View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3489_low_21 (Length: 250)

Name: NF3489_low_21
Description: NF3489
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3489_low_21
NF3489_low_21
[»] chr8 (46 HSPs)
chr8 (13-76)||(18028843-18028906)
chr8 (167-250)||(26631805-26631888)
chr8 (167-250)||(30470471-30470554)
chr8 (167-250)||(8449686-8449770)
chr8 (167-250)||(35101733-35101816)
chr8 (13-76)||(36913079-36913142)
chr8 (167-250)||(34954985-34955069)
chr8 (166-206)||(4625176-4625216)
chr8 (167-250)||(13817387-13817471)
chr8 (167-250)||(18028996-18029082)
chr8 (167-250)||(36912904-36912988)
chr8 (13-76)||(4625023-4625086)
chr8 (167-206)||(5736403-5736442)
chr8 (13-68)||(13817561-13817616)
chr8 (167-206)||(26748611-26748650)
chr8 (166-250)||(42861032-42861118)
chr8 (167-250)||(43617879-43617964)
chr8 (170-250)||(5214133-5214214)
chr8 (27-76)||(43617739-43617788)
chr8 (167-206)||(12272111-12272150)
chr8 (167-206)||(31129102-31129141)
chr8 (13-76)||(35101906-35101969)
chr8 (167-206)||(42860305-42860344)
chr8 (167-206)||(45100674-45100713)
chr8 (168-206)||(30289415-30289453)
chr8 (27-76)||(26631675-26631724)
chr8 (27-76)||(30470333-30470382)
chr8 (168-205)||(39810709-39810746)
chr8 (166-206)||(231736-231776)
chr8 (166-206)||(708147-708187)
chr8 (166-206)||(745359-745399)
chr8 (166-206)||(869254-869294)
chr8 (166-206)||(26414590-26414630)
chr8 (20-68)||(26748475-26748523)
chr8 (167-206)||(1633069-1633108)
chr8 (171-206)||(1954904-1954939)
chr8 (13-68)||(8449531-8449586)
chr8 (167-206)||(13783838-13783877)
chr8 (167-206)||(15056964-15057003)
chr8 (168-206)||(41477579-41477617)
chr8 (27-76)||(5214302-5214351)
chr8 (168-205)||(8607924-8607961)
chr8 (217-250)||(26414539-26414572)
chr8 (13-66)||(42861218-42861271)
chr8 (167-206)||(17744960-17744997)
chr8 (166-206)||(23550123-23550163)
[»] chr4 (55 HSPs)
chr4 (167-250)||(40596414-40596497)
chr4 (167-250)||(46914190-46914274)
chr4 (167-250)||(2211996-2212080)
chr4 (167-250)||(7401515-7401600)
chr4 (167-250)||(27141860-27141945)
chr4 (166-250)||(47749727-47749812)
chr4 (167-250)||(36658778-36658862)
chr4 (13-76)||(21654353-21654416)
chr4 (168-206)||(55408218-55408256)
chr4 (27-68)||(7401698-7401739)
chr4 (166-250)||(53181131-53181216)
chr4 (168-204)||(55598-55634)
chr4 (167-250)||(10090090-10090174)
chr4 (167-206)||(3529908-3529947)
chr4 (167-206)||(3614899-3614938)
chr4 (167-206)||(8995136-8995175)
chr4 (10-76)||(12159255-12159322)
chr4 (167-206)||(13113913-13113952)
chr4 (167-206)||(16021222-16021261)
chr4 (167-206)||(16171542-16171581)
chr4 (167-206)||(21654502-21654541)
chr4 (167-206)||(28901499-28901538)
chr4 (167-206)||(31336182-31336221)
chr4 (168-247)||(39048704-39048783)
chr4 (167-206)||(48506245-48506284)
chr4 (167-206)||(56054630-56054669)
chr4 (167-201)||(12159129-12159163)
chr4 (167-205)||(19409864-19409902)
chr4 (168-206)||(21047596-21047634)
chr4 (14-68)||(31848299-31848353)
chr4 (167-205)||(31848453-31848491)
chr4 (168-206)||(38173922-38173960)
chr4 (27-76)||(10090266-10090315)
chr4 (27-68)||(27141721-27141762)
chr4 (168-201)||(33527082-33527115)
chr4 (168-205)||(39113432-39113469)
chr4 (27-76)||(40596276-40596325)
chr4 (27-76)||(47749596-47749645)
chr4 (166-206)||(34198907-34198947)
chr4 (13-76)||(2211844-2211907)
chr4 (167-206)||(23389622-23389661)
chr4 (167-206)||(28447607-28447646)
chr4 (167-206)||(33077508-33077547)
chr4 (167-206)||(33607388-33607427)
chr4 (167-206)||(34463189-34463228)
chr4 (168-203)||(39532831-39532866)
chr4 (167-206)||(45081128-45081167)
chr4 (167-206)||(55549703-55549742)
chr4 (167-204)||(17329554-17329591)
chr4 (217-250)||(21654554-21654587)
chr4 (168-205)||(32463682-32463719)
chr4 (27-76)||(46914050-46914099)
chr4 (173-206)||(53347344-53347377)
chr4 (174-206)||(18469011-18469043)
chr4 (170-206)||(52773273-52773309)
[»] chr1 (43 HSPs)
chr1 (167-250)||(37646089-37646172)
chr1 (167-250)||(27629992-27630076)
chr1 (167-250)||(31471524-31471608)
chr1 (167-250)||(37419876-37419960)
chr1 (167-250)||(44450917-44451001)
chr1 (166-250)||(45242388-45242473)
chr1 (167-250)||(44651411-44651495)
chr1 (13-68)||(643348-643403)
chr1 (167-206)||(8464948-8464987)
chr1 (167-206)||(2474774-2474813)
chr1 (167-206)||(8471594-8471633)
chr1 (167-206)||(10265684-10265723)
chr1 (167-206)||(17786627-17786666)
chr1 (167-206)||(19578562-19578601)
chr1 (13-76)||(27629839-27629902)
chr1 (13-76)||(37419722-37419785)
chr1 (10-76)||(37645932-37645999)
chr1 (167-206)||(37690946-37690985)
chr1 (167-206)||(45623181-45623220)
chr1 (167-206)||(51156335-51156374)
chr1 (167-206)||(51494124-51494163)
chr1 (167-206)||(52930344-52930383)
chr1 (167-205)||(643502-643540)
chr1 (167-205)||(17675995-17676033)
chr1 (168-206)||(20584473-20584511)
chr1 (168-206)||(48927257-48927295)
chr1 (168-205)||(3754708-3754745)
chr1 (27-68)||(17786758-17786799)
chr1 (27-76)||(52930214-52930263)
chr1 (166-206)||(33167596-33167636)
chr1 (170-206)||(36231305-36231341)
chr1 (167-206)||(29524285-29524324)
chr1 (167-206)||(29919750-29919789)
chr1 (167-206)||(43739412-43739451)
chr1 (167-206)||(45363862-45363901)
chr1 (167-202)||(48384829-48384864)
chr1 (166-205)||(51523649-51523688)
chr1 (167-205)||(37822984-37823022)
chr1 (168-206)||(39149524-39149562)
chr1 (217-250)||(17786581-17786614)
chr1 (173-206)||(30878290-30878323)
chr1 (27-76)||(31471698-31471747)
chr1 (168-205)||(44334661-44334698)
[»] chr3 (68 HSPs)
chr3 (166-250)||(25450133-25450218)
chr3 (167-250)||(5844672-5844756)
chr3 (167-250)||(17469752-17469836)
chr3 (167-250)||(47147609-47147693)
chr3 (13-76)||(25449989-25450052)
chr3 (13-76)||(37409983-37410046)
chr3 (167-250)||(49086473-49086556)
chr3 (166-250)||(25787408-25787493)
chr3 (166-250)||(25829365-25829450)
chr3 (166-250)||(42598063-42598148)
chr3 (167-206)||(42602251-42602290)
chr3 (167-250)||(50020334-50020415)
chr3 (167-206)||(50034673-50034712)
chr3 (168-206)||(28410775-28410813)
chr3 (168-206)||(35852893-35852931)
chr3 (168-206)||(43022984-43023022)
chr3 (168-205)||(46572610-46572647)
chr3 (166-206)||(33934895-33934935)
chr3 (13-76)||(49822446-49822510)
chr3 (167-206)||(4873807-4873846)
chr3 (13-76)||(5844519-5844582)
chr3 (167-206)||(6044982-6045021)
chr3 (168-203)||(15493431-15493466)
chr3 (167-206)||(26162189-26162228)
chr3 (167-206)||(30415111-30415150)
chr3 (167-206)||(32120088-32120127)
chr3 (167-206)||(33751694-33751733)
chr3 (13-68)||(33751824-33751879)
chr3 (167-206)||(37182718-37182757)
chr3 (167-206)||(37410138-37410177)
chr3 (167-206)||(38571797-38571836)
chr3 (167-206)||(41183652-41183691)
chr3 (167-206)||(44084690-44084729)
chr3 (167-206)||(49356939-49356978)
chr3 (167-206)||(50734397-50734436)
chr3 (167-206)||(50778419-50778458)
chr3 (166-250)||(51435962-51436048)
chr3 (167-206)||(51998890-51998929)
chr3 (167-206)||(55027144-55027183)
chr3 (168-206)||(49146972-49147010)
chr3 (168-206)||(49710155-49710193)
chr3 (168-206)||(53722873-53722911)
chr3 (167-204)||(7520781-7520818)
chr3 (168-205)||(26549895-26549932)
chr3 (166-206)||(11908419-11908459)
chr3 (166-206)||(27847966-27848006)
chr3 (13-68)||(49822343-49822399)
chr3 (167-206)||(4046502-4046541)
chr3 (167-206)||(7008499-7008538)
chr3 (167-206)||(10424304-10424343)
chr3 (167-206)||(12975210-12975249)
chr3 (167-206)||(29702036-29702075)
chr3 (167-206)||(30688555-30688594)
chr3 (170-201)||(30862466-30862497)
chr3 (167-206)||(31169915-31169954)
chr3 (167-206)||(33795163-33795201)
chr3 (167-206)||(35471967-35472006)
chr3 (168-199)||(39291089-39291120)
chr3 (167-206)||(42564327-42564366)
chr3 (167-206)||(43475799-43475838)
chr3 (168-202)||(51974630-51974664)
chr3 (217-250)||(33751648-33751681)
chr3 (168-205)||(47700594-47700631)
chr3 (217-250)||(50034626-50034659)
chr3 (167-199)||(20139945-20139977)
chr3 (170-206)||(33187764-33187800)
chr3 (167-203)||(46136922-46136958)
chr3 (166-206)||(51304941-51304981)
[»] chr6 (22 HSPs)
chr6 (167-250)||(2503681-2503765)
chr6 (167-250)||(34328736-34328820)
chr6 (167-250)||(198162-198247)
chr6 (166-250)||(635018-635103)
chr6 (166-250)||(6377130-6377215)
chr6 (166-250)||(17957998-17958083)
chr6 (170-250)||(32360085-32360165)
chr6 (13-76)||(29951578-29951641)
chr6 (168-206)||(6725324-6725362)
chr6 (27-75)||(2503857-2503905)
chr6 (167-206)||(8668817-8668856)
chr6 (167-206)||(10886621-10886660)
chr6 (167-206)||(34841858-34841897)
chr6 (168-206)||(7541324-7541362)
chr6 (27-68)||(198341-198382)
chr6 (167-250)||(29951725-29951811)
chr6 (167-206)||(8222496-8222535)
chr6 (167-206)||(12502292-12502331)
chr6 (167-206)||(12513408-12513447)
chr6 (167-206)||(24348859-24348898)
chr6 (167-206)||(30446648-30446687)
chr6 (13-76)||(34328912-34328975)
[»] chr2 (34 HSPs)
chr2 (167-250)||(4296303-4296387)
chr2 (167-250)||(8855335-8855419)
chr2 (167-250)||(926502-926585)
chr2 (13-76)||(37246165-37246228)
chr2 (167-250)||(36855056-36855140)
chr2 (167-250)||(37245990-37246074)
chr2 (13-76)||(39432271-39432333)
chr2 (166-250)||(9072620-9072705)
chr2 (166-250)||(12858227-12858312)
chr2 (166-250)||(30819317-30819402)
chr2 (166-206)||(1987525-1987565)
chr2 (168-206)||(43494918-43494956)
chr2 (166-206)||(14383352-14383392)
chr2 (167-203)||(31184938-31184974)
chr2 (20-76)||(36854921-36854977)
chr2 (167-206)||(1072712-1072751)
chr2 (167-206)||(7585184-7585223)
chr2 (13-76)||(8855507-8855570)
chr2 (167-206)||(9118207-9118246)
chr2 (167-206)||(22349552-22349591)
chr2 (167-206)||(36527203-36527242)
chr2 (167-206)||(43022075-43022114)
chr2 (167-206)||(44280499-44280538)
chr2 (167-205)||(39432412-39432450)
chr2 (167-204)||(2778797-2778834)
chr2 (27-76)||(4296164-4296213)
chr2 (169-206)||(6332951-6332988)
chr2 (167-203)||(31204664-31204700)
chr2 (167-206)||(1308331-1308370)
chr2 (167-206)||(7762833-7762872)
chr2 (167-206)||(13151232-13151271)
chr2 (167-206)||(17928855-17928894)
chr2 (217-250)||(1987478-1987511)
chr2 (174-206)||(5145027-5145059)
[»] chr7 (33 HSPs)
chr7 (167-250)||(33379622-33379705)
chr7 (167-250)||(37888717-37888800)
chr7 (167-250)||(5813614-5813698)
chr7 (167-250)||(35028472-35028556)
chr7 (20-76)||(25217805-25217861)
chr7 (167-247)||(25217942-25218022)
chr7 (167-250)||(30630287-30630371)
chr7 (168-250)||(35192757-35192839)
chr7 (168-206)||(43570795-43570833)
chr7 (13-71)||(48985400-48985458)
chr7 (13-76)||(5813787-5813850)
chr7 (13-68)||(22194748-22194803)
chr7 (167-206)||(26815505-26815544)
chr7 (167-206)||(28317733-28317772)
chr7 (13-76)||(30630139-30630202)
chr7 (167-206)||(33508254-33508293)
chr7 (167-206)||(38970431-38970470)
chr7 (167-206)||(40300585-40300624)
chr7 (167-205)||(24793818-24793856)
chr7 (167-205)||(48985265-48985303)
chr7 (168-201)||(25038245-25038278)
chr7 (170-206)||(36521878-36521914)
chr7 (166-206)||(42881985-42882025)
chr7 (167-206)||(30720500-30720539)
chr7 (167-206)||(32126903-32126942)
chr7 (167-206)||(32749333-32749372)
chr7 (167-206)||(33078456-33078495)
chr7 (167-206)||(37952157-37952196)
chr7 (167-206)||(39770110-39770149)
chr7 (171-206)||(40690707-40690742)
chr7 (168-206)||(22194613-22194651)
chr7 (217-250)||(22194564-22194597)
chr7 (174-206)||(22660264-22660296)
[»] chr5 (42 HSPs)
