View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3485_low_57 (Length: 226)

Name: NF3485_low_57
Description: NF3485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3485_low_57
NF3485_low_57
[»] chr7 (34 HSPs)
chr7 (1-226)||(2349393-2349618)
chr7 (1-226)||(748000-748225)
chr7 (1-226)||(20100578-20100803)
chr7 (1-222)||(8257550-8257771)
chr7 (1-226)||(22257192-22257417)
chr7 (5-226)||(22232586-22232807)
chr7 (5-226)||(22253932-22254153)
chr7 (1-214)||(5826679-5826892)
chr7 (1-225)||(11825315-11825539)
chr7 (1-194)||(8397779-8397971)
chr7 (1-226)||(2251805-2252029)
chr7 (1-226)||(23598723-23598947)
chr7 (1-226)||(26182236-26182460)
chr7 (1-226)||(709977-710201)
chr7 (1-159)||(8257822-8257980)
chr7 (1-159)||(23467194-23467352)
chr7 (1-226)||(26460400-26460623)
chr7 (1-140)||(43549127-43549266)
chr7 (1-151)||(6964221-6964371)
chr7 (1-126)||(22083502-22083627)
chr7 (62-226)||(42606279-42606440)
chr7 (4-140)||(16546940-16547076)
chr7 (4-140)||(16618586-16618722)
chr7 (52-151)||(38431378-38431477)
chr7 (1-140)||(44017837-44017976)
chr7 (54-226)||(23775868-23776040)
chr7 (1-140)||(3541213-3541352)
chr7 (1-140)||(26153085-26153224)
chr7 (55-140)||(6214420-6214505)
chr7 (43-140)||(26808775-26808871)
chr7 (69-132)||(17601686-17601749)
chr7 (85-130)||(28577972-28578017)
chr7 (99-144)||(30058192-30058237)
chr7 (85-130)||(42859008-42859052)
[»] chr3 (35 HSPs)
chr3 (1-225)||(25888428-25888652)
chr3 (1-203)||(30158009-30158211)
chr3 (1-225)||(10959835-10960059)
chr3 (1-225)||(10963342-10963566)
chr3 (1-225)||(10966851-10967075)
chr3 (1-225)||(2784056-2784279)
chr3 (1-226)||(4225810-4226035)
chr3 (1-226)||(2279575-2279802)
chr3 (1-226)||(6173311-6173535)
chr3 (1-226)||(16314548-16314772)
chr3 (1-226)||(16414714-16414938)
chr3 (1-226)||(18495542-18495766)
chr3 (1-226)||(23374688-23374912)
chr3 (1-159)||(18883148-18883306)
chr3 (1-226)||(18515688-18515912)
chr3 (1-226)||(29233547-29233770)
chr3 (1-140)||(19868917-19869056)
chr3 (1-226)||(5886943-5887166)
chr3 (1-226)||(5896927-5897150)
chr3 (1-159)||(42354437-42354595)
chr3 (46-226)||(20536542-20536722)
chr3 (1-159)||(9157923-9158081)
chr3 (46-151)||(27054850-27054956)
chr3 (1-140)||(4250320-4250459)
chr3 (1-140)||(28327378-28327517)
chr3 (1-140)||(28330703-28330842)
chr3 (1-130)||(9154750-9154879)
chr3 (46-159)||(18551648-18551761)
chr3 (1-140)||(3305784-3305923)
chr3 (148-225)||(44508822-44508899)
chr3 (52-130)||(54736183-54736262)
chr3 (42-140)||(36037000-36037097)
chr3 (1-82)||(44508743-44508824)
chr3 (69-130)||(11271060-11271120)
chr3 (85-130)||(26822313-26822358)
[»] chr8 (25 HSPs)
chr8 (1-226)||(22654197-22654422)
chr8 (5-226)||(27863512-27863734)
chr8 (1-225)||(5964191-5964415)
chr8 (1-225)||(20262490-20262714)
chr8 (1-225)||(21049120-21049344)
chr8 (1-226)||(18695934-18696159)
chr8 (1-223)||(17012995-17013216)
chr8 (1-153)||(14187936-14188088)
chr8 (1-223)||(17543985-17544206)
chr8 (1-159)||(30645408-30645566)
chr8 (1-226)||(24434966-24435190)
chr8 (1-226)||(24445012-24445236)
chr8 (1-226)||(24903444-24903668)
chr8 (1-151)||(13332023-13332173)
chr8 (1-159)||(31981283-31981441)
chr8 (53-140)||(5828013-5828100)
chr8 (1-151)||(39659992-39660141)
chr8 (102-226)||(453624-453747)
chr8 (137-225)||(14188242-14188330)
chr8 (85-159)||(31986294-31986368)
chr8 (55-140)||(587302-587387)
chr8 (55-140)||(626535-626620)
chr8 (1-82)||(31984924-31985005)
chr8 (104-151)||(9467108-9467155)
chr8 (92-150)||(31468159-31468217)
[»] chr5 (24 HSPs)
chr5 (1-225)||(34652715-34652939)
chr5 (1-224)||(4731792-4732015)
chr5 (43-225)||(3195070-3195252)
chr5 (1-225)||(28562320-28562543)
chr5 (1-225)||(28565888-28566111)
chr5 (1-225)||(26548028-26548251)
chr5 (1-225)||(26551587-26551810)
chr5 (1-225)||(40799877-40800100)
chr5 (1-159)||(19686104-19686262)
chr5 (1-159)||(2453217-2453375)
chr5 (1-226)||(26726880-26727104)
chr5 (1-159)||(19689487-19689645)
chr5 (1-126)||(17944585-17944710)
chr5 (1-140)||(33320969-33321108)
chr5 (1-221)||(25185321-25185523)
chr5 (1-144)||(2500049-2500192)
chr5 (46-140)||(9690742-9690836)
chr5 (1-140)||(26337917-26338056)
chr5 (56-140)||(35432535-35432619)
chr5 (1-65)||(1810528-1810592)
chr5 (69-130)||(36335165-36335226)
chr5 (92-140)||(1810477-1810525)
chr5 (84-130)||(36330741-36330787)
chr5 (1-78)||(33921076-33921153)
[»] chr4 (19 HSPs)
chr4 (1-225)||(18859713-18859937)
chr4 (63-225)||(17670309-17670471)
chr4 (1-226)||(3719456-3719680)
chr4 (1-226)||(14701840-14702064)
chr4 (1-159)||(11702613-11702771)
chr4 (1-226)||(49636484-49636707)
chr4 (1-226)||(3734248-3734471)
chr4 (1-226)||(49639777-49640000)
chr4 (46-226)||(23653254-23653434)
chr4 (43-159)||(10247792-10247908)
chr4 (1-140)||(13979068-13979207)
chr4 (1-151)||(15851107-15851257)
chr4 (46-140)||(19928859-19928953)
chr4 (46-140)||(26703536-26703630)
chr4 (16-159)||(10385890-10386026)
chr4 (1-121)||(33400392-33400510)
chr4 (52-226)||(11560799-11560972)
chr4 (55-125)||(24605307-24605377)
chr4 (55-140)||(7394916-7395000)
[»] chr2 (19 HSPs)
chr2 (5-225)||(11056280-11056500)
chr2 (1-225)||(11059734-11059958)
chr2 (1-225)||(13518239-13518462)
chr2 (1-226)||(18011885-18012102)
chr2 (1-226)||(29435685-29435909)
chr2 (1-226)||(15703929-15704154)
chr2 (1-226)||(15719233-15719458)
chr2 (7-225)||(22592454-22592671)
chr2 (1-159)||(1506663-1506821)
chr2 (1-159)||(1503459-1503617)
chr2 (1-226)||(18938829-18939052)
chr2 (43-159)||(4577801-4577917)
chr2 (1-140)||(30719709-30719848)
chr2 (1-140)||(40677817-40677956)
chr2 (1-151)||(38316081-38316231)
chr2 (1-130)||(38326320-38326455)
chr2 (85-130)||(40139140-40139185)
chr2 (85-150)||(32074436-32074501)
chr2 (106-142)||(25925173-25925209)
[»] chr6 (28 HSPs)
chr6 (1-225)||(3826778-3827002)
chr6 (1-225)||(14966165-14966389)
chr6 (28-225)||(14969672-14969869)
chr6 (43-226)||(11410741-11410923)
chr6 (5-226)||(2331220-2331441)
chr6 (1-224)||(17231790-17232013)
chr6 (1-226)||(22920463-22920687)
chr6 (5-159)||(34502281-34502435)
chr6 (1-205)||(2330564-2330768)
chr6 (1-212)||(17696524-17696736)
chr6 (1-158)||(5618244-5618398)
chr6 (1-140)||(28117774-28117913)
chr6 (88-225)||(13095679-13095816)
chr6 (48-151)||(35027167-35027270)
chr6 (1-140)||(9313830-9313969)
chr6 (1-140)||(28894526-28894665)
chr6 (52-187)||(31123418-31123553)
chr6 (46-140)||(15578960-15579054)
chr6 (46-140)||(33679234-33679328)
chr6 (1-140)||(12746740-12746882)
chr6 (46-128)||(7560232-7560314)
chr6 (68-144)||(7560140-7560216)
chr6 (4-134)||(11296189-11296319)
chr6 (1-72)||(14969602-14969673)
chr6 (55-126)||(20189489-20189560)
chr6 (55-126)||(22146431-22146502)
chr6 (55-126)||(16731362-16731433)
chr6 (92-140)||(6856608-6856656)
[»] chr1 (18 HSPs)
chr1 (1-225)||(28918309-28918533)
chr1 (1-226)||(17902747-17902971)
chr1 (1-226)||(37641802-37642026)
chr1 (1-226)||(49719789-49720013)
chr1 (1-226)||(49716307-49716531)
chr1 (1-226)||(20981294-20981518)
chr1 (1-226)||(24200204-24200428)
chr1 (1-226)||(20964391-20964614)
chr1 (1-226)||(16838894-16839117)
chr1 (1-226)||(16848824-16849047)
chr1 (1-151)||(18392327-18392476)
chr1 (1-151)||(34552718-34552868)
chr1 (46-151)||(6205859-6205965)
chr1 (46-140)||(33898305-33898399)
chr1 (1-140)||(23441329-23441468)
chr1 (46-140)||(50197004-50197098)
chr1 (48-140)||(3087770-3087862)
chr1 (92-141)||(5317892-5317941)
[»] scaffold0360 (2 HSPs)
scaffold0360 (43-225)||(2430-2612)
scaffold0360 (1-226)||(6220-6445)
[»] scaffold0062 (2 HSPs)
scaffold0062 (1-226)||(52841-53066)
scaffold0062 (1-226)||(67790-68015)
[»] scaffold0012 (1 HSPs)
scaffold0012 (1-226)||(26838-27063)
[»] scaffold0067 (1 HSPs)
scaffold0067 (1-226)||(27296-27520)
[»] scaffold0214 (3 HSPs)
scaffold0214 (1-159)||(13541-13698)
scaffold0214 (1-159)||(27557-27714)
scaffold0214 (2-159)||(19991-20148)
[»] scaffold0175 (1 HSPs)
scaffold0175 (43-226)||(28619-28801)
[»] scaffold0134 (1 HSPs)
scaffold0134 (1-149)||(7172-7320)
[»] scaffold1048 (1 HSPs)
scaffold1048 (1-226)||(1336-1559)
[»] scaffold0273 (1 HSPs)
scaffold0273 (47-141)||(19800-19894)
[»] scaffold0083 (2 HSPs)
scaffold0083 (1-140)||(29256-29395)
scaffold0083 (1-151)||(53053-53203)
[»] scaffold0401 (1 HSPs)
scaffold0401 (4-140)||(4196-4332)
[»] scaffold0043 (2 HSPs)
scaffold0043 (1-140)||(13526-13665)
scaffold0043 (102-140)||(5632-5670)
[»] scaffold0007 (1 HSPs)
scaffold0007 (57-140)||(92423-92506)
[»] scaffold0014 (3 HSPs)
scaffold0014 (85-159)||(228652-228726)
scaffold0014 (1-82)||(227282-227363)
scaffold0014 (119-159)||(223760-223800)


Alignment Details
Target: chr7 (Bit Score: 190; Significance: 1e-103; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 2349393 - 2349618
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2349393 ataggaaattgaggattatgacacatgaattaacgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaaagttataacttaggaaag 2349492  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2349493 ggttttgagtcgagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactattcatataaagca 2349592  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    ||| || ||||||| |||||||||||    
T  2349593 ataacggattcatcggcttaatcatt 2349618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 748225 - 748000
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  748225 ataggaaattgaggattatgatacatgaattaacgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaag 748126  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  748125 ggttttgagtcaggagattgatcaaaactacttagttaatttgtcgtaaagattgaatagtaattaggaataaatagaggtaaactacttatataaagca 748026  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||||| |||||| ||||||||||||    
T  748025 atagcggattcattagcttaatcatt 748000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 20100578 - 20100803
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||| |||| ||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20100578 ataggaaattgaagattgtgacacatgaattaacgtacttttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaag 20100677  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20100678 ggttttgagtcaagagattgatcaaaactacttagttaatttttcgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 20100777  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||||| ||||||| |||||||||||    
T  20100778 atagcggattcatcggcttaatcatt 20100803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 8257771 - 8257550
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||| |||||||||||||| ||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8257771 ataggagattgaggattatgacacatgaaataatgttctgttattgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaag 8257672  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  8257671 ggttttgagtcaagagattgatcaaaaccacttagttaatttgtcgtaaagattgaatagtaattaagaataaagggaggtaaactactcatataaatca 8257572  T
Q  201 atagcgaattcatcagcttaat 222  Q
    |||||| |||||||||||||||    
T  8257571 atagcggattcatcagcttaat 8257550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 22257192 - 22257417
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||| |||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  22257192 ataggaaattgaggatcatgacacatgaattaacgtacttttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaagaaag 22257291  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  22257292 ggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaagattaaatagtaattaggaataaagggaggtaaactactcatataaaaca 22257391  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| |||||||||||    
T  22257392 ataggggattcatcggcttaatcatt 22257417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 22232807 - 22232586
Alignment:
Q  5 gaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgtt 104  Q
    |||||||||||| |||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||    
T  22232807 gaaattgaggatcatgacacatgaattaacgtacttttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaagaaagggtt 22232708  T
Q  105 ttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagcaatag 204  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||    
T  22232707 ttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaagattaaatagtaattaggaataaagggaggtaaactactcatataaaataatag 22232608  T
Q  205 cgaattcatcagcttaatcatt 226  Q
     | ||||||| |||||||||||    
T  22232607 gggattcatcggcttaatcatt 22232586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 5 - 226
Target Start/End: Original strand, 22253932 - 22254153
Alignment:
Q  5 gaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgtt 104  Q
    |||||||||||| |||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||    
T  22253932 gaaattgaggatcatgacacatgaattaacgtacttttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaagaaagggtt 22254031  T
Q  105 ttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagcaatag 204  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||    
T  22254032 ttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaagattaaatagtaattaggaataaagggaggtaaactactcatataaaataatag 22254131  T
Q  205 cgaattcatcagcttaatcatt 226  Q
     | ||||||| |||||||||||    
T  22254132 gggattcatcggcttaatcatt 22254153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 5826892 - 5826679
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||| ||||  |||||||||| || ||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  5826892 ataggaaattgaggatcatgactcatgaattaacgtacttttatcgcttctgcggttattcaatcggtttaagagattaaaagattataacttaggaaag 5826793  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5826792 ggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaagattgaatagtaattagtaataaagggaggtaaactactcatataaagca 5826693  T
Q  201 atagcgaattcatc 214  Q
    ||| || |||||||    
T  5826692 ataacggattcatc 5826679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 11825539 - 11825315
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || ||||  |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  11825539 ataggaaattgagaatcatgacccatgaattaacgttcttttatcgcttccgcggttattcaatcggtttaaaagattaaaaggttataacttaggaaag 11825440  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||    
T  11825439 ggttttgagtcaagagattgatcaaatctacttagttaatttgtcgtaaagattgaatagtaattagtaataaagggaggtaaactactcatatagaaca 11825340  T
Q  201 atagcgaattcatcagcttaatcat 225  Q
    |||| | ||||||| ||||||||||    
T  11825339 ataggggattcatcggcttaatcat 11825315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 8397779 - 8397971
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||| ||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  8397779 ataggaaattgaggatcatgactcatgaattaacgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaaggttatagcttaggaaag 8397878  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatat 194  Q
     ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  8397879 ggttttgagtcaagagattgatcaaatctacttagttaatttgtcgtaaagattgaatagtaattaggaataaa-ggaggtaaacttctcatat 8397971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 2251805 - 2252029
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  2251805 ataggaaattgagaatcatgacatatgaattaacgttcttttatcgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaag 2251904  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| ||||||||||||||||||| | || ||||||| || ||||||| |||||||||||||| ||  ||||||||| || |||||||||| | ||    
T  2251905 ggttttgattcaagagattgatcaaaaccaatttgttaattcgtcgtaaagaatgaatagtaattagtaaataagggaggt-aattactcatatagaaca 2252003  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| |||||||||||    
T  2252004 ataggggattcatcggcttaatcatt 2252029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 23598947 - 23598723
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||| ||||| || |||| | ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  23598947 ataggaatttgagaatcatgacatatgaattaacgttcttttatcgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaag 23598848  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| ||||||||||||||||||| | || |||||||||| ||||||| |||||||||||||| ||  ||||||||| || |||||||||| | ||    
T  23598847 ggttttgattcaagagattgatcaaaaccaatttgttaatttgtcgtaaagaatgaatagtaattagtaaataagggaggt-aattactcatatagaaca 23598749  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| |||||||||||    
T  23598748 ataggggattcatcggcttaatcatt 23598723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 26182236 - 26182460
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||| |||||||||||||||| || ||||||||||| |||||||||||||||| |||||||||||||||||    
T  26182236 ataggaaattgagaatcatgacatatgaattaacgttcttttatcgcttctgcagttattcaatcagtttaagagattaaaaggttataacttaggaaag 26182335  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| ||||||||||||||||||||| || ||||||| || ||||||| |||||||||||||| ||  ||||||||| || |||||||||| | ||    
T  26182336 ggttttgactcaagagattgatcaaaactaatttgttaattcgtcgtaaagaatgaatagtaattagtaaataagggaggt-aattactcatatagaaca 26182434  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| |||||||||||    
