View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3488_high_21 (Length: 336)
Name: NF3488_high_21
Description: NF3488
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3488_high_21 |
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Alignment Details
Target: chr5 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 52 - 325
Target Start/End: Original strand, 14504924 - 14505197
Alignment:
| Q |
52 |
tagtgaattttgaagacaattgtggaattaatcaattgtcaataggtaaagagagcatgcgtgaaggctgaagggtggataagcctattgtgggaaagtg |
151 |
Q |
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| T |
14504924 |
tagtgaattttgaagacaattgtggaattaatcaattgtcaataggtaaagagtgcatgcgtgaaggctgaagggtggataagcctattgtgggaaagtg |
14505023 |
T |
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| Q |
152 |
cctctatttaatgcatagttgtggaaattaattaaaggcaaaatttagatgcattttcttgtataactgcggaatatagacatgcatgttacagctgaat |
251 |
Q |
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| T |
14505024 |
cctctatttaatgcatagttgtggaaattaattaaaggcaatatttagatgcattttcttgtataactgcggaatatggacatgcatgttacagctgaat |
14505123 |
T |
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| Q |
252 |
aggtttccatatgcatgattgattgcacattttgtcagagaagaacgtgggtctttgtttattacaaatgatga |
325 |
Q |
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| T |
14505124 |
aggtttctatatgcatgattgattacacattttgtcagagaagaacgtgggtctttgtttattacaaatgatga |
14505197 |
T |
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