View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3489_low_20 (Length: 251)

Name: NF3489_low_20
Description: NF3489
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3489_low_20
NF3489_low_20
[»] chr4 (76 HSPs)
chr4 (43-251)||(46406007-46406215)
chr4 (6-85)||(31657654-31657733)
chr4 (6-82)||(28657425-28657501)
chr4 (6-81)||(17683236-17683311)
chr4 (6-84)||(26718377-26718455)
chr4 (6-84)||(26731005-26731083)
chr4 (8-82)||(43769722-43769796)
chr4 (29-82)||(4949517-4949570)
chr4 (6-81)||(17683359-17683434)
chr4 (7-82)||(37065999-37066074)
chr4 (8-80)||(52846213-52846285)
chr4 (18-81)||(39312612-39312675)
chr4 (29-78)||(22072263-22072312)
chr4 (42-82)||(17475321-17475361)
chr4 (6-54)||(38338906-38338954)
chr4 (8-51)||(47965781-47965824)
chr4 (29-84)||(53647433-53647487)
chr4 (43-85)||(41082314-41082356)
chr4 (6-51)||(624296-624341)
chr4 (6-51)||(39344964-39345009)
chr4 (6-51)||(41486127-41486172)
chr4 (6-54)||(18882959-18883007)
chr4 (6-54)||(28458361-28458409)
chr4 (43-83)||(30079844-30079884)
chr4 (6-54)||(30170004-30170052)
chr4 (30-82)||(35500808-35500860)
chr4 (30-82)||(54036538-54036590)
chr4 (6-82)||(55601685-55601761)
chr4 (29-80)||(5386385-5386436)
chr4 (43-82)||(13086021-13086060)
chr4 (6-49)||(14010102-14010145)
chr4 (43-82)||(14010151-14010190)
chr4 (43-82)||(22819648-22819687)
chr4 (8-51)||(22819691-22819734)
chr4 (43-82)||(23822278-23822317)
chr4 (8-80)||(45143657-45143731)
chr4 (8-80)||(45152426-45152500)
chr4 (43-82)||(54669616-54669655)
chr4 (45-83)||(31076052-31076090)
chr4 (29-83)||(32621636-32621690)
chr4 (43-81)||(33860647-33860685)
chr4 (43-81)||(47099022-47099060)
chr4 (43-81)||(51741357-51741395)
chr4 (43-81)||(51887663-51887701)
chr4 (43-84)||(624345-624386)
chr4 (43-80)||(2401611-2401648)
chr4 (43-84)||(9362711-9362752)
chr4 (6-82)||(12138863-12138940)
chr4 (40-81)||(12799727-12799768)
chr4 (6-51)||(13086064-13086109)
chr4 (18-84)||(13104377-13104439)
chr4 (44-81)||(14451393-14451430)
chr4 (6-51)||(14451435-14451480)
chr4 (6-51)||(21260340-21260385)
chr4 (6-51)||(21617225-21617270)
chr4 (14-54)||(26724961-26725002)
chr4 (5-54)||(27408192-27408241)
chr4 (6-54)||(29175265-29175314)
chr4 (6-51)||(30079888-30079933)
chr4 (29-86)||(30973592-30973649)
chr4 (6-51)||(47099064-47099109)
chr4 (29-78)||(48326555-48326604)
chr4 (30-82)||(5234480-5234532)
chr4 (42-82)||(9162065-9162105)
chr4 (43-83)||(14527642-14527682)
chr4 (29-81)||(30778272-30778324)
chr4 (29-81)||(32365675-32365727)
chr4 (25-53)||(34114121-34114149)
chr4 (43-83)||(36111429-36111469)
chr4 (29-81)||(37731926-37731978)
chr4 (29-81)||(39241309-39241361)
chr4 (43-83)||(39345013-39345053)
chr4 (43-87)||(45521612-45521656)
chr4 (43-83)||(47965737-47965777)
chr4 (6-54)||(51852115-51852163)
chr4 (34-78)||(54802688-54802732)
[»] chr1 (80 HSPs)
chr1 (6-82)||(44632539-44632615)
chr1 (6-81)||(18336158-18336233)
chr1 (6-82)||(48220128-48220204)
chr1 (6-82)||(50781554-50781630)
chr1 (6-81)||(32319293-32319368)
chr1 (6-80)||(19969546-19969620)
chr1 (6-82)||(8200086-8200162)
chr1 (10-86)||(49241493-49241569)
chr1 (7-82)||(33358143-33358219)
chr1 (6-81)||(36673715-36673791)
chr1 (6-80)||(50882094-50882168)
chr1 (29-81)||(16836123-16836175)
chr1 (6-78)||(36494478-36494550)
chr1 (6-84)||(48624881-48624963)
chr1 (43-82)||(1790507-1790546)
chr1 (29-80)||(45065909-45065960)
chr1 (29-82)||(50797790-50797843)
chr1 (6-54)||(10890030-10890078)
chr1 (6-54)||(13489701-13489749)
chr1 (6-54)||(32915056-32915104)
chr1 (29-81)||(47398459-47398511)
chr1 (15-81)||(6143695-6143761)
chr1 (8-54)||(34254337-34254383)
chr1 (6-51)||(902680-902725)
chr1 (43-84)||(7128115-7128156)
chr1 (43-84)||(8411751-8411792)
chr1 (43-84)||(19442503-19442544)
chr1 (6-51)||(26837494-26837539)
chr1 (29-82)||(27687527-27687580)
chr1 (43-80)||(33054121-33054158)
chr1 (29-82)||(40596062-40596115)
chr1 (6-51)||(50328125-50328170)
chr1 (6-51)||(51191830-51191875)
chr1 (30-82)||(1690445-1690497)
chr1 (6-78)||(2211177-2211249)
chr1 (6-54)||(3226044-3226092)
chr1 (43-83)||(26585912-26585952)
chr1 (45-85)||(34254386-34254426)
chr1 (29-81)||(41507202-41507254)
chr1 (6-54)||(47214247-47214295)
chr1 (6-54)||(52362521-52362569)
chr1 (6-54)||(52714885-52714933)
chr1 (15-54)||(15705055-15705094)
chr1 (30-81)||(34818053-34818104)
chr1 (8-51)||(36577398-36577441)
chr1 (43-82)||(37588708-37588747)
chr1 (43-82)||(46082154-46082193)
chr1 (43-81)||(756856-756894)
chr1 (43-85)||(1852984-1853026)
chr1 (43-81)||(3603111-3603149)
chr1 (43-81)||(4470347-4470385)
chr1 (51-81)||(16986938-16986968)
chr1 (43-81)||(35136844-35136882)
chr1 (43-81)||(36577445-36577483)
chr1 (6-52)||(40316928-40316974)
chr1 (43-81)||(44789176-44789214)
chr1 (43-84)||(2854993-2855034)
chr1 (6-51)||(3603153-3603198)
chr1 (6-54)||(3851196-3851245)
chr1 (35-84)||(4857919-4857968)
chr1 (6-51)||(8411702-8411747)
chr1 (6-51)||(9008267-9008312)
chr1 (6-51)||(20565102-20565147)
chr1 (6-51)||(21340564-21340609)
chr1 (43-80)||(30658881-30658918)
chr1 (6-51)||(33054072-33054117)
chr1 (6-51)||(34040484-34040529)
chr1 (6-51)||(35136886-35136931)
chr1 (6-51)||(36779253-36779298)
chr1 (6-51)||(46082105-46082150)
chr1 (29-82)||(49453490-49453543)
chr1 (6-54)||(7171221-7171268)
chr1 (10-54)||(16986977-16987021)
chr1 (43-83)||(30467559-30467599)
chr1 (43-83)||(33024604-33024644)
chr1 (43-83)||(34040533-34040573)
chr1 (29-81)||(40139126-40139178)
chr1 (43-83)||(43893255-43893295)
chr1 (30-82)||(48103398-48103449)
chr1 (6-54)||(51286351-51286399)
[»] chr7 (51 HSPs)
chr7 (6-84)||(3293138-3293216)
chr7 (6-80)||(3062343-3062417)
chr7 (8-82)||(11352960-11353034)
chr7 (6-90)||(47078235-47078319)
chr7 (6-80)||(7817650-7817723)
chr7 (8-82)||(3937107-3937182)
chr7 (15-82)||(44303925-44303991)
chr7 (43-84)||(33180743-33180784)
chr7 (29-82)||(33224834-33224887)
chr7 (8-73)||(36019437-36019501)
chr7 (6-51)||(38779728-38779773)
chr7 (29-81)||(31711944-31711996)
chr7 (6-54)||(44184543-44184591)
chr7 (43-82)||(16980296-16980335)
chr7 (6-81)||(41399147-41399222)
chr7 (34-81)||(42926152-42926199)
chr7 (43-81)||(21023150-21023188)
chr7 (16-81)||(21347313-21347376)
chr7 (29-83)||(25887592-25887646)
chr7 (43-85)||(37899319-37899361)
chr7 (43-85)||(46812938-46812980)
chr7 (6-51)||(29162960-29163005)
chr7 (29-82)||(41985108-41985161)
chr7 (6-54)||(41893954-41894002)
chr7 (43-82)||(13729725-13729764)
chr7 (29-84)||(35293125-35293180)
chr7 (29-79)||(237026-237076)
chr7 (43-85)||(37899246-37899288)
chr7 (43-81)||(39331985-39332023)
chr7 (51-81)||(39823809-39823839)
chr7 (29-82)||(2469702-2469755)
chr7 (29-82)||(6822541-6822594)
chr7 (6-51)||(13162961-13163006)
chr7 (6-51)||(19786063-19786108)
chr7 (43-80)||(19786112-19786149)
chr7 (6-51)||(21559840-21559885)
chr7 (29-82)||(22330639-22330692)
chr7 (43-84)||(28036741-28036782)
chr7 (29-82)||(31274548-31274601)
chr7 (6-51)||(32815210-32815255)
chr7 (29-82)||(37351998-37352051)
chr7 (29-82)||(37856173-37856226)
chr7 (6-51)||(39231712-39231757)
chr7 (6-51)||(39332027-39332072)
chr7 (6-51)||(43573527-43573572)
chr7 (43-84)||(44495130-44495171)
chr7 (29-86)||(45420068-45420125)
chr7 (6-54)||(3343314-3343362)
chr7 (6-46)||(20482574-20482614)
chr7 (6-54)||(35452557-35452605)
chr7 (29-81)||(37832450-37832502)
[»] chr3 (65 HSPs)
chr3 (7-84)||(21005161-21005238)
chr3 (6-78)||(24645371-24645443)
chr3 (6-82)||(49761318-49761394)
chr3 (8-82)||(3281702-3281776)
chr3 (6-81)||(11234203-11234278)
chr3 (6-82)||(26672411-26672485)
chr3 (6-82)||(51465898-51465974)
chr3 (6-81)||(39907530-39907605)
chr3 (8-82)||(16675512-16675586)
chr3 (19-81)||(48893354-48893416)
chr3 (6-83)||(54195349-54195427)
chr3 (33-82)||(1765403-1765452)
chr3 (29-82)||(43169761-43169814)
chr3 (6-71)||(52937205-52937270)
chr3 (10-94)||(1337827-1337911)
chr3 (29-81)||(9753230-9753282)
chr3 (43-83)||(30909027-30909067)
chr3 (10-54)||(34057941-34057985)
chr3 (6-54)||(46019501-46019549)
chr3 (6-82)||(46094422-46094498)
chr3 (6-54)||(55400038-55400086)
chr3 (6-49)||(39020143-39020186)
chr3 (29-84)||(47683798-47683853)
chr3 (43-81)||(37927238-37927276)
chr3 (6-51)||(390851-390896)
chr3 (6-51)||(10206957-10207002)
chr3 (29-82)||(28700471-28700524)
chr3 (6-51)||(37508482-37508527)
chr3 (6-51)||(39697206-39697251)
chr3 (6-51)||(43905015-43905060)
chr3 (6-51)||(46253664-46253709)
chr3 (6-51)||(49363235-49363280)
chr3 (6-51)||(50206954-50206999)
chr3 (43-84)||(50207003-50207044)
chr3 (6-54)||(3953459-3953507)
chr3 (6-82)||(32421613-32421689)
chr3 (43-83)||(44677517-44677557)
chr3 (43-82)||(10207006-10207045)
chr3 (8-51)||(24482949-24482992)
chr3 (43-82)||(26996315-26996354)
chr3 (43-82)||(49983384-49983423)
chr3 (43-82)||(54773787-54773826)
chr3 (43-81)||(24482996-24483034)
chr3 (43-81)||(30567993-30568031)
chr3 (6-80)||(36412137-36412210)
chr3 (43-81)||(49363284-49363322)
chr3 (45-82)||(6999168-6999205)
chr3 (43-84)||(8821627-8821668)
chr3 (6-51)||(8821672-8821717)
chr3 (6-51)||(11633655-11633700)
chr3 (45-82)||(21196123-21196160)
chr3 (30-83)||(28430740-28430793)
chr3 (56-85)||(32759945-32759974)
chr3 (6-51)||(36121863-36121908)
chr3 (6-54)||(36670998-36671047)
chr3 (6-54)||(42358622-42358671)
chr3 (51-84)||(42683824-42683857)
chr3 (29-82)||(49361843-49361896)
chr3 (15-82)||(19149001-19149068)
chr3 (6-54)||(20080112-20080159)
chr3 (6-54)||(21196163-21196211)
chr3 (6-54)||(24095390-24095438)
chr3 (6-54)||(37927189-37927237)
chr3 (49-81)||(46574150-46574182)
chr3 (6-54)||(49417614-49417662)
[»] chr2 (62 HSPs)
chr2 (6-83)||(42678759-42678836)
chr2 (6-81)||(42866762-42866837)
chr2 (6-83)||(26277105-26277182)
chr2 (6-82)||(10711735-10711811)
chr2 (8-82)||(3012832-3012906)
chr2 (6-82)||(40937048-40937124)
chr2 (29-82)||(6646834-6646887)
chr2 (8-93)||(23352891-23352976)
chr2 (6-54)||(6170669-6170717)
chr2 (6-80)||(9377469-9377543)
chr2 (8-54)||(9634422-9634468)
chr2 (6-59)||(29712012-29712065)
chr2 (29-78)||(32972914-32972963)
chr2 (6-51)||(41569380-41569425)
chr2 (6-78)||(42372494-42372567)
chr2 (30-82)||(2971823-2971875)
chr2 (6-54)||(6999052-6999100)
chr2 (6-78)||(36212044-36212115)
chr2 (29-84)||(37966364-37966419)
chr2 (40-78)||(4299556-4299594)
chr2 (43-81)||(20911801-20911839)
chr2 (29-83)||(22353183-22353237)
chr2 (6-51)||(13347799-13347844)
chr2 (25-82)||(33737337-33737394)
chr2 (43-88)||(37257442-37257487)
chr2 (44-80)||(1836014-1836050)
chr2 (10-54)||(13765439-13765483)
chr2 (6-54)||(25881583-25881631)
chr2 (6-54)||(28245767-28245815)
chr2 (43-83)||(35589420-35589460)
chr2 (43-83)||(39449150-39449190)
chr2 (43-82)||(670500-670539)
chr2 (29-84)||(15141470-15141525)
chr2 (38-81)||(19316593-19316636)
chr2 (43-82)||(28679315-28679354)
chr2 (43-82)||(30977888-30977927)
chr2 (43-82)||(36802895-36802934)
chr2 (43-82)||(44254598-44254637)
chr2 (30-84)||(285478-285532)
chr2 (43-81)||(29051686-29051724)
chr2 (6-52)||(34119636-34119682)
chr2 (19-81)||(37737975-37738036)
chr2 (10-51)||(29684600-29684641)
chr2 (29-82)||(29795446-29795499)
chr2 (6-54)||(31578473-31578522)
chr2 (6-51)||(36802938-36802983)
chr2 (6-51)||(39213754-39213799)
chr2 (6-51)||(39449309-39449354)
chr2 (6-54)||(41042292-41042341)
chr2 (29-82)||(42607538-42607591)
chr2 (6-54)||(1416023-1416071)
chr2 (45-81)||(4753160-4753196)
chr2 (6-54)||(5054647-5054695)
chr2 (6-54)||(12498620-12498668)
chr2 (43-83)||(12498669-12498709)
chr2 (6-54)||(14233703-14233751)
chr2 (43-79)||(14233752-14233788)
chr2 (6-54)||(15269900-15269948)
chr2 (43-83)||(18176938-18176978)
chr2 (29-81)||(25801821-25801873)
chr2 (6-42)||(35589371-35589407)
chr2 (29-81)||(38600825-38600877)
[»] chr8 (66 HSPs)
chr8 (6-82)||(30439490-30439566)
chr8 (8-83)||(42569715-42569790)
chr8 (6-83)||(7586146-7586223)
chr8 (6-82)||(41541868-41541944)
chr8 (19-81)||(6968230-6968292)
chr8 (29-82)||(37657000-37657053)
chr8 (15-82)||(20174686-20174752)
chr8 (15-82)||(20219413-20219479)
chr8 (6-81)||(22706225-22706300)
chr8 (29-94)||(32954839-32954904)
chr8 (25-82)||(40413353-40413410)
chr8 (6-54)||(4658247-4658295)
chr8 (33-81)||(35356179-35356227)
chr8 (34-78)||(42885990-42886034)
chr8 (43-82)||(29440555-29440594)
chr8 (43-85)||(3946236-3946278)
chr8 (43-81)||(7592849-7592887)
chr8 (6-52)||(12707190-12707236)
chr8 (6-59)||(12898913-12898967)
chr8 (6-52)||(16327136-16327182)
chr8 (6-51)||(7955991-7956036)
chr8 (29-78)||(14710901-14710950)
chr8 (6-51)||(16613676-16613721)
chr8 (43-84)||(17775462-17775503)
chr8 (29-78)||(28646686-28646735)
chr8 (29-78)||(28651270-28651319)
chr8 (46-83)||(36531593-36531630)
chr8 (6-54)||(2733027-2733074)
chr8 (6-50)||(7473010-7473054)
chr8 (43-83)||(16966783-16966823)
chr8 (6-54)||(31596987-31597035)
chr8 (44-84)||(32843974-32844014)
chr8 (6-54)||(41159873-41159921)
chr8 (29-80)||(39211054-39211105)
chr8 (43-82)||(41600308-41600347)
chr8 (43-81)||(1633923-1633961)
chr8 (29-83)||(7010683-7010737)
chr8 (43-81)||(14707377-14707415)
chr8 (43-81)||(16872189-16872227)
chr8 (43-81)||(29991412-29991450)
chr8 (43-81)||(34718115-34718153)
chr8 (29-87)||(37392136-37392194)
chr8 (5-82)||(41639782-41639860)
chr8 (35-85)||(44607697-44607747)
chr8 (29-83)||(45405827-45405881)
chr8 (43-81)||(45529279-45529317)
chr8 (6-51)||(1633874-1633919)
chr8 (29-82)||(5740793-5740846)
chr8 (43-84)||(9549232-9549273)
chr8 (6-51)||(11017847-11017892)
chr8 (6-51)||(11657984-11658029)
chr8 (6-51)||(16872140-16872185)
chr8 (43-80)||(34591263-34591300)
chr8 (6-51)||(34718157-34718202)
chr8 (6-51)||(37783955-37784000)
chr8 (43-84)||(42443101-42443142)
chr8 (6-51)||(45529230-45529275)
chr8 (43-91)||(4671981-4672029)
chr8 (6-54)||(4994420-4994468)
chr8 (51-83)||(8645163-8645195)
chr8 (6-54)||(9549183-9549231)
chr8 (43-83)||(30136048-30136088)
chr8 (43-83)||(36064028-36064068)
chr8 (6-54)||(36531634-36531682)
chr8 (15-54)||(37449418-37449458)
chr8 (6-54)||(38234046-38234094)
[»] chr5 (43 HSPs)
chr5 (6-82)||(15953029-15953105)
chr5 (10-78)||(1839333-1839401)
chr5 (6-82)||(9226312-9226387)
chr5 (6-81)||(42267357-42267433)
chr5 (10-82)||(3640185-3640257)
chr5 (6-82)||(34270338-34270414)
chr5 (6-54)||(189687-189735)
chr5 (6-54)||(6517751-6517799)
chr5 (6-54)||(19481166-19481214)
chr5 (32-82)||(2224801-2224851)
chr5 (43-81)||(21064259-21064297)
chr5 (43-88)||(8267853-8267898)
chr5 (6-82)||(21136273-21136350)
chr5 (6-51)||(43441780-43441825)
chr5 (6-54)||(6446502-6446550)
chr5 (43-83)||(8920076-8920116)
chr5 (6-54)||(10649474-10649522)
chr5 (6-54)||(20770170-20770218)
chr5 (43-83)||(22402659-22402699)
chr5 (43-83)||(30640788-30640828)
chr5 (6-54)||(41175690-41175738)
chr5 (29-84)||(6865795-6865850)
chr5 (43-82)||(9977118-9977157)
chr5 (43-82)||(17402955-17402994)
chr5 (43-82)||(23126376-23126415)
chr5 (43-81)||(4430969-4431007)
chr5 (43-81)||(9933500-9933538)
chr5 (48-82)||(37700459-37700493)
chr5 (32-82)||(42509616-42509666)
chr5 (29-82)||(372728-372781)
chr5 (6-51)||(4430920-4430965)
chr5 (29-82)||(4434481-4434534)
chr5 (6-51)||(5042290-5042335)
chr5 (6-51)||(8675417-8675462)
chr5 (29-82)||(14206399-14206452)
chr5 (6-51)||(18842305-18842350)
chr5 (30-75)||(31284403-31284448)
chr5 (6-51)||(35098989-35099034)
chr5 (25-53)||(6529058-6529086)
chr5 (7-51)||(8267805-8267849)
chr5 (6-54)||(9581618-9581666)
chr5 (45-85)||(14324003-14324043)
chr5 (6-54)||(19839970-19840018)
[»] chr6 (36 HSPs)
chr6 (8-82)||(5028252-5028326)
chr6 (6-82)||(28041798-28041874)
chr6 (30-82)||(28748123-28748175)
chr6 (6-51)||(754422-754467)
chr6 (6-51)||(3610945-3610990)
chr6 (6-75)||(14699648-14699717)
chr6 (6-78)||(14693236-14693308)
chr6 (6-54)||(18141285-18141333)
chr6 (6-54)||(20822852-20822900)
chr6 (43-81)||(754471-754509)
chr6 (51-93)||(3198948-3198990)
chr6 (29-82)||(2060641-2060694)
chr6 (6-51)||(13143366-13143411)
chr6 (6-51)||(35213545-35213590)
chr6 (43-83)||(30152563-30152603)
chr6 (43-82)||(5327625-5327664)
chr6 (43-82)||(15318221-15318260)
chr6 (43-82)||(24842367-24842406)
chr6 (43-82)||(33421759-33421798)
chr6 (43-85)||(4820247-4820289)
chr6 (6-52)||(6531167-6531213)
chr6 (43-85)||(20822901-20822943)
chr6 (6-51)||(2075435-2075480)
chr6 (6-51)||(4820293-4820338)
chr6 (44-81)||(7611495-7611532)
chr6 (29-82)||(31517188-31517241)
chr6 (6-51)||(34504062-34504107)
chr6 (6-54)||(2689049-2689096)
chr6 (6-82)||(2943445-2943521)
chr6 (30-82)||(6158789-6158841)
chr6 (45-81)||(6531218-6531254)
chr6 (6-54)||(13658871-13658919)
chr6 (42-82)||(15722535-15722575)
chr6 (43-83)||(18141334-18141374)
chr6 (43-83)||(30036827-30036867)
chr6 (6-54)||(32046737-32046785)
[»] scaffold0100 (1 HSPs)
scaffold0100 (32-82)||(44785-44835)
[»] scaffold0136 (2 HSPs)
scaffold0136 (6-54)||(38464-38512)
scaffold0136 (43-84)||(38422-38463)
[»] scaffold0532 (1 HSPs)
scaffold0532 (6-54)||(11003-11051)
[»] scaffold0321 (1 HSPs)
scaffold0321 (43-83)||(19634-19674)
[»] scaffold0221 (1 HSPs)
scaffold0221 (43-82)||(8213-8252)
[»] scaffold0034 (1 HSPs)
scaffold0034 (43-82)||(22577-22616)
[»] scaffold0054 (1 HSPs)
scaffold0054 (29-91)||(31608-31670)
[»] scaffold0416 (1 HSPs)
scaffold0416 (6-54)||(6897-6945)
[»] scaffold0006 (1 HSPs)
scaffold0006 (19-83)||(73053-73117)