chr5 (13-76)||(41263941-41264004)
chr5 (167-248)||(41152527-41152608)
chr5 (167-250)||(8176020-8176104)
chr5 (167-250)||(25033524-25033608)
chr5 (167-250)||(41263767-41263851)
chr5 (13-76)||(8175867-8175930)
chr5 (166-250)||(4580345-4580430)
chr5 (167-206)||(25653205-25653244)
chr5 (168-206)||(14279216-14279254)
chr5 (166-250)||(31011729-31011814)
chr5 (168-205)||(34529066-34529103)
chr5 (167-203)||(7827497-7827533)
chr5 (20-76)||(25033692-25033748)
chr5 (166-206)||(27946002-27946042)
chr5 (166-205)||(3455210-3455249)
chr5 (167-206)||(13592565-13592604)
chr5 (167-206)||(21368635-21368674)
chr5 (167-206)||(31008053-31008092)
chr5 (167-206)||(32973038-32973077)
chr5 (167-206)||(40892173-40892212)
chr5 (168-206)||(12913232-12913270)
chr5 (167-205)||(36572052-36572090)
chr5 (168-205)||(15972968-15973005)
chr5 (27-76)||(31011593-31011642)
chr5 (168-205)||(37882130-37882167)
chr5 (166-206)||(9958065-9958105)
chr5 (167-203)||(19241692-19241728)
chr5 (167-206)||(4219068-4219107)
chr5 (167-206)||(4938472-4938511)
chr5 (167-206)||(7651354-7651393)
chr5 (167-206)||(23648713-23648752)
chr5 (167-206)||(23809820-23809859)
chr5 (167-206)||(29616135-29616174)
chr5 (167-206)||(30644688-30644727)
chr5 (167-206)||(32363108-32363147)
chr5 (167-205)||(25670460-25670498)
chr5 (168-205)||(2300200-2300237)
chr5 (168-205)||(8680970-8681007)
chr5 (169-206)||(42804440-42804477)
chr5 (166-206)||(13479242-13479282)
chr5 (166-206)||(23089914-23089954)
chr5 (166-206)||(27405836-27405876)
[»] scaffold0758 (1 HSPs)
scaffold0758 (167-206)||(6370-6409)
[»] scaffold0021 (1 HSPs)
scaffold0021 (167-206)||(109868-109907)
[»] scaffold1183 (1 HSPs)
scaffold1183 (168-206)||(26-64)
[»] scaffold0012 (1 HSPs)
scaffold0012 (168-250)||(124376-124458)
[»] scaffold1905 (2 HSPs)
scaffold1905 (167-203)||(313-349)
scaffold1905 (167-206)||(1085-1124)
[»] scaffold0004 (1 HSPs)
scaffold0004 (167-206)||(106215-106254)


Alignment Details
Target: chr8 (Bit Score: 52; Significance: 6e-21; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 18028843 - 18028906
Alignment:
Q  13 gagagagaaacgacttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||    
T  18028843 gagagagaaacgacttttggatagatagggacacgtggcgcgttttaattggttgtccggattc 18028906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 26631805 - 26631888
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacagnnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||||||||||        | |||||||||||||||||| |||||||||||||||    
T  26631805 ctctataaatagagacttggttcatttgatttggacacaggaaaaaaaccaagtttttcactatcttcatcttattattatctt 26631888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 30470471 - 30470554
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacagnnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||||||||||        | |||||||||||||||||| |||||||||||||||    
T  30470471 ctctataaatagagacttggttcatttgatttggacacaggaaaaaaaccaagtttttcactatcttcatcttattattatctt 30470554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 8449686 - 8449770
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacagnnnnnnnnct-aagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||||||||||         | ||||||||||||||||||||||||||||||||||    
T  8449686 ctctataaatagagacttggttcatttgatttggacacagaaaaaaaaatcaagtttttcactatcttcttcttattattatctt 8449770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 35101816 - 35101733
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacagnnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||| ||||||||||||||||||||        | ||||||||||| ||||||||||||||||||||||    
T  35101816 ctctataaatagagacttgattcatttgatttggacacagaaaaaaaaccaagtttttcaccatcttcttcttattattatctt 35101733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 36913142 - 36913079
Alignment:
Q  13 gagagagaaacgacttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    ||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||| |||||||    
T  36913142 gagagagaaacgagttttggatagatagggacacgtggcgcgttttaattggttgtccggattc 36913079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 34954985 - 34955069
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||||||||||         | ||||||||||||||||| ||||||||||||||||    
T  34954985 ctctataaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttattcttattattatctt 34955069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 4625176 - 4625216
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  4625176 cctctataaatagagacttggttcatttgatttggacacag 4625216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 13817471 - 13817387
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    |||||||||||||||||||| |||||||||||||||||||         | |||||||||||||||||| |||||||||||||||    
T  13817471 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcatcttattattatctt 13817387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 18028996 - 18029082
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag---nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||||||||||           | ||||||||||||||||| ||||||||||||||||    
T  18028996 ctctataaatagagacttggttcatttgatttggacacagaaaaaaaaaaaccaagtttttcactatctttttcttattattatctt 18029082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 36912988 - 36912904
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||| ||||||||||||         | |||||||||||||| |||||||||||||||||||    
T  36912988 ctctataaatagagacttggttcatttaatttggacacagaaaaaaaaaccaagtttttcactatattcttcttattattatctt 36912904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 4625023 - 4625086
Alignment:
Q  13 gagagagaaacgacttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    ||||||||||||||||||| |||| || ||||| ||||| |||||||||||||||| |||||||    
T  4625023 gagagagaaacgacttttgaataggtatggacacgtggcgcgttttaattggttgtccggattc 4625086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 5736442 - 5736403
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5736442 ctctataaatagagacttggttcatttgatttggacacag 5736403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 13817616 - 13817561
Alignment:
Q  13 gagagagaaacgacttttggatagatagggacatgtggcacgttttaattggttgt 68  Q
    ||||||||||||  ||||||||||||| ||||||||||| ||||||||||||||||    
T  13817616 gagagagaaacggtttttggatagataaggacatgtggcgcgttttaattggttgt 13817561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 26748611 - 26748650
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  26748611 ctctataaatagagacttggttcatttgatttggacacag 26748650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 42861118 - 42861032
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag--nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||| |||||||||||||||||||          | |||||||||||||||||| |||||||||||||||    
T  42861118 cctctataaatagagacttggatcatttgatttggacacagaaaaaaaaaaccaagtttttcactatcttcatcttattattatctt 42861032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 43617879 - 43617964
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacagnnnnnnnn--ctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||| ||||||| ||||||||||||||||          | ||||||||||||||||||||||||||||||||||    
T  43617879 ctctataaatagagatttggttcttttgatttggacacagaaaaaaaaacccaagtttttcactatcttcttcttattattatctt 43617964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 250
Target Start/End: Complemental strand, 5214214 - 5214133
Alignment:
Q  170 tataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||| |||||||||||||||||||         | |||||||||||||||||| |||||||||||||||    
T  5214214 tataaatagagacttggatcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcatcttattattatctt 5214133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 43617739 - 43617788
Alignment:
Q  27 ttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    ||||||||||||| ||||| |||||||||||||||||||||| |||||||    
T  43617739 ttttggatagataaggacacgtggcacgttttaattggttgtccggattc 43617788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 12272111 - 12272150
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  12272111 ctctataaatagagacttggatcatttgatttggacacag 12272150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 31129102 - 31129141
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  31129102 ctctataaatagagacttggatcatttgatttggacacag 31129141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 35101969 - 35101906
Alignment:
Q  13 gagagagaaacgacttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    ||||||||||||  ||||||| ||||| ||||| ||||| |||||||||||||||| |||||||    
T  35101969 gagagagaaacgcattttggaaagataaggacacgtggcgcgttttaattggttgtccggattc 35101906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 42860344 - 42860305
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  42860344 ctctataaatagagacttggatcatttgatttggacacag 42860305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 45100674 - 45100713
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  45100674 ctctataaatagagacttggatcatttgatttggacacag 45100713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 30289415 - 30289453
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  30289415 tctataaatagtgacttggttcatttgatttggacacag 30289453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 26631675 - 26631724
Alignment:
Q  27 ttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    |||||||||||||||| || ||||| |||||||||||||||| |||||||    
T  26631675 ttttggatagataggggcacgtggcgcgttttaattggttgtccggattc 26631724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 30470333 - 30470382
Alignment:
Q  27 ttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    ||||||||||||||||||| ||||  |||||||||||||||| |||||||    
T  30470333 ttttggatagatagggacacgtggggcgttttaattggttgtccggattc 30470382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 39810709 - 39810746
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacaca 205  Q
    |||||| |||||||||||||||||||||||||||||||    
T  39810709 tctatagatagagacttggttcatttgatttggacaca 39810746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 231776 - 231736
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| ||||||| ||||||||||||    
T  231776 cctctataaatagagacttgattcatttaatttggacacag 231736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 708187 - 708147
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| ||||||| ||||||||||||    
T  708187 cctctataaatagagacttgattcatttaatttggacacag 708147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 745399 - 745359
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| ||||||| ||||||||||||    
T  745399 cctctataaatagagacttgattcatttaatttggacacag 745359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 869294 - 869254
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| ||||||| ||||||||||||    
T  869294 cctctataaatagagacttgattcatttaatttggacacag 869254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 26414630 - 26414590
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| || |||||||||||||||||    
T  26414630 cctctataaatagagacttgtttaatttgatttggacacag 26414590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 26748475 - 26748523
Alignment:
Q  20 aaacgacttttggatagatagggacatgtggcacgttttaattggttgt 68  Q
    |||||| ||||||||||||||||||| |||||  |||||||||||||||    
T  26748475 aaacgagttttggatagatagggacacgtggcgtgttttaattggttgt 26748523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 1633069 - 1633108
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  1633069 ctctataaatagagactttgatcatttgatttggacacag 1633108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 206
Target Start/End: Original strand, 1954904 - 1954939
Alignment:
Q  171 ataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||| |||||||||||||||||||    
T  1954904 ataaatagagacttggatcatttgatttggacacag 1954939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 8449531 - 8449586
Alignment:
Q  13 gagagagaaacgacttttggatagatagggacatgtggcacgttttaattggttgt 68  Q
    ||||||||||||  ||||||| ||||| ||||| ||||| ||||||||||||||||    
T  8449531 gagagagaaacgcattttggaaagataaggacacgtggcgcgttttaattggttgt 8449586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 13783838 - 13783877
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  13783838 ctctacaaatagagacttggatcatttgatttggacacag 13783877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 15057003 - 15056964
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  15057003 ctctataaatagagacttgaatcatttgatttggacacag 15056964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 41477617 - 41477579
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||||||||||| ||||||||| |||||||    
T  41477617 tctataaatagagacttggtttatttgatttagacacag 41477579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 5214351 - 5214302
Alignment:
Q  27 ttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    |||||||||||||  |||| ||||| |||||||||||||||| |||||||    
T  5214351 ttttggatagataatgacacgtggcgcgttttaattggttgtccggattc 5214302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 8607924 - 8607961
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacaca 205  Q
    |||||||||||| | |||||||||||||||||||||||    
T  8607924 tctataaatagatatttggttcatttgatttggacaca 8607961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 26414572 - 26414539
Alignment:
Q  217 aagtttttcactatcttcttcttattattatctt 250  Q
    |||||||||||||||||| |||||||||||||||    
T  26414572 aagtttttcactatcttcatcttattattatctt 26414539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 42861271 - 42861218
Alignment:
Q  13 gagagagaaacgacttttggatagatagggacatgtggcacgttttaattggtt 66  Q
    ||||||||||||  ||||||||||||| ||||| ||||| | ||||||||||||    
T  42861271 gagagagaaacggtttttggatagataaggacaggtggcgcattttaattggtt 42861218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 17744997 - 17744960
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||  |||||||||||||||||||||||||    
T  17744997 ctctataaataga--cttggttcatttgatttggacacag 17744960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 23550163 - 23550123
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||| |||||||||||||  |||||||||||||||||||    
T  23550163 cctctacaaatagagacttgaatcatttgatttggacacag 23550123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 6e-21; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 40596414 - 40596497
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacagnnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||||||||||        | |||||||||||||||||| |||||||||||||||    
T  40596414 ctctataaatagagacttggttcatttgatttggacacaggaaaaaaaccaagtttttcactatcttcatcttattattatctt 40596497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 46914190 - 46914274
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||||||||||         | ||||||||||||||||||||||||||||||||||    
T  46914190 ctctataaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcttcttattattatctt 46914274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 2211996 - 2212080
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||||||||||         | || |||||||||||||||||||||||||||||||    
T  2211996 ctctataaatagagacttggttcatttgatttggacacagaaaaaaaaaccaaatttttcactatcttcttcttattattatctt 2212080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 7401600 - 7401515
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag--nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    |||||||||| |||||||||||||||||||||||||||||          | ||||||||||||||||||||||||||||||||||    
T  7401600 ctctataaattgagacttggttcatttgatttggacacagaaaaaaaaaaccaagtttttcactatcttcttcttattattatctt 7401515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 27141860 - 27141945
Alignment:
Q  167 ctctataaat-agagacttggttcatttgatttggacacagnnnnnnnn-ctaagtttttcactatcttcttcttattattatctt 250  Q
    |||||||||| ||||||||||||||||||||||||||||||         | ||||||||||||||||||||||||||||||||||    
T  27141860 ctctataaattagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcttcttattattatctt 27141945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 250
Target Start/End: Original strand, 47749727 - 47749812
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    |||| ||||||||||||||||||||||||||||||||||||         | |||||||||||||||||| |||||||||||||||    
T  47749727 cctccataaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcatcttattattatctt 47749812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 36658862 - 36658778
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacagnnnnnnnnct-aagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||| ||||||||||||||||||||||||         | |||||||||||||||||| |||||||||||||||    
T  36658862 ctctataaatagagatttggttcatttgatttggacacagaaaaaaaaatcaagtttttcactatcttcatcttattattatctt 36658778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 21654353 - 21654416
Alignment:
Q  13 gagagagaaacgacttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    ||||||||||||  ||||||||||||| ||||| ||||| |||||||||||||||| |||||||    
T  21654353 gagagagaaacggtttttggatagataaggacacgtggcgcgttttaattggttgtccggattc 21654416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 55408218 - 55408256
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||||||||||||||||||||||    
T  55408218 tctataaatagagacttggttcatttgatttggacacag 55408256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 7401739 - 7401698
Alignment:
Q  27 ttttggatagatagggacatgtggcacgttttaattggttgt 68  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  7401739 ttttggatagataaggacatgtggcacgttttaattggttgt 7401698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 250
Target Start/End: Original strand, 53181131 - 53181216
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||| | |||||||||||||||||||         | |||||||||||||||||| |||||||||||||||    
T  53181131 cctctataaatagagactttgatcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcatcttattattatctt 53181216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 168 - 204
Target Start/End: Original strand, 55598 - 55634
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacac 204  Q
    |||||||||||||||||||||||||||||||||||||    
T  55598 tctataaatagagacttggttcatttgatttggacac 55634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 10090174 - 10090090
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||| ||||||||||||||||||||||||||||||| ||         | |||||||||||||||||| |||||||||||||||    
T  10090174 ctctacaaatagagacttggttcatttgatttggacatagaaaaaaaaaccaagtttttcactatcttcatcttattattatctt 10090090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 3529908 - 3529947
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  3529908 ctctataaatagagacttggatcatttgatttggacacag 3529947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 3614899 - 3614938
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  3614899 ctctataaatagagacttggatcatttgatttggacacag 3614938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 8995175 - 8995136
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  8995175 ctctataaatagagacttggatcatttgatttggacacag 8995136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 76
Target Start/End: Complemental strand, 12159322 - 12159255
Alignment:
Q  10 gcagagagagaaa-cgacttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    ||||||||||||| ||  ||||||||||||||||||| ||||  |||||||||||||||| |||||||    
T  12159322 gcagagagagaaaacgcgttttggatagatagggacacgtggtgcgttttaattggttgtccggattc 12159255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 13113952 - 13113913
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  13113952 ctctataaatagagacttggatcatttgatttggacacag 13113913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 16021261 - 16021222
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  16021261 ctctataaatagagacttggatcatttgatttggacacag 16021222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 16171542 - 16171581
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  16171542 ctctataaatagagacttggatcatttgatttggacacag 16171581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 21654502 - 21654541
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  21654502 ctctataaatagagacttggatcatttgatttggacacag 21654541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 28901538 - 28901499
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  28901538 ctctataaatagagacttggatcatttgatttggacacag 28901499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 31336182 - 31336221
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  31336182 ctctataaatagagacttggatcatttgatttggacacag 31336221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 39048704 - 39048783
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacacagnnnnnnnnctaagtttttcactatcttcttcttattattat 247  Q
    |||||||||||||||||||||||||||||||||| ||||        | |||||||||||||||||  |||||| |||||    
T  39048704 tctataaatagagacttggttcatttgatttggatacagaaaaaaaaccaagtttttcactatcttaatcttatcattat 39048783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 48506245 - 48506284
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  48506245 ctctataaatagagacttggatcatttgatttggacacag 48506284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 56054669 - 56054630
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  56054669 ctctataaatagagacttggatcatttgatttggacacag 56054630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 201
Target Start/End: Complemental strand, 12159163 - 12159129
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttgga 201  Q
    |||||||||||||||||||||||||||||||||||    
T  12159163 ctctataaatagagacttggttcatttgatttgga 12159129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 19409902 - 19409864
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacaca 205  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  19409902 ctctagaaatagagacttggttcatttgatttggacaca 19409864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 21047596 - 21047634
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  21047596 tctataaatagagatttggttcatttgatttggacacag 21047634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 68
Target Start/End: Original strand, 31848299 - 31848353
Alignment:
Q  14 agagagaaacgacttttggatagatagggacatgtggcacgttttaattggttgt 68  Q