T  26182435 ataggggattcatcggcttaatcatt 26182460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 710201 - 709977
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||| || ||   || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  710201 ataggaaattgagaatcatgacatatgaattaacgtcctgacattgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaaa 710102  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| ||||||||||||||||||| | || |||||||||| ||||||| |||||||||||||| ||  ||||||||| ||||||||||||| | ||    
T  710101 ggttttgattcaagagattgatcaaaaccaatttgttaatttgtcgtaaagaatgaatagtaattagtaaataagggaggt-aactactcatatagaaca 710003  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| ||||||||| |||||||||||    
T  710002 atagggaattcatcggcttaatcatt 709977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 8257822 - 8257980
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||| ||||||| |||||| | |||||||||||||||   |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8257822 ataggagattgagggttatgacatatgaattaatgttctgacatcgcttctgcggttattcaatcggtttaagagattaaaaggttataacttaggaaag 8257921  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaata 159  Q
     ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  8257922 ggttttgagtcaagagattgatcaaaactaattagttaatttgtcgtaaagattgaata 8257980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 23467352 - 23467194
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||| |||||| | ||||||||| |||||   ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23467352 ataggaaattgagggttatgacatatgaattaaggttctgacatcgctttcgcggttattcaatcggtttaagagattaaaaggttataacttaggaaag 23467253  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaata 159  Q
     ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  23467252 ggttttgagtcaagagattgatcaaaactaattagttaatttgtcgtaaagattgaata 23467194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 26460400 - 26460623
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||| ||| ||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  26460400 ataggaaattgagaatcatgacatatgaattaacgttattt-atcgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaag 26460498  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| ||||||||||||||||||| | || ||||||| || ||||||| ||||||||||| || ||  ||||||||| || |||||||||| | ||    
T  26460499 ggttttgattcaagagattgatcaaaaccaatttgttaattcgtcgtaaagaatgaatagtaataagtaaataagggaggt-aattactcatatagaaca 26460597  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
     ||| | ||||||| |||||||||||    
T  26460598 gtaggggattcatcggcttaatcatt 26460623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 43549127 - 43549266
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||||||||   |||||| || |||||      |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43549127 ataggaaattgaggattatgacttatgaatcaacgttctcaccatgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 43549226  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
     ||||||||||||||||||||||||||| |||||||||||    
T  43549227 ggttttgagtcaagagattgatcaaaaccacttagttaat 43549266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 6964221 - 6964371
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||||||||   ||||||||| |||||      ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6964221 ataggaaattgaggattatgacttatgaattaacgttctcaccatgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaag 6964320  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaag 151  Q
      |||||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  6964321 gattttgagtcaagagattgatcaaaaccacttagttattttgtcgtaaag 6964371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 22083627 - 22083502
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||| |||||| | ||||||||| |||||   ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  22083627 ataggaaattgagggttatgacatatgaattaacgttctgacatcgcttccgcggttattcaatctgcttaagagattaaaatgttataacttaggaaag 22083528  T
Q  101 tgttttgagtcaagagattgatcaaa 126  Q
     |||||||||||||||||||||||||    
T  22083527 ggttttgagtcaagagattgatcaaa 22083502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 62 - 226
Target Start/End: Original strand, 42606279 - 42606440
Alignment:
Q  62 aatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagt 161  Q
    ||||| ||||||||||||||| || |||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||  |||||||| |||    
T  42606279 aatcgatttaagagattaaaaggt-ataatttaagaaagggttttgagtcaagagattgatcaaaactacttagttaatttgtcgt--agattgaacagt 42606375  T
Q  162 aattaggaataaagggaggtaaactactcatataaagcaatagcgaattcatcagcttaatcatt 226  Q
    | |||| ||||||||||| ||||||||||||| || | ||||||| ||||||| |||||||||||    
T  42606376 atttagtaataaagggagataaactactcatacaaggtaatagcggattcatcggcttaatcatt 42606440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 16546940 - 16547076
Alignment:
Q  4 ggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgt 103  Q
    ||||||||||  ||||||   ||||||||| |||||   || |||||| ||||||||||||| |||||||||||||||| ||||||||||||||||| ||    
T  16546940 ggaaattgagagttatgacttatgaattaacgttctgacatagcttccacggttattcaatcagtttaagagattaaaaggttataacttaggaaagggt 16547039  T
Q  104 tttgagtcaagagattgatcaaaactacttagttaat 140  Q
    |||||||||||||||||||||||||||||||||||||    
T  16547040 tttgagtcaagagattgatcaaaactacttagttaat 16547076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 4 - 140
Target Start/End: Complemental strand, 16618722 - 16618586
Alignment:
Q  4 ggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgt 103  Q
    ||||||||||  ||||||   ||||||||| |||||   || |||||| ||||||||||||| |||||||||||||||| ||||||||||||||||| ||    
T  16618722 ggaaattgagagttatgacttatgaattaacgttctgacatagcttccacggttattcaatcagtttaagagattaaaaggttataacttaggaaagggt 16618623  T
Q  104 tttgagtcaagagattgatcaaaactacttagttaat 140  Q
    |||||||||||||||||||||||||||||||||||||    
T  16618622 tttgagtcaagagattgatcaaaactacttagttaat 16618586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 52 - 151
Target Start/End: Original strand, 38431378 - 38431477
Alignment:
Q  52 gcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaag 151  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||  ||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  38431378 gcggttattcaatcggtttaagagattaaaaggttataactgaggaaatggttttgagtcaagagattgatcaaaaccacttagttaatttgtcgtaaag 38431477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 44017976 - 44017837
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||||||||   ||||||||| |||||      ||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||    
T  44017976 ataggaaattgaggattatgacttatgaattaacgttctcaccatgcttccgcgattattcaatcggtttaagagattaaaaggttataatttaggaaag 44017877  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
     |||||| |||||||||||||||||||| |||||||||||    
T  44017876 ggttttgtgtcaagagattgatcaaaaccacttagttaat 44017837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 54 - 226
Target Start/End: Original strand, 23775868 - 23776040
Alignment:
Q  54 ggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagat 153  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||| |||||| |||||||||| ||| |||| || ||||| |||||||  || | |     
T  23775868 ggttattcaattggtttaagagattaaattgttataacttaggaaagagttttgtgtcaagagatagatgaaaattaattagtcaatttgtcttagataa 23775967  T
Q  154 tgaatagtaattaggaataaagggaggtaaactactcatataaagcaatagcgaattcatcagcttaatcatt 226  Q
     ||||| | |||  || ||||||||||||||| | |||||||||||||||||| ||||| | |||||||||||    
T  23775968 cgaataattattgagagtaaagggaggtaaacgattcatataaagcaatagcggattcaccggcttaatcatt 23776040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 3541352 - 3541213
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||  ||||||   ||||||||| |||||   || |||||| ||||||||||||| |||| ||||||||||| |||||||||||||||||    
T  3541352 ataggaaattgagagttatgacttatgaattaacgttctaacatagcttccacggttattcaatcagtttcagagattaaaaggttataacttaggaaag 3541253  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
     ||||||||||||||||||||||||||| |||| ||||||    
T  3541252 ggttttgagtcaagagattgatcaaaaccacttggttaat 3541213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 26153085 - 26153224
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||||||||   ||||||||| |||||  |    ||||||| ||||||||||| |||||||||||||||| ||||| |||||||||||    
T  26153085 ataggaaattgaggattatgacttatgaattaacgttctcatcatacttccgcagttattcaatcagtttaagagattaaaaggttatgacttaggaaag 26153184  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
     |||||||||||||||||| |||||||| |||||||||||    
T  26153185 ggttttgagtcaagagattaatcaaaaccacttagttaat 26153224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 55 - 140
Target Start/End: Complemental strand, 6214505 - 6214420
Alignment:
Q  55 gttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||   ||||||||||||||||||||||| ||| | |||||||    
T  6214505 gttattcaatcggtttaagagattaaaaggttataacctaggaaaggactttgagtcaagagattgatcaaagctaataagttaat 6214420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 140
Target Start/End: Complemental strand, 26808871 - 26808775
Alignment:
Q  43 atcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
    ||||||||| | |||||||||||  || |||||||||| | |||||||| ||| ||||  ||||||||||| |||||||||||||||| | |||||||    
T  26808871 atcgcttccacagttattcaatcactt-aagagattaagaggttataacctagaaaaggattttgagtcaaaagattgatcaaaactaataagttaat 26808775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 17601686 - 17601749
Alignment:
Q  69 ttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactact 132  Q
    |||||||||||| | ||||||||||||||| | ||||||| | | |||||||||||||||||||    
T  17601686 ttaagagattaagaggttataacttaggaacgggttttgacttaggagattgatcaaaactact 17601749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 28578017 - 28577972
Alignment:
Q  85 ttataacttaggaaagtgttttgagtcaagagattgatcaaaacta 130  Q
    ||||||| |||||||| ||||||| |||||||||||||||||||||    
T  28578017 ttataacctaggaaagagttttgactcaagagattgatcaaaacta 28577972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 30058237 - 30058192
Alignment:
Q  99 agtgttttgagtcaagagattgatcaaaactacttagttaatttgt 144  Q
    |||||||||||||||| ||||||||||||||| || ||||||||||    
T  30058237 agtgttttgagtcaagggattgatcaaaactattttgttaatttgt 30058192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 42859008 - 42859052
Alignment:
Q  85 ttataacttaggaaagtgttttgagtcaagagattgatcaaaacta 130  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||    
T  42859008 ttataacttaggaaag-gttttgactcaagagattgatcaaaacta 42859052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 177; Significance: 1e-95; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 25888652 - 25888428
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||| |||||||||||| ||| ||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  25888652 atagaaaattgaggattgtgacacatgaattaacgtatttttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaat 25888553  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25888552 ggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 25888453  T
Q  201 atagcgaattcatcagcttaatcat 225  Q
    |||||| ||||||| ||||||||||    
T  25888452 atagcggattcatcggcttaatcat 25888428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 30158211 - 30158009
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||| ||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  30158211 ataggaaattgaggatcatgactcatgaattaacgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaag 30158112  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  30158111 ggttttgagtcaagagattgatcaaatctacttagttaatttgtcgtaaagattgaatagtaattaggaataaagggaggtaaacttctcatataaagca 30158012  T
Q  201 ata 203  Q
    |||    
T  30158011 ata 30158009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 10959835 - 10960059
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||| ||||  |||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||    
T  10959835 ataggaaattgaggatcatgactcatgaattaacgtacttttatcgcttccgcagttattcaatcggtttaagagattaaaagattataacttaggaaag 10959934  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10959935 ggttttgagtcaagagattgatcaaaactacttaattaatttgtcgtaaagattgaatagtaattagtaataaagggaggtaaactactcatataaagca 10960034  T
Q  201 atagcgaattcatcagcttaatcat 225  Q
    |||||| ||||||| || |||||||    
T  10960035 atagcggattcatcggcataatcat 10960059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 10963342 - 10963566
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||| ||||  |||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||    
T  10963342 ataggaaattgaggatcatgactcatgaattaacgtacttttatcgcttccgcagttattcaatcggtttaagagattaaaagattataacttaggaaag 10963441  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10963442 ggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaatattgaatagtaattagtaataaagggaggtaaactactcatataaagca 10963541  T
Q  201 atagcgaattcatcagcttaatcat 225  Q
    |||||| ||||||| || |||||||    
T  10963542 atagcggattcatcggcataatcat 10963566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 10966851 - 10967075
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||| ||||  |||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||    
T  10966851 ataggaaattgaggatcatgactcatgaattaacgtacttttatcgcttccgcagttattcaatcggtttaagagattaaaagattataacttaggaaag 10966950  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10966951 ggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaagattgaatagtaattagtaataaagggaggtaaactactcatataaagca 10967050  T
Q  201 atagcgaattcatcagcttaatcat 225  Q
    |||||| || |||| || |||||||    
T  10967051 atagcggatgcatcggcataatcat 10967075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 2784056 - 2784279
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||| ||||  |||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||    
T  2784056 ataggaaattgaggatcatgactcatgaattaacgttcttttatcgcttctgtggttattcaatcggtttaagagattaaaaggttataacttaggaaag 2784155  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||  ||||||||| ||||||||||||| | ||    
T  2784156 ggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaagatggaatagtaattagtaaataagggaggt-aactactcatatagaaca 2784254  T
Q  201 atagcgaattcatcagcttaatcat 225  Q
    |||  | ||||||| ||||||||||    
T  2784255 ataagggattcatcggcttaatcat 2784279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 4226035 - 4225810
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||| |||||| | ||||||||| ||| |   || ||||  ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  4226035 ataggaaattgagggttatgacatatgaattaacgttttgacatagcttttgcggttattcaatcggtttaagagattaaaaggttataacttaggaaag 4225936  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||| |||||||||||| | ||    
T  4225935 ggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaagattgaatagtaattgagaataaagggaggtagactactcatatagaaca 4225836  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||||| ||||| | |||||||||||    
T  4225835 atagcggattcaccggcttaatcatt 4225810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 2279802 - 2279575
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||||| ||||||||| |||||   ||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||    
T  2279802 ataggaaattgagaatcatgatatatgaattaacgttctgacatcgcttccgcagttattcaatcggtttaagagattaaagggttataacttaggaaag 2279703  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattag-gaata--aagggaggtaaactactcatataaa 197  Q
     ||||||| ||||||||||||||||||||||||||||||||||| ||||||| | |||| |||||||  ||||  ||||||||| ||||||||||||| |    
T  2279702 ggttttgattcaagagattgatcaaaactacttagttaatttgtcgtaaagactaaataataattagtaaataataagggaggt-aactactcatataga 2279604  T
Q  198 gcaatagcgaattcatcagcttaatcatt 226  Q
     |||||| | ||||||| |||||||||||    
T  2279603 acaataggggattcatcggcttaatcatt 2279575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 6173535 - 6173311
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||| ||||    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6173535 ataggaaattgagaatcatgacatatgaattaacgttcagacatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaag 6173436  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| |||||||||||||||||||||||||| |||||||| ||||||| | |||||| ||||| ||  |||||| || ||||||||||||| | ||    
T  6173435 ggttttgattcaagagattgatcaaaactacttagataatttgtcgtaaagactaaatagtgattagtaaataaggga-gttaactactcatatagaaca 6173337  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| |||||||||||    
T  6173336 ataggggattcatcggcttaatcatt 6173311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 16314772 - 16314548
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  16314772 ataggaaattgagaatcatgacatatgaattaacgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggatag 16314673  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| ||||||||||||||||||| | || ||||||| || ||||||  |||||||||||||| ||  ||| ||||| || |||||||||| | ||    