Alignment Details
Target: chr4 (Bit Score: 143; Significance: 3e-75; HSPs: 76)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 43 - 251
Target Start/End: Original strand, 46406007 - 46406215
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctctaatagaaaataggaaaagttcacaagttatagctcaagtggcaaaaatgttgaaccccaa 142  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46406007 aaaagttgtcaccaaatgaatattcaaatatcatttctctaatagaaaataggaaaagttcacaagttatagctcaagtggcaaaaatgttgaaccccaa 46406106  T
Q  143 ctcattcacttatgtgtgagttttcaataattatgcgttattttttctattnnnnnnnnnnnnnncattaataagtgtctgaggacctgctaaacatagt 242  Q
    ||||||||||||||||||||||||||||||||||| || ||||| ||||||              |||||||||||||||||| || |||||||||||||    
T  46406107 ctcattcacttatgtgtgagttttcaataattatgtgtcattttgtctattaaaaaaaataaaaacattaataagtgtctgagaacttgctaaacatagt 46406206  T
Q  243 aaaactatt 251  Q
    |||||||||    
T  46406207 aaaactatt 46406215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 31657733 - 31657654
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctctaat 85  Q
    |||||||| ||||||||||||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||    
T  31657733 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctctaat 31657654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 28657425 - 28657501
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||||| ||||| |||||||||||||||||||||    
T  28657425 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctct 28657501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 17683311 - 17683236
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||| ||||||||||||| |||||||| ||||| ||||||||||  ||||||||||||||||||||||||||    
T  17683311 agagagataaagtaaaaagtaatgtgagtataagagagaaagttgtcataaaatgaatgttcaaatatcatttctc 17683236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 26718455 - 26718377
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    |||||||| ||||||||||||| |||||||||||||| ||| ||||||  ||||| |||||||||||||||||||||||    
T  26718455 agagagataaagtaaaaagtaatgtgagtatgagagagaaaattgtcataaaatggatgttcaaatatcatttctctaa 26718377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 26731083 - 26731005
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    |||||||| ||||||||||||| |||||||||||||| ||| ||||||  ||||| |||||||||||||||||||||||    
T  26731083 agagagataaagtaaaaagtaatgtgagtatgagagagaaaattgtcataaaatggatgttcaaatatcatttctctaa 26731005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 43769796 - 43769722
Alignment:
Q  8 agagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||| ||||||||| ||| |||||||||||||| ||||||||||| ||||| |||||||||||||||||||||    
T  43769796 agagataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctct 43769722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 4949570 - 4949517
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  4949570 gtgagtatgagagagaaagttgtcaccaaatgaatgttcaaatatcatttctct 4949517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 17683434 - 17683359
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||| |||||||||||||  ||||||||||||| ||||||||||  ||||| ||||||||||||||||||||    
T  17683434 agagagataaagtaaaaagtaatatgagtatgagagataaagttgtcataaaatggatgttcaaatatcatttctc 17683359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 37066074 - 37065999
Alignment:
Q  7 gagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||| ||||||||| ||| |||||||||| |||||||||| |||||||||  || ||||||||||||||||||    
T  37066074 gagagataaagtaaaaaataatgtgagtatgaaagaaaaagttatcaccaaatagatattcaaatatcatttctct 37065999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 52846213 - 52846285
Alignment:
Q  8 agagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttct 80  Q
    |||||| ||||||||||||| |||||||||||||| ||||||||||  ||||  ||||| |||||||||||||    
T  52846213 agagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcataaaatagatgtttaaatatcatttct 52846285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 39312612 - 39312675
Alignment:
Q  18 taaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||| ||| |||||||||||||| ||||||||||| ||||  ||||||||||||||||||||    
T  39312612 taaaaaataatgtgagtatgagagagaaagttgtcactaaatagatgttcaaatatcatttctc 39312675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 22072312 - 22072263
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcattt 78  Q
    ||||||||||||||||||||||| || |||||| ||||||||||||||||    
T  22072312 gtgagtatgagagaaaaagttgtaacaaaatgattgttcaaatatcattt 22072263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 17475361 - 17475321
Alignment:
Q  42 aaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  17475361 aaaaagttatcaccaaatgaatgttcaaatatcatttctct 17475321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 38338906 - 38338954
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  38338906 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcac 38338954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 47965824 - 47965781
Alignment:
Q  8 agagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||| ||||||||||||| |||||||||||||||||||||||    
T  47965824 agagataaagtaaaaagtaatgtgagtatgagagaaaaagttgt 47965781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 53647433 - 53647487
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    |||||||||| | ||||| |||||| ||||||||||||||||||||||||||||||    
T  53647433 gtgagtatgaaaaaaaaa-ttgtcatcaaatgaatgttcaaatatcatttctctaa 53647487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 41082356 - 41082314
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctctaat 85  Q
    ||||||| ||||||||| |||||||||||||||||||||||||    
T  41082356 aaaagttatcaccaaataaatgttcaaatatcatttctctaat 41082314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 624296 - 624341
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| |||||||||||||| ||||||||    
T  624296 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgt 624341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 39344964 - 39345009
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| |||||||||||||| ||||||||    
T  39344964 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgt 39345009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 41486127 - 41486172
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| |||||||||||||| ||||||||    
T  41486127 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgt 41486172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 18882959 - 18883007
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||||||  |||||||||||||| |||||||||||    
T  18882959 agagagataaagtaaaaagtattgtgagtatgagagagaaagttgtcac 18883007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 28458361 - 28458409
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||| ||| |||||||||||||| |||||||||||    
T  28458361 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgtcac 28458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 30079884 - 30079844
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  30079884 aaaagttgtcactaaatggatgttcaaatatcatttctcta 30079844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 30170004 - 30170052
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||| ||| |||||||||||||| |||||||||||    
T  30170004 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgtcac 30170052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 35500808 - 35500860
Alignment:
Q  30 tgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||||||||| ||||||||||  |||| |||||||| |||||||||||||    
T  35500808 tgagtatgagagagaaagttgtcaaaaaataaatgttcatatatcatttctct 35500860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 54036538 - 54036590
Alignment:
Q  30 tgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||||||||| ||||||||||| |||||  ||| ||||||||||||||||    
T  54036538 tgagtatgagagataaagttgtcacaaaatggttgtacaaatatcatttctct 54036590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 55601685 - 55601761
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||||  |||||||  ||| |||||||||||||| ||||||||||  ||||  ||||||||||||| |||||||    
T  55601685 agagagatatagtaaaatataatgtgagtatgagagagaaagttgtcataaaatagatgttcaaatatcttttctct 55601761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 5386436 - 5386385
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttct 80  Q
    |||||||||||||| ||||||||||  |||||  ||||||||||||||||||    
T  5386436 gtgagtatgagagagaaagttgtcaaaaaatggttgttcaaatatcatttct 5386385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 13086060 - 13086021
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||| ||||||||| |||||||||||||||||    
T  13086060 aaaagttgtcacaaaatgaatgatcaaatatcatttctct 13086021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 14010102 - 14010145
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagtt 49  Q
    |||||||| |||||||||||||  ||||||||||||||||||||    
T  14010102 agagagataaagtaaaaagtaatatgagtatgagagaaaaagtt 14010145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 14010151 - 14010190
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  14010151 aaaagttgtcacaaaatggatgttcaaatatcatttctct 14010190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 22819687 - 22819648
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  22819687 aaaagttgtcacaaaatggatgttcaaatatcatttctct 22819648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 22819734 - 22819691
Alignment:
Q  8 agagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||| ||||||||||||| |||||||||||||| ||||||||    
T  22819734 agagataaagtaaaaagtaatgtgagtatgagagagaaagttgt 22819691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 23822278 - 23822317
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||  |||||||||||||||||||||||||||    
T  23822278 aaaagttgtcattaaatgaatgttcaaatatcatttctct 23822317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 45143657 - 45143731
Alignment:
Q  8 agagatgaagtaaaaagtaacgtgagtatgagagaaa--aagttgtcaccaaatgaatgttcaaatatcatttct 80  Q
    |||||| ||||||||| ||| |||| ||||||||| |  |||||||||  ||||| |||||||||||||||||||    
T  45143657 agagataaagtaaaaaataatgtgattatgagagagagaaagttgtcataaaatggatgttcaaatatcatttct 45143731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 80
Target Start/End: Original strand, 45152426 - 45152500
Alignment:
Q  8 agagatgaagtaaaaagtaacgtgagtatgagagaaa--aagttgtcaccaaatgaatgttcaaatatcatttct 80  Q
    |||||| ||||||||| ||| |||| ||||||||| |  |||||||||  ||||| |||||||||||||||||||    
T  45152426 agagataaagtaaaaaataatgtgattatgagagagagaaagttgtcataaaatggatgttcaaatatcatttct 45152500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 54669616 - 54669655
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||||||||| ||||| |||||||||||||||    
T  54669616 aaaagttgtcaccaaatggatgttgaaatatcatttctct 54669655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 31076090 - 31076052
Alignment:
Q  45 aagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  31076090 aagttgttaccaaatggatgttcaaatatcatttctcta 31076052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 32621690 - 32621636
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||| ||||| ||||||||||| |||||  ||| |||||||||||||||||    
T  32621690 gtgagtattagagagaaagttgtcacaaaatggttgtgcaaatatcatttctcta 32621636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 33860685 - 33860647
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||| ||||||||||||| ||||||||||||||||||||    
T  33860685 aaaaattgtcaccaaatggatgttcaaatatcatttctc 33860647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 47099060 - 47099022
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  47099060 aaaagttgtcacaaaatgaatattcaaatatcatttctc 47099022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 51741395 - 51741357
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||| |||| |||||||||||||||||||||    
T  51741395 aaaagttgtcactaaataaatgttcaaatatcatttctc 51741357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 51887701 - 51887663
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  51887701 aaaagttgtcacaaaatggatgttcaaatatcatttctc 51887663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 624345 - 624386
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    |||||||||||| ||||  |||||||||||||||||||||||    
T  624345 aaaagttgtcactaaatagatgttcaaatatcatttctctaa 624386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 2401648 - 2401611
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttct 80  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  2401648 aaaagttgtcacaaaatggatgttcaaatatcatttct 2401611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 9362711 - 9362752
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    |||||||||||  ||||| |||||||||||||||||||||||    
T  9362711 aaaagttgtcattaaatggatgttcaaatatcatttctctaa 9362752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 12138940 - 12138863
Alignment:
Q  6 agagagatgaagtaaaaag-taacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||| |||||||||  ||| |||||||  ||||| || |||||||| ||||  |||||||||||||||||||||    
T  12138940 agagagataaagtaaaaaaataatgtgagtagaagagagaacgttgtcacaaaattcatgttcaaatatcatttctct 12138863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 12799768 - 12799727
Alignment:
Q  40 agaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    ||||||||||||||| |||||||| || ||||||||||||||    
T  12799768 agaaaaagttgtcactaaatgaatatttaaatatcatttctc 12799727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 13086109 - 13086064
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| || |||||||||| |||||||||||||| ||||||||    
T  13086109 agagagataaaataaaaagtaatgtgagtatgagagagaaagttgt 13086064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 13104377 - 13104439
Alignment:
Q  18 taaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    ||||||||| |||||||||||||||    ||| |||| ||||| |||||||||||||||||| ||||    
T  13104377 taaaaagtagcgtgagtatgagaga----gttatcacaaaatggatgttcaaatatcatttcactaa 13104439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 14451430 - 14451393
Alignment:
Q  44 aaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  14451430 aaagttgtcactaaatggatgttcaaatatcatttctc 14451393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 14451480 - 14451435
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||    
T  14451480 agagagataaagtaaaaactaatgtgagtatgagagagaaagttgt 14451435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 21260385 - 21260340
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||| ||||| ||| |||||||||||||||||||||||    
T  21260385 agagagataaagaaaaaaataatgtgagtatgagagaaaaagttgt 21260340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 21617270 - 21617225
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||    
T  21617270 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgt 21617225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 54
Target Start/End: Original strand, 26724961 - 26725002
Alignment:
Q  14 gaagtaaaaag-taacgtgagtatgagagaaaaagttgtcac 54  Q
    ||||||||||| ||||||||||| ||||||||||||||||||    
T  26724961 gaagtaaaaagataacgtgagtaagagagaaaaagttgtcac 26725002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 27408241 - 27408192
Alignment:
Q  5 gagagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    ||||||||| ||||||||||||| || ||||||||| | |||||||||||    
T  27408241 gagagagataaagtaaaaagtaatgtaagtatgagaaagaaagttgtcac 27408192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 29175314 - 29175265
Alignment:
Q  6 agagagatgaagtaaaaag-taacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||  |||||||||| ||| ||||||||||||||||||||||||||    
T  29175314 agagagagaaagtaaaaagataatgtgagtatgagagaaaaagttgtcac 29175265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 30079933 - 30079888
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||    
T  30079933 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgt 30079888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 86
Target Start/End: Complemental strand, 30973649 - 30973592
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctctaata 86  Q
    |||||||||| ||||||||||||||  || ||  ||| ||||||||||||||||||||    
T  30973649 gtgagtatgaaagaaaaagttgtcataaagtggttgtacaaatatcatttctctaata 30973592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 47099109 - 47099064
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| ||||||||| |||| ||||||||    
T  47099109 agagagataaagtaaaaagtaatgtgagtatgtgagagaaagttgt 47099064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 48326604 - 48326555
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcattt 78  Q
    |||||||||||||||||||||||||| || ||  ||| ||||||||||||    
T  48326604 gtgagtatgagagaaaaagttgtcacaaagtggttgtacaaatatcattt 48326555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 5234480 - 5234532
Alignment:
Q  30 tgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||||||||| |||||| |||| || ||| ||| ||||||||||||||||    
T  5234480 tgagtatgagagagaaagttatcacaaagtgattgtacaaatatcatttctct 5234532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 9162105 - 9162065
Alignment:
Q  42 aaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||||||||| |||||| ||| ||||||||||||||||    
T  9162105 aaaaagttgtcacaaaatgattgtacaaatatcatttctct 9162065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 14527682 - 14527642
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||||||| ||||| ||||||||||||||||| ||||    
T  14527682 aaaagttgtcacaaaatggatgttcaaatatcatttttcta 14527642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 30778272 - 30778324
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||||| ||||||||||| || ||  ||| |||||||||||||||    
T  30778272 gtgagtatgagagagaaagttgtcacaaattggctgtacaaatatcatttctc 30778324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 32365675 - 32365727
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||| ||||||||| ||||||||||| |||||  ||| |||||||||||||||    
T  32365675 gtgaatatgagagagaaagttgtcacaaaatggttgtacaaatatcatttctc 32365727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 53
Target Start/End: Original strand, 34114121 - 34114149
Alignment:
Q  25 taacgtgagtatgagagaaaaagttgtca 53  Q
    |||||||||||||||||||||||||||||    
T  34114121 taacgtgagtatgagagaaaaagttgtca 34114149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 36111429 - 36111469
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    ||||||||| || ||||| ||||||||||||||||||||||    
T  36111429 aaaagttgttactaaatggatgttcaaatatcatttctcta 36111469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 37731978 - 37731926
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||||| ||||||||  | |||||| ||| |||||||||||||||    
T  37731978 gtgagtatgagagagaaagttgtaccaaaatgattgtacaaatatcatttctc 37731926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 39241309 - 39241361
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||||| ||||||||||| || ||  ||| |||||||||||||||    
T  39241309 gtgagtatgagagagaaagttgtcacaaattggttgtacaaatatcatttctc 39241361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 39345013 - 39345053
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||| ||||||| ||||| ||||||||||||||||||||||    
T  39345013 aaaaattgtcacaaaatggatgttcaaatatcatttctcta 39345053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 87
Target Start/End: Original strand, 45521612 - 45521656
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctctaatag 87  Q
    |||||||||||  ||||| |||| |||||||||||||||||||||    
T  45521612 aaaagttgtcataaaatggatgtacaaatatcatttctctaatag 45521656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 47965777 - 47965737
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    ||||||||| || |||||||||||||||||| |||||||||    
T  47965777 aaaagttgtaactaaatgaatgttcaaatattatttctcta 47965737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 51852163 - 51852115
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||| ||| |||| |||| ||||||||||||||||    