    |||||||||||  ||||||||||||| ||||| ||||| ||||||||||||||||    
T  31848299 agagagaaacggtttttggatagataaggacaggtggcgcgttttaattggttgt 31848353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 31848453 - 31848491
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacaca 205  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  31848453 ctctataaatagagacttggatcatttgatttggacaca 31848491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 38173960 - 38173922
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  38173960 tctataaatagagacttggatcatttgatttggacacag 38173922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 10090315 - 10090266
Alignment:
Q  27 ttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    ||||| ||||||||||||| ||||| |||||||||||||||| |||||||    
T  10090315 ttttgaatagatagggacacgtggcgcgttttaattggttgtccggattc 10090266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 27141721 - 27141762
Alignment:
Q  27 ttttggatagatagggacatgtggcacgttttaattggttgt 68  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  27141721 ttttggatagataaggacacgtggcacgttttaattggttgt 27141762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 201
Target Start/End: Complemental strand, 33527115 - 33527082
Alignment:
Q  168 tctataaatagagacttggttcatttgatttgga 201  Q
    ||||||||||||||||||||||||||||||||||    
T  33527115 tctataaatagagacttggttcatttgatttgga 33527082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 39113432 - 39113469
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacaca 205  Q
    |||||||||| |||||||||||||||||||||||||||    
T  39113432 tctataaatatagacttggttcatttgatttggacaca 39113469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 40596276 - 40596325
Alignment:
Q  27 ttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    ||||||||||||||||||| ||||  |||||||||| |||||||||||||    
T  40596276 ttttggatagatagggacacgtggggcgttttaatttgttgttcggattc 40596325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 47749596 - 47749645
Alignment:
Q  27 ttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    ||||||||||||||||||| |||||  ||||||||||||||| |||||||    
T  47749596 ttttggatagatagggacacgtggcgtgttttaattggttgtccggattc 47749645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 34198907 - 34198947
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||| ||||||||||||| |||||||||||||||||||    
T  34198907 cctctattaatagagacttggatcatttgatttggacacag 34198947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 2211844 - 2211907
Alignment:
Q  13 gagagagaaacgacttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    ||||||||||||  ||||||| ||||| ||||| ||| | |||||||||||||||| |||||||    
T  2211844 gagagagaaacgcattttggaaagataaggacacgtgtcgcgttttaattggttgtccggattc 2211907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 23389622 - 23389661
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  23389622 ctctacaaatagagacttggatcatttgatttggacacag 23389661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 28447646 - 28447607
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  28447646 ctctataaatagagacttgaatcatttgatttggacacag 28447607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 33077508 - 33077547
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  33077508 ctctataaataaagacttggatcatttgatttggacacag 33077547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 33607427 - 33607388
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  33607427 ctctataaatagagactttgatcatttgatttggacacag 33607388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 34463189 - 34463228
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| | |||||||||||||||||    
T  34463189 ctctataaatagagacttggattatttgatttggacacag 34463228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 203
Target Start/End: Original strand, 39532831 - 39532866
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggaca 203  Q
    |||||||||||||| |||||||||||||||||||||    
T  39532831 tctataaatagagatttggttcatttgatttggaca 39532866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 45081128 - 45081167
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  45081128 ctctataaatagagactttgatcatttgatttggacacag 45081167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 55549703 - 55549742
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| | |||||||||||||||||    
T  55549703 ctctataaatagagacttggataatttgatttggacacag 55549742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 17329554 - 17329591
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacac 204  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  17329554 ctctacaaatagagacttggatcatttgatttggacac 17329591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 250
Target Start/End: Original strand, 21654554 - 21654587
Alignment:
Q  217 aagtttttcactatcttcttcttattattatctt 250  Q
    |||||||||||||||||| |||||||||||||||    
T  21654554 aagtttttcactatcttcatcttattattatctt 21654587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 32463719 - 32463682
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacaca 205  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  32463719 tctataaatagagatttggttcatttgatttgaacaca 32463682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 46914050 - 46914099
Alignment:
Q  27 ttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    |||||||||||||  |||| ||||| |||||||||||||||| |||||||    
T  46914050 ttttggatagataatgacacgtggcgcgttttaattggttgtccggattc 46914099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 206
Target Start/End: Original strand, 53347344 - 53347377
Alignment:
Q  173 aaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||| |||||||||||||||||||    
T  53347344 aaatagagacttggatcatttgatttggacacag 53347377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Original strand, 18469011 - 18469043
Alignment:
Q  174 aatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||| |||||||||||||||||||    
T  18469011 aatagagacttggatcatttgatttggacacag 18469043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 52773309 - 52773273
Alignment:
Q  170 tataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||||||  |||||||||||||||||||    
T  52773309 tataaatagagacttgaatcatttgatttggacacag 52773273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 6e-21; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 37646089 - 37646172
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacagnnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||||||| ||        | ||||||||||||||||||||||||||||||||||    
T  37646089 ctctataaatagagacttggttcatttgatttggacatagaaaaaaaaccaagtttttcactatcttcttcttattattatctt 37646172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 27629992 - 27630076
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||||||||||         | ||||||||||||||||||||||||||||||||||    
T  27629992 ctctataaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcttcttattattatctt 27630076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 31471608 - 31471524
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||||||||||         | ||||||||||||||||||||||||||||||||||    
T  31471608 ctctataaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcttcttattattatctt 31471524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 37419876 - 37419960
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||||||||||         | ||||||||||||||||||||||||||||||||||    
T  37419876 ctctataaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcttcttattattatctt 37419960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 44450917 - 44451001
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||||||| ||         | ||||||||||||||||||||||||||||||||||    
T  44450917 ctctataaatagagacttggttcatttgatttggacatagaaaaaaaaaccaagtttttcactatcttcttcttattattatctt 44451001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 45242473 - 45242388
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacagnnnnnnnnct-aagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||| |||||||||||||||||||         | |||||||||||||||||| |||||||||||||||    
T  45242473 cctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactatcttcatcttattattatctt 45242388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 44651495 - 44651411
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||||||| ||         | || |||||||||||||||||||||||||||||||    
T  44651495 ctctataaatagagacttggttcatttgatttggacatagaaaaaaaaaccaaatttttcactatcttcttcttattattatctt 44651411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 643348 - 643403
Alignment:
Q  13 gagagagaaacgacttttggatagatagggacatgtggcacgttttaattggttgt 68  Q
    ||||||||||||  ||||||||||||| ||||||||||| ||||||||||||||||    
T  643348 gagagagaaacggtttttggatagataaggacatgtggcgcgttttaattggttgt 643403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 8464987 - 8464948
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8464987 ctctataaatagagacttggttcatttgatttggacacag 8464948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 2474774 - 2474813
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  2474774 ctctataaatagagacttggatcatttgatttggacacag 2474813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 8471633 - 8471594
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  8471633 ctctataaatagagacttggatcatttgatttggacacag 8471594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 10265684 - 10265723
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  10265684 ctctataaatagagacttggatcatttgatttggacacag 10265723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 17786666 - 17786627
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  17786666 ctctataaatagagacttggttcatttgatttgtacacag 17786627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 19578562 - 19578601
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  19578562 ctctataaatagagacttggatcatttgatttggacacag 19578601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 27629839 - 27629902
Alignment:
Q  13 gagagagaaacgacttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    ||||||||||||  ||||||| ||||| ||||| ||||| |||||||||||||||| |||||||    
T  27629839 gagagagaaacgcattttggaaagataaggacacgtggcgcgttttaattggttgtccggattc 27629902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 37419722 - 37419785
Alignment:
Q  13 gagagagaaacgacttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    ||||||||||||  ||||||| ||||| ||||| ||||| |||||||||||||||| |||||||    
T  37419722 gagagagaaacgcattttggaaagataaggacacgtggcgcgttttaattggttgtccggattc 37419785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 76
Target Start/End: Original strand, 37645932 - 37645999
Alignment:
Q  10 gcagagagagaaac-gacttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    |||||||||||||  || ||||||||||||| ||||| ||| |||||||||||||||||| |||||||    
T  37645932 gcagagagagaaaatgatttttggatagataaggacacgtgacacgttttaattggttgtccggattc 37645999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 37690946 - 37690985