T  16314672 ggttttgattcaagagattgatcaaaaccaatttgttaattcgtcgtaaaggatgaatagtaattagtaaataagagaggt-aattactcatatagaaca 16314574  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| |||||||||||    
T  16314573 ataggggattcatcggcttaatcatt 16314548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 16414938 - 16414714
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16414938 ataggaaattgagaatcatgacatatgaattaacgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaag 16414839  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| ||||||||||||| ||||| | || ||||||| || ||||||  |||||||||||||| ||  ||| ||||| || |||||||||| | ||    
T  16414838 ggttttgattcaagagattgataaaaaccaatttgttaattcgtcgtaaaggatgaatagtaattagtaaataagagaggt-aattactcatatagaaca 16414740  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| |||||||||||    
T  16414739 ataggggattcatcggcttaatcatt 16414714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 18495766 - 18495542
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  18495766 ataggaaattgagaatcatgacatatgaattaacgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggatag 18495667  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| ||||||||||||||||||| | || ||||||| || ||||||  |||||||||||||| ||  ||| ||||| || |||||||||| | ||    
T  18495666 ggttttgattcaagagattgatcaaaaccaatttgttaattcgtcgtaaaggatgaatagtaattagtaaataagagaggt-aattactcatatagaaca 18495568  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| |||||||||||    
T  18495567 ataggggattcatcggcttaatcatt 18495542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 23374912 - 23374688
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||| ||||| || |||| | ||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  23374912 ataggaatttgagaatcatgacatatgaattaacgttcttttatagcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaag 23374813  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| ||||||||||||||||||| | || ||||||| || ||||||| ||||||||||| || ||  ||||||||| || |||||||||| | ||    
T  23374812 ggttttgattcaagagattgatcaaaaccaatttgttaattcgtcgtaaagaatgaatagtaataagtaaataagggaggt-aattactcatatagaaca 23374714  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| |||||||||||    
T  23374713 ataggggattcatcggcttaatcatt 23374688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 18883148 - 18883306
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||||||||||| | ||||||||| |||||   ||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  18883148 ataggaaattgaggattatgacatatgaattaacgttctgacatcgcttccacggttattcaattggtttaagagattaaaaggttataacttaggaaag 18883247  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaata 159  Q
     |||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||    
T  18883248 ggttttgagtcaagagattgatcaaaattaattagttaatttgtcgtaaagattgaata 18883306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 18515912 - 18515688
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  18515912 ataggaaattgagaatcatgacatatgaattaacgttcttttatcgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaag 18515813  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| ||||||||||||| ||||| | || ||||||| || ||||||  |||||||||||||| ||  ||| ||||| || |||||||||| | ||    
T  18515812 ggttttgattcaagagattgataaaaaccaatttgttaattcgtcgtaaaggatgaatagtaattagtaaataagagaggt-aattactcatatagaaca 18515714  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| | |||||||||    
T  18515713 ataggggattcatcggattaatcatt 18515688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 29233770 - 29233547
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||| |||||||||||||||| || ||||||||||| |||||||||||||||| ||||||||||| |||||    
T  29233770 ataggaaattgagaatcatgacatatgaattaacgttcttttatcgcttctgcagttattcaatcagtttaagagattaaaaggttataactta-gaaag 29233672  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| ||||||||||||||||||| | || ||||||| || ||||||| |||||||||||||| ||  ||||||||| || |||||||||| | ||    
T  29233671 ggttttgactcaagagattgatcaaaaccaatttgttaattcgtcgtaaagaatgaatagtaattagtaaataagggaggt-aattactcatatagaaca 29233573  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| |||||||||||    
T  29233572 ataggggattcatcggcttaatcatt 29233547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 19868917 - 19869056
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||||||||||| | ||||||||| ||||| |||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  19868917 ataggaaattgaggattatgacatatgaattaacgttctgttattgcttccgcggttattcaattggtttaagagattaaaaagttataacttaggaaag 19869016  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
     ||||||||||||||||||||||||||||| |||||||||    
T  19869017 agttttgagtcaagagattgatcaaaactatttagttaat 19869056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 5887166 - 5886943
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||| ||| ||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  5887166 ataggaaattgagaatcatgacatatgaattaacgttattt-atcgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaag 5887068  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| ||||||||||||||||||| | || ||||||| || ||||||| ||||||||||| || ||  ||||||||| || |||||||||| | ||    
T  5887067 ggttttgattcaagagattgatcaaaaccaatttgttaattcgtcgtaaagaatgaatagtaataagtaaataagggaggt-aattactcatatagaaca 5886969  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
     ||| | ||||||| |||||||||||    
T  5886968 gtaggggattcatcggcttaatcatt 5886943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 5897150 - 5896927
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||| ||| ||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  5897150 ataggaaattgagaatcatgacatatgaattaacgttattt-atcgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaag 5897052  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| ||||||||||||||||||| | || ||||||| || ||||||| ||||||||||| || ||  ||||||||| || |||||||||| | ||    
T  5897051 ggttttgattcaagagattgatcaaaaccaatttgttaattcgtcgtaaagaatgaatagtaataagtaaataagggaggt-aattactcatatagaaca 5896953  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
     ||| | ||||||| |||||||||||    
T  5896952 gtaggggattcatcggcttaatcatt 5896927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 42354595 - 42354437
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||| |||||| | |||||||||  ||||   |||||||| ||||||||||||||||||||||||||||||| ||| ||||||| |||||    
T  42354595 ataggaaattgagggttatgacatatgaattaacattctgacatcgcttctgcggttattcaatcggtttaagagattaaaaggttttaacttaagaaag 42354496  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaata 159  Q
     ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  42354495 ggttttgagtcaagagattgatcaaaactaattagttaatttgtcgtaaagattgaata 42354437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 46 - 226
Target Start/End: Complemental strand, 20536722 - 20536542
Alignment:
Q  46 gcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaatttgtt 145  Q
    |||| ||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||     
T  20536722 gctttcgcagttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactatttagttaatttgtc 20536623  T
Q  146 gtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagcaatagcgaattcatcagcttaatcatt 226  Q
     ||||||  ||||||| |||  || ||||||| || |||| | |||| |||| |||||||| ||||||| |||||||||||    
T  20536622 ttaaagaacgaatagttattgagagtaaagggtggaaaacgattcatgtaaaacaatagcggattcatcggcttaatcatt 20536542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 9157923 - 9158081
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||| ||||||||| |||||| | |||||||||  ||||   ||| ||||||||||||||||||| |||||||||||||||| ||||||| ||| |||||    
T  9157923 atagaaaattgagggttatgacatatgaattaacattctgacatcacttccgcggttattcaatcagtttaagagattaaaaggttataaattaagaaag 9158022  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaata 159  Q
     ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  9158023 ggttttgagtcaagagattgatcaaaactaattagttaatttgtcgtaaagattgaata 9158081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 46 - 151
Target Start/End: Original strand, 27054850 - 27054956
Alignment:
Q  46 gcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtg-ttttgagtcaagagattgatcaaaactacttagttaatttgt 144  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||    
T  27054850 gcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggtttttgagtcaagagattgatcaaaaccacttagttaatttgt 27054949  T
Q  145 tgtaaag 151  Q
     ||||||    
T  27054950 cgtaaag 27054956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 4250320 - 4250459
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||  ||||||   ||||||||| |||||   || |||||| |||||||||||||||||||||||||||||| |||||||||| ||||||    
T  4250320 ataggaaattgagagttatgacttatgaattaacgttctgacatagcttccacggttattcaatcggtttaagagattaaaaggttataacttcggaaag 4250419  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
     ||||||||||||||||||||||||||| |||||||||||    
T  4250420 ggttttgagtcaagagattgatcaaaaccacttagttaat 4250459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 28327378 - 28327517
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||||||||   ||||||||| |||||      ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  28327378 ataggaaattgaggattatgacttatgaattaacgttctcaccatgcttccgcgattattcaatcggtttaagagattaaaaggttataacttaggaaag 28327477  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
     |||||| |||||||||||||||||||| |||||||||||    
T  28327478 ggttttgtgtcaagagattgatcaaaaccacttagttaat 28327517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 28330703 - 28330842
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||||||||   ||||||||| |||||      ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  28330703 ataggaaattgaggattatgacttatgaattaacgttctcaccatgcttccgcgattattcaatcggtttaagagattaaaaggttataacttaggaaag 28330802  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
     |||||| |||||||||||||||||||| |||||||||||    
T  28330803 ggttttgtgtcaagagattgatcaaaaccacttagttaat 28330842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 9154750 - 9154879
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||| |||||| | |||||||||  ||||   ||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||    
T  9154750 ataggaaattgagggttatgacatatgaattaacattctgacatcgcttcaacggttattcaatcggtttaagagattaaaaggttataacttaggaaag 9154849  T
Q  101 tgttttgagtcaagagattgatcaaaacta 130  Q
      ||||||||||||||||||||||||||||    
T  9154850 gattttgagtcaagagattgatcaaaacta 9154879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 46 - 159
Target Start/End: Original strand, 18551648 - 18551761
Alignment:
Q  46 gcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaatttgtt 145  Q
    |||||| | |||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||  ||     
T  18551648 gcttccactgttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagacaagagattgatcaaaaccacttagttaatccgtc 18551747  T
Q  146 gtaaagattgaata 159  Q
    ||||||| ||||||    
T  18551748 gtaaagaatgaata 18551761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 3305784 - 3305923
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||||||||   ||||||||| ||||||     ||||||||| ||||||||||| ||||||||||||||| |||||||||  ||||||    
T  3305784 ataggaaattgaggattatgacttatgaattaacgttcttaccatgcttccgcgattattcaatcgatttaagagattaaaaggttataactccggaaag 3305883  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
     |||||| |||||||||||||||||||| |||||||||||    
T  3305884 ggttttgtgtcaagagattgatcaaaaccacttagttaat 3305923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 148 - 225
Target Start/End: Original strand, 44508822 - 44508899
Alignment:
Q  148 aaagattgaatagtaattaggaataaagggaggtaaactactcatataaagcaatagcgaattcatcagcttaatcat 225  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  44508822 aaagattgaatagtaattagtaataaagggaggtaaactactcatataaagcaatagcggattcatcggcttaatcat 44508899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 52 - 130
Target Start/End: Complemental strand, 54736262 - 54736183
Alignment:
Q  52 gcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtg-ttttgagtcaagagattgatcaaaacta 130  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||    
T  54736262 gcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggtttttgagtcaagagattgatcaaaacta 54736183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 42 - 140
Target Start/End: Complemental strand, 36037097 - 36037000
Alignment:
Q  42 tatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
    ||||||||||   |||||||| ||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||| ||| | |||||||    
T  36037097 tatcgcttccaaagttattca-tcggtttaagagattaaaaggttataacctaggaaagggttttgagtcaagagattgatcaaagctaataagttaat 36037000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 44508743 - 44508824
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaa 82  Q
    |||||||||||||| |||||| | ||||||||| |||||   ||||||||||||||||||||||||||||||||||||||||    
T  44508743 ataggaaattgagggttatgacatatgaattaacgttctgacatcgcttccgcggttattcaatcggtttaagagattaaaa 44508824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 11271060 - 11271120
Alignment:
Q  69 ttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaacta 130  Q
    |||||||||||| | ||||||||||||||||| ||||||| | || ||||||||||||||||    
T  11271060 ttaagagattaagaggttataacttaggaaagggttttgacttaa-agattgatcaaaacta 11271120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 26822358 - 26822313
Alignment:
Q  85 ttataacttaggaaagtgttttgagtcaagagattgatcaaaacta 130  Q
    |||||||||||||||| ||||||| |||||| ||||||||||||||    
T  26822358 ttataacttaggaaagagttttgactcaagaaattgatcaaaacta 26822313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 174; Significance: 9e-94; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 22654197 - 22654422
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||||||| ||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  22654197 ataggaaattgaggattttgacacatgaattaacgtacttttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataatttaggaaag 22654296  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     |||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  22654297 ggttttgagtcaagagattgatcaaaactacttagttaattcgtcgtaaagattgaatagtaattatgaataaagggaggtaaactactcatataaagca 22654396  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||||  ||||||| |||||||||||    
T  22654397 atagcagattcatcggcttaatcatt 22654422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 5 - 226
Target Start/End: Complemental strand, 27863734 - 27863512
Alignment:
Q  5 gaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgtt 104  Q
    |||||||||||||| || || |||||||| ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  27863734 gaaattgaggattaggacacgtgaattaacgttcttttatctcttccacgattattcaatcggtttaagagattaaaatgttataacttaggaaagggtt 27863635  T
Q  105 ttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggt-aaactactcatataaagcaata 203  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||    
T  27863634 ttgagtcaagagattgatcaaaactatttagttaatttgtcgtaaagattgaatagtaattaagaataaagggaggtaaaactactcatatagagcaata 27863535  T
Q  204 gcgaattcatcagcttaatcatt 226  Q
    ||| ||||||| |||||||||||    
T  27863534 gcggattcatcggcttaatcatt 27863512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 5964191 - 5964415
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||| ||||||||||| ||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  5964191 atagaaaattgaggatcatgactcatgaattaacgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaat 5964290  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||| | ||    
T  5964291 ggttttgagtcaagagattgatcaaatctacttagttaatttgtcgtaaagattgaatagtaattagtaataaaaggaggtaaactactcatatagaaca 5964390  T
Q  201 atagcgaattcatcagcttaatcat 225  Q
    |||| | ||||||| ||||||||||    
T  5964391 ataggggattcatcggcttaatcat 5964415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 20262490 - 20262714
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||| |||||   ||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||    
T  20262490 ataggaaattgagaatcatgacatatgaattaacgttctgacatcgcttccgcggttattcaatcggattaagagattaaaaggttataacttaagaaag 20262589  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||||||| ||||||||||||| ||||||| | |||||||||||| ||||||||||||||||||||||||||| | ||    
T  20262590 ggttttgagtcaagagattgatcaaaactaattagttaatttgtcgtaaagaataaatagtaattagtaataaagggaggtaaactactcatatagaaca 20262689  T
Q  201 atagcgaattcatcagcttaatcat 225  Q
    |||| | ||||||| ||||||||||    
T  20262690 ataggggattcatcggcttaatcat 20262714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 21049120 - 21049344
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||| |||||   ||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||    