T  51852163 agagagataaagtaaaaaataatgtgaatatgggagaaaaagttgtcac 51852115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 54802688 - 54802732
Alignment:
Q  34 tatgagagaaaaagttgtcaccaaatgaatgttcaaatatcattt 78  Q
    |||| |||| ||||||||||| ||||| |||||||||||||||||    
T  54802688 tatgtgagagaaagttgtcacaaaatggatgttcaaatatcattt 54802732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 7e-24; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 44632615 - 44632539
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  44632615 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgtcaccaaatggatgttcaaatatcatttctct 44632539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 18336233 - 18336158
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  18336233 agagagataaagtaaaaactaatgtgagtatgagagagaaagttgtcacaaaatgaatgttcaaatatcatttctc 18336158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 48220128 - 48220204
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||||| ||||| |||||||||||||||||||||    
T  48220128 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctct 48220204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 50781554 - 50781630
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||| ||||||||||||| |||||||||||||| ||||||||||  ||||| |||||||||||||||||||||    
T  50781554 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcataaaatggatgttcaaatatcatttctct 50781630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 32319293 - 32319368
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    ||||||||||||| |||| ||| |||||||||||||| ||||||||||||||||| ||||| ||||||||||||||    
T  32319293 agagagatgaagtgaaaaataatgtgagtatgagagagaaagttgtcaccaaatggatgtttaaatatcatttctc 32319368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 19969546 - 19969620
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttct 80  Q
    |||||||| ||||||||||||| |||||||||||||| ||||||||||  ||||| |||||||||||||||||||    
T  19969546 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcataaaatggatgttcaaatatcatttct 19969620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 8200162 - 8200086
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||| ||| ||||||||| ||| |||||||||||||| ||||||||||| ||||| |||||||||||||||||||||    
T  8200162 agagggataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctct 8200086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 10 - 86
Target Start/End: Original strand, 49241493 - 49241569
Alignment:
Q  10 agatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctctaata 86  Q
    |||| ||||||||| ||| |||||||||||||| ||||||||||| || || |||||||||||||||||||||||||    
T  49241493 agataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaagtggatgttcaaatatcatttctctaata 49241569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 33358143 - 33358219
Alignment:
Q  7 gagagatgaagtaaaaag-taacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||| |||||||||  ||| |||||||||||||| ||||||||||| ||||| |||||||||||||||||||||    
T  33358143 gagagataaagtaaaaaaataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctct 33358219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 36673715 - 36673791
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatg-ttcaaatatcatttctc 81  Q
    |||||||| ||||||||| |||| ||||||||||||| ||||||||||||||||| ||| || ||||||||||||||    
T  36673715 agagagataaagtaaaaaataacatgagtatgagagagaaagttgtcaccaaatggatgttttaaatatcatttctc 36673791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 80
Target Start/End: Original strand, 50882094 - 50882168
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttct 80  Q
    |||||||| ||||||||| ||| || | ||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  50882094 agagagataaagtaaaaaataatgtaaatatgagagagaaaattgtcacaaaatgaatgttcaaatatcatttct 50882168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 16836123 - 16836175
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||||||||||||||||| |||||| ||| |||||||||||||||    
T  16836123 gtgagtatgagagaaaaagttgtcacaaaatgattgtacaaatatcatttctc 16836175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 36494550 - 36494478
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcattt 78  Q
    |||||||| |||| |||| |||  ||||||||||||| ||||||||||| ||||| |||||||||||||||||    
T  36494550 agagagataaagtgaaaaataatatgagtatgagagagaaagttgtcactaaatggatgttcaaatatcattt 36494478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 48624963 - 48624881
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtat--gagagaaa--aagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    |||||||| ||||||||| ||| ||||||||  ||||||||  |||||||||| ||||| |||||||||||||||||||||||    
T  48624963 agagagataaagtaaaaaataatgtgagtataagagagaaagtaagttgtcacaaaatggatgttcaaatatcatttctctaa 48624881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 1790546 - 1790507
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  1790546 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 1790507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 29 - 80
Target Start/End: Original strand, 45065909 - 45065960
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttct 80  Q
    |||||||||||||| ||||||||||| ||||| |||||||||||||||||||    
T  45065909 gtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttct 45065960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 50797843 - 50797790
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||||| ||||||||||| |||||| ||| ||||||||||||||||    
T  50797843 gtgagtatgagagagaaagttgtcacaaaatgattgtacaaatatcatttctct 50797790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 10890030 - 10890078
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  10890030 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcac 10890078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 13489749 - 13489701
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  13489749 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcac 13489701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 32915056 - 32915104
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  32915056 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcac 32915104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 47398459 - 47398511
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||||| ||| ||||||  ||||||||||||||||||||||||||    
T  47398459 gtgagtatgagagagaaaattgtcaaaaaatgaatgttcaaatatcatttctc 47398511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 6143761 - 6143695
Alignment:
Q  15 aagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    ||||||||| ||| || ||||||||||| ||||||||||| || || ||||||||| ||||||||||    
T  6143761 aagtaaaaaataatgtaagtatgagagagaaagttgtcacaaagtggatgttcaaacatcatttctc 6143695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 34254337 - 34254383
Alignment:
Q  8 agagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||||    
T  34254337 agagataaagtaaaaagtaatgtgagtatgagagataaagttgtcac 34254383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 902725 - 902680
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| |||||||||||||| ||||||||    
T  902725 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgt 902680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 7128156 - 7128115
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  7128156 aaaagttgtcactaaatggatgttcaaatatcatttctctaa 7128115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 8411751 - 8411792
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  8411751 aaaagttgtcactaaatggatgttcaaatatcatttctctaa 8411792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 19442544 - 19442503
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  19442544 aaaagttgtcacaaaatgattgttcaaatatcatttctctaa 19442503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 26837539 - 26837494
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| |||||||||||||||||||||||||||| ||| ||||    
T  26837539 agagagataaagtaaaaagtaacgtgagtatgagagagaaaattgt 26837494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 27687527 - 27687580
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||||| ||||||||||| |||||  ||| ||||||||||||||||    
T  27687527 gtgagtatgagagataaagttgtcacaaaatggttgtacaaatatcatttctct 27687580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 33054121 - 33054158
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttct 80  Q
    |||||||||||| |||||||||||||||||||||||||    
T  33054121 aaaagttgtcacaaaatgaatgttcaaatatcatttct 33054158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 40596062 - 40596115
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||||| ||||||||||| |||||  ||| ||||||||||||||||    
T  40596062 gtgagtatgagagagaaagttgtcacaaaatggttgtacaaatatcatttctct 40596115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 50328125 - 50328170
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| |||||||||||||||||||||||| ||| ||||||||    
T  50328125 agagagataaagtaaaaagtaacgtgagtatgaaagagaaagttgt 50328170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 51191875 - 51191830
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| |||||||| |||| |||||||||||||||||||||||    
T  51191875 agagagataaagtaaaatgtaatgtgagtatgagagaaaaagttgt 51191830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 1690497 - 1690445
Alignment:
Q  30 tgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||||||||||||||||||||| |||||  ||| ||||||| ||||||||    
T  1690497 tgagtatgagagaaaaagttgtcacaaaatggttgtacaaatattatttctct 1690445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 2211177 - 2211249
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcattt 78  Q
    |||||||| || |||||| ||| ||||| || ||||| ||| ||||||| |||||||| ||||||||||||||    
T  2211177 agagagataaaataaaaaataatgtgagcattagagagaaatttgtcacaaaatgaatattcaaatatcattt 2211249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 3226044 - 3226092
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||| ||| ||||||| ||||||||||||||||||    
T  3226044 agagagataaagtaaaaaataatgtgagtacgagagaaaaagttgtcac 3226092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 26585912 - 26585952
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  26585912 aaaagttgtcactaaatggatgttcaaatatcatttctcta 26585952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 34254386 - 34254426
Alignment:
Q  45 aagttgtcaccaaatgaatgttcaaatatcatttctctaat 85  Q
    |||||||||  ||||||||||||||||||||||||||||||    
T  34254386 aagttgtcataaaatgaatgttcaaatatcatttctctaat 34254426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 41507202 - 41507254
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||||| ||||||||||| |||||  ||| |||||||||||||||    
T  41507202 gtgagtatgagagagaaagttgtcacaaaatggttgtacaaatatcatttctc 41507254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 47214295 - 47214247
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||| ||| |||||||||||||| |||||||||||    
T  47214295 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgtcac 47214247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 52362569 - 52362521
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||| ||| |||||||||||||| |||||||||||    
T  52362569 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgtcac 52362521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 52714885 - 52714933
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| |||||||||||||||||||||||||| | ||| |||||||    
T  52714885 agagagataaagtaaaaagtaacgtgagtatgagaaagaaaattgtcac 52714933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 15705055 - 15705094
Alignment:
Q  15 aagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    ||||||||||||| |||||||||||||| |||||||||||    
T  15705055 aagtaaaaagtaatgtgagtatgagagagaaagttgtcac 15705094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 34818053 - 34818104
Alignment:
Q  30 tgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    ||||||||||||| |||||||| |  |||||||||| |||||||||||||||    
T  34818053 tgagtatgagagagaaagttgttaggaaatgaatgtacaaatatcatttctc 34818104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 36577398 - 36577441
Alignment:
Q  8 agagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||| ||||||||||||| |||||||||||||| ||||||||    
T  36577398 agagataaagtaaaaagtaatgtgagtatgagagagaaagttgt 36577441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 37588708 - 37588747
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||| |||| ||||||||||||||||||||||    
T  37588708 aaaagttgtcacaaaataaatgttcaaatatcatttctct 37588747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 46082154 - 46082193
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  46082154 aaaagttgtcactaaatggatgttcaaatatcatttctct 46082193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 756894 - 756856
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  756894 aaaagttgtcactaaatggatgttcaaatatcatttctc 756856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 1852984 - 1853026
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctctaat 85  Q
    |||||||||||| ||||  ||||||||||||||||||||||||    
T  1852984 aaaagttgtcactaaatagatgttcaaatatcatttctctaat 1853026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 3603149 - 3603111
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  3603149 aaaagttgtcactaaatggatgttcaaatatcatttctc 3603111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 4470347 - 4470385
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  4470347 aaaagttgtcacaaaatggatgttcaaatatcatttctc 4470385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 81
Target Start/End: Complemental strand, 16986968 - 16986938
Alignment:
Q  51 tcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||||||||||||||||||||||    
T  16986968 tcaccaaatgaatgttcaaatatcatttctc 16986938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 35136882 - 35136844
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  35136882 aaaagttgtcacaaaatggatgttcaaatatcatttctc 35136844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 36577445 - 36577483
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  36577445 aaaagttgtcacaaaatggatgttcaaatatcatttctc 36577483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 40316928 - 40316974
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtc 52  Q
    |||||||| ||||||||||||| |||||||||||||| ||| |||||    
T  40316928 agagagataaagtaaaaagtaatgtgagtatgagagagaaaattgtc 40316974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 44789176 - 44789214
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  44789176 aaaagttgtcacaaaatggatgttcaaatatcatttctc 44789214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 2854993 - 2855034
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    |||||||||||  |||||||||| ||||||||||||||||||    
T  2854993 aaaagttgtcataaaatgaatgtacaaatatcatttctctaa 2855034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 3603198 - 3603153
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| || |||||||||| |||||||||||||| ||||||||    
T  3603198 agagagataaactaaaaagtaatgtgagtatgagagagaaagttgt 3603153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 3851245 - 3851196
Alignment:
Q  6 agagagatgaagtaaaaag-taacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| |||||||||| ||| |||||||||||||| |||||||||||    
T  3851245 agagagatcaagtaaaaagataatgtgagtatgagagagaaagttgtcac 3851196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 4857968 - 4857919
Alignment:
Q  35 atgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    |||||||| ||||||||||  || ||| ||||||||||||||||||||||    
T  4857968 atgagagagaaagttgtcaaaaagtgattgttcaaatatcatttctctaa 4857919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 8411702 - 8411747
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||    
T  8411702 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgt 8411747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 9008312 - 9008267
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||    
T  9008312 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgt 9008267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 20565102 - 20565147
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||| ||||| |||||||||||||| ||||||||    
T  20565102 agagagataaagtaaagagtaatgtgagtatgagagagaaagttgt 20565147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 21340609 - 21340564
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| |||||||||| ||| ||||||||    
T  21340609 agagagataaagtaaaaagtaatgtgagtatgaaagagaaagttgt 21340564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 30658881 - 30658918
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttct 80  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  30658881 aaaagttgtcacaaaatggatgttcaaatatcatttct 30658918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 33054072 - 33054117
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||    
T  33054072 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgt 33054117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 34040484 - 34040529
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||    
T  34040484 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgt 34040529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 35136931 - 35136886
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| |||||||||||| | ||||||||    
T  35136931 agagagataaagtaaaaagtaatgtgagtatgagaaagaaagttgt 35136886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 36779253 - 36779298
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| || ||||||||| ||||||||||    
T  36779253 agagagataaagtaaaaagtaatgtaagtatgagaaaaaaagttgt 36779298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 46082105 - 46082150
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| ||||||||| |||| ||||||||    
T  46082105 agagagataaagtaaaaagtaatgtgagtatgcgagagaaagttgt 46082150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 49453543 - 49453490
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||||| ||||||||||| || ||  ||| ||||||||||||||||    
T  49453543 gtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctct 49453490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 7171221 - 7171268
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||| ||| |||||||||||||| |||||||||||    
T  7171221 agagagataaagtaaaaa-taatgtgagtatgagagataaagttgtcac 7171268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 16987021 - 16986977
Alignment:
Q  10 agatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||| ||||||||| ||| |||||||||||||| |||||||||||    
T  16987021 agataaagtaaaaaataatgtgagtatgagagagaaagttgtcac 16986977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 30467559 - 30467599
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||||||  |||||| |||||||||||||||||||||    
T  30467559 aaaagttgtcaaaaaatgactgttcaaatatcatttctcta 30467599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 33024604 - 33024644
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||||||| ||||  ||||||||||||||||||||||    
T  33024604 aaaagttgtcactaaatagatgttcaaatatcatttctcta 33024644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 34040533 - 34040573
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    ||||||| |||| ||||| ||||||||||||||||||||||    
T  34040533 aaaagttatcacaaaatggatgttcaaatatcatttctcta 34040573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 40139178 - 40139126
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||||| ||||||||||  |||||  ||| |||||||||||||||    
T  40139178 gtgagtatgagagagaaagttgtcataaaatggttgtacaaatatcatttctc 40139126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 43893295 - 43893255
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    ||||||||| || ||||| ||||||||||||||||||||||    
T  43893295 aaaagttgtgacaaaatggatgttcaaatatcatttctcta 43893255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 48103398 - 48103449