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  37690946 ctctataaatagagacttggatcatttgatttggacacag 37690985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 45623181 - 45623220
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  45623181 ctctataaatagagacttggatcatttgatttggacacag 45623220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 51156335 - 51156374
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  51156335 ctctataaatagagacttggatcatttgatttggacacag 51156374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 51494124 - 51494163
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  51494124 ctctataaatagagacttggatcatttgatttggacacag 51494163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 52930344 - 52930383
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  52930344 ctctataaatagagacttggttcatttgatttgaacacag 52930383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 643502 - 643540
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacaca 205  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  643502 ctctataaatagagacttggatcatttgatttggacaca 643540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 17675995 - 17676033
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacaca 205  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  17675995 ctctataaatagagacttggatcatttgatttggacaca 17676033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 20584473 - 20584511
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  20584473 tctataaatagagacttggttcatttgattttgacacag 20584511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 48927295 - 48927257
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  48927295 tctataaatagaggcttggttcatttgatttggacacag 48927257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 3754708 - 3754745
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacaca 205  Q
    |||||||||||||| |||||||||||||||||||||||    
T  3754708 tctataaatagagaattggttcatttgatttggacaca 3754745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 17786799 - 17786758
Alignment:
Q  27 ttttggatagatagggacatgtggcacgttttaattggttgt 68  Q
    ||||||||||||||||||| ||||| ||||||||||||||||    
T  17786799 ttttggatagatagggacacgtggcgcgttttaattggttgt 17786758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 52930214 - 52930263
Alignment:
Q  27 ttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||| ||||    
T  52930214 ttttggatagatagggacacgtgacgcgttttaattggttgttcgaattc 52930263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 33167636 - 33167596
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  33167636 cctctataaatagagacttgaatcatttgatttggacacag 33167596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 36231341 - 36231305
Alignment:
Q  170 tataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||||||| |||||||||||||||||||    
T  36231341 tataaatagagacttggatcatttgatttggacacag 36231305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 29524324 - 29524285
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  29524324 ctctacaaatagagacttggatcatttgatttggacacag 29524285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 29919789 - 29919750
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  29919789 ctctataaatagagacttggatcatttgatttgaacacag 29919750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 43739451 - 43739412
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  43739451 ctctataaatagagacttgaatcatttgatttggacacag 43739412  T

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Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 45363901 - 45363862
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  45363901 ctctacaaatagagacttggatcatttgatttggacacag 45363862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 202
Target Start/End: Original strand, 48384829 - 48384864
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggac 202  Q
    |||||||||||||||||||| |||||||||||||||    
T  48384829 ctctataaatagagacttggatcatttgatttggac 48384864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 51523688 - 51523649
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacaca 205  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  51523688 cctctataaatagagacttggatcatttgatttagacaca 51523649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 37823022 - 37822984
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacaca 205  Q
    ||||| |||||||||||||| ||||||||||||||||||    
T  37823022 ctctacaaatagagacttggatcatttgatttggacaca 37822984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 39149562 - 39149524
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||||||| |||||||||||||| ||||||    
T  39149562 tctataaatagagacttagttcatttgatttgaacacag 39149524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 17786614 - 17786581
Alignment:
Q  217 aagtttttcactatcttcttcttattattatctt 250  Q
    |||||||||||||||||| |||||||||||||||    
T  17786614 aagtttttcactatcttcatcttattattatctt 17786581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 206
Target Start/End: Original strand, 30878290 - 30878323
Alignment:
Q  173 aaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||| |||||||||||||||||||    
T  30878290 aaatagagacttggatcatttgatttggacacag 30878323  T

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Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 31471747 - 31471698
Alignment:
Q  27 ttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    |||||||||||||  |||| |||||||||||||||||| ||| |||||||    
T  31471747 ttttggatagataatgacacgtggcacgttttaattggctgtccggattc 31471698  T

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Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 44334698 - 44334661
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacaca 205  Q
    |||||||||| ||| |||||||||||||||||||||||    
T  44334698 tctataaataaagatttggttcatttgatttggacaca 44334661  T

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Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 250
Target Start/End: Original strand, 25450133 - 25450218
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    |||||||||||||||||||||||||||||||||||||||||         | ||||||||||||||||||||||||||||||||||    
T  25450133 cctctataaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcttcttattattatctt 25450218  T

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Target: chr3; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 5844672 - 5844756
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||||||||||         | ||||||||||||||||||||||||||||||||||    
T  5844672 ctctataaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcttcttattattatctt 5844756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 17469836 - 17469752
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||||||||||         | ||||||||||||||||||||||||||||||||||    
T  17469836 ctctataaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcttcttattattatctt 17469752  T

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Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 47147693 - 47147609
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||||||||||         | ||||||||||||||||||||||||||||||||||    
T  47147693 ctctataaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcttcttattattatctt 47147609  T

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Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 25449989 - 25450052
Alignment:
Q  13 gagagagaaacgacttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    |||||||||||||||||||||||||||||||||  |||| |||||||||||||||| |||||||    
T  25449989 gagagagaaacgacttttggatagatagggacacatggcgcgttttaattggttgtccggattc 25450052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 37409983 - 37410046
Alignment:
Q  13 gagagagaaacgacttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    ||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||| |||||||    
T  37409983 gagagagaaacgagttttggatagatagggacacgtggcgcgttttaattggttgtccggattc 37410046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 49086556 - 49086473
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacagnnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||| ||||||||||||||||||||||||          |||||||||||||||||| |||||||||||||||    
T  49086556 ctctataaatagagatttggttcatttgatttggacacagaaaaaaaatcaagtttttcactatcttcatcttattattatctt 49086473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 250
Target Start/End: Original strand, 25787408 - 25787493
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||| |||||||||||||||||||         | |||||||||||||||||| |||||||||||||||    
T  25787408 cctctataaatagagacttggatcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcatcttattattatctt 25787493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 250
Target Start/End: Original strand, 25829365 - 25829450
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||| |||||||||||||||||||         | |||||||||||||||||| |||||||||||||||    
T  25829365 cctctataaatagagacttggatcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcatcttattattatctt 25829450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 250
Target Start/End: Original strand, 42598063 - 42598148
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||| |||||||||||||||||||         | |||||||||||||||||| |||||||||||||||    
T  42598063 cctctataaatagagacttggatcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcatcttattattatctt 42598148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 42602290 - 42602251
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  42602290 ctctataaatagagacttggttcatttgatttggacacag 42602251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 50020415 - 50020334
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacagnnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||| |||||         | |||||||||||||||||| |||||||||||||||    
T  50020415 ctctataaatagagacttggttcatttgatttgaacaca--aaaaaaaccaagtttttcactatcttcatcttattattatctt 50020334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 50034712 - 50034673
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  50034712 ctctataaatagagacttggttcatttgatttggacacag 50034673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 28410813 - 28410775
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28410813 tctataaatagagacttggttcatttgatttggacacag 28410775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 35852893 - 35852931
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||||||||||||||||||||||    
T  35852893 tctataaatagagacttggttcatttgatttggacacag 35852931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 43023022 - 43022984
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||||||||||||||||||||||    
T  43023022 tctataaatagagacttggttcatttgatttggacacag 43022984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 46572610 - 46572647
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacaca 205  Q
    ||||||||||||||||||||||||||||||||||||||    
T  46572610 tctataaatagagacttggttcatttgatttggacaca 46572647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 33934895 - 33934935