T  21049120 ataggaaattgagaatcatgacatatgaattaacgttctgacatcgcttccgcggttattcaatcggattaagagattaaaaggttataacttaagaaag 21049219  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||||||| ||||||||||||| ||||||| | |||||||||||| ||||||||||||||||||||||||||| | ||    
T  21049220 ggttttgagtcaagagattgatcaaaactaattagttaatttgtcgtaaagaataaatagtaattagtaataaagggaggtaaactactcatatagaaca 21049319  T
Q  201 atagcgaattcatcagcttaatcat 225  Q
    |||| | ||||||| ||||||||||    
T  21049320 ataggggattcatcggcttaatcat 21049344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 18696159 - 18695934
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | |||||||||||||||   ||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  18696159 ataggaaattgagaatcatgacatatgaattaatgttctgacatctcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaag 18696060  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     |||| |||||||||||||||||||||||||||||||||||| | ||||||| | |||||||||||  || |||||||||||||||||||||||| | ||    
T  18696059 ggtttcgagtcaagagattgatcaaaactacttagttaatttatcgtaaagaataaatagtaattactaagaaagggaggtaaactactcatatagaaca 18695960  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| |||||||||||    
T  18695959 ataggggattcatcggcttaatcatt 18695934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 17013216 - 17012995
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  17013216 ataggaaattgagaatcatgacatatgaattaatgttcttttatcgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaag 17013117  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| ||||||||||||||||||| | || |||||||||| ||||||| |||||||||||||| ||  ||||||||| || |||||||||| |  |    
T  17013116 ggttttgattcaagagattgatcaaaaccaatttgttaatttgtcgtaaagaatgaatagtaattagtaaataagggaggt-aattactcatatagaaaa 17013018  T
Q  201 atagcgaattcatcagcttaatc 223  Q
    |||| | ||||||| ||||||||    
T  17013017 atagaggattcatcggcttaatc 17012995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 14187936 - 14188088
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||| |||| ||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14187936 ataggaaattgaggatcatgacacatgaattaacgtacttttatggcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaag 14188035  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagat 153  Q
     ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14188036 ggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaagat 14188088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 17543985 - 17544206
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  17543985 ataggaaattgagaatcatgacatatgaattaatgttcttttatcgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaag 17544084  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| |||||| |||||||||||| | || |||||||||| ||||||| |||||||||||||| ||  ||||||||| || |||||||||| |  |    
T  17544085 ggttttgattcaagatattgatcaaaaccaatttgttaatttgtcgtaaagaatgaatagtaattagtaaataagggaggt-aattactcatatagaaaa 17544183  T
Q  201 atagcgaattcatcagcttaatc 223  Q
    |||| | ||||||| ||||||||    
T  17544184 atagaggattcatcggcttaatc 17544206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 30645408 - 30645566
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||||||||||| | ||||||||| |||||   ||||||||| |||||||||||||||||||| ||||||||| |||| ||||||||||||    
T  30645408 ataggaaattgaggattatgacatatgaattaacgttctgacatcgcttccacggttattcaatcggtttaaaagattaaaaggttagaacttaggaaag 30645507  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaata 159  Q
     ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  30645508 ggttttgagtcaagagattgatcaaaactaattagttaatttgtcgtaaagattgaata 30645566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 24434966 - 24435190
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | | ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||     
T  24434966 ataggaaattgagaatcatgacataggaattaacgttcttttatcgcttccgcagttattcaatcggtttaagagattaaaaggttataacctaggaaaa 24435065  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| |||||||||||| |||| | |||| ||||||| || ||||||| ||||||||||| || ||  ||||||||| || |||||||||| | ||    
T  24435066 ggttttgattcaagagattgaccaaatccactttgttaattcgtcgtaaagaatgaatagtaataagtaaataagggaggt-aattactcatatagaaca 24435164  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| ||||||||| |||||||||||    
T  24435165 atagggaattcatcggcttaatcatt 24435190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 24445012 - 24445236
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | | ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||     
T  24445012 ataggaaattgagaatcatgacataggaattaacgttcttttatcgcttccgcagttattcaatcggtttaagagattaaaaggttataacctaggaaaa 24445111  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| |||||||||||| |||| | |||| ||||||| || ||||||| ||||||||||| || ||  ||||||||| || |||||||||| | ||    
T  24445112 ggttttgattcaagagattgaccaaatccactttgttaattcgtcgtaaagaatgaatagtaataagtaaataagggaggt-aattactcatatagaaca 24445210  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| ||||||||| |||||||||||    
T  24445211 atagggaattcatcggcttaatcatt 24445236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 24903668 - 24903444
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | |||||||||  | ||   |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  24903668 ataggaaattgagaatcatgacatatgaattaacatcctaacatcgcttccgcgattattcaatcggtttaagagattaaaaggttataacttaggaaag 24903569  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| ||||||||||||||||||| | || |||||||||| ||||||| |||||||||||||| ||  |||||||||||| |||| ||| | | ||    
T  24903568 ggttttgattcaagagattgatcaaaaccaatttgttaatttgtcgtaaagaatgaatagtaattagtaaataagggaggtaaa-tactaataaagaaca 24903470  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| |||||||||||    
T  24903469 ataggggattcatcggcttaatcatt 24903444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 13332023 - 13332173
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||||||||   ||||||||| |||||      |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13332023 ataggaaattgaggattatgacttatgaattaacgttctcaccatgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 13332122  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaag 151  Q
     ||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  13332123 ggttttgagtcaagagattgatcaaaaccacttagttaatttgtcgtaaag 13332173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 31981283 - 31981441
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||| || ||| | ||||||||| |||||   ||||||| || |||||||||||||||||||||||||||||  | || ||||| |||||    
T  31981283 ataggaaattgagggttgtgacatatgaattaacgttctgacatcgctttcgtggttattcaatcggtttaagagattaaaagatcattacttatgaaag 31981382  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaata 159  Q
     ||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  31981383 ggttttgaatcaagagattgatcaaaactaattagttaatttgtcgtaaagattgaata 31981441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 53 - 140
Target Start/End: Original strand, 5828013 - 5828100
Alignment:
Q  53 cggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  5828013 cggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaat 5828100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 39660141 - 39659992
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||||||||   ||||| ||| |||||      ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  39660141 ataggaaattgaggattatgacttatgaagtaacgttctcgccatgcttctgcggttattcaatcggtttaagagattaaaaggttataacttaggaaag 39660042  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaag 151  Q
     ||||||||||||||||||||||||||| ||| || |||||||| ||||||    
T  39660041 ggttttgagtcaagagattgatcaaaaccactaag-taatttgtcgtaaag 39659992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 102 - 226
Target Start/End: Original strand, 453624 - 453747
Alignment:
Q  102 gttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagcaa 201  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||| ||||||| ||| ||||||||||||||||||||||| | |||    
T  453624 gttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaagaataaataataattagtaat-aagggaggtaaactactcatatagaacaa 453722  T
Q  202 tagcgaattcatcagcttaatcatt 226  Q
    ||    ||||||| |||||||||||    
T  453723 tatgagattcatcggcttaatcatt 453747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 137 - 225
Target Start/End: Original strand, 14188242 - 14188330
Alignment:
Q  137 taatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagcaatagcgaattcatcagcttaatcat 225  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| | ||||||| ||||||||||    
T  14188242 taatttgtcgtaaagattgaatagtaattaggaataaagggaggtaaactactcatatagaacaataggggattcatcggcttaatcat 14188330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 85 - 159
Target Start/End: Original strand, 31986294 - 31986368
Alignment:
Q  85 ttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaata 159  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  31986294 ttattacttaggaaagggttttgagtcaagagattgatcaaaactaattagttaatttgtcgtaaagattgaata 31986368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 55 - 140
Target Start/End: Original strand, 587302 - 587387
Alignment:
Q  55 gttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
    |||||||||||| ||||||||||||||| |||||||| |||||||| | ||||||||||||||||||||||| ||| | |||||||    
T  587302 gttattcaatcgatttaagagattaaaaggttataacctaggaaagggctttgagtcaagagattgatcaaagctaataagttaat 587387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 55 - 140
Target Start/End: Complemental strand, 626620 - 626535
Alignment:
Q  55 gttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
    |||||||||||| ||||||||||||||| |||||||| |||||||| | ||||||||||||||||||||||| ||| | |||||||    
T  626620 gttattcaatcgatttaagagattaaaaggttataacctaggaaagggctttgagtcaagagattgatcaaagctaataagttaat 626535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 31984924 - 31985005
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaa 82  Q
    |||||||||||||| || ||| | ||||||||| |||||   ||||||| |||||||| ||||||||||||||| |||||||    
T  31984924 ataggaaattgagggttgtgacatatgaattaacgttctgacatcgctttcgcggttactcaatcggtttaagatattaaaa 31985005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 151
Target Start/End: Original strand, 9467108 - 9467155
Alignment:
Q  104 tttgagtcaagagattgatcaaaactacttagttaatttgttgtaaag 151  Q
    ||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  9467108 tttgagtcaagagattgatcaaaaacacttagttaatttgtcgtaaag 9467155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 150
Target Start/End: Complemental strand, 31468217 - 31468159
Alignment:
Q  92 ttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaa 150  Q
    ||||||||||||||||| ||||||||||||| ||||||| | |||||||| || |||||    
T  31468217 ttaggaaagtgttttgactcaagagattgatgaaaactattgagttaattcgtggtaaa 31468159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 169; Significance: 9e-91; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 34652939 - 34652715
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||| |||||| | ||||||||| |||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34652939 ataggaaattgagggttatgacatatgaattaacgttctgacatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 34652840  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||| |||||||||||||||||||||||||    
T  34652839 ggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaagaatgaatagtaattagtaataaatggaggtaaactactcatataaagca 34652740  T
Q  201 atagcgaattcatcagcttaatcat 225  Q
    |||||| ||||||| ||||||||||    
T  34652739 atagcggattcatcggcttaatcat 34652715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 4732015 - 4731792
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||||||||||| ||| ||| ||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  4732015 ataggaaattgaggattatgacacaagaactaacgtacttttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaag 4731916  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||||||||||| ||||||| | ||||| |||||||||||||||||||||||||||  |||| |||||||||||||||    
T  4731915 agttttgagtcaagagattgatcaaaactacttaattaatttttcgtaaaaattgaatagtaattaggaataaagggatttaaattactcatataaagca 4731816  T
Q  201 atagcgaattcatcagcttaatca 224  Q
    |||| | |||||||||||||||||    
T  4731815 atagtggattcatcagcttaatca 4731792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 43 - 225
Target Start/End: Original strand, 3195070 - 3195252
Alignment:
Q  43 atcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaattt 142  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3195070 atcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaattt 3195169  T
Q  143 gttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagcaatagcgaattcatcagcttaatcat 225  Q
    || ||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  3195170 gtcgtaaagaatgaatagtaattattaataaagggaggtaaactactcatataaagcaatagcgcattcatcggcttaatcat 3195252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 28562543 - 28562320
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||| ||||  |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  28562543 ataggaaattgaggatcatgactcatgaattaacgttcttttatcgcttccgtggttattcaatcggtttaagagattaaaaggttataacttaggaaag 28562444  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||  |||| |||| ||||||||||||| | ||    
T  28562443 ggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaagatggaatagtaattagtaaataaggaaggt-aactactcatatagaaca 28562345  T
Q  201 atagcgaattcatcagcttaatcat 225  Q
    |||| | ||||||| ||||||||||    
T  28562344 ataggggattcatcggcttaatcat 28562320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 28566111 - 28565888
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||| ||||  |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  28566111 ataggaaattgaggatcatgactcatgaattaacgttcttttatcgcttccgtggttattcaatcggtttaagagattaaaaggttataacttaggaaag 28566012  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||  |||| |||| ||||||||||||| | ||    
T  28566011 ggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaagatggaatagtaattagtaaataaggaaggt-aactactcatatagaaca 28565913  T
Q  201 atagcgaattcatcagcttaatcat 225  Q
    |||| | ||||||| ||||||||||    
T  28565912 ataggggattcatcggcttaatcat 28565888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 26548028 - 26548251
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||| ||||  |||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||| |||||    
T  26548028 ataggaaattgaggatcatgactcatgaattaacgttcttttatcgcttccatggttattcaatcggtttaagagattaaaaggttataacttaagaaag 26548127  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||  ||||||||| ||||||||||||| | ||    
T  26548128 ggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaagatggaatagtaattagtaaataagggaggt-aactactcatatagaaca 26548226  T
Q  201 atagcgaattcatcagcttaatcat 225  Q
    |||| | ||||||| ||||||||||    
T  26548227 ataggggattcatcggcttaatcat 26548251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 26551587 - 26551810
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||| ||||  |||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||| |||||    
T  26551587 ataggaaattgaggatcatgactcatgaattaacgttcttttatcgcttccatggttattcaatcggtttaagagattaaaaggttataacttaagaaag 26551686  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||  ||||||||| ||||||||||||| | ||    
T  26551687 ggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaagatggaatagtaattagtaaataagggaggt-aactactcatatagaaca 26551785  T
Q  201 atagcgaattcatcagcttaatcat 225  Q
    |||| | ||||||| ||||||||||    
T  26551786 ataggggattcatcggcttaatcat 26551810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 40800100 - 40799877
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||| ||||||||||| ||||  |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  40800100 atagaaaattgaggatcatgactcatgaattaacgttcttctatcgcttccgcggttattcaatcggtttaagagattaaaaagttataacttaggaaag 40800001  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||  || |||||| ||||||||||||| | ||    
T  40800000 ggttttgagttaagagattgatcaaaactacttagttaatttgtcgtaaagattgaatagtaattagtaaataaaggaggt-aactactcatatagaaca 40799902  T
Q  201 atagcgaattcatcagcttaatcat 225  Q
    |||| | ||||||| ||||||||||    
T  40799901 ataggggattcatcggcttaatcat 40799877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 19686104 - 19686262
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||||||||||| | ||||||||| |||||   |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19686104 ataggaaattgaggattatgacatatgaattaacgttctgacatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaag 19686203  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaata 159  Q
     ||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||    
T  19686204 ggttttgagtcaagagattgatcaaaactaattagttaatttgtcgtaaagattaaata 19686262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 2453217 - 2453375
