatatcacat 11595  T

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Target: scaffold0252 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0252
Description:

Target: scaffold0252; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 24520 - 24553
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  24520 atcagagtaaacatcaaacaacgggatatcacat 24553  T

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Target: scaffold0218 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 25581 - 25614
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  25581 atcagagtaaacatcaaacaacgggatatcacat 25614  T

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Target: scaffold0090 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 97
Target Start/End: Complemental strand, 29985 - 29929
Alignment:
Q  39 aacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatccttta 97  Q
    |||||||||||||| ||||||||||| | ||||   ||||||||||||||||||||||||    
T  29985 aacgggatatcacacttcttaaaaatatcaaat---agataaataataatttatccttta 29929  T

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Target: scaffold0032 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 101618 - 101585
Alignment:
Q  20 atcagagtaatcatcaaacaacgggatatcacat 53  Q
    |||||||||| |||||||||||||||||||||||    
T  101618 atcagagtaaacatcaaacaacgggatatcacat 101585  T

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Target: scaffold0598 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 1890 - 1816
Alignment:
Q  17 ataatcagagtaatcatcaaacaacgggatatcaca-ttcttaaaaatcttaaatcatagataaataataatttatc 92  Q
    ||||||||||||| || || | |||||||||||||| ||||||||| ||| |||  |||||||||||||||||||||    
T  1890 ataatcagagtaaacaacatataacgggatatcacacttcttaaaa-tctcaaaa-atagataaataataatttatc 1816  T

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Target: scaffold0530 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 1843 - 1794
Alignment:
Q  137 aagtcttggcacgcaggcctcat-taaacatctcataaaagttcagttaaac 187  Q
    |||||||||||||||||||||||  ||||||||||||||  |||||||||||    
T  1843 aagtcttggcacgcaggcctcatcaaaacatctcataaa--ttcagttaaac 1794  T

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Target: scaffold0273 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 187
Target Start/End: Complemental strand, 10797 - 10748
Alignment:
Q  137 aagtcttggcacgcaggcctcat-taaacatctcataaaagttcagttaaac 187  Q
    |||||||||||||||||||||||  ||||||||||||||  |||||||||||    
T  10797 aagtcttggcacgcaggcctcatcaaaacatctcataaa--ttcagttaaac 10748  T

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Target: scaffold0158 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 2116 - 2152
Alignment:
Q  19 aatcagagtaatcatcaaacaacgggatatcacattc 55  Q
    ||||||||||||||||| | |||||||||||||||||    
T  2116 aatcagagtaatcatcacaaaacgggatatcacattc 2152  T

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Target: scaffold0113 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 31403 - 31451
Alignment:
Q  108 agcagcggaattaaattcaaattatcaaaaagtcttggcacgcaggcct 156  Q
    |||||||||||||||||||| ||   ||| |||||||||||||||||||    
T  31403 agcagcggaattaaattcaacttcataaatagtcttggcacgcaggcct 31451  T

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Target: scaffold0037 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 175
Target Start/End: Complemental strand, 22295 - 22255
Alignment:
Q  136 aaagtcttggcacgcaggcctcatt-aaacatctcataaaa 175  Q
    ||||||||||||||||||||||||| |||||| ||||||||    
T  22295 aaagtcttggcacgcaggcctcattaaaacatatcataaaa 22255  T

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Target: scaffold0015 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 195802 - 195762
Alignment:
Q  15 caataatcagagtaatcatcaaacaacgggatatcacattc 55  Q
    |||| |||||||||||||||||  |||||||||||||||||    
T  195802 caattatcagagtaatcatcaattaacgggatatcacattc 195762  T

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