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  33934895 cctctataaatagagacttggatcatttgatttggacacag 33934935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 49822446 - 49822510
Alignment:
Q  13 gagagagaaacgactttt-ggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    ||||||||||||| |||| ||||||||| ||||| ||||| |||||||||||||||| |||||||    
T  49822446 gagagagaaacgattttttggatagataaggacacgtggcgcgttttaattggttgtccggattc 49822510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 4873807 - 4873846
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  4873807 ctctataaatagagacttggatcatttgatttggacacag 4873846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 5844519 - 5844582
Alignment:
Q  13 gagagagaaacgacttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    ||||||||||||  ||||||| ||||| ||||| ||||| |||||||||||||||| |||||||    
T  5844519 gagagagaaacgcattttggaaagataaggacacgtggcgcgttttaattggttgtccggattc 5844582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 6044982 - 6045021
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  6044982 ctctataaatagagacttggatcatttgatttggacacag 6045021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 203
Target Start/End: Original strand, 15493431 - 15493466
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggaca 203  Q
    ||||||||||||||||||||||||||||||||||||    
T  15493431 tctataaatagagacttggttcatttgatttggaca 15493466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 26162189 - 26162228
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  26162189 ctctataaatagagacttggatcatttgatttggacacag 26162228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 30415111 - 30415150
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  30415111 ctctataaatagagacttggatcatttgatttggacacag 30415150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 32120088 - 32120127
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  32120088 ctctataaatagagacttggatcatttgatttggacacag 32120127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 33751733 - 33751694
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  33751733 ctctataaatagagacttggttcatttgatttgggcacag 33751694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 33751879 - 33751824
Alignment:
Q  13 gagagagaaacgacttttggatagatagggacatgtggcacgttttaattggttgt 68  Q
    ||||||||||||| ||| ||||||||||||||| |||||  |||||||||||||||    
T  33751879 gagagagaaacgagtttaggatagatagggacacgtggcgtgttttaattggttgt 33751824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 37182718 - 37182757
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  37182718 ctctataaatagagacttggatcatttgatttggacacag 37182757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 37410138 - 37410177
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  37410138 ctctataaatagagacttggttcatttaatttggacacag 37410177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 38571797 - 38571836
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  38571797 ctctataaatagagacttggatcatttgatttggacacag 38571836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 41183691 - 41183652
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  41183691 ctctataaatagagacttggatcatttgatttggacacag 41183652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 44084729 - 44084690
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  44084729 ctctataaatagagacttggatcatttgatttggacacag 44084690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 49356939 - 49356978
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  49356939 ctctttaaatagagacttggttcatttgatttggacacag 49356978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 50734436 - 50734397
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  50734436 ctctataaatagagacttggatcatttgatttggacacag 50734397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 50778419 - 50778458
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  50778419 ctctataaatagagacttggatcatttgatttggacacag 50778458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 51436048 - 51435962
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag--nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||| | |||||||||||||||||||          | |||||||||||||||||| |||||||||||||||    
T  51436048 cctctataaatagagacttagatcatttgatttggacacagaaaaaaaaaaccaagtttttcactatcttcatcttattattatctt 51435962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 51998890 - 51998929
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  51998890 ctctataaatagagacttggatcatttgatttggacacag 51998929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 55027183 - 55027144
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  55027183 ctctataaatagagacttggatcatttgatttggacacag 55027144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 49146972 - 49147010
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  49146972 tctataaatagagaattggttcatttgatttggacacag 49147010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 49710155 - 49710193
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  49710155 tctataaatagagacttggttcatttgattttgacacag 49710193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 53722911 - 53722873
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  53722911 tctataaatagagactttgttcatttgatttggacacag 53722873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 7520781 - 7520818
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacac 204  Q
    |||||||||||||||||||||| |||||||||||||||    
T  7520781 ctctataaatagagacttggtttatttgatttggacac 7520818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 26549895 - 26549932
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacaca 205  Q
    |||||||||| |||||||||||||||||||||||||||    
T  26549895 tctataaataaagacttggttcatttgatttggacaca 26549932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 11908459 - 11908419
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||| |||||||||||||| |||||||||||||||||||    
T  11908459 cctctacaaatagagacttggatcatttgatttggacacag 11908419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 27848006 - 27847966
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||||||||||| ||||||||||| |||||||    
T  27848006 cctctataaatagagacttggatcatttgattttgacacag 27847966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 49822343 - 49822399
Alignment:
Q  13 gagagagaaacgactttt-ggatagatagggacatgtggcacgttttaattggttgt 68  Q
    ||||||||||||| |||| ||||||||| ||||| ||||| ||||||||||||||||    
T  49822343 gagagagaaacgattttttggatagataaggacacgtggcgcgttttaattggttgt 49822399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 4046541 - 4046502
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  4046541 ctctataaatagagacttgaatcatttgatttggacacag 4046502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 7008538 - 7008499
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  7008538 ctctataaatagagacttggatcatttgatttggatacag 7008499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 10424304 - 10424343
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| | |||||||||||||||||    
T  10424304 ctctataaatagagacttggattatttgatttggacacag 10424343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 12975249 - 12975210
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  12975249 ctctacaaatagagacttggatcatttgatttggacacag 12975210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 29702075 - 29702036
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  29702075 ctctataaatagagacttggatcatttgatttggatacag 29702036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 30688555 - 30688594
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||||| ||| ||||||||||||||||||||    
T  30688555 ctctataaatagagatttgattcatttgatttggacacag 30688594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 201
Target Start/End: Original strand, 30862466 - 30862497
Alignment:
Q  170 tataaatagagacttggttcatttgatttgga 201  Q
    ||||||||||||||||||||||||||||||||    
T  30862466 tataaatagagacttggttcatttgatttgga 30862497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 31169915 - 31169954
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  31169915 ctctacaaatagagacttggatcatttgatttggacacag 31169954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 33795163 - 33795201
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  33795163 ctctataaatag-gacttggttcatttgatttggacacag 33795201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 35471967 - 35472006
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  35471967 ctctacaaatagagacttggatcatttgatttggacacag 35472006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 199
Target Start/End: Complemental strand, 39291120 - 39291089
Alignment:
Q  168 tctataaatagagacttggttcatttgatttg 199  Q
    ||||||||||||||||||||||||||||||||    
T  39291120 tctataaatagagacttggttcatttgatttg 39291089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 42564366 - 42564327
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  42564366 ctctataaatagagacttagatcatttgatttggacacag 42564327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 43475838 - 43475799
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  43475838 ctctataaatagagactttgatcatttgatttggacacag 43475799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 51974664 - 51974630
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggac 202  Q
    |||||||||||| ||||||||||||||||||||||    
T  51974664 tctataaatagaaacttggttcatttgatttggac 51974630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 33751681 - 33751648
Alignment:
Q  217 aagtttttcactatcttcttcttattattatctt 250  Q
    |||||||||||||||||| |||||||||||||||    
T  33751681 aagtttttcactatcttcatcttattattatctt 33751648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 47700594 - 47700631
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacaca 205  Q
    ||||||||||||||||| ||||||||||||| ||||||    
T  47700594 tctataaatagagacttagttcatttgatttagacaca 47700631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 50034659 - 50034626
Alignment:
Q  217 aagtttttcactatcttcttcttattattatctt 250  Q
    |||||||||||||||||| |||||||||||||||    
T  50034659 aagtttttcactatcttcatcttattattatctt 50034626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 199
Target Start/End: Complemental strand, 20139977 - 20139945
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttg 199  Q
    |||||||||||||||||||| ||||||||||||    
T  20139977 ctctataaatagagacttggatcatttgatttg 20139945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Original strand, 33187764 - 33187800
Alignment:
Q  170 tataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||||||| | |||||||||||||||||    
T  33187764 tataaatagagacttggattatttgatttggacacag 33187800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 203
Target Start/End: Original strand, 46136922 - 46136958
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggaca 203  Q
    |||||||||||||||||||| | ||||||||||||||    
T  46136922 ctctataaatagagacttggataatttgatttggaca 46136958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 51304981 - 51304941