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||| |||||| ||||| |||||| ||||   ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  2453217 ataggaaattgagggttatgacacatggattaattttctgacatcgcttccacggttattcaatcggtttaagagattaaaaagttataacttaggaaag 2453316  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaata 159  Q
     ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  2453317 ggttttgagtcaagagattgatcaaaactaattagttaatttgtcgtaaagattgaata 2453375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 26726880 - 26727104
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||| ||    
T  26726880 ataggaaattgagaatcatgacatatgaattaacgttcttttatcgcttccgcaattattcaatcggtttaagagattaaaaggttataacttaggacag 26726979  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| ||||||||||||| ||||| | || |||||||||| ||||||| |||||||| ||||| ||  ||||||||| || |||||||||| | ||    
T  26726980 agttttgattcaagagattgattaaaaccaatttgttaatttgtcgtaaagaatgaatagttattagtaaataagggaggt-aattactcatatagaaca 26727078  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| |||||||||||    
T  26727079 ataggggattcatcggcttaatcatt 26727104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 19689487 - 19689645
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||||||||||| | ||||||||| |||||   |||||||||  ||||||||||||||||||||||||||||| |||||||||||| ||||    
T  19689487 ataggaaattgaggattatgacatatgaattaacgttctgacatcgcttccatggttattcaatcggtttaagagattaaaaggttataacttagtaaag 19689586  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaata 159  Q
     ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  19689587 ggttttgagtcaagagattgatcaaaactaattagttaatttgtcgtaaagattgaata 19689645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 17944585 - 17944710
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||| |||||| | ||||||||| |||||   |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17944585 ataggaaattgagggttatgacatatgaattaacgttctgacatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaag 17944684  T
Q  101 tgttttgagtcaagagattgatcaaa 126  Q
     |||||||||||||||||||||||||    
T  17944685 ggttttgagtcaagagattgatcaaa 17944710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 33321108 - 33320969
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||||||||   ||||||||| |||||      ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33321108 ataggaaattgaggattatgacttatgaattaacgttctcaccatgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaag 33321009  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
     ||||||||||||||||||||||||||| |||||||||||    
T  33321008 ggttttgagtcaagagattgatcaaaaccacttagttaat 33320969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 25185321 - 25185523
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||| ||||| |||||||| ||||||||| ||||| || ||||||||||| ||||||| ||| ||||||||||||||| |||||||||||||||||    
T  25185321 ataggaaaatgaggcttatgatatatgaattaacgttctgttgtcgcttccgcgattattcattcgatttaagagattaaaaggttataacttaggaaag 25185420  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     |||||||||||                ||  |||||||||||| |||||||||||||||| |||| ||||||||||||||||||||||||||||  |||    
T  25185421 ggttttgagtca----------------ta--tagttaatttgtcgtaaagattgaatagtgattaagaataaagggaggtaaactactcatatagggca 25185502  T
Q  201 atagcgaattcatcagcttaa 221  Q
    |||||| ||||| ||||||||    
T  25185503 atagcggattcaccagcttaa 25185523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 2500192 - 2500049
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||||||||   ||||||||| |||||      |||||||||||||||||||| |||||||| ||||||| ||||||||||| |||||    
T  2500192 ataggaaattgaggattatgacttatgaattaacgttctcaccatgcttccgcggttattcaatcagtttaagaaattaaaaggttataacttatgaaag 2500093  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgt 144  Q
     ||||||||||||||||||||||||||| |||||||||||||||    
T  2500092 ggttttgagtcaagagattgatcaaaaccacttagttaatttgt 2500049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 46 - 140
Target Start/End: Original strand, 9690742 - 9690836
Alignment:
Q  46 gcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  9690742 gcttccacggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaat 9690836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 26337917 - 26338056
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||  ||||||   ||||||||| |||||   ||  ||||| ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  26337917 ataggaaattgagagttatgacttatgaattaacgttctgacataacttccacggttattcaatcggcttaagagattaaaaggttataacttaggaaag 26338016  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
     ||||||||||||||||||||||||||| |||||||||||    
T  26338017 ggttttgagtcaagagattgatcaaaaccacttagttaat 26338056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 56 - 140
Target Start/End: Complemental strand, 35432619 - 35432535
Alignment:
Q  56 ttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
    ||||||||||| ||||||||||||| | |||||||| | ||||||  |||||||||||||||||||||||||||| | |||||||    
T  35432619 ttattcaatcgatttaagagattaagaggttataaccttggaaaggattttgagtcaagagattgatcaaaactaataagttaat 35432535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 1810592 - 1810528
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatc 65  Q
    ||||||||||||||||||||| | ||||||||| ||| | |||||||||||||||||||||||||    
T  1810592 ataggaaattgaggattatgacatatgaattaacgttttgttatcgcttccgcggttattcaatc 1810528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 36335226 - 36335165
Alignment:
Q  69 ttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaacta 130  Q
    |||||||||||| |  |||||||||||||||| |||||||||||||||||| ||||||||||    
T  36335226 ttaagagattaagagattataacttaggaaagggttttgagtcaagagatttatcaaaacta 36335165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 92 - 140
Target Start/End: Complemental strand, 1810525 - 1810477
Alignment:
Q  92 ttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  1810525 ttaggaaagggttttgagtcaagagattgatcaaaactatttagttaat 1810477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 130
Target Start/End: Original strand, 36330741 - 36330787
Alignment:
Q  84 gttataacttaggaaagtgttttgagtcaagagattgatcaaaacta 130  Q
    ||||||||||||||||  |||||||||||| ||||||||||||||||    
T  36330741 gttataacttaggaaatagttttgagtcaaaagattgatcaaaacta 36330787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 33921076 - 33921153
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagatt 78  Q
    |||||||||||||  ||||||   ||||||||| |||||   || |||||| ||||||||||||||||||||||||||    
T  33921076 ataggaaattgagagttatgacttatgaattaacgttctgacatagcttccacggttattcaatcggtttaagagatt 33921153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 169; Significance: 9e-91; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 18859713 - 18859937
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||| ||||||||||| ||||  |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18859713 atagaaaattgaggatcatgactcatgaattaacgatcttttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaag 18859812  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||| |||||||||||||    
T  18859813 ggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaagatggaatagtaattaggaataaaaggaggtaaacttctcatataaagca 18859912  T
Q  201 atagcgaattcatcagcttaatcat 225  Q
    |||| ||||||||| ||||||||||    
T  18859913 atagggaattcatcggcttaatcat 18859937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 63 - 225
Target Start/End: Original strand, 17670309 - 17670471
Alignment:
Q  63 atcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagta 162  Q
    |||||||||||| |||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  17670309 atcggtttaagatattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaactacttaattaatttgtcgtaaagattgaatagta 17670408  T
Q  163 attaggaataaagggaggtaaactactcatataaagcaatagcgaattcatcagcttaatcat 225  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||||| || |||||||    
T  17670409 attagtaataaagggaggtaaactactcatataaagcaatagcggattcatcggcataatcat 17670471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 3719680 - 3719456
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  3719680 ataggaaattgagaatcatgacatatgaattaacgttcttttatcgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaag 3719581  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| | ||||||||||||||||| | || |||||||||| ||||||| |||||||||||||| ||  ||||||||| || |||||||||| | ||    
T  3719580 ggttttgattgaagagattgatcaaaaccaatttgttaatttgtcgtaaagaatgaatagtaattagtaaataagggaggt-aattactcatatagaaca 3719482  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| |||||||||||    
T  3719481 ataggggattcatcggcttaatcatt 3719456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 14701840 - 14702064
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||| || ||   |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14701840 ataggaaattgagaatcatgacatatgaattaacgtcctaacatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaag 14701939  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| ||||||||||||||||||| | || |||||||||| ||||||| |||||||||||||| ||  ||||||||| ||||||||||| | | ||    
T  14701940 ggttttgattcaagagattgatcaaaaccaatttgttaatttgtcgtaaagaatgaatagtaattagtaaataagggaggt-aactactcatacagaaca 14702038  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| |||||||||||    
T  14702039 ataggggattcatcggcttaatcatt 14702064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 11702771 - 11702613
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||| |||||| | |||||||||  ||||   ||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||    
T  11702771 ataggaaattgagggttatgacatatgaattaacattctgacatcgcttccgcggttattcaatcagtttaagagattaaaaggttttaacttaggaaag 11702672  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaata 159  Q
     ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  11702671 ggttttgagtcaagagattgatcaaaactaattagttaatttgtcgtaaagattgaata 11702613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 49636707 - 49636484
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||| ||| ||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  49636707 ataggaaattgagaatcatgacatatgaattaacgttattt-atcgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaag 49636609  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| ||||||||||||||||||| | || ||||||| || ||||||| ||||||||||| || ||  ||||||||| || |||||||||| | ||    
T  49636608 ggttttgattcaagagattgatcaaaaccaatttgttaattcgtcgtaaagaatgaatagtaataagtaaataagggaggt-aattactcatatagaaca 49636510  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
     ||| | ||||||| |||||||||||    
T  49636509 gtaggggattcatcggcttaatcatt 49636484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 3734248 - 3734471
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||| ||| ||| |||||||||||  |||||||||| |||||||||||||||| |||||||||||||||||    
T  3734248 ataggaaattgagaatcatgacatatgaattaacgttattt-atcgcttccgcaattattcaatcagtttaagagattaaaaggttataacttaggaaag 3734346  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| ||||||||||||||||||| | || ||||||| || ||||||| ||||||||||| || ||  ||||||||| || |||||||||| | ||    
T  3734347 ggttttgattcaagagattgatcaaaaccaatttgttaattcgtcgtaaagaatgaatagtaataagtaaataagggaggt-aattactcatatagaaca 3734445  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
     ||| | ||||||| |||||||||||    
T  3734446 gtaggggattcatcggcttaatcatt 3734471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 49640000 - 49639777
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||| ||| ||| |||||||||||  |||||||||| |||||||||||||||| |||||||||||||||||    
T  49640000 ataggaaattgagaatcatgacatatgaattaacgttattt-atcgcttccgcaattattcaatcagtttaagagattaaaaggttataacttaggaaag 49639902  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| ||||||||||||||||||| | || ||||||| || ||||||| ||||||||||| || ||  ||||||||| || |||||||||| | ||    
T  49639901 ggttttgattcaagagattgatcaaaaccaatttgttaattcgtcgtaaagaatgaatagtaataagtaaataagggaggt-aattactcatatagaaca 49639803  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
     ||| | ||||||| |||||||||||    
T  49639802 gtaggggattcatcggcttaatcatt 49639777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 46 - 226
Target Start/End: Original strand, 23653254 - 23653434
Alignment:
Q  46 gcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaatttgtt 145  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||| |||||||||||||     
T  23653254 gcttccacggttattcaatcggtttaagagattaaaatgttataacttaggaaagggttttgagtcaaaaaattgatcaaaactaattagttaatttgtc 23653353  T
Q  146 gtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagcaatagcgaattcatcagcttaatcatt 226  Q
     ||||||  |||||   |||  |||||||| ||||||||||| ||| |||  ||||||||| |||| |||| |||||||||    
T  23653354 ttaaagaaagaataagcattgagaataaagagaggtaaactattcacatagggcaatagcggattcttcagtttaatcatt 23653434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 43 - 159
Target Start/End: Original strand, 10247792 - 10247908
Alignment:
Q  43 atcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaattt 142  Q
    ||||||||||||||||||||| | |||||| ||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||||    
T  10247792 atcgcttccgcggttattcaaccagtttaaaagattaaaaggttataacttaggaaatggttttgagtcaagagattgatcaaaactaattagttaattt 10247891  T
Q  143 gttgtaaagattgaata 159  Q
    || ||||||||||||||    
T  10247892 gtcgtaaagattgaata 10247908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 13979068 - 13979207
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||||||||   ||||||||| |||||      ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13979068 ataggaaattgaggattatgacttatgaattaacgttctcaccatgcttctgcggttattcaatcggtttaagagattaaaaggttataacttaggaaag 13979167  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
     ||||||||||||||||||||||||||| |||||||||||    
T  13979168 ggttttgagtcaagagattgatcaaaaccacttagttaat 13979207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 15851107 - 15851257
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||||||||   ||||||||| |||||      ||||||||| |||||||||| |||||||||||||||| |||||||||||||||||    
T  15851107 ataggaaattgaggattatgacttatgaattaacgttctcaccatgcttccgcgattattcaatctgtttaagagattaaaaggttataacttaggaaag 15851206  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaag 151  Q
     |||||||||||| |||||||||||||| ||||||||||||||| ||||||    
T  15851207 ggttttgagtcaaaagattgatcaaaaccacttagttaatttgtcgtaaag 15851257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 46 - 140
Target Start/End: Original strand, 19928859 - 19928953
Alignment:
Q  46 gcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  19928859 gcttccgcggttattcaatcggtttaagatattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaat 19928953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 46 - 140
Target Start/End: Complemental strand, 26703630 - 26703536
Alignment:
Q  46 gcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  26703630 gcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaagagttttgagtcaagagattgatcaaaaccacttagttaat 26703536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 159
Target Start/End: Original strand, 10385890 - 10386026
Alignment:
Q  16 ttatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaaga 115  Q
    |||||| | ||||||||| |||||   |||||||| ||||||||||||||||||||||||||||||| |||||       ||||| ||||||||||||||    
T  10385890 ttatgacatatgaattaacgttctgacatcgcttctgcggttattcaatcggtttaagagattaaaaggttat-------gaaagggttttgagtcaaga 10385982  T
Q  116 gattgatcaaaactacttagttaatttgttgtaaagattgaata 159  Q
    ||||||||||||||| |||||||||||||  || ||||||||||    
T  10385983 gattgatcaaaactaattagttaatttgtcatagagattgaata 10386026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 33400510 - 33400392
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||| | ||||||  ||||||||||  ||||   |||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||    
T  33400510 ataggaaattgatggttatga--catgaattaacattctgacatcgcttccgcgattattcaatcggttgaagagattaaaaggttataacttaggaaag 33400413  T
Q  101 tgttttgagtcaagagattga 121  Q
     ||||||||||||||||||||    
T  33400412 agttttgagtcaagagattga 33400392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 52 - 226
Target Start/End: Original strand, 11560799 - 11560972
Alignment:
Q  52 gcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaag 151  Q
    |||||| |||||||||||||||||||||| | ||||||||||||||||| |||||||||||| ||||||||| |||||| |||||||||||||  |||||    
T  11560799 gcggttgttcaatcggtttaagagattaataggttataacttaggaaagagttttgagtcaaaagattgatc-aaactaattagttaatttgtcttaaag 11560897  T
Q  152 attgaatagtaattaggaataaagggaggtaaactactcatataaagcaatagcgaattcatcagcttaatcatt 226  Q
    |  ||||| | |||  || | ||| ||||||||||| ||| |||   |||||||| ||||| | | |||||||||    
T  11560898 aaagaataatcattgagagtgaagagaggtaaactattcacataggacaatagcggattcaccggtttaatcatt 11560972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 55 - 125
Target Start/End: Complemental strand, 24605377 - 24605307