Alignment:
Q  30 tgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||||||||| |||||||||| |||||   ||||||||||||||||||||    
T  48103398 tgagtatgagagagaaagttgtca-caaatagttgttcaaatatcatttctct 48103449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 51286351 - 51286399
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| || |||||| ||| |||||||||||||| |||||||||||    
T  51286351 agagagataaaataaaaaataatgtgagtatgagagagaaagttgtcac 51286399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 55; Significance: 1e-22; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 3293216 - 3293138
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    |||||||| ||||||||| | | |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3293216 agagagataaagtaaaaaattatgtgaatatgagagagaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 3293138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 3062417 - 3062343
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttct 80  Q
    |||||||| ||||||||||||| |||||||| ||||| ||||||||||| ||||| |||||||||||||||||||    
T  3062417 agagagataaagtaaaaagtaatgtgagtataagagagaaagttgtcacaaaatggatgttcaaatatcatttct 3062343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 11352960 - 11353034
Alignment:
Q  8 agagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||| ||||||||||||| |||||||||||||| ||||||||||| ||||  |||||||||||||||||||||    
T  11352960 agagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcacaaaattgatgttcaaatatcatttctct 11353034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 47078235 - 47078319
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctctaatagaaa 90  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||||  ||||  |||||||||||||||||||||||| ||||    
T  47078235 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgtcataaaatagatgttcaaatatcatttctctaattgaaa 47078319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 7817723 - 7817650
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttct 80  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||||| ||||| |||||||||||||||||||    
T  7817723 agagagataaagtaaaaa-taatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttct 7817650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 3937107 - 3937182
Alignment:
Q  8 agagatgaagtaaaaag-taacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||| |||||||||| ||| |||||||||||||| ||||||||||| ||||  |||||||||||||||||||||    
T  3937107 agagataaagtaaaaagataatgtgagtatgagagagaaagttgtcacaaaatagatgttcaaatatcatttctct 3937182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 44303991 - 44303925
Alignment:
Q  15 aagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||| |||||||||||| ||| ||||    
T  44303991 aagtaaaaa-taatgtgagtatgagataaaaagttgtcaccaaatggatgttcaaatatgattactct 44303925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 33180743 - 33180784
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  33180743 aaaagttgtcacaaaatgaatgttcaaatatcatttctctaa 33180784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 33224887 - 33224834
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||||| ||||||||||| ||||  |||||||||||||||||||||    
T  33224887 gtgagtatgagagagaaagttgtcacaaaatagatgttcaaatatcatttctct 33224834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 36019501 - 36019437
Alignment:
Q  8 agagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatat 73  Q
    |||||| ||||||||| ||| |||||||||||||| |||||||||  |||||||||||||||||||    
T  36019501 agagataaagtaaaaa-taatgtgagtatgagagagaaagttgtcgtcaaatgaatgttcaaatat 36019437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 38779728 - 38779773
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||    
T  38779728 agagagatgaagtaaaaaataatgtgagtatgagagaaaaagttgt 38779773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 31711944 - 31711996
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||| | ||||||||||| |||||||| |||||||||||||||||    
T  31711944 gtgagtatgagaaagaaagttgtcacaaaatgaatattcaaatatcatttctc 31711996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 44184543 - 44184591
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  44184543 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcac 44184591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 16980335 - 16980296
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  16980335 aaaagttgtcacaaaatgaatgttcaaatatcatttctct 16980296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 41399147 - 41399222
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||| ||||||||| |||  ||||||||||||| |||||| |||| ||||  ||||||||||| ||||||||    
T  41399147 agagagataaagtaaaaaataatatgagtatgagagataaagttatcacaaaatagatgttcaaataccatttctc 41399222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 81
Target Start/End: Complemental strand, 42926199 - 42926152
Alignment:
Q  34 tatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    ||||||||| |||||||||||||||| ||| |||||||||||||||||    
T  42926199 tatgagagagaaagttgtcaccaaataaatattcaaatatcatttctc 42926152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 21023150 - 21023188
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  21023150 aaaagttgtcactaaatgaatgttcaaatatcatttctc 21023188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 81
Target Start/End: Original strand, 21347313 - 21347376
Alignment:
Q  16 agtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||| ||| ||||||||||||||||  |||||||| ||||| || |||||||||||||||||    
T  21347313 agtaaaaaataatgtgagtatgagagaaa--gttgtcacaaaatggatcttcaaatatcatttctc 21347376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 25887646 - 25887592
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||||||||| ||||||||||| || || |||| |||||||||||||||||    
T  25887646 gtgagtatgagagagaaagttgtcacaaagtggatgtacaaatatcatttctcta 25887592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 37899361 - 37899319
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctctaat 85  Q
    |||||||||||| ||||| ||||||||||||||||||||||||    
T  37899361 aaaagttgtcacaaaatggatgttcaaatatcatttctctaat 37899319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 46812938 - 46812980
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctctaat 85  Q
    |||||||||||| ||||||||||||||||||||||||| ||||    
T  46812938 aaaagttgtcacaaaatgaatgttcaaatatcatttctttaat 46812980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 29162960 - 29163005
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| |||||||||||||| ||||||||    
T  29162960 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgt 29163005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 41985108 - 41985161
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||||| ||||||||||| || ||| ||| ||||||||||||||||    
T  41985108 gtgagtatgagagagaaagttgtcacaaattgattgtacaaatatcatttctct 41985161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 41894002 - 41893954
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||||||| |||||||||| ||| |||||||||||    
T  41894002 agagagataaagtaaaaagtaatgtgagtatgaaagagaaagttgtcac 41893954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 13729764 - 13729725
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  13729764 aaaagttgtcacaaaatggatgttcaaatatcatttctct 13729725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 35293180 - 35293125
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    |||||||| ||| | ||||||||||  ||||| |||||||||||||||||||||||    
T  35293180 gtgagtataagaaagaaagttgtcaaaaaatggatgttcaaatatcatttctctaa 35293125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 237076 - 237026
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttc 79  Q
    |||||||||||||| ||||||||||| || ||| ||| |||||||||||||    
T  237076 gtgagtatgagagataaagttgtcacaaattgattgtacaaatatcatttc 237026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 37899246 - 37899288
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctctaat 85  Q
    |||| ||||||| ||||| ||||||||||||||||||||||||    
T  37899246 aaaaattgtcacaaaatggatgttcaaatatcatttctctaat 37899288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 39332023 - 39331985
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  39332023 aaaagttgtcactaaatggatgttcaaatatcatttctc 39331985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 81
Target Start/End: Complemental strand, 39823839 - 39823809
Alignment:
Q  51 tcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||||||||||||||||||||||    
T  39823839 tcaccaaatgaatgttcaaatatcatttctc 39823809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 2469755 - 2469702
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||||| ||||||||||| || ||  ||| ||||||||||||||||    
T  2469755 gtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctct 2469702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 6822541 - 6822594
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||||||||||||||||||| |  |||||  ||| ||||||||||||||||    
T  6822541 gtgagtatgagagaaaaagttgttagaaaatggttgtacaaatatcatttctct 6822594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 13163006 - 13162961
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| |||||||||||||  ||||||||||||| ||||||||    
T  13163006 agagagataaagtaaaaagtaatatgagtatgagagagaaagttgt 13162961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 19786063 - 19786108
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| ||||||||| |||| ||||||||    
T  19786063 agagagataaagtaaaaagtaatgtgagtatgtgagagaaagttgt 19786108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 80
Target Start/End: Original strand, 19786112 - 19786149
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttct 80  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  19786112 aaaagttgtcactaaatggatgttcaaatatcatttct 19786149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 21559885 - 21559840
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||    
T  21559885 agagagataaagtaaaaaataatgtgagtatgagagataaagttgt 21559840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 22330639 - 22330692
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||||| ||||||||||| || ||  ||| ||||||||||||||||    
T  22330639 gtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctct 22330692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 28036782 - 28036741
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    |||||||||||| | |||||||||||||||| ||||||||||    
T  28036782 aaaagttgtcacaacatgaatgttcaaatattatttctctaa 28036741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 31274548 - 31274601
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||| ||||||||||||||||| || ||  ||| ||||||||||||||||    
T  31274548 gtgagtataagagaaaaagttgtcacaaattggttgtacaaatatcatttctct 31274601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 32815255 - 32815210
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||| ||| |||||||||||||||||| ||||    
T  32815255 agagagataaagtaaaaaataatgtgagtatgagagaaaaaattgt 32815210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 37351998 - 37352051
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||||| ||||||||||| || ||  ||| ||||||||||||||||    
T  37351998 gtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctct 37352051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 37856173 - 37856226
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||||| |||| ||||||||||| |||||  ||| ||||||||||||||||    
T  37856173 gtgagtatgtgagataaagttgtcacaaaatggttgtacaaatatcatttctct 37856226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 39231712 - 39231757
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||    
T  39231712 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgt 39231757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 39332072 - 39332027
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| |||||||| ||||| ||||||||    
T  39332072 agagagataaagtaaaaagtaatgtgagtataagagagaaagttgt 39332027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 43573527 - 43573572
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| |||| ||||||||| ||||||||    
T  43573527 agagagataaagtaaaaagtaatgtgaatatgagagagaaagttgt 43573572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 44495130 - 44495171
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    ||||||||||| |||||| || ||||||||||||||||||||    
T  44495130 aaaagttgtcatcaaatggatattcaaatatcatttctctaa 44495171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 45420068 - 45420125
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctctaata 86  Q
    |||| ||||||||| ||||||||||  ||||   ||||||||||||||||||||||||    
T  45420068 gtgaatatgagagagaaagttgtcaaaaaatagttgttcaaatatcatttctctaata 45420125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 3343314 - 3343362
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||||||| |||| ||||||||| ||| |||||||    
T  3343314 agagagataaagtaaaaagtaatgtgaatatgagagagaaaattgtcac 3343362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 20482614 - 20482574
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaa 46  Q
    |||||||| ||||||||| ||| ||||||||||||||||||    
T  20482614 agagagataaagtaaaaaataaagtgagtatgagagaaaaa 20482574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 35452557 - 35452605
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||| | | |||||||||||||| |||||||||||    
T  35452557 agagagataaagtaaaaaattatgtgagtatgagagagaaagttgtcac 35452605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 37832502 - 37832450
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||||||| ||||||||| ||||   ||| |||||||||||||||    
T  37832502 gtgagtatgagagaaagagttgtcacaaaatagttgtacaaatatcatttctc 37832450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 54; Significance: 4e-22; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 21005161 - 21005238
Alignment:
Q  7 gagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    ||||||| |||||||||||||||||||||| ||||| ||||||||||| ||||  |||||||||||||||||||||||    
T  21005161 gagagataaagtaaaaagtaacgtgagtataagagagaaagttgtcacaaaatagatgttcaaatatcatttctctaa 21005238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 24645443 - 24645371
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcattt 78  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||||  ||||| |||||||||||||||||    
T  24645443 agagagataaagtaaaaagtaatgtgagtatgagagaaaaagttgtcataaaatggatgttcaaatatcattt 24645371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 49761394 - 49761318
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||||| ||||| |||||||||||||||||||||    
T  49761394 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctct 49761318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 3281702 - 3281776
Alignment:
Q  8 agagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||| ||||||||||||| |||||||| ||||| ||||||||||| |||| ||||||||||||||||||||||    
T  3281702 agagataaagtaaaaagtaatgtgagtataagagagaaagttgtcacaaaataaatgttcaaatatcatttctct 3281776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 11234278 - 11234203
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||| || |||||| ||||||||| |||||||||||||||||||  ||||| ||||||||||||||||||||    
T  11234278 agagagataaaataaaaaataacgtgagaatgagagaaaaagttgtcagtaaatggatgttcaaatatcatttctc 11234203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 26672485 - 26672411
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||| ||||||||| ||| |||||||||||||| || |||||||| |||||||||||||||||||||||||||    
T  26672485 agagagataaagtaaaaa-taatgtgagtatgagagagaa-gttgtcacaaaatgaatgttcaaatatcatttctct 26672411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 51465898 - 51465974
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||| |||||||||||||  ||||||||||||| ||||| ||||| ||||  |||||||||||||||||||||    
T  51465898 agagagataaagtaaaaagtaatatgagtatgagagagaaagtggtcacaaaatagatgttcaaatatcatttctct 51465974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 39907530 - 39907605
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    ||||| || ||||||||| ||| ||||||||||||||||||||| |||  |||| |||||||||||||||||||||    
T  39907530 agagaaataaagtaaaaaataatgtgagtatgagagaaaaagttatcattaaataaatgttcaaatatcatttctc 39907605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 16675512 - 16675586
Alignment:
Q  8 agagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||| |||||||||||||||||| ||||||||| ||| ||||||| | ||| ||| |||||||||||||||||    
T  16675512 agagataaagtaaaaagtaacgtgaatatgagagagaaaattgtcacaagatggatgctcaaatatcatttctct 16675586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 48893416 - 48893354
Alignment:
Q  19 aaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    ||||| ||| |||||||||||||||||| ||||||  ||||||||||| ||||||||||||||    
T  48893416 aaaaaataatgtgagtatgagagaaaaaattgtcaaaaaatgaatgtttaaatatcatttctc 48893354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 54195427 - 54195349
Alignment:
Q  6 agagagatgaagtaaaaag-taacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||| |||||||||  ||| |||||||| | ||| ||||||||||| ||||| ||||||||||||||||||||||    
T  54195427 agagagataaagtaaaaaaataatgtgagtataaaagagaaagttgtcactaaatggatgttcaaatatcatttctcta 54195349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 82
Target Start/End: Complemental strand, 1765452 - 1765403
Alignment:
Q  33 gtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||| ||||||||||| |||||||||| ||||||||||||||||    
T  1765452 gtatgagagagaaagttgtcacaaaatgaatgtacaaatatcatttctct 1765403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 43169761 - 43169814
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||||||||||||||||| |||||  ||| ||||||||||||||||    
T  43169761 gtgagtatgagagaaaaagttgtcacaaaatggttgtacaaatatcatttctct 43169814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 52937270 - 52937205
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaat 71  Q
    |||||||| ||||||||||||| |||||||||||| | ||||||||||  |||| |||||||||||    
T  52937270 agagagataaagtaaaaagtaatgtgagtatgagatagaaagttgtcataaaataaatgttcaaat 52937205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 1337827 - 1337911
Alignment:
Q  10 agatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctctaatagaaaatag 94  Q
    |||| ||||||||| ||| |||||||||||| | ||| ||||||  ||||| ||||||||||||||||||||  | |||||||||    
T  1337827 agataaagtaaaaaataatgtgagtatgagatagaaaattgtcataaaatggatgttcaaatatcatttctcataaagaaaatag 1337911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 9753282 - 9753230
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||||| ||| ||||||| |||||| |||||||||||||||||||    
T  9753282 gtgagtatgagagataaaattgtcacaaaatgattgttcaaatatcatttctc 9753230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 30909067 - 30909027
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  30909067 aaaagttgtcactaaatgaatgttcaaatatcatttctcta 30909027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 34057941 - 34057985
Alignment:
Q  10 agatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||| |||||||||||||||||||||||||||| |||||||||||    
T  34057941 agataaagtaaaaagtaacgtgagtatgagagagaaagttgtcac 34057985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 46019549 - 46019501
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  46019549 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcac 46019501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 46094498 - 46094422
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||| || |||||| ||| |||||||||| | | ||||||||||  |||||||||| ||||||||||||||||    
T  46094498 agagagataaaataaaaaataatgtgagtatgaaatagaaagttgtcataaaatgaatgtccaaatatcatttctct 46094422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 55400086 - 55400038
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  55400086 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcac 55400038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 39020143 - 39020186