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||| ||||||| |||||| |||||||||||||||||||    
T  51304981 cctctacaaatagaaacttggatcatttgatttggacacag 51304941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 4e-19; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 2503765 - 2503681
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||||||||||         | ||||||||||||||||||||||||||||||||||    
T  2503765 ctctataaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcttcttattattatctt 2503681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 34328820 - 34328736
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||||||||||         | || |||||||||||||||||||||||||||||||    
T  34328820 ctctataaatagagacttggttcatttgatttggacacagaaaaaaaaaccaaatttttcactatcttcttcttattattatctt 34328736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 198247 - 198162
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag--nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||||||||||          | ||||| ||||||||||||||||||||||||||||    
T  198247 ctctataaatagagacttggttcatttgatttggacacagaaaaaaaaaaccaagttattcactatcttcttcttattattatctt 198162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 635103 - 635018
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacagnnnnnnnnct-aagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||| |||||||||||||||||||         | |||||||||||||||||| |||||||||||||||    
T  635103 cctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactatcttcatcttattattatctt 635018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 250
Target Start/End: Original strand, 6377130 - 6377215
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||| |||||||||||||||||||         | |||||||||||||||||| |||||||||||||||    
T  6377130 cctctataaatagagacttggatcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcatcttattattatctt 6377215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 250
Target Start/End: Original strand, 17957998 - 17958083
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||| |||||||||||||||||||         | |||||||||||||||||| |||||||||||||||    
T  17957998 cctctataaatagagacttggatcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcatcttattattatctt 17958083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 250
Target Start/End: Complemental strand, 32360165 - 32360085
Alignment:
Q  170 tataaatagagacttggttcatttgatttggacacagnnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    |||||||||||||||| ||||||||||||||||||||        | |||||||||||||||||  |||||||||||||||    
T  32360165 tataaatagagacttgattcatttgatttggacacagaaaaaaaaccaagtttttcactatcttaatcttattattatctt 32360085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 29951578 - 29951641
Alignment:
Q  13 gagagagaaacgacttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    ||||||||||||  ||||||||||||| ||||| ||||| |||||||||||||||| |||||||    
T  29951578 gagagagaaacggtttttggatagataaggacacgtggcgcgttttaattggttgtccggattc 29951641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 6725324 - 6725362
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6725324 tctataaatagagacttggttcatttgatttggacacag 6725362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 75
Target Start/End: Complemental strand, 2503905 - 2503857
Alignment:
Q  27 ttttggatagatagggacatgtggcacgttttaattggttgttcggatt 75  Q
    ||||||||||||| ||||| |||||||||||||||||||||| ||||||    
T  2503905 ttttggatagataaggacacgtggcacgttttaattggttgtccggatt 2503857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 8668856 - 8668817
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  8668856 ctctataaatagagacttggatcatttgatttggacacag 8668817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 10886660 - 10886621
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  10886660 ctctataaatagagacttggatcatttgatttggacacag 10886621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 34841897 - 34841858
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  34841897 ctctataaatagagacttggatcatttgatttggacacag 34841858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 7541362 - 7541324
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  7541362 tctataaatagagatttggttcatttgatttggacacag 7541324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 198382 - 198341
Alignment:
Q  27 ttttggatagatagggacatgtggcacgttttaattggttgt 68  Q
    ||||||||||||| ||||| ||||||||||||||||||||||    
T  198382 ttttggatagataaggacacgtggcacgttttaattggttgt 198341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 29951725 - 29951811
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag---nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    |||||||||||||||||| | |||||||||||||||||||           | |||||||||||||||||| |||||||||||||||    
T  29951725 ctctataaatagagacttagatcatttgatttggacacagaaaaaaaaaaaccaagtttttcactatcttcatcttattattatctt 29951811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 8222535 - 8222496
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  8222535 ctctataaatagatacttggatcatttgatttggacacag 8222496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 12502331 - 12502292
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  12502331 ctctataaatagagacttgaatcatttgatttggacacag 12502292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 12513447 - 12513408
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  12513447 ctctataaatagagactttgatcatttgatttggacacag 12513408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 24348898 - 24348859
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  24348898 ctctacaaatagagacttggatcatttgatttggacacag 24348859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 30446687 - 30446648
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| ||||||||||| |||||||    
T  30446687 ctctataaatagagacttggatcatttgattttgacacag 30446648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 34328975 - 34328912
Alignment:
Q  13 gagagagaaacgacttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    ||||||||||||  ||||||| ||||| |||||  |||| |||||||||||||||| |||||||    
T  34328975 gagagagaaacgcattttggaaagataaggacacatggcgcgttttaattggttgtccggattc 34328912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 4e-19; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 4296303 - 4296387
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||||||||||         | ||||||||||||||||||||||||||||||||||    
T  4296303 ctctataaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcttcttattattatctt 4296387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 8855419 - 8855335
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||||||||||         | ||||||||||||||||||||||||||||||||||    
T  8855419 ctctataaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcttcttattattatctt 8855335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 926502 - 926585
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacagnnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||||||||||        | |||||||||||||||||  |||||||||||||||    
T  926502 ctctataaatagagacttggttcatttgatttggacacagaaaaaaaaccaagtttttcactatcttaatcttattattatctt 926585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 37246228 - 37246165
Alignment:
Q  13 gagagagaaacgacttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    ||||||||||||| ||||||||||||||||||| ||||| |||||||||||||||| |||||||    
T  37246228 gagagagaaacgagttttggatagatagggacacgtggcgcgttttaattggttgtccggattc 37246165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 36855056 - 36855140
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||||||||||         | |||||||||||||||||| |||||||||||||||    
T  36855056 ctctataaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcatcttattattatctt 36855140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 37246074 - 37245990
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||| ||||||||||||         | ||||||||||||||||||||||||||||||||||    
T  37246074 ctctataaatagagacttggttcatttaatttggacacagaaaaaaaaaccaagtttttcactatcttcttcttattattatctt 37245990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 39432271 - 39432333
Alignment:
Q  13 gagagagaaacgacttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    ||||||||||||| ||||||||||||||| ||| ||||||| ||||||||||||||||||||||    
T  39432271 gagagagaaacgagttttggatagatagg-acacgtggcacattttaattggttgttcggattc 39432333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 250
Target Start/End: Original strand, 9072620 - 9072705
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||| |||||||||||||||||||         | |||||||||||||||||| |||||||||||||||    
T  9072620 cctctataaatagagacttggatcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcatcttattattatctt 9072705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 12858312 - 12858227
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacagnnnnnnnnct-aagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||| |||||||||||||||||||         | |||||||||||||||||| |||||||||||||||    
T  12858312 cctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactatcttcatcttattattatctt 12858227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 250
Target Start/End: Original strand, 30819317 - 30819402
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacagnnnnnnnnct-aagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||| |||||||||||||||||||         | |||||||||||||||||| |||||||||||||||    
T  30819317 cctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactatcttcatcttattattatctt 30819402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 1987565 - 1987525
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1987565 cctctataaatagagacttggttcatttgatttggacacag 1987525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 43494918 - 43494956
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||||||||||||||||||||||    
T  43494918 tctataaatagagacttggttcatttgatttggacacag 43494956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 14383392 - 14383352
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  14383392 cctctataaatagagacttggatcatttgatttggacacag 14383352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 203
Target Start/End: Original strand, 31184938 - 31184974
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggaca 203  Q
    |||||||||||||||||||||||||||||||||||||    
T  31184938 ctctataaatagagacttggttcatttgatttggaca 31184974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 36854921 - 36854977
Alignment:
Q  20 aaacgacttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    |||||| |||||||||||||||||||  ||| || ||||||||||||||||||||||    
T  36854921 aaacgagttttggatagatagggacacatgggacattttaattggttgttcggattc 36854977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 1072712 - 1072751
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  1072712 ctctataaatagagacttggatcatttgatttggacacag 1072751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 7585184 - 7585223
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  7585184 ctctataaatagagacttggatcatttgatttggacacag 7585223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 8855570 - 8855507