Alignment:
Q  55 gttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaa 125  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| | ||||| ||||||||||||||||    
T  24605377 gttattcaatcggtttaagagattaaaaggttataacctaggaaagggctttgattcaagagattgatcaa 24605307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 55 - 140
Target Start/End: Complemental strand, 7395000 - 7394916
Alignment:
Q  55 gttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
    |||| ||||||||||||||||||||||| |||||||| || || || | ||||||||||||||||||||||| ||| | |||||||    
T  7395000 gttaatcaatcggtttaagagattaaaaggttataac-taagatagggctttgagtcaagagattgatcaaagctaataagttaat 7394916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 169; Significance: 9e-91; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 5 - 225
Target Start/End: Original strand, 11056280 - 11056500
Alignment:
Q  5 gaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgtt 104  Q
    |||||||||||| ||||  |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||    
T  11056280 gaaattgaggatcatgactcatgaattaacgttcttttatcgcttccgcggttattcaatcgatttaagagattaaaaggttataacttaggaaagggtt 11056379  T
Q  105 ttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagcaatag 204  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11056380 ttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaagattgaatagtaattaggaataaagggaggtaaacttctcatataaagcaatag 11056479  T
Q  205 cgaattcatcagcttaatcat 225  Q
     | ||||||| | ||||||||    
T  11056480 gggattcatcggtttaatcat 11056500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 11059734 - 11059958
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||| ||||  |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  11059734 ataggaaattgaggatcatgactcatgaattaacgttcttttatcgcttccgcggttattcaatcgctttaagagattaaaaggttataacttaggaaag 11059833  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11059834 ggttttgagtcaagagattgatcaaatctacttagttaatttgtcgtaaagattgaatagtaattaggaataaagggaggtaaacttctcatataaagca 11059933  T
Q  201 atagcgaattcatcagcttaatcat 225  Q
    |||| | ||||||| | ||||||||    
T  11059934 ataggggattcatcggtttaatcat 11059958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 13518239 - 13518462
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||| ||||  |||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||    
T  13518239 ataggaaattgaggatcatgactcatgaattaacgttcttttatcgcttccgcggt-attcaatcggcttaagagattaaaaggttataacttaggaaag 13518337  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     | ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  13518338 gggtttgagtcaagagattgatcaaatctacttagttaatttgtcgtaaagattgaatagcaattaggaataaagggaggtaaacttctcatataaagca 13518437  T
Q  201 atagcgaattcatcagcttaatcat 225  Q
    |||| | ||||||| | ||||||||    
T  13518438 atagaggattcatcggtttaatcat 13518462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 18011885 - 18012102
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||| |||||||||||||||| ||||||||||| |||||||||||||||||||||       |||||||||||||||||||| |||||||||||||||||    
T  18011885 atagaaaattgaggattatgacacatgaattaacgttcttttatcgcttccgcgg-------atcggtttaagagattaaaaggttataacttaggaaag 18011977  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     |||| |||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  18011978 ggttt-gagtcaagagattgatcaaaactacttagttaatttatcttaaagattgaatagtaattaggaataaagggaggtaaactactcatataaacca 18012076  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||||| ||||||| |||||||||||    
T  18012077 atagcggattcatcggcttaatcatt 18012102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 29435685 - 29435909
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | |||||||||  ||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29435685 ataggaaattgagaatcatgacatatgaattaacattctgacatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 29435784  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||| ||| ||||||||||||||||||||||| | ||    
T  29435785 ggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaagaataaatagtaattagcaat-aagggaggtaaactactcatatagaaca 29435883  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| |||||||||||    
T  29435884 ataggggattcatcggcttaatcatt 29435909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 15704154 - 15703929
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | |||||||||||||||   ||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  15704154 ataggaaattgagaatcatgacatatgaattaatgttctgacatctcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaag 15704055  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     |||| |||||||||||||||||||||||||||||||||||| | ||||||| | |||||||||||  || |||||||||||||||||||||||| | ||    
T  15704054 ggtttcgagtcaagagattgatcaaaactacttagttaatttatcgtaaagaataaatagtaattactaagaaagggaggtaaactactcatatagaaca 15703955  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| |||||||||||    
T  15703954 ataggggattcatcggcttaatcatt 15703929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 15719458 - 15719233
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||| |||||   ||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  15719458 ataggaaattgagaatcatgacatatgaattaacgttctgacatcgcttccgcagttattcaatcggttgaagagattaaaaggttataacttaggaaag 15719359  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     |||| |||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||| | |||||||||||||||||| |||||||| | ||    
T  15719358 ggtttcgagtcaagagattgatcaaaactacttagttaatttgtcgtaaagaataaatagtaattcgtaataaagggaggtaaactgctcatatagaaca 15719259  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| |||||||||||    
T  15719258 ataggggattcatcggcttaatcatt 15719233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 7 - 225
Target Start/End: Original strand, 22592454 - 22592671
Alignment:
Q  7 aattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgtttt 106  Q
    ||||||| || |||| | ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||| |||||    
T  22592454 aattgagaatcatgacatatgaattaacgttcttttatcgcttccgcagttattcaatcggtttaagagattaaaaggttatgacttaggaaagggtttt 22592553  T
Q  107 gagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagcaatagcg 206  Q
    || ||||||||||||||||||| | || |||||||||| ||||||| |||||||||||||| ||  ||||||||| || |||||||||| | |||||| |    
T  22592554 gactcaagagattgatcaaaaccaatttgttaatttgtcgtaaagaatgaatagtaattagtaaataagggaggt-aattactcatatagaacaataggg 22592652  T
Q  207 aattcatcagcttaatcat 225  Q
     ||||||| ||||||||||    
T  22592653 gattcatcggcttaatcat 22592671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 1506821 - 1506663
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||| |||||| | |||||||||  ||||   |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1506821 ataggaaattgagggttatgacatatgaattaacattctgacatcgcttccgcggttattcaatcggtttaagagattaaaatgttttaacttaggaaag 1506722  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaata 159  Q
     ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  1506721 ggttttgagtcaagagattgatcaaaactaattagttaatttgtcgtaaagattgaata 1506663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 1503617 - 1503459
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||| ||||||||| |||||| | |||||||||  ||||   |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  1503617 atagaaaattgagggttatgacatatgaattaacattctgacatcgcttccgcggttattcaatcggtttaagagattaaaaggttttaacttaggaaag 1503518  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaata 159  Q
     ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  1503517 ggttttgagtcaagagattgatcaaaactaattagttaatttgtcgtaaagattgaata 1503459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 18938829 - 18939052
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||| ||| ||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  18938829 ataggaaattgagaatcatgacatatgaattaacgttattt-atcgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaag 18938927  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| ||||||||||||||||||| | || ||||||| || ||||||| ||||||||||| || ||  ||||||||| || |||||||||| | ||    
T  18938928 ggttttgattcaagagattgatcaaaaccaatttgttaattcgtcgtaaagaatgaatagtaataagtaaataagggaggt-aattactcatatagaaca 18939026  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
     ||| | ||||||| |||||||||||    
T  18939027 gtaggggattcatcggcttaatcatt 18939052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 43 - 159
Target Start/End: Original strand, 4577801 - 4577917
Alignment:
Q  43 atcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaattt 142  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  4577801 atcgcttccgcggttattcaatcggtttaagagattataaggttataacttaggaaagggttttgagtcaagagattgatcaaaactaattagttaattt 4577900  T
Q  143 gttgtaaagattgaata 159  Q
    || ||||||||||||||    
T  4577901 gtcgtaaagattgaata 4577917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 30719709 - 30719848
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||| |||||| | ||||||||| |||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30719709 ataggaaattgagggttatgacatatgaattaacgttctgacatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 30719808  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
     ||||||||||||||||||||||||| ||| | |||||||    
T  30719809 ggttttgagtcaagagattgatcaaagctaataagttaat 30719848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 40677956 - 40677817
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||||||||   ||||||||| |||||      ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  40677956 ataggaaattgaggattatgacttatgaattaacgttctcaccatgcttccgcgattattcaatcggtttaagagattaaaaggttataacttaggaaag 40677857  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
     |||||| |||||||||||||||||||| |||||||||||    
T  40677856 ggttttgtgtcaagagattgatcaaaaccacttagttaat 40677817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 38316231 - 38316081
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||||||||   ||||||||| |||||      |||||||| |||||||||||||||||||| ||||||| |||||||||||||||||    
T  38316231 ataggaaattgaggattatgacttatgaattaacgttctcaccatgcttccgcagttattcaatcggtttaagatattaaaaggttataacttaggaaag 38316132  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaag 151  Q
     ||||||||| |||||||||||||| || ||||||||||||||| ||||||    
T  38316131 ggttttgagtgaagagattgatcaataccacttagttaatttgtcgtaaag 38316081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 38326455 - 38326320
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggttta------agagattaaaatgttataactta 94  Q
    |||||||||||||| |||||| | ||||||| | |||||   |||||||||||||||||||||||||||||      ||||||||||| |||||||||||    
T  38326455 ataggaaattgagggttatgacatatgaattcacgttctgacatcgcttccgcggttattcaatcggtttaggtttaagagattaaaaggttataactta 38326356  T
Q  95 ggaaagtgttttgagtcaagagattgatcaaaacta 130  Q
    |||||| |||||||||||||||||||||||||||||    
T  38326355 ggaaagagttttgagtcaagagattgatcaaaacta 38326320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 130
Target Start/End: Original strand, 40139140 - 40139185
Alignment:
Q  85 ttataacttaggaaagtgttttgagtcaagagattgatcaaaacta 130  Q
    ||||||||||| |||| ||||||| |||||||||||||||||||||    
T  40139140 ttataacttagaaaagagttttgactcaagagattgatcaaaacta 40139185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 150
Target Start/End: Complemental strand, 32074501 - 32074436
Alignment:
Q  85 ttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaa 150  Q
    |||||| ||||||| | ||||||| |||| |||||||||||||||| |  |||||||||| |||||    
T  32074501 ttataatttaggaacgagttttgattcaaaagattgatcaaaactattgtgttaatttgtcgtaaa 32074436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 25925209 - 25925173
Alignment:
Q  106 tgagtcaagagattgatcaaaactacttagttaattt 142  Q
    ||||||||||||||||||||||||| || ||||||||    
T  25925209 tgagtcaagagattgatcaaaactattttgttaattt 25925173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 165; Significance: 2e-88; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 3827002 - 3826778
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||||||||||| ||||||||||| || |||||||| |||  |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  3827002 ataggaaattgaggattatgacacatgaattaacgtacttttatcccttttgcggttattcaatcggtttaagagattaaaagattataacttaggaaag 3826903  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||  ||||||||||||||||||||||||||||||||    
T  3826902 ggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaaaattgaatagtaattattaataaagggaggtaaactactcatataaagca 3826803  T
Q  201 atagcgaattcatcagcttaatcat 225  Q
    |||||| ||||||| ||||||||||    
T  3826802 atagcggattcatcggcttaatcat 3826778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 14966165 - 14966389
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||| ||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  14966165 ataggaaattgaggatcatgactcatgaattaacgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacctaggaaag 14966264  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     | ||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  14966265 gggtttgagtcaagagattgatcaaatctacttagttaatttgtcgtaaggattgaatagtaattagtaataaagggaggtaaactactcatataaaaca 14966364  T
Q  201 atagcgaattcatcagcttaatcat 225  Q
    |||| | ||||||| ||||||||||    
T  14966365 ataggggattcatcggcttaatcat 14966389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 28 - 225
Target Start/End: Original strand, 14969672 - 14969869
Alignment:
Q  28 aattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaa 127  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||  ||||||||||||||||||||||||     
T  14969672 aattaacgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacctatgaaaggattttgagtcaagagattgatcaaat 14969771  T
Q  128 ctacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagcaatagcgaattcatcagcttaatcat 225  Q
    |||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||| ||||||| |||||| | ||||||| ||||||||||    
T  14969772 ctacttagttaatttgttgtaaggattgaatagtaattaataataaagggaggtaaactacttatataaaacaatagggtattcatcggcttaatcat 14969869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 43 - 226
Target Start/End: Original strand, 11410741 - 11410923
Alignment:
Q  43 atcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaattt 142  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||    
T  11410741 atcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactccttagttaattt 11410840  T
Q  143 gttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagcaatagcgaattcatcagcttaatcatt 226  Q
    || ||||||| | |||||||||||| ||| ||||||||||||||||||||||||| |||||| | ||||||| |||||||||||    
T  11410841 gtcgtaaagaataaatagtaattagcaat-aagggaggtaaactactcatataaaacaataggggattcatcggcttaatcatt 11410923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 5 - 226
Target Start/End: Original strand, 2331220 - 2331441
Alignment:
Q  5 gaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgtt 104  Q
    |||||||||| ||||||   ||||||||| |||||   || |||||||| |||||||||||| ||||||||||||||| ||||||||||||||||  |||    
T  2331220 gaaattgagggttatgacctatgaattaacgttctgacatagcttccgcagttattcaatcgatttaagagattaaaaggttataacttaggaaatggtt 2331319  T
Q  105 ttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagcaatag 204  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||  ||||||||||||||| |||||||||||| ||||||||    
T  2331320 ttgagtcaagagattgatcaaaagtacttagttaatttgtcgtaaagattgaatagtaattgagaataaagggaggtagactactcatatagagcaatag 2331419  T
Q  205 cgaattcatcagcttaatcatt 226  Q
    || ||| | | |||||||||||    
T  2331420 cggattaaccggcttaatcatt 2331441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 17231790 - 17232013
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||| |||||||| || |||| | ||||||||| |||||   ||||||||||||||||||||||  |||||||||||||||| ||||| |||||||||||    
T  17231790 atagaaaattgagaatcatgacatatgaattaacgttctgacatcgcttccgcggttattcaattagtttaagagattaaaaggttatgacttaggaaag 17231889  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||||||||||||||||||||| ||||||  | |||||||||||| ||||||||||||||||||||| ||||| | ||    
T  17231890 ggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaaggataaatagtaattagtaataaagggaggtaaactacttatatagaaca 17231989  T
Q  201 atagcgaattcatcagcttaatca 224  Q
    |||| | ||||||| |||||||||    
T  17231990 ataggggattcatcggcttaatca 17232013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 22920463 - 22920687
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| ||||||| | ||||||||| |||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||    
T  22920463 ataggaaattgagaattatgacatatgaattaacgttcttttatcgcttctgcagttattcaatcggtttaagagattaaaaggttataacttaggaaag 22920562  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| |||||||||||||||| || | || ||||||| || ||||||| |||||||||||||| ||  ||||||| | || |||||||||| | ||    