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagtt 49  Q
    |||||||| ||||||||||||| |||||||||||||||||||||    
T  39020143 agagagataaagtaaaaagtaatgtgagtatgagagaaaaagtt 39020186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 47683853 - 47683798
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    |||||||||||||| ||||||||||| |||||  ||| ||||||||||||||||||    
T  47683853 gtgagtatgagagagaaagttgtcacaaaatggttgtacaaatatcatttctctaa 47683798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 37927238 - 37927276
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  37927238 aaaagttgtcaccaaatggatgttcaaatatcatttctc 37927276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 390896 - 390851
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||| ||| |||||||||||||||||||||||    
T  390896 agagagataaagtaaaaaataatgtgagtatgagagaaaaagttgt 390851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 10206957 - 10207002
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| |||||||||||||| ||||||||    
T  10206957 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgt 10207002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 28700524 - 28700471
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||||| ||||||||||  |||||  ||||||||||||||||||||    
T  28700524 gtgagtatgagagataaagttgtcaaaaaatggttgttcaaatatcatttctct 28700471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 37508482 - 37508527
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| |||||||||||||| ||||||||    
T  37508482 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgt 37508527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 39697206 - 39697251
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| |||||||||||||| ||||||||    
T  39697206 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgt 39697251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 43905060 - 43905015
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| |||||||||||||| ||||||||    
T  43905060 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgt 43905015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 46253709 - 46253664
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| |||||||||||||||||| ||||    
T  46253709 agagagataaagtaaaaagtaatgtgagtatgagagaaaaaattgt 46253664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 49363235 - 49363280
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| |||||||||||||| ||||||||    
T  49363235 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgt 49363280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 50206954 - 50206999
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| |||||||||||||| ||||||||    
T  50206954 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgt 50206999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 50207003 - 50207044
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    |||||||||||| ||||| |||||||||||||||||||||||    
T  50207003 aaaagttgtcacaaaatggatgttcaaatatcatttctctaa 50207044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 3953459 - 3953507
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    ||||||||  |||||||||||| |||||||||||||| |||||||||||    
T  3953459 agagagatagagtaaaaagtaatgtgagtatgagagagaaagttgtcac 3953507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 32421613 - 32421689
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||| ||||||||| | |  ||||||||||||| |||||| | | |||||  |||||||||||||||||||||    
T  32421613 agagagataaagtaaaaaatgatatgagtatgagagagaaagttattatcaaatagatgttcaaatatcatttctct 32421689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 44677517 - 44677557
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  44677517 aaaagttgtcactaaatggatgttcaaatatcatttctcta 44677557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 10207006 - 10207045
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  10207006 aaaagttgtcactaaatggatgttcaaatatcatttctct 10207045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 24482949 - 24482992
Alignment:
Q  8 agagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||| ||||||||||||| |||||||||||||| ||||||||    
T  24482949 agagataaagtaaaaagtaatgtgagtatgagagagaaagttgt 24482992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 26996354 - 26996315
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||||| || |||||||||||||||||||||||||||    
T  26996354 aaaagttgttactaaatgaatgttcaaatatcatttctct 26996315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 49983384 - 49983423
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||||| |||||||| |||||||||||||||||||||    
T  49983384 aaaagttgtaaccaaatggatgttcaaatatcatttctct 49983423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 54773787 - 54773826
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  54773787 aaaagttgtcactaaatggatgttcaaatatcatttctct 54773826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 24482996 - 24483034
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  24482996 aaaagttgtcacaaaatggatgttcaaatatcatttctc 24483034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 30567993 - 30568031
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||| |||| |||||||||||||||||||||    
T  30567993 aaaagttgtcacaaaataaatgttcaaatatcatttctc 30568031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 36412210 - 36412137
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttct 80  Q
    ||||| || ||||||| | ||| |||| ||||||||||||| || |||| ||||| |||||||||||||||||||    
T  36412210 agagaaataaagtaaataataatgtgattatgagagaaaaaatt-tcacaaaatggatgttcaaatatcatttct 36412137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 49363284 - 49363322
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  49363284 aaaagttgtcactaaatggatgttcaaatatcatttctc 49363322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 6999205 - 6999168
Alignment:
Q  45 aagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||  |||||||||||||||||||||||||||    
T  6999205 aagttgtcataaaatgaatgttcaaatatcatttctct 6999168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 8821668 - 8821627
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    |||||||||||| ||||  |||||||||||||||||||||||    
T  8821668 aaaagttgtcactaaatagatgttcaaatatcatttctctaa 8821627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 8821717 - 8821672
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||    
T  8821717 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgt 8821672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 11633700 - 11633655
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| |||| ||||||||| ||||||||    
T  11633700 agagagataaagtaaaaagtaatgtgaatatgagagagaaagttgt 11633655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 21196160 - 21196123
Alignment:
Q  45 aagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  21196160 aagttgtcacaaaatggatgttcaaatatcatttctct 21196123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 83
Target Start/End: Complemental strand, 28430793 - 28430740
Alignment:
Q  30 tgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    ||||||||| ||| |||||||| | |||||| |||||||||||| |||||||||    
T  28430793 tgagtatgatagagaaagttgttatcaaatggatgttcaaatattatttctcta 28430740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 85
Target Start/End: Original strand, 32759945 - 32759974
Alignment:
Q  56 aaatgaatgttcaaatatcatttctctaat 85  Q
    ||||||||||||||||||||||||||||||    
T  32759945 aaatgaatgttcaaatatcatttctctaat 32759974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 36121908 - 36121863
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| |||||||||||||||||||||| ||| | ||||||||    
T  36121908 agagagataaagtaaaaagtaacgtgagtataagaaagaaagttgt 36121863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 36670998 - 36671047
Alignment:
Q  6 agagagatgaagtaaaaag-taacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||  |||||||||| ||| ||||||||||||||||||||||||||    
T  36670998 agagagaaaaagtaaaaagataatgtgagtatgagagaaaaagttgtcac 36671047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 42358622 - 42358671
Alignment:
Q  6 agagagatgaagtaaaaag-taacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| |||||||||| ||| |||||||||||||| |||||||||||    
T  42358622 agagagataaagtaaaaagataatgtgagtatgagagagaaagttgtcac 42358671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 42683857 - 42683824
Alignment:
Q  51 tcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    |||| |||||||||||||||||||||||||||||    
T  42683857 tcacaaaatgaatgttcaaatatcatttctctaa 42683824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 49361843 - 49361896
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||||||||||||||    |||||| ||| ||||||||||||||||    
T  49361843 gtgagtatgagagaaaaagttgtacaaaaatgattgtacaaatatcatttctct 49361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 19149068 - 19149001
Alignment:
Q  15 aagtaaaaag-taacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||| ||| |||||||||||||| |||||| | |  |||||| ||||||||||||||||||||    
T  19149068 aagtaaaaagataatgtgagtatgagagagaaagttataaa-aaatgattgttcaaatatcatttctct 19149001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 20080159 - 20080112
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||| ||| |||||||||||||| |||||||||||    
T  20080159 agagagataaagtaaaaa-taatgtgagtatgagagagaaagttgtcac 20080112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 21196211 - 21196163
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||| ||| || ||||||||||| |||||||||||    
T  21196211 agagagataaagtaaaaaataatgtaagtatgagagagaaagttgtcac 21196163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 24095390 - 24095438
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    ||||| || ||||||||| ||| |||||||||||||| |||||||||||    
T  24095390 agagaaataaagtaaaaaataatgtgagtatgagagagaaagttgtcac 24095438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 37927189 - 37927237
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||| | | |||||||||||||| |||||||||||    
T  37927189 agagagataaagtaaaaaattatgtgagtatgagagagaaagttgtcac 37927237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 81
Target Start/End: Complemental strand, 46574182 - 46574150
Alignment:
Q  49 tgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||| ||||||||||||||||||||||||||    
T  46574182 tgtcacaaaatgaatgttcaaatatcatttctc 46574150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 49417662 - 49417614
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| || |||||| ||| |||||||||||||| |||||||||||    
T  49417662 agagagataaaataaaaaataatgtgagtatgagagagaaagttgtcac 49417614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 4e-22; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 42678836 - 42678759
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||    
T  42678836 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgtcactaaatggatgttcaaatatcatttctcta 42678759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 42866837 - 42866762
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||| ||||||||| ||| |||||||||||||||||||||||||| ||||| | ||||||||||||||||||    
T  42866837 agagagataaagtaaaaaataatgtgagtatgagagaaaaagttgtcacaaaatggacgttcaaatatcatttctc 42866762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 26277182 - 26277105
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||| ||||||||| ||| |||||||| ||||| ||||||||||| ||||| ||||||||||||||||||||||    
T  26277182 agagagataaagtaaaaaataatgtgagtataagagagaaagttgtcactaaatggatgttcaaatatcatttctcta 26277105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 10711811 - 10711735
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||| ||||||||||||| |||||||||||||| ||| ||||||| ||||  |||||||||||||||||||||    
T  10711811 agagagataaagtaaaaagtaatgtgagtatgagagagaaaattgtcacaaaatagatgttcaaatatcatttctct 10711735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 3012832 - 3012906
Alignment:
Q  8 agagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||| ||||||||| ||| || ||||||||||| ||||||||||| ||||| |||||||||||||||||||||    
T  3012832 agagataaagtaaaaaataatgtaagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctct 3012906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 40937048 - 40937124
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||| ||||||||| ||| |||||||||||||| |||||| |||| ||||| |||||||||| ||||||||||    
T  40937048 agagagataaagtaaaaaataatgtgagtatgagagagaaagttatcacaaaatggatgttcaaatgtcatttctct 40937124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 6646887 - 6646834
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||||| ||||||||||| ||||| |||||||||||||||||||||    
T  6646887 gtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctct 6646834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 93
Target Start/End: Original strand, 23352891 - 23352976
Alignment:
Q  8 agagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctctaatagaaaata 93  Q
    |||||| ||||||||| ||| |||||||||||||| ||||||||||| |||||  ||||||| ||||||||||  |||| ||||||    
T  23352891 agagataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaatggctgttcaagtatcatttctaaaataaaaaata 23352976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 6170717 - 6170669
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||    
T  6170717 agagagataaagtaaaaagtaacgtgagtatgagagagaaagttgtcac 6170669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 80
Target Start/End: Complemental strand, 9377543 - 9377469
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttct 80  Q
    |||||||| ||||||||||||| |||| ||||||||| |||||| |||| ||||| | |||| ||||||||||||    
T  9377543 agagagataaagtaaaaagtaatgtgaatatgagagagaaagttatcacaaaatggacgttcgaatatcatttct 9377469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 54
Target Start/End: Original strand, 9634422 - 9634468
Alignment:
Q  8 agagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||    
T  9634422 agagataaagtaaaaagtaatgtgagtatgagagaaaaagttgtcac 9634468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 29712065 - 29712012
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaat 59  Q
    |||||||| ||||||||||||| ||||||||||||||||| |||||||| ||||    
T  29712065 agagagataaagtaaaaagtaatgtgagtatgagagaaaaggttgtcacaaaat 29712012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 32972914 - 32972963
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcattt 78  Q
    |||||||||||||| ||||||||||| ||||| |||||||||||||||||    
T  32972914 gtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcattt 32972963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 41569380 - 41569425
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||    
T  41569380 agagagataaagtaaaaagtaacgtgagtatgagagagaaagttgt 41569425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 42372567 - 42372494
Alignment:
Q  6 agagagatgaagtaaaaag-taacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcattt 78  Q
    |||||||| |||||||||  ||| |||||||||||||| ||||||||||| ||||  |||||||||||||||||    
T  42372567 agagagataaagtaaaaaaataatgtgagtatgagagagaaagttgtcactaaatagatgttcaaatatcattt 42372494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 2971823 - 2971875
Alignment:
Q  30 tgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||||||||| ||||||||||| ||||| ||||||||||||| |||||||    
T  2971823 tgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcttttctct 2971875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 6999052 - 6999100
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  6999052 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcac 6999100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 36212044 - 36212115
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcattt 78  Q
    |||||||| ||||||||| ||| |||||||||| ||| ||||||||||| ||||| ||||||| |||||||||    
T  36212044 agagagataaagtaaaaa-taatgtgagtatgaaagataaagttgtcacaaaatggatgttcagatatcattt 36212115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 37966419 - 37966364
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    |||||||||||||||||||||||||| || ||  ||| ||||||||||||||||||    
T  37966419 gtgagtatgagagaaaaagttgtcacaaattggttgtacaaatatcatttctctaa 37966364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 78
Target Start/End: Original strand, 4299556 - 4299594
Alignment:
Q  40 agaaaaagttgtcaccaaatgaatgttcaaatatcattt 78  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  4299556 agaaaaagttgtcacaaaatgaatgttcaaatatcattt 4299594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 20911839 - 20911801
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  20911839 aaaagttgttaccaaatgaatgttcaaatatcatttctc 20911801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 22353183 - 22353237
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||||||| | ||||||||||| |||||| ||| |||||||||||||||||    
T  22353183 gtgagtatgagaaagaaagttgtcacaaaatgattgtacaaatatcatttctcta 22353237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 13347799 - 13347844
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| |||||||||||||| ||||||||    
T  13347799 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgt 13347844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 33737337 - 33737394
Alignment:
Q  25 taacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||||||||| ||| ||||||| |||||   |||||||||||||||||||    
T  33737337 taacgtgagtatgagagagaaatttgtcacaaaatggtagttcaaatatcatttctct 33737394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Complemental strand, 37257487 - 37257442
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctctaataga 88  Q
    |||||||||||| ||||| |||||||||||||||||||| ||||||    
T  37257487 aaaagttgtcactaaatggatgttcaaatatcatttctcaaataga 37257442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 80
Target Start/End: Complemental strand, 1836050 - 1836014
Alignment:
Q  44 aaagttgtcaccaaatgaatgttcaaatatcatttct 80  Q
    ||||||||||| |||||||||||||||||||||||||    
T  1836050 aaagttgtcacaaaatgaatgttcaaatatcatttct 1836014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 13765483 - 13765439
Alignment:
Q  10 agatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||| |||||||||||||| ||||||||||||| |||||||||||    
T  13765483 agataaagtaaaaagtaacatgagtatgagagagaaagttgtcac 13765439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 25881631 - 25881583
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||| ||| |||||||||||||| |||||||||||    
T  25881631 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgtcac 25881583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 28245815 - 28245767
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||| ||| |||||||||||||| |||||||||||    
T  28245815 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgtcac 28245767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 35589420 - 35589460
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  35589420 aaaagttgtcacaaaatggatgttcaaatatcatttctcta 35589460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 39449150 - 39449190
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  39449150 aaaagttgtcacaaaatggatgttcaaatatcatttctcta 39449190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 670500 - 670539
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  670500 aaaagttgtcactaaatggatgttcaaatatcatttctct 670539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 84
Target Start/End: Complemental strand, 15141525 - 15141470
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    |||||||||||||| ||||||||||  ||||  |||| ||||||||||||||||||    
T  15141525 gtgagtatgagagagaaagttgtcataaaatagatgtacaaatatcatttctctaa 15141470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 81
Target Start/End: Original strand, 19316593 - 19316636
Alignment:
Q  38 agagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    ||||||||||||||||| |||||| | |||||||||||||||||    
