View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3488_low_32 (Length: 242)
Name: NF3488_low_32
Description: NF3488
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3488_low_32 |
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Alignment Details
Target: chr1 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 148 - 223
Target Start/End: Original strand, 1117960 - 1118035
Alignment:
| Q |
148 |
tctctctctcattcaagcagttggtttactcatcatccttccaaaccttcaggtaacgtaacaccaccgttccact |
223 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1117960 |
tctctctctcattcaagcagttagtttactcatcatccttccaaaccttcaggtaacgtaacaccaccgttccact |
1118035 |
T |
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