T  22920563 ggttttgattcaagagattgatcaacaccaatttgttaattcgtcgtaaagaatgaatagtaattagtaaataagggagat-aattactcatatagaaca 22920661  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| |||||||||||    
T  22920662 ataggggattcatcggcttaatcatt 22920687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 5 - 159
Target Start/End: Original strand, 34502281 - 34502435
Alignment:
Q  5 gaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgtt 104  Q
    ||||||||||||||||  | ||||||||| |||||   |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||    
T  34502281 gaaattgaggattatggcatatgaattaacgttctgacatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggtt 34502380  T
Q  105 ttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaata 159  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  34502381 ttgagtcaagagattgatcaaaactaattagttaatttgtcgtaaagattgaata 34502435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 2330564 - 2330768
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||| |||||| | || |||||| |||||   || |||| ||| |||||||||||||||||| ||||||||| ||||||||||| ||||     
T  2330564 ataggaaattgagggttatgacatataaattaacgttctgacatagctttcgcagttattcaatcggtttaatagattaaaaggttataacttatgaaat 2330663  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||| |||||||||||| ||||||| |||||||||||||||| |||||||||||||| |||||  ||||||||||||||| |||||||||||| ||||    
T  2330664 ggttttcagtcaagagattaatcaaaagtacttagttaatttgtcgtaaagattgaatattaattgagaataaagggaggtagactactcatatagagca 2330763  T
Q  201 atagc 205  Q
    |||||    
T  2330764 atagc 2330768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 17696524 - 17696736
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaat-gttataacttaggaaa 99  Q
    |||||||||||||| |||||| | || |||||| |||||    | |||||||||||||||||||| | || ||||||||| |  |||||||||||| |||    
T  17696524 ataggaaattgagggttatgacatataaattaacgttctgactttgcttccgcggttattcaatctgatttagagattaatagagttataacttagtaaa 17696623  T
Q  100 gtgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagc 199  Q
    | ||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||| ||||  || ||||||||||||||||| |||||||||||    
T  17696624 gggttttgagtcaagagattgatcaaagccacttagttaatttgtcgtaaagattgaatagaaattgagagtaaagggaggtaaactagtcatataaagc 17696723  T
Q  200 aatagcgaattca 212  Q
    ||||||| |||||    
T  17696724 aatagcggattca 17696736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 5618398 - 5618244
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||| ||||||||  |||||||| |||||   |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  5618398 ataggaaattgagg-ttatgata--tgaattaacgttctgacatcgcttctgcggttattcaatcggtttaagagattaaaaggttataacttaggaaag 5618302  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaat 158  Q
     ||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  5618301 ggttttgagtgaagagattgatcaaaactaattagttaatttgtcgtaaagattgaat 5618244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 28117774 - 28117913
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||| |||||| | ||||||||| |||||   |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28117774 ataggaaattgagggttatgacatatgaattaacgttctgacatcgcttctgcggttattcaatcggtttaagagattaaaaggttataacttaggaaag 28117873  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
     ||||||||||||||||||||||||| ||| | |||||||    
T  28117874 ggttttgagtcaagagattgatcaaagctaataagttaat 28117913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 88 - 225
Target Start/End: Complemental strand, 13095816 - 13095679
Alignment:
Q  88 taacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaacta 187  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||| ||||| | | |||||||||||| |||||||||||||||||||    
T  13095816 taacttaggaaagggttttgagttaagagattgatcaaaactatttagttaatttgtcgtaaaaaataaatagtaattagtaataaagggaggtaaacta 13095717  T
Q  188 ctcatataaagcaatagcgaattcatcagcttaatcat 225  Q
    |||||||| | |||||| | ||||||| ||||||||||    
T  13095716 ctcatatagaacaataggggattcatcggcttaatcat 13095679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 48 - 151
Target Start/End: Complemental strand, 35027270 - 35027167
Alignment:
Q  48 ttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaatttgttgt 147  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||| ||    
T  35027270 ttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaatctgtcgt 35027171  T
Q  148 aaag 151  Q
    ||||    
T  35027170 aaag 35027167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 9313969 - 9313830
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||| |||||| | ||||||||| ||||    ||||||||||| |||||||||||||||||||| ||||||| |||||||||||||||||    
T  9313969 ataggaaattgagggttatgacatatgaattaacgttccgacatcgcttccgcagttattcaatcggtttaagatattaaaaggttataacttaggaaag 9313870  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
     ||||||||||||||||||||||||| ||| | |||||||    
T  9313869 ggttttgagtcaagagattgatcaaagctaataagttaat 9313830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 28894665 - 28894526
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||||||||   ||||||||| |||||      ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  28894665 ataggaaattgaggattatgacttatgaattaacgttctcaccatgcttctgcggttattcaattggtttaagagattaaaatgttataacttaggaaag 28894566  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
     ||||||||||||||||||||||||||| || ||||||||    
T  28894565 ggttttgagtcaagagattgatcaaaaccacatagttaat 28894526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 52 - 187
Target Start/End: Original strand, 31123418 - 31123553
Alignment:
Q  52 gcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaag 151  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||  |||||    
T  31123418 gcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagttaagagattgatcaaaactaattagttaatttgtcttaaag 31123517  T
Q  152 attgaatagtaattaggaataaagggaggtaaacta 187  Q
    |  ||||| | |||  || ||||| |||||||||||    
T  31123518 aaagaataatcattgagattaaagagaggtaaacta 31123553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 46 - 140
Target Start/End: Complemental strand, 15579054 - 15578960
Alignment:
Q  46 gcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
    ||||||| |||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  15579054 gcttccgtggttattcaatcggtttaagagattaaaagattataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaat 15578960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 46 - 140
Target Start/End: Complemental strand, 33679328 - 33679234
Alignment:
Q  46 gcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| |||||||||||    
T  33679328 gcttccgcagttattcaatcggtttaagagattaaaatgttataacttacgaaagggttttgagttaagagattgatcaaaaccacttagttaat 33679234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 12746740 - 12746882
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaa---gagattaaaatgttataacttagga 97  Q
    |||||||||||||  ||||||   ||||||||| |||||   || |||||| ||||||||||||||||||||   |||||||||| ||||||||||||||    
T  12746740 ataggaaattgagagttatgacttatgaattaacgttctgacatagcttccacggttattcaatcggtttaataagagattaaaaggttataacttagga 12746839  T
Q  98 aagtgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
    ||| ||||||||||||||||||||||||||| |||||||||||    
T  12746840 aagggttttgagtcaagagattgatcaaaaccacttagttaat 12746882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 7560314 - 7560232
Alignment:
Q  46 gcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaac 128  Q
    |||||||| |||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||    
T  7560314 gcttccgcagttattcaatcggtttaagagattaaaaggttatagcttaggaaagagttttgagtcaagagattgatcaaaac 7560232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 68 - 144
Target Start/End: Complemental strand, 7560216 - 7560140
Alignment:
Q  68 tttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaatttgt 144  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  7560216 tttaagagattaaaaggttataacttaggaaagagttttgagtcaagagattgatcaaaactaattagttaatttgt 7560140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 134
Target Start/End: Complemental strand, 11296319 - 11296189
Alignment:
Q  4 ggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgt 103  Q
    ||||||||| ||||||||   |||||||||||||||      ||||||||||||||||||||||||| ||||||||||||||||||| ||  ||||| ||    
T  11296319 ggaaattgaagattatgacttatgaattaatgttctcaccatgcttccgcggttattcaatcggttttagagattaaaatgttataatttgagaaagggt 11296220  T
Q  104 tttgagtcaagagattgatcaaaactactta 134  Q
    ||||| ||||||||||||||||||| |||||    
T  11296219 tttgaatcaagagattgatcaaaaccactta 11296189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 14969602 - 14969673
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaa 72  Q
    |||||||||||||||| ||||  |||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14969602 ataggaaattgaggatcatgactcatgaattaacgttcttttatcgcttccgcggttattcaatcggtttaa 14969673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 20189560 - 20189489
Alignment:
Q  55 gttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaa 126  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||| |||||||||||    
T  20189560 gttattcaatcggtttaagagattaaaaggttataacctaggaaagtgatttgagtcaagtgattgatcaaa 20189489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 22146431 - 22146502
Alignment:
Q  55 gttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaa 126  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||| |||||||||||    
T  22146431 gttattcaatcggtttaagagattaaaaggttataacctaggaaagtgatttgagtcaagtgattgatcaaa 22146502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 55 - 126
Target Start/End: Original strand, 16731362 - 16731433
Alignment:
Q  55 gttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaa 126  Q
    ||||||||||||| |||||||||||||| |||||||| ||||||||   |||||||||||||||||||||||    
T  16731362 gttattcaatcggcttaagagattaaaaggttataacctaggaaaggactttgagtcaagagattgatcaaa 16731433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 140
Target Start/End: Original strand, 6856608 - 6856656
Alignment:
Q  92 ttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
    ||||||||| ||||||| |||||||||||||||||| || | |||||||    
T  6856608 ttaggaaagggttttgaatcaagagattgatcaaaattattaagttaat 6856656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 157; Significance: 1e-83; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 28918309 - 28918533
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||| ||||  |||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  28918309 ataggaaattgaggatcatgactcatgaattaacgttcttgtatcgtttccgcggttattcaatcggtttaagagattaaaagattataacttaggaaag 28918408  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  28918409 ggttttgagtcaagagattgatcaaaactacttagttaatttgtcataaagattgaatagtaattagaaataaagggaggtaaactactcatataaaaca 28918508  T
Q  201 atagcgaattcatcagcttaatcat 225  Q
    |||| | ||||||| |||| |||||    
T  28918509 ataggggattcatcggcttgatcat 28918533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 17902971 - 17902747
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || ||||  |||||||||| || ||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17902971 ataggaaattgagaatcatgactcatgaattaacgt-ctttattcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaag 17902873  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||| ||||||| ||||||||||||||||||| | ||    
T  17902872 ggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaagaataaatagtaattagtaataaagagaggtaaactactcatatagaaca 17902773  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| |||||||||||    
T  17902772 ataggggattcatcggcttaatcatt 17902747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 37641802 - 37642026
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||| ||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||    
T  37641802 ataggaaattgaggatcatgactcatgaattaacgttcttttatcgcttccgcggttattcaatcggtttaagagattacaaggttataacctaggaaag 37641901  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||| ||||||||||||||||| ||||||| | |||| ||||||| ||  ||||||||| ||||||||||||| | ||    
T  37641902 ggttttgagtcaagagattgatcaaatctacttagttaatttgtcgtaaagactaaataataattagtaaataagggaggt-aactactcatatagaaca 37642000  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| |||||||||||    
T  37642001 ataggggattcatcggcttaatcatt 37642026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 49719789 - 49720013
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | |||||||||  ||||   ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  49719789 ataggaaattgagaatcatgacatatgaattaacattctgacatcgcttccgcggttattcaatcggtttaagagattaaaagattataacttaggaaag 49719888  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||| ||| ||||||||||||||||||||||| | ||    
T  49719889 ggttttgagtcaagagattgatcaaaactacttagttaatttgtcgtaaagaataaatagtaattagcaat-aagggaggtaaactactcatatagaaca 49719987  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| |||||||||||    
T  49719988 ataggggattcatcggcttaatcatt 49720013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 49716307 - 49716531
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | |||||||||  ||||   ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  49716307 ataggaaattgagaatcatgacatatgaattaacattctgacatcgcttccgcggttattcaatcggtttaagagattaaaagattataacttaggaaag 49716406  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||||||||||||||||||||||||||||||||||||| | ||||||| | |||||||||||| ||| ||||||||||||||||||||||| | ||    
T  49716407 ggttttgagtcaagagattgatcaaaactacttagttaatttatcgtaaagaataaatagtaattagcaat-aagggaggtaaactactcatatagaaca 49716505  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| |||||||||||    
T  49716506 ataggggattcatcggcttaatcatt 49716531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 20981294 - 20981518
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||| |||||  ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  20981294 ataggaaattgagaatcatgacatatgaattaacgttctgatattgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaag 20981393  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
      |||||| ||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||  ||  ||||||||| ||||||||||||| | ||    
T  20981394 gattttgattcaagagattgatcaaaactacttagttaatttgtcgtaaagactaaatagtaattactaaataagggaggt-aactactcatatagaaca 20981492  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| |||||||||||    
T  20981493 ataggggattcatcggcttaatcatt 20981518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 24200428 - 24200204
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||  ||||||||||||||||    
T  24200428 ataggaaattgagaatcatgacatatgaattaacgttcttttatcgcttccgcagttattcaatcggtttaagagataaaaagattataacttaggaaag 24200329  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| ||||||||||||||||||| | || ||||||| || ||||||  |||||||||||||| ||  ||||||||| || |||||||||| | ||    
T  24200328 ggttttgattcaagagattgatcaaaaccaatttgttaattcgtcgtaaaggatgaatagtaattagtaaataagggaggt-aattactcatatagaaca 24200230  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| |||||||||||    
T  24200229 ataggggattcatcggcttaatcatt 24200204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 20964391 - 20964614
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||| |||||  ||| |||||||| |||||||||| ||||||||||||||||| |||||||||||||||||    
T  20964391 ataggaaattgagaatcatgacatatgaattaacgttctgatattgcttccgcagttattcaattggtttaagagattaaaaggttataacttaggaaag 20964490  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     | ||||| |||||||||||||||||||||||||||||||||||  || ||| | ||||||| |||| ||  ||||||||| ||||||||||||| | ||    
T  20964491 -ggtttgattcaagagattgatcaaaactacttagttaatttgtcatagagactaaatagtagttagtaaataagggaggt-aactactcatatagaaca 20964588  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| |  ||||||||||||||||||    
T  20964589 atagggggttcatcagcttaatcatt 20964614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 16839117 - 16838894
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||| ||| ||| || |||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  16839117 ataggaaattgagaatcatgacatatgaattaacgttattt-attgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaag 16839019  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| ||||||||||||||||||| | || ||||||| || ||||||| ||||||||||| || ||  ||||||||| || |||||||||| | ||    
T  16839018 ggttttgattcaagagattgatcaaaaccaatttgttaattcgtcgtaaagaatgaatagtaataagtaaataagggaggt-aattactcatatagaaca 16838920  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
     ||| | ||||||| |||||||||||    
T  16838919 gtaggggattcatcggcttaatcatt 16838894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 16849047 - 16848824