T  19316593 agagaaaaagttgtcacaaaatgattattcaaatatcatttctc 19316636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 28679354 - 28679315
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  28679354 aaaagttgtcaccaaatggatgttcaaatattatttctct 28679315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 30977927 - 30977888
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  30977927 aaaagttgtcacaaaatggatgttcaaatatcatttctct 30977888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 36802934 - 36802895
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  36802934 aaaagttgtcacaaaatggatgttcaaatatcatttctct 36802895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 44254637 - 44254598
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  44254637 aaaagttgtcacagaatgaatgttcaaatatcatttctct 44254598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 84
Target Start/End: Original strand, 285478 - 285532
Alignment:
Q  30 tgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    |||||||| |||| ||||||||  | |||||||||| ||||||||||||||||||    
T  285478 tgagtatgcgagagaaagttgttccaaaatgaatgtacaaatatcatttctctaa 285532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 29051686 - 29051724
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  29051686 aaaagttgtcactaaatggatgttcaaatatcatttctc 29051724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 34119636 - 34119682
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtc 52  Q
    |||||||| ||||||||| ||| |||||||||||||| |||||||||    
T  34119636 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgtc 34119682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 37737975 - 37738036
Alignment:
Q  19 aaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    ||||||||| |||||||||||||| |||||||||   |||||  |||||||||||||||||||    
T  37737975 aaaaagtaatgtgagtatgagagagaaagttgtc-gaaaatggttgttcaaatatcatttctc 37738036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 29684600 - 29684641
Alignment:
Q  10 agatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||| ||||||||||||| |||||||||||||| ||||||||    
T  29684600 agataaagtaaaaagtaaggtgagtatgagagagaaagttgt 29684641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 29795499 - 29795446
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||||| |||| ||||||||||| |||||  ||| ||||||||||||||||    
T  29795499 gtgagtatgtgagagaaagttgtcacaaaatggttgtacaaatatcatttctct 29795446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 31578522 - 31578473
Alignment:
Q  6 agagagatgaagtaaaa-agtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| |||||||| | ||| ||||||||||||||||||||||||||    
T  31578522 agagagataaagtaaaagaataatgtgagtatgagagaaaaagttgtcac 31578473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 36802983 - 36802938
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||    
T  36802983 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgt 36802938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 39213754 - 39213799
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||    
T  39213754 agagagataaagtaaaaaataatgtgagtatgagagataaagttgt 39213799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 39449354 - 39449309
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| |||||||||||||  ||||||||||||| ||||||||    
T  39449354 agagagataaagtaaaaagtaatctgagtatgagagagaaagttgt 39449309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 41042341 - 41042292
Alignment:
Q  6 agagagatgaagtaaaaag-taacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||  |||||||||| ||| ||||||||||||||||||||||||||    
T  41042341 agagagagaaagtaaaaagataatgtgagtatgagagaaaaagttgtcac 41042292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 42607538 - 42607591
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||||| ||| ||||||| |||| | ||| ||||||||||||||||    
T  42607538 gtgagtatgagagagaaaattgtcacaaaataattgtacaaatatcatttctct 42607591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 1416023 - 1416071
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| || |||||||||| || ||||||||||||||| |||||||    
T  1416023 agagagataaattaaaaagtaatgtaagtatgagagaaaaaattgtcac 1416071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Complemental strand, 4753196 - 4753160
Alignment:
Q  45 aagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  4753196 aagttatcaccaaatggatgttcaaatatcatttctc 4753160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 5054695 - 5054647
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| |||||| |  ||| ||||||||||||||||||||||||||    
T  5054695 agagagataaagtaacacataatgtgagtatgagagaaaaagttgtcac 5054647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 12498620 - 12498668
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| || |||||| |||  |||||||||||||||||||||||||    
T  12498620 agagagataaaataaaaaataatatgagtatgagagaaaaagttgtcac 12498668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 12498669 - 12498709
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||| |||| |||||||| ||||||||||||||||||||||    
T  12498669 aaaaattgttaccaaatggatgttcaaatatcatttctcta 12498709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 14233703 - 14233751
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| |||||||||||||  ||||||||||||| ||| |||||||    
T  14233703 agagagataaagtaaaaagtaatatgagtatgagagagaaatttgtcac 14233751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 79
Target Start/End: Original strand, 14233752 - 14233788
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttc 79  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  14233752 aaaagttgtcacaaaatggatgttcaaatatcatttc 14233788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 15269948 - 15269900
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||||||| |||| ||||| ||| |||||||||||    
T  15269948 agagagataaagtaaaaagtaatgtgaatatgaaagagaaagttgtcac 15269900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 18176978 - 18176938
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||||||| ||||  ||||||||||||||||||||||    
T  18176978 aaaagttgtcactaaatagatgttcaaatatcatttctcta 18176938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Original strand, 25801821 - 25801873
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||||| ||||||||||| || ||  ||| |||||||||||||||    
T  25801821 gtgagtatgagagataaagttgtcacaaattggttgtacaaatatcatttctc 25801873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 35589371 - 35589407
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagaga 42  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  35589371 agagagataaagtaaaaagtaatgtgagtatgagaga 35589407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 38600877 - 38600825
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||||| ||||||||||  ||||| |||| || ||||||||||||    
T  38600877 gtgagtatgagagagaaagttgtcaaaaaatggatgtacatatatcatttctc 38600825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 30439490 - 30439566
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||||| ||||| |||||||||||||||||||||    
T  30439490 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctct 30439566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 42569715 - 42569790
Alignment:
Q  8 agagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||| ||||||||||||| |||| ||||||||| ||||||||||  ||||||||||||||||||||||||||||    
T  42569715 agagataaagtaaaaagtaatgtgaatatgagagagaaagttgtcataaaatgaatgttcaaatatcatttctcta 42569790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 83
Target Start/End: Original strand, 7586146 - 7586223
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||| ||||||||| ||| |||||||||| | | ||||||||||||||||  ||||||||||||||||||||||    
T  7586146 agagagataaagtaaaaaataatgtgagtatgaaaaagaaagttgtcaccaaatagatgttcaaatatcatttctcta 7586223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 41541944 - 41541868
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||| || |||||| ||| |||||||| ||||| ||||||||||| ||||| |||||||||||||||||||||    
T  41541944 agagagataaaataaaaaataatgtgagtataagagagaaagttgtcacaaaatggatgttcaaatatcatttctct 41541868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 6968230 - 6968292
Alignment:
Q  19 aaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    ||||||||| |||||||||||||| ||||||||||||| ||  ||||||||||||||||||||    
T  6968230 aaaaagtaatgtgagtatgagagagaaagttgtcaccagattgatgttcaaatatcatttctc 6968292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 37657053 - 37657000
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||||| ||||||||||| ||||| |||||||||||||||||||||    
T  37657053 gtgagtatgagagagaaagttgtcactaaatggatgttcaaatatcatttctct 37657000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 20174752 - 20174686
Alignment:
Q  15 aagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||| |||||||||||| ||| ||||    
T  20174752 aagtaaaaa-taatgtgagtatgagataaaaagttgtcaccaaatggatgttcaaatatgattactct 20174686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 82
Target Start/End: Complemental strand, 20219479 - 20219413
Alignment:
Q  15 aagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||| |||||||||||| ||| ||||    
T  20219479 aagtaaaaa-taatgtgagtatgagataaaaagttgtcaccaaatggatgttcaaatatgattactct 20219413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 22706225 - 22706300
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||| |||| ||||  || |||||||||||||| ||||||||||| ||||| || |||||||||||||||||    
T  22706225 agagagataaagttaaaaacaatgtgagtatgagagataaagttgtcactaaatggatattcaaatatcatttctc 22706300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 32954904 - 32954839
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctctaatagaaaatag 94  Q
    |||||||| ||||| ||||||||||| ||||| ||||||||||||||||||| ||  |||||||||    
T  32954904 gtgagtatcagagagaaagttgtcacaaaatggatgttcaaatatcatttctttatcagaaaatag 32954839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 40413353 - 40413410
Alignment:
Q  25 taacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||||||||| ||||||||||| |||| | ||| ||||||||||||||||    
T  40413353 taacgtgagtatgagagagaaagttgtcacaaaataattgtacaaatatcatttctct 40413410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 4658247 - 4658295
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||||||| || |||||||||||||||||||||||    
T  4658247 agagagataaagtaaaaagtaatgtaagtatgagagaaaaagttgtcac 4658295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 81
Target Start/End: Original strand, 35356179 - 35356227
Alignment:
Q  33 gtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||| |||||| |||| ||||||||||||||||||||||||||    
T  35356179 gtatgagagagaaagttatcacaaaatgaatgttcaaatatcatttctc 35356227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 34 - 78
Target Start/End: Complemental strand, 42886034 - 42885990
Alignment:
Q  34 tatgagagaaaaagttgtcaccaaatgaatgttcaaatatcattt 78  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||    
T  42886034 tatgagagagaaagttgtcaccaaatggatgttcaaatatcattt 42885990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 29440555 - 29440594
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  29440555 aaaagttatcaccaaatgaatgttcaaatatcatttctct 29440594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 3946278 - 3946236
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctctaat 85  Q
    |||||||||||| ||||| ||||||||||||||||||||||||    
T  3946278 aaaagttgtcacaaaatggatgttcaaatatcatttctctaat 3946236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 7592887 - 7592849
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  7592887 aaaagttgtcactaaatgaatgttcaaatatcatttctc 7592849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 12707236 - 12707190
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtc 52  Q
    |||||||| || ||||||||||||||||||||||||| |||||||||    
T  12707236 agagagataaattaaaaagtaacgtgagtatgagagagaaagttgtc 12707190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 12898913 - 12898967
Alignment:
Q  6 agagagatgaagtaaaaag-taacgtgagtatgagagaaaaagttgtcaccaaat 59  Q
    |||||||| |||||||||| ||| |||||||||||||||||||||||||| ||||    
T  12898913 agagagataaagtaaaaagataatgtgagtatgagagaaaaagttgtcacaaaat 12898967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 16327136 - 16327182
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtc 52  Q
    |||||||| ||||||||||||| |||||||||||||| |||||||||    
T  16327136 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgtc 16327182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 7955991 - 7956036
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| |||||||||||||| ||||||||    
T  7955991 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgt 7956036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 78
Target Start/End: Original strand, 14710901 - 14710950
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcattt 78  Q
    |||||||||||||| ||||||||||| |||||| ||| ||||||||||||    
T  14710901 gtgagtatgagagagaaagttgtcacaaaatgattgtacaaatatcattt 14710950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 16613721 - 16613676
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||| ||| |||||||||||||||||||||||    
T  16613721 agagagataaagtaaaaaataatgtgagtatgagagaaaaagttgt 16613676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 17775462 - 17775503
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  17775462 aaaagttgtcacaaaatgattgttcaaatatcatttctctaa 17775503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 28646735 - 28646686
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcattt 78  Q
    |||||||||||||| |||||||||| |||||  |||||||||||||||||    
T  28646735 gtgagtatgagagagaaagttgtcatcaaatagatgttcaaatatcattt 28646686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 28651319 - 28651270
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcattt 78  Q
    |||||||||||||| |||||||||| |||||  |||||||||||||||||    
T  28651319 gtgagtatgagagagaaagttgtcatcaaatagatgttcaaatatcattt 28651270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 83
Target Start/End: Complemental strand, 36531630 - 36531593
Alignment:
Q  46 agttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  36531630 agttgtcaccaaatggatgttcaaatatcatttctcta 36531593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 2733074 - 2733027
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||| ||| ||||||||||||||||||||||||||    
T  2733074 agagagataaagtaaaaa-taatgtgagtatgagagaaaaagttgtcac 2733027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 7473010 - 7473054
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttg 50  Q
    |||||||| ||||||||||||| |||||||||||||| |||||||    
T  7473010 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttg 7473054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 16966823 - 16966783
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  16966823 aaaagttgtcactaaatggatgttcaaatatcatttctcta 16966783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 31597035 - 31596987
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||||||| |||||||||||||| | |||||||||    
T  31597035 agagagataaagtaaaaagtaatgtgagtatgagagagagagttgtcac 31596987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 84
Target Start/End: Original strand, 32843974 - 32844014
Alignment:
Q  44 aaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    ||||||||||| |||||||||||||||||| ||||||||||    
T  32843974 aaagttgtcactaaatgaatgttcaaatataatttctctaa 32844014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 41159873 - 41159921
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||| ||| |||||||||||||| |||||||||||    
T  41159873 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgtcac 41159921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 80
Target Start/End: Complemental strand, 39211105 - 39211054
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttct 80  Q
    |||||||||||||| ||||||||||  |||||  ||||||||||||||||||    
T  39211105 gtgagtatgagagagaaagttgtcaaaaaatggttgttcaaatatcatttct 39211054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 41600347 - 41600308
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||  |||||||||||||||||||||||||||    
T  41600347 aaaagttgtcaataaatgaatgttcaaatatcatttctct 41600308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 1633923 - 1633961
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  1633923 aaaagttgtcactaaatggatgttcaaatatcatttctc 1633961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 7010737 - 7010683
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||||||||| ||| ||||||  |||||| ||| |||||||||||||||||    
T  7010737 gtgagtatgagagagaaaattgtcaaaaaatgattgtacaaatatcatttctcta 7010683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 14707377 - 14707415
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  14707377 aaaagttgtcaaaaaatgaatgttcaaatatcatttctc 14707415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 16872189 - 16872227
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  16872189 aaaagttgtcacaaaatggatgttcaaatatcatttctc 16872227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 29991450 - 29991412
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  29991450 aaaagttgtcacaaaatggatgttcaaatatcatttctc 29991412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 34718153 - 34718115
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  34718153 aaaagttgtcacaaaatggatgttcaaatatcatttctc 34718115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 87
Target Start/End: Original strand, 37392136 - 37392194
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctctaatag 87  Q
    |||||||||||||| ||||||||||  |||||  ||| |||||||||||||||| ||||    
T  37392136 gtgagtatgagagagaaagttgtcaaaaaatggttgtacaaatatcatttctcttatag 37392194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 41639782 - 41639860
Alignment:
Q  5 gagagagatgaagtaaaaag-taacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||||  |||||||||  ||| |||||||||||||||||| |||| |  ||||| |||| ||||||||||||||||    
T  41639782 gagagagagaaagtaaaaatataatgtgagtatgagagaaaaaattgttagaaaatggatgtacaaatatcatttctct 41639860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 85
Target Start/End: Complemental strand, 44607747 - 44607697
Alignment:
Q  35 atgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctctaat 85  Q
    |||||||| |||||||||||||||||  ||| |||||||||||||| ||||    
T  44607747 atgagagagaaagttgtcaccaaatggttgtacaaatatcatttctttaat 44607697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 83
Target Start/End: Original strand, 45405827 - 45405881
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||||||||||||||||||  | |||||  ||| |||||||||||||||||    
T  45405827 gtgagtatgagagaaaaagttgtatcaaaatggttgtacaaatatcatttctcta 45405881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 45529279 - 45529317
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||| ||||||| ||||||||||||||||||||||||||    
T  45529279 aaaaattgtcactaaatgaatgttcaaatatcatttctc 45529317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 1633874 - 1633919
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||    
T  1633874 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgt 1633919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 5740793 - 5740846
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||||||||||||||||  || ||  ||| ||||||||||||||||    
T  5740793 gtgagtatgagagaaaaagttgtcaaaaagtggttgtacaaatatcatttctct 5740846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 84
Target Start/End: Original strand, 9549232 - 9549273
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    |||||||||||| ||||| ||||||||||||||||| |||||    
T  9549232 aaaagttgtcacaaaatggatgttcaaatatcatttttctaa 9549273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 11017892 - 11017847
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||    
T  11017892 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgt 11017847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 11657984 - 11658029
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| || |||||||||| |||||||||||||| ||||||||    
T  11657984 agagagataaaataaaaagtaatgtgagtatgagagagaaagttgt 11658029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 16872140 - 16872185
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| |||||||||| ||| ||||||||    
T  16872140 agagagataaagtaaaaagtaatgtgagtatgatagagaaagttgt 16872185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 80
Target Start/End: Complemental strand, 34591300 - 34591263
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttct 80  Q
    ||||||||| || |||||||||||||||||||||||||    
T  34591300 aaaagttgtgactaaatgaatgttcaaatatcatttct 34591263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 34718202 - 34718157
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||    
T  34718202 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgt 34718157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 37783955 - 37784000
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| |||||||||||||  ||||||||||||| ||||||||    
T  37783955 agagagataaagtaaaaagtaatctgagtatgagagagaaagttgt 37784000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 42443142 - 42443101
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    |||||||||||| |||||| ||| ||||||||||||||||||    
T  42443142 aaaagttgtcactaaatgattgtacaaatatcatttctctaa 42443101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 45529230 - 45529275
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||    
T  45529230 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgt 45529275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 4672029 - 4671981
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctctaatagaaaa 91  Q
    |||||||||||  |||||  |||||||||||| ||||||||||||||||    
T  4672029 aaaagttgtcaaaaaatggttgttcaaatatcgtttctctaatagaaaa 4671981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 4994468 - 4994420
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||| ||| |||||||||||||| |||||| ||||    
T  4994468 agagagataaagtaaaaaataatgtgagtatgagagataaagttatcac 4994420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 83
Target Start/End: Complemental strand, 8645195 - 8645163
Alignment:
Q  51 tcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||||| ||||||||||||||||||||||    
T  8645195 tcaccaaatggatgttcaaatatcatttctcta 8645163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 9549183 - 9549231
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||| ||| |||||||||||||| ||| |||||||    
T  9549183 agagagataaagtaaaaaataatgtgagtatgagagagaaaattgtcac 9549231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 30136048 - 30136088
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||||||  |||| |||||||||||||||||||||||    
T  30136048 aaaagttgtcattaaataaatgttcaaatatcatttctcta 30136088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 36064068 - 36064028
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||||||| |||||| ||| |||||||||||||||||    
T  36064068 aaaagttgtcacaaaatgattgtacaaatatcatttctcta 36064028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 36531682 - 36531634
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||| |||  ||||||||| |||||||||||||||    
T  36531682 agagagataaagtaaaaaataatatgagtatgaaagaaaaagttgtcac 36531634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 54
Target Start/End: Original strand, 37449418 - 37449458
Alignment:
Q  15 aagtaaaaag-taacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||||| ||| ||||||||||||||||||||||||||    
T  37449418 aagtaaaaagataatgtgagtatgagagaaaaagttgtcac 37449458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 38234094 - 38234046
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||| | | |||||||||||||| |||||||||||    
T  38234094 agagagataaagtaaaaaattatgtgagtatgagagagaaagttgtcac 38234046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 4e-19; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 15953029 - 15953105
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||| ||||||||| |||  ||||||||||||||||||||||||| ||||  |||||||||||||||||||||    
T  15953029 agagagataaagtaaaaaataatatgagtatgagagaaaaagttgtcacaaaatagatgttcaaatatcatttctct 15953105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 1839333 - 1839401
Alignment:
Q  10 agatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcattt 78  Q
    |||| ||||||||| ||| |||||||||||||| ||||||||||| ||||| |||||||||||||||||    
T  1839333 agataaagtaaaaaataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcattt 1839401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 9226387 - 9226312
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||||  ||||| |||||||||||||||||||||    
T  9226387 agagagataaagtaaaaa-taatgtgagtatgagagagaaagttgtcattaaatggatgttcaaatatcatttctct 9226312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 81
Target Start/End: Complemental strand, 42267433 - 42267357
Alignment:
Q  6 agagagatgaagtaaaaag-taacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||| |||||||||  ||| ||| |||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  42267433 agagagataaagtaaaaatataatgtgtgtatgagagaaaaagttgtcactaaatgaatgatcaaatatcatttctc 42267357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 82
Target Start/End: Original strand, 3640185 - 3640257
Alignment:
Q  10 agatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||| ||||||||| ||| |||||||||||||| ||||||||| | ||||  |||||||||||||||||||||    
T  3640185 agataaagtaaaaaataatgtgagtatgagagagaaagttgtctcaaaatagatgttcaaatatcatttctct 3640257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 34270414 - 34270338
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||| ||||||||| ||| | |||||||||||| ||| ||||||| || || |||||||||||||||||||||    
T  34270414 agagagataaagtaaaaaataatgggagtatgagagagaaaattgtcacaaagtggatgttcaaatatcatttctct 34270338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 189687 - 189735
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  189687 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcac 189735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 6517799 - 6517751
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  6517799 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcac 6517751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 19481166 - 19481214
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  19481166 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcac 19481214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 2224851 - 2224801
Alignment:
Q  32 agtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||||||| ||| ||||||||||||  |||||||||||||||||||||    
T  2224851 agtatgagagataaaattgtcaccaaatagatgttcaaatatcatttctct 2224801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 21064259 - 21064297
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  21064259 aaaagttgtcactaaatgaatgttcaaatatcatttctc 21064297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 8267853 - 8267898
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctctaataga 88  Q
    |||| ||||||| ||||| |||||||||||||||||||||||||||    
T  8267853 aaaaattgtcactaaatggatgttcaaatatcatttctctaataga 8267898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 21136350 - 21136273
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaag-ttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||| ||||||||| |||||||||||||| ||| |||| || |||| ||||  ||||| |||||||||||||||    
T  21136350 agagagataaagtaaaaaataacgtgagtatgaaagagaaagtttatcacaaaatagatgttaaaatatcatttctct 21136273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 43441825 - 43441780
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| |||||||||||||| ||||||||    
T  43441825 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgt 43441780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 6446502 - 6446550
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    ||||| || ||||||||||||| |||||||||||||| |||||||||||    
T  6446502 agagaaataaagtaaaaagtaatgtgagtatgagagagaaagttgtcac 6446550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 8920116 - 8920076
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  8920116 aaaagttgtcacaaaatggatgttcaaatatcatttctcta 8920076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 10649522 - 10649474
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||||||| |||||||||| ||| |||||||||||    
T  10649522 agagagataaagtaaaaagtaatgtgagtatgaaagagaaagttgtcac 10649474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 20770218 - 20770170
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||| ||| |||||||||||||| |||||||||||    
T  20770218 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgtcac 20770170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 22402659 - 22402699
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  22402659 aaaagttgtcacaaaataaatgttcaaatatcatttctcta 22402699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 30640828 - 30640788
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  30640828 aaaagttgtcacaaaatggatgttcaaatatcatttctcta 30640788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 41175690 - 41175738
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||| ||| |||||||||||||| |||||||||||    
T  41175690 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgtcac 41175738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 84
Target Start/End: Original strand, 6865795 - 6865850
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    |||||||||||||| ||||||||||| || ||  ||| ||||||||||||||||||    
T  6865795 gtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctctaa 6865850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 9977157 - 9977118
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  9977157 aaaagttgtcactaaatggatgttcaaatatcatttctct 9977118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 17402955 - 17402994
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||| ||||||||||||| |||||||||||||||||||||    
T  17402955 aaaaattgtcaccaaatggatgttcaaatatcatttctct 17402994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 23126376 - 23126415
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  23126376 aaaagttgtcactaaatggatgttcaaatatcatttctct 23126415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 4430969 - 4431007
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  4430969 aaaagttgtcactaaatggatgttcaaatatcatttctc 4431007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 81
Target Start/End: Complemental strand, 9933538 - 9933500
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||  ||||||||||||||||||||||||||    
T  9933538 aaaagttgtcataaaatgaatgttcaaatatcatttctc 9933500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 37700493 - 37700459
Alignment:
Q  48 ttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||||||||| |||||||||||||||||||||    
T  37700493 ttgtcaccaaatggatgttcaaatatcatttctct 37700459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 42509666 - 42509616
Alignment:
Q  32 agtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||||||||||| ||||||  |||||| |||| |||||||||||||||    
T  42509666 agtatgagagaaaaatttgtcataaaatgattgttaaaatatcatttctct 42509616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 372728 - 372781
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||||| ||||||||||| |||||  ||| |||| |||||||||||    
T  372728 gtgagtatgagagagaaagttgtcacaaaatggttgtacaaaaatcatttctct 372781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 4430920 - 4430965
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||| | | |||||||||||||||||||||||    
T  4430920 agagagataaagtaaaaaatgatgtgagtatgagagaaaaagttgt 4430965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 4434534 - 4434481
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||||||||| ||||||  |||||  ||| ||||||||||||||||    
T  4434534 gtgagtatgagagaaaaaattgtcaaaaaatggttgtacaaatatcatttctct 4434481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 5042335 - 5042290
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||    
T  5042335 agagagataaagtaaaaaataatgtgagtatgagagataaagttgt 5042290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 8675417 - 8675462
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| |||||||||||||| ||| ||||    
T  8675417 agagagataaagtaaaaagtaatgtgagtatgagagagaaaattgt 8675462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 82
Target Start/End: Complemental strand, 14206452 - 14206399
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||||| ||||||||||  |||||  ||| ||||||||||||||||    
T  14206452 gtgagtatgagagagaaagttgtcaaaaaatggttgtacaaatatcatttctct 14206399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 18842305 - 18842350
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||    
T  18842305 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgt 18842350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 31284403 - 31284448
Alignment:
Q  30 tgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatca 75  Q
    ||||||||||||| ||||||||||| ||||| |||| |||||||||    
T  31284403 tgagtatgagagagaaagttgtcacaaaatggatgtacaaatatca 31284448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 35098989 - 35099034
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||    
T  35098989 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgt 35099034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 53
Target Start/End: Complemental strand, 6529086 - 6529058
Alignment:
Q  25 taacgtgagtatgagagaaaaagttgtca 53  Q
    |||||||||||||||||||||||||||||    
T  6529086 taacgtgagtatgagagaaaaagttgtca 6529058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 8267805 - 8267849
Alignment:
Q  7 gagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    ||||||| ||||||||| ||| |||||||||||||| ||||||||    
T  8267805 gagagataaagtaaaaaataatgtgagtatgagagagaaagttgt 8267849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 9581666 - 9581618
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||| ||| |||||||||| ||| |||||||||||    
T  9581666 agagagataaagtaaaaaataatgtgagtatgaaagagaaagttgtcac 9581618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 14324003 - 14324043
Alignment:
Q  45 aagttgtcaccaaatgaatgttcaaatatcatttctctaat 85  Q
    |||||||||| ||||| |||| |||||||||||||||||||    
T  14324003 aagttgtcacaaaatggatgtgcaaatatcatttctctaat 14324043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 19839970 - 19840018
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    ||||| || ||||||||| ||| |||||||||||||| |||||||||||    
T  19839970 agagatataaagtaaaaaataatgtgagtatgagagagaaagttgtcac 19840018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 5028252 - 5028326
Alignment:
Q  8 agagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||| ||||||||||||| |||||||| ||||| ||||||||||| ||||| ||||| |||||||||||||||    
T  5028252 agagataaagtaaaaagtaatgtgagtataagagagaaagttgtcacaaaatggatgtttaaatatcatttctct 5028326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 28041798 - 28041874
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||| |||| ||||  || ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||    
T  28041798 agagagataaagttaaaaacaatgtgagtatgagagaaaaagttgttaccaaatggatgtttaaatatcatttctct 28041874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 30 - 82
Target Start/End: Complemental strand, 28748175 - 28748123
Alignment:
Q  30 tgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||||||||| ||||||||||| ||||| |||||||||||||||||||||    
T  28748175 tgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctct 28748123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 754422 - 754467
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||    
T  754422 agagagataaagtaaaaagtaatgtgagtatgagagaaaaagttgt 754467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 3610945 - 3610990
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||    
T  3610945 agagagataaagtaaaaagtaatgtgagtatgagagaaaaagttgt 3610990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 14699648 - 14699717
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatca 75  Q
    |||||||| ||||||||| ||| |||||||||||| | |||||| |||| ||||| ||||||||||||||    
T  14699648 agagagataaagtaaaaaataatgtgagtatgagaaagaaagttatcacaaaatggatgttcaaatatca 14699717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 14693236 - 14693308
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcattt 78  Q
    |||||||| ||||||||| ||| |||||||| | ||| |||||| |||| ||||| |||||||||||||||||    
T  14693236 agagagataaagtaaaaaataatgtgagtatcaaagagaaagttatcacaaaatggatgttcaaatatcattt 14693308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 18141285 - 18141333
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  18141285 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcac 18141333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 20822852 - 20822900
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  20822852 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgtcac 20822900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 81
Target Start/End: Original strand, 754471 - 754509
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  754471 aaaagttgtcacaaaatgaatgttcaaatatcatttctc 754509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 51 - 93
Target Start/End: Complemental strand, 3198990 - 3198948
Alignment:
Q  51 tcaccaaatgaatgttcaaatatcatttctctaatagaaaata 93  Q
    |||||||||||||||||||||||||||||||||| | ||||||    
T  3198990 tcaccaaatgaatgttcaaatatcatttctctaaaataaaata 3198948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 2060641 - 2060694
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||||||||||||||||  |||||  | ||||||||||||||||||    
T  2060641 gtgagtatgagagaaaaagttgtcataaaatggttattcaaatatcatttctct 2060694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 13143366 - 13143411
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| |||||||||||||| ||||||||    
T  13143366 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgt 13143411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 35213545 - 35213590
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||||||| |||||||||||||| ||||||||    
T  35213545 agagagataaagtaaaaagtaatgtgagtatgagagagaaagttgt 35213590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 30152563 - 30152603
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||||||| ||||||||||||||||||||||| ||||    
T  30152563 aaaagttgtcactaaatgaatgttcaaatatcatttttcta 30152603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 5327625 - 5327664
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  5327625 aaaagttgtcactaaatggatgttcaaatatcatttctct 5327664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Original strand, 15318221 - 15318260
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  15318221 aaaagttgtcacaaaatggatgttcaaatatcatttctct 15318260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 24842406 - 24842367
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||  |||||||||||||||||||||||||||    
T  24842406 aaaagttgtcattaaatgaatgttcaaatatcatttctct 24842367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 33421798 - 33421759
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  33421798 aaaagttgtcacaaaatggatgttcaaatatcatttctct 33421759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 4820289 - 4820247
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctctaat 85  Q
    ||||||| |||| ||||| ||||||||||||||||||||||||    
T  4820289 aaaagttatcactaaatggatgttcaaatatcatttctctaat 4820247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 6531167 - 6531213
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtc 52  Q
    |||||||| ||||||||| ||| |||||||||||||| |||||||||    
T  6531167 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgtc 6531213  T