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||| ||| ||| || |||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  16849047 ataggaaattgagaatcatgacatatgaattaacgttattt-attgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaag 16848949  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| ||||||||||||||||||| | || ||||||| || ||||||| ||||||||||| || ||  ||||||||| || |||||||||| | ||    
T  16848948 ggttttgattcaagagattgatcaaaaccaatttgttaattcgtcgtaaagaatgaatagtaataagtaaataagggaggt-aattactcatatagaaca 16848850  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
     ||| | ||||||| |||||||||||    
T  16848849 gtaggggattcatcggcttaatcatt 16848824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 18392327 - 18392476
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||||||||   ||||||||| |||||      |||||||||||||||||||||||||||||| |||||| |||||||||||||||||    
T  18392327 ataggaaattgaggattatgacttatgaattaacgttctcaccatgcttccgcggttattcaatcggtttaagag-ttaaaaggttataacttaggaaag 18392425  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaag 151  Q
     ||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  18392426 ggttttgagtcaagagattgatcaaaaccacttagttaatttgtcgtaaag 18392476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 34552868 - 34552718
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||||||||   ||||||||| |||||      | ||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  34552868 ataggaaattgaggattatgacttatgaattaacgttctcaccatgattccgcggttattcaatcggtttaagagattaaaaggttataactttggaaag 34552769  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaag 151  Q
     ||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  34552768 ggttttgagtcaagagattgatcaaaaccacttagttaatttgtcgtaaag 34552718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 46 - 151
Target Start/End: Original strand, 6205859 - 6205965
Alignment:
Q  46 gcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtg-ttttgagtcaagagattgatcaaaactacttagttaatttgt 144  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||  |||||||||||||||    
T  6205859 gcttccgcggttattcaatcggtttaagagattaaaaagttataacttaggaaagggtttttgagtcaagagattgatcaaaatcacttagttaatttgt 6205958  T
Q  145 tgtaaag 151  Q
     ||||||    
T  6205959 cgtaaag 6205965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 46 - 140
Target Start/End: Original strand, 33898305 - 33898399
Alignment:
Q  46 gcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  33898305 gcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaat 33898399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 23441468 - 23441329
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||||||||||   ||||||||| |||||      ||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||    
T  23441468 ataggaaattgaggattatgacttatgaattaacgttctcaccatgcttccgcgattattcattcggtttaagagattaaaaggttataacttaggaaag 23441369  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
     |||||| |||||||||||||||||||| |||||||||||    
T  23441368 ggttttgtgtcaagagattgatcaaaaccacttagttaat 23441329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 46 - 140
Target Start/End: Complemental strand, 50197098 - 50197004
Alignment:
Q  46 gcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||    
T  50197098 gcttccacggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccatttagttaat 50197004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 48 - 140
Target Start/End: Complemental strand, 3087862 - 3087770
Alignment:
Q  48 ttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||| |||| |||||||||| |||||||||||||||| |||||||||||    
T  3087862 ttccgcagttattcaatcggtttaagagattaaaaggttataacttagtaaagagttttgagtcgagagattgatcaaaaccacttagttaat 3087770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 92 - 141
Target Start/End: Complemental strand, 5317941 - 5317892
Alignment:
Q  92 ttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaatt 141  Q
    ||||||||  ||||||| ||||||||||||||||||||| || |||||||    
T  5317941 ttaggaaaaagttttgattcaagagattgatcaaaactattttgttaatt 5317892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 155; Significance: 2e-82; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 43 - 225
Target Start/End: Original strand, 2430 - 2612
Alignment:
Q  43 atcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaattt 142  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  2430 atcgcttccgcgattattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaactacttagttaattt 2529  T
Q  143 gttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagcaatagcgaattcatcagcttaatcat 225  Q
    || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  2530 gtcgtaaagattgaatagtaattagtaataaagggaggtaaactactcatataaagcaatagcggattcatcggcttaatcat 2612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 6220 - 6445
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | || |||||| ||| |   |||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||    
T  6220 ataggaaattgagaatcatgacatataaattaacgttttgacatcgcttccgcgattatttaatcggtttaagagattaaaaggttataacttaggaaag 6319  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
      |||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6320 gattttgagtcaagagattgatcaaaactacttaattaatttgtcgtaaaggttgaatagtaattagtaataaagggaggtaaactactcatataaagca 6419  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||||| ||||||| |||||||||||    
T  6420 atagcggattcatcggcttaatcatt 6445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 53066 - 52841
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | |||||||||||||||   ||| ||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  53066 ataggaaattgagaatcatgacatatgaattaatgttctgacatctcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaag 52967  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     |||| |||||||||||||||||||||||||||||||||||| | ||||||| | |||||||||||  || |||||||||||||||||||||||| | ||    
T  52966 ggtttcgagtcaagagattgatcaaaactacttagttaatttatcgtaaagaataaatagtaattactaagaaagggaggtaaactactcatatagaaca 52867  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| |||||||||||    
T  52866 ataggggattcatcggcttaatcatt 52841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 68015 - 67790
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | ||||||||| |||||   ||||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||    
T  68015 ataggaaattgagaatcatgacatatgaattaacgttctgacatcgcttccgcagttattcaatcggttgaagagattaaaaggttataacttaggaaag 67916  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     |||| |||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||| | |||||||||||||||||| |||||||| | ||    
T  67915 ggtttcgagtcaagagattgatcaaaactacttagttaatttgtcgtaaagaataaatagtaattcgtaataaagggaggtaaactgctcatatagaaca 67816  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| |||||||||||    
T  67815 ataggggattcatcggcttaatcatt 67790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 107; Significance: 9e-54; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 27063 - 26838
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagatt-aaaatgttataacttaggaaa 99  Q
    ||||||||||||| || |||| | ||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||| ||||| ||||||||||    
T  27063 ataggaaattgagaatcatgacatatgaattaacgttcttttatcgcttccgcagttattcaatcggtttaagagattaaaaaggttatgacttaggaaa 26964  T
Q  100 gtgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagc 199  Q
    | ||||||| ||||||||||||||||||| | || |||||||||| ||||||| |||||||||||||| ||  ||||||||| || |||||||||| | |    
T  26963 gggttttgactcaagagattgatcaaaaccaatttgttaatttgtcgtaaagaatgaatagtaattagtaaataagggaggt-aattactcatatagaac 26865  T
Q  200 aatagcgaattcatcagcttaatcatt 226  Q
    ||||    ||||||| |||||||||||    
T  26864 aatatgagattcatcggcttaatcatt 26838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 27296 - 27520
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||  || |||| | | ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||     
T  27296 ataggaaattgaaaatcatgacataggaattaacgttcttttatcgcttccgcagttattcaatcggtttaagagattaaaaggttataacctaggaaaa 27395  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| |||||||||||| |||||| |||| ||||||| || ||||||| ||||||||||| || ||  ||||||||| || |||||||||| | ||    
T  27396 ggttttgattcaagagattgaacaaaaccactttgttaattcgtcgtaaagaatgaatagtaataagtaaataagggaggt-aattactcatatagaaca 27494  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | |||||||||||||||||||    
T  27495 ataggggattcatcagcttaatcatt 27520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 103; Significance: 2e-51; HSPs: 3)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 13541 - 13698
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||| |||||| | ||||||||| |||||   |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13541 ataggaaattgagggttatgagatatgaattaacgttctgacatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaag 13640  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaata 159  Q
     |||||||||||||||||||||  |||||| ||||||||||||| ||||||||||||||    
T  13641 agttttgagtcaagagattgat-gaaactaattagttaatttgtcgtaaagattgaata 13698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 27557 - 27714
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||| |||||| | ||||||||| |||||   |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27557 ataggaaattgagggttatgagatatgaattaacgttctgacatcgcttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaag 27656  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaata 159  Q
     |||||||||||||||||||||  |||||| ||||||||||||| ||||||||||||||    
T  27657 agttttgagtcaagagattgat-gaaactaattagttaatttgtcgtaaagattgaata 27714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 2 - 159
Target Start/End: Original strand, 19991 - 20148
Alignment:
Q  2 taggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagt 101  Q
    ||||||||||||| |||||| | ||||||||| |||||   || ||||| |||||||||||||||||||||| |||||||| |||||||||||||||||     
T  19991 taggaaattgagggttatgacatatgaattaacgttctgacatggcttctgcggttattcaatcggtttaagcgattaaaaggttataacttaggaaaga 20090  T
Q  102 gttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaata 159  Q
    ||||||||||||||||||||||||||||| || |||||||||| ||||||||||||||    
T  20091 gttttgagtcaagagattgatcaaaactaatttgttaatttgtcgtaaagattgaata 20148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 43 - 226
Target Start/End: Complemental strand, 28801 - 28619
Alignment:
Q  43 atcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaattt 142  Q
    ||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||| ||||||| |||||||||| ||||||| || || ||||||||    
T  28801 atcgcttccgcggttattcaatctgtttaagacattaaaaggttataacttaggaaagggttttgattcaagagatttatcaaaattaatttgttaattt 28702  T
Q  143 gttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagcaatagcgaattcatcagcttaatcatt 226  Q
    || ||||||| |||||||||||||| ||  ||||||||| ||||||||||||| | || ||| | ||||||| |||||||||||    
T  28701 gtcgtaaagaatgaatagtaattagtaaataagggaggt-aactactcatatagaacagtaggggattcatcggcttaatcatt 28619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 7172 - 7320
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||| |||||| | ||||||||| |||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  7172 ataggaaattgagggttatgacatatgaattaacgttctgacatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaaa 7271  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaa 149  Q
     ||||||||||||||||||||||||  ||| | |||||||| |||||||    
T  7272 ggttttgagtcaagagattgatcaacgctaataagttaattcgttgtaa 7320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1048 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold1048
Description:

Target: scaffold1048; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 1336 - 1559
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| || |||| | |||||||||  ||||   ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  1336 ataggaaattgagaatcatgacatatgaattaactttctgacatcgcttccgcagttattcaatcggtttaagagattaaaaggttataacttaggaaag 1435  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaatagtaattaggaataaagggaggtaaactactcatataaagca 200  Q
     ||||||| |||||| |||||||||||| | || ||||||| || ||||||| ||||||||||  || ||  ||||||||| || |||||||||| | ||    
T  1436 ggttttgattcaagatattgatcaaaaccaatttgttaattcgtcgtaaagaatgaatagtaagaagtaaataagggaggt-aattactcatatagaaca 1534  T
Q  201 atagcgaattcatcagcttaatcatt 226  Q
    |||| | ||||||| |||||||||||    
T  1535 atag-ggattcatcggcttaatcatt 1559  T

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Target: scaffold0273 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 47 - 141
Target Start/End: Complemental strand, 19894 - 19800
Alignment:
Q  47 cttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaatt 141  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  19894 cttccgcggttattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaatt 19800  T

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Target: scaffold0083 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 29256 - 29395
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    ||||||||||||| |||||||   ||||||||| |||||   || |||||| ||||||||||||||||||| || ||||||| |||||||||||||||||    
T  29256 ataggaaattgagaattatgacttatgaattaacgttctgacatagcttccacggttattcaatcggtttaggaaattaaaaggttataacttaggaaag 29355  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
     ||||||||||||||||||||||||||| |||||||||||    
T  29356 ggttttgagtcaagagattgatcaaaaccacttagttaat 29395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 53053 - 53203
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||  ||||||   ||||||||| |||||   || |||||| | |||||||||||||||| |||||| |||| ||||||||||| ||| |    
T  53053 ataggaaattgagagttatgacttatgaattaacgttctgacatagcttccacagttattcaatcggtttgagagatgaaaaggttataacttaagaagg 53152  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaag 151  Q
     ||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  53153 ggttttgagtcaagagattgatcaaaaccacttagttaatctgtcgtaaag 53203  T

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Target: scaffold0401 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 4 - 140
Target Start/End: Original strand, 4196 - 4332
Alignment:
Q  4 ggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaagtgt 103  Q
    ||||||||||  ||||||   ||||||||| |||||   || |||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  4196 ggaaattgagagttatgacttatgaattaacgttctgacatagcttccacggttattcaatcggtttaagagattaaaaggttataacttaggaaagggt 4295  T
Q  104 tttgagtcaagagattgatcaaaactacttagttaat 140  Q
    |||||||||| |||||||||||||| |||||||||||    
T  4296 tttgagtcaaaagattgatcaaaaccacttagttaat 4332  T

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Target: scaffold0043 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 13526 - 13665
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaatgttataacttaggaaag 100  Q
    |||||||||||||  ||||||   ||||||||  |||||   || |||||| |||||||||||||||||||||||||||||| | |||||||||||||||    
T  13526 ataggaaattgagagttatgacttatgaattagcgttctgacatagcttccacggttattcaatcggtttaagagattaaaagggtataacttaggaaag 13625  T
Q  101 tgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
     |||||||||||| |||||||||||||| |||||||||||    
T  13626 ggttttgagtcaatagattgatcaaaaccacttagttaat 13665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 140
Target Start/End: Original strand, 5632 - 5670
Alignment:
Q  102 gttttgagtcaagagattgatcaaaactacttagttaat 140  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  5632 gttttgagtcaagagattgatcaaaaccacttagttaat 5670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 92423 - 92506
Alignment:
Q  57 tattcaatcggtttaagagattaaaatgttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaat 140  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  92423 tattcaatcggtttaagagattaaaaggttataacttaggaaagggttttgagtcaagagattgatcaaaaccacttagttaat 92506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 59; Significance: 4e-25; HSPs: 3)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 85 - 159
Target Start/End: Original strand, 228652 - 228726
Alignment:
Q  85 ttataacttaggaaagtgttttgagtcaagagattgatcaaaactacttagttaatttgttgtaaagattgaata 159  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  228652 ttattacttaggaaagggttttgagtcaagagattgatcaaaactaattagttaatttgtcgtaaagattgaata 228726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 227282 - 227363
Alignment:
Q  1 ataggaaattgaggattatgatacatgaattaatgttcttttatcgcttccgcggttattcaatcggtttaagagattaaaa 82  Q
    |||||||||||||| || ||| | ||||||||| |||||   ||||||| |||||||| ||||||||||||||| |||||||    
T  227282 ataggaaattgagggttgtgacatatgaattaacgttctgacatcgctttcgcggttactcaatcggtttaagatattaaaa 227363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 223760 - 223800
Alignment:
Q  119 tgatcaaaactacttagttaatttgttgtaaagattgaata 159  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  223760 tgatcaaaactaattagttaatttgtcgtaaagattgaata 223800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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