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Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 85
Target Start/End: Original strand, 20822901 - 20822943
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctctaat 85  Q
    |||||||||||  ||||| ||||||||||||||||||||||||    
T  20822901 aaaagttgtcataaaatggatgttcaaatatcatttctctaat 20822943  T

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Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Original strand, 2075435 - 2075480
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||    
T  2075435 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgt 2075480  T

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Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 4820338 - 4820293
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||    
T  4820338 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgt 4820293  T

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Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 7611532 - 7611495
Alignment:
Q  44 aaagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  7611532 aaagttgtcacaaaatgattgttcaaatatcatttctc 7611495  T

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Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 31517188 - 31517241
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||||||||||||||||  || ||  ||| ||||||||||||||||    
T  31517188 gtgagtatgagagaaaaagttgtcaaaaagtggttgtacaaatatcatttctct 31517241  T

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Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 34504107 - 34504062
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgt 51  Q
    |||||||| |||| |||||||| |||||||||||||| ||||||||    
T  34504107 agagagataaagtgaaaagtaatgtgagtatgagagagaaagttgt 34504062  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 2689049 - 2689096
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||| ||| |||||||||||||| |||||||||||    
T  2689049 agagagataaagtaaaaa-taatgtgagtatgagagagaaagttgtcac 2689096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 2943521 - 2943445
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||| || ||||||||| ||  |||| ||||||| | ||| ||||||  |||| ||||||||||||||||||||||    
T  2943521 agagaaataaagtaaaaaatagtgtgaatatgagaaagaaaattgtcataaaataaatgttcaaatatcatttctct 2943445  T

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Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 6158789 - 6158841
Alignment:
Q  30 tgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||||||||| ||||||||||  || ||||||| || |||||||||||||    
T  6158789 tgagtatgagagataaagttgtcaaaaagtgaatgtacatatatcatttctct 6158841  T

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Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 81
Target Start/End: Original strand, 6531218 - 6531254
Alignment:
Q  45 aagttgtcaccaaatgaatgttcaaatatcatttctc 81  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  6531218 aagttgtcacaaaatggatgttcaaatatcatttctc 6531254  T

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Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 13658919 - 13658871
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||| ||| |||||||||| ||| |||||||||||    
T  13658919 agagagatcaagtaaaaaataatgtgagtatgaaagagaaagttgtcac 13658871  T

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Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 15722535 - 15722575
Alignment:
Q  42 aaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||||||||| |||||| ||| ||||||||||||||||    
T  15722535 aaaaagttgtcacaaaatgattgtacaaatatcatttctct 15722575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 18141334 - 18141374
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||||||  ||||||||||| ||||||||||||||||    
T  18141334 aaaagttgtcataaaatgaatgtttaaatatcatttctcta 18141374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 30036827 - 30036867
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||||||| ||||  ||||||||||||||||||||||    
T  30036827 aaaagttgtcactaaatagatgttcaaatatcatttctcta 30036867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 32046785 - 32046737
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||| ||| |||||||||||||| || ||||||||    
T  32046785 agagagataaagtaaaaaataatgtgagtatgagagagaaggttgtcac 32046737  T

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Target: scaffold0100 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 82
Target Start/End: Complemental strand, 44835 - 44785
Alignment:
Q  32 agtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||||||||| ||||||||||| ||||| |||||||||||||||||||||    
T  44835 agtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctct 44785  T

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Target: scaffold0136 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 38512 - 38464
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| |||||||||||||||||||||||||| | |||||||||||    
T  38512 agagagataaagtaaaaagtaacgtgagtatgagaaagaaagttgtcac 38464  T

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Target: scaffold0136; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 38463 - 38422
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctctaa 84  Q
    |||||||||||  |||||||||||||||||| ||||||||||    
T  38463 aaaagttgtcataaaatgaatgttcaaatattatttctctaa 38422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 11051 - 11003
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||| ||||||||| ||| |||||||||||||| |||||||||||    
T  11051 agagagataaagtaaaaaataatgtgagtatgagagagaaagttgtcac 11003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 19674 - 19634
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    |||||||||||| ||||| ||||||||||||||||||||||    
T  19674 aaaagttgtcactaaatggatgttcaaatatcatttctcta 19634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 8252 - 8213
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    |||||||||||  |||||||||||||||||||||||||||    
T  8252 aaaagttgtcataaaatgaatgttcaaatatcatttctct 8213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 82
Target Start/End: Complemental strand, 22616 - 22577
Alignment:
Q  43 aaaagttgtcaccaaatgaatgttcaaatatcatttctct 82  Q
    ||||| |||||| |||||||||||||||||||||||||||    
T  22616 aaaagctgtcacaaaatgaatgttcaaatatcatttctct 22577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 31608 - 31670
Alignment:
Q  29 gtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctctaatagaaaa 91  Q
    |||||||||||||| ||||||||||  |||||  ||| |||||||||||||||| | ||||||    
T  31608 gtgagtatgagagagaaagttgtcaaaaaatggttgtacaaatatcatttctcttaaagaaaa 31670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0416 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0416
Description:

Target: scaffold0416; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 6945 - 6897
Alignment:
Q  6 agagagatgaagtaaaaagtaacgtgagtatgagagaaaaagttgtcac 54  Q
    |||||||  ||||||||| ||| |||||||||||||| |||||||||||    
T  6945 agagagagaaagtaaaaaataatgtgagtatgagagataaagttgtcac 6897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 73053 - 73117
Alignment:
Q  19 aaaaagtaacgtgagtatgagagaaaaagttgtcaccaaatgaatgttcaaatatcatttctcta 83  Q
    ||||| |||||||| ||||||||| ||||||||||| ||||   |||  ||||||||||||||||    
T  73053 aaaaaataacgtgaatatgagagataaagttgtcacaaaatagttgtcaaaatatcatttctcta 73117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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