Alignment:
Q  13 gagagagaaacgacttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    ||||||||||||  ||||||| ||||| |||||  |||| ||||||||||||||||||||||||    
T  8855570 gagagagaaacgcattttggaaagataaggacacatggcgcgttttaattggttgttcggattc 8855507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 9118246 - 9118207
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  9118246 ctctataaatagagacttggatcatttgatttggacacag 9118207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 22349552 - 22349591
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  22349552 ctctataaatagagacttggatcatttgatttggacacag 22349591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 36527242 - 36527203
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  36527242 ctctataaatagagacttggatcatttgatttggacacag 36527203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 43022114 - 43022075
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  43022114 ctctataaatagagacttggatcatttgatttggacacag 43022075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 44280538 - 44280499
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  44280538 ctctataaatagagacttggatcatttgatttggacacag 44280499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 39432412 - 39432450
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacaca 205  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  39432412 ctctataaatagagacttggatcatttgatttggacaca 39432450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 204
Target Start/End: Original strand, 2778797 - 2778834
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacac 204  Q
    |||||||||||||||||||||| |||||||||||||||    
T  2778797 ctctataaatagagacttggtttatttgatttggacac 2778834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 4296164 - 4296213
Alignment:
Q  27 ttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    ||||||||| ||| ||||| ||| ||||||||||||||||||||||||||    
T  4296164 ttttggataaataaggacacgtgacacgttttaattggttgttcggattc 4296213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 6332951 - 6332988
Alignment:
Q  169 ctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  6332951 ctataaatagagatttggttcatttgatttggacacag 6332988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 203
Target Start/End: Original strand, 31204664 - 31204700
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggaca 203  Q
    |||| ||||||||||||||||||||||||||||||||    
T  31204664 ctctgtaaatagagacttggttcatttgatttggaca 31204700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 1308331 - 1308370
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  1308331 ctctacaaatagagacttggatcatttgatttggacacag 1308370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 7762833 - 7762872
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  7762833 ctctacaaatagagacttggatcatttgatttggacacag 7762872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 13151232 - 13151271
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| ||||||||||| |||||||    
T  13151232 ctctataaatagagacttggatcatttgatttcgacacag 13151271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 17928855 - 17928894
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  17928855 ctctacaaatagagacttggatcatttgatttggacacag 17928894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 1987511 - 1987478
Alignment:
Q  217 aagtttttcactatcttcttcttattattatctt 250  Q
    |||||||||||||||||| |||||||||||||||    
T  1987511 aagtttttcactatcttcatcttattattatctt 1987478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Original strand, 5145027 - 5145059
Alignment:
Q  174 aatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||| |||||||||||||||||||    
T  5145027 aatagagacttggatcatttgatttggacacag 5145059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 33379705 - 33379622
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacagnnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    |||||||||||||||||||||||||||||||||||||||         | |||||||||||||||||| |||||||||||||||    
T  33379705 ctctataaatagagacttggttcatttgatttggacacaaaaaaaaaaccaagtttttcactatcttcatcttattattatctt 33379622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 37888800 - 37888717
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacagnnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||||||||||        | |||||||||||||||||| ||| |||||||||||    
T  37888800 ctctataaatagagacttggttcatttgatttggacacagaaaaaaaaccaagtttttcactatcttcatctaattattatctt 37888717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 5813698 - 5813614
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||||||||||         | ||||||||||||||||| ||||||||||||||||    
T  5813698 ctctataaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatctttttcttattattatctt 5813614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 35028472 - 35028556
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||||||||||         | || |||||||||||||||||||||||||||||||    
T  35028472 ctctataaatagagacttggttcatttgatttggacacagaaaaaaaaaccaaatttttcactatcttcttcttattattatctt 35028556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 25217805 - 25217861
Alignment:
Q  20 aaacgacttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    |||||| ||||||||||||||||||| ||||| |||||||||||||||| |||||||    
T  25217805 aaacgagttttggatagatagggacacgtggcgcgttttaattggttgtccggattc 25217861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 247
Target Start/End: Original strand, 25217942 - 25218022
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacagnnnnnnnnctaagtttttcactatcttcttcttattattat 247  Q
    ||||||||||||||| ||||||||||||||||||||||||        | ||||||||||||||||||||| | |||||||    
T  25217942 ctctataaatagagatttggttcatttgatttggacacagaaaaaaaaccaagtttttcactatcttcttcatcttattat 25218022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 30630287 - 30630371
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacagnnnnnnnnct-aagtttttcactatcttcttcttattattatctt 250  Q
    |||||||||||||||||||| |||||||||||||||||||         | |||||||||||||||||| |||||||||||||||    
T  30630287 ctctataaatagagacttggatcatttgatttggacacagaaaaaaaaatcaagtttttcactatcttcatcttattattatctt 30630371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 250
Target Start/End: Original strand, 35192757 - 35192839
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacacagnnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||| ||||||||||||| |||        | |||||||||||||||||  |||||||||||||||    
T  35192757 tctataaatagagacttggtttatttgatttggactcagaaaaaaaaccaagtttttcactatcttaatcttattattatctt 35192839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 43570795 - 43570833
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||||||||||||||||||||||    
T  43570795 tctataaatagagacttggttcatttgatttggacacag 43570833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 71
Target Start/End: Complemental strand, 48985458 - 48985400
Alignment:
Q  13 gagagagaaacgacttttggatagatagggacatgtggcacgttttaattggttgttcg 71  Q
    ||||||||||||  ||||||||||||| ||||| ||||| |||||||||||||||||||    
T  48985458 gagagagaaacggtttttggatagataaggacaggtggcgcgttttaattggttgttcg 48985400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 5813850 - 5813787
Alignment:
Q  13 gagagagaaacgacttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    ||||||||||||  ||||||| ||||| ||||| ||||| |||||||||||||||| |||||||    
T  5813850 gagagagaaacgcattttggaaagataaggacacgtggcgcgttttaattggttgtccggattc 5813787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 22194803 - 22194748
Alignment:
Q  13 gagagagaaacgacttttggatagatagggacatgtggcacgttttaattggttgt 68  Q
    ||||||||||||  ||||||||||||| ||||| ||||| ||||||||||||||||    
T  22194803 gagagagaaacggtttttggatagataaggacacgtggcgcgttttaattggttgt 22194748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 26815544 - 26815505
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  26815544 ctctataaatagagacttggatcatttgatttggacacag 26815505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 28317733 - 28317772
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  28317733 ctctataaatagagacttggatcatttgatttggacacag 28317772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 30630139 - 30630202
Alignment:
Q  13 gagagagaaacgacttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    ||||||||||||  ||||||||||||| ||||| ||||  |||||||||||||||| |||||||    
T  30630139 gagagagaaacggtttttggatagataaggacacgtggtgcgttttaattggttgtccggattc 30630202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 33508254 - 33508293
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  33508254 ctctataaatagagacttggatcatttgatttggacacag 33508293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 38970470 - 38970431
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  38970470 ctctataaatagagacttggatcatttgatttggacacag 38970431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 40300585 - 40300624
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  40300585 ctctataaatagagacttggatcatttgatttggacacag 40300624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 24793856 - 24793818
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacaca 205  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  24793856 ctctataaatagagacttggttcgtttgatttggacaca 24793818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 205
Target Start/End: Complemental strand, 48985303 - 48985265
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacaca 205  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  48985303 ctctataaatagagacttggatcatttgatttggacaca 48985265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 201
Target Start/End: Original strand, 25038245 - 25038278
Alignment:
Q  168 tctataaatagagacttggttcatttgatttgga 201  Q
    ||||||||||||||||||||||||||||||||||    
T  25038245 tctataaatagagacttggttcatttgatttgga 25038278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 36521914 - 36521878
Alignment:
Q  170 tataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||||||| |||||||||||||||||||    
T  36521914 tataaatagagacttggatcatttgatttggacacag 36521878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 42882025 - 42881985
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  42882025 cctctataaatagagatttggatcatttgatttggacacag 42881985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 30720539 - 30720500
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  30720539 ctctataaatagagacttagatcatttgatttggacacag 30720500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 32126903 - 32126942
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  32126903 ctctacaaatagagacttggatcatttgatttggacacag 32126942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 32749372 - 32749333
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||||||||||  ||||||||||||||||||    
T  32749372 ctctataaatagagacttggaacatttgatttggacacag 32749333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 33078456 - 33078495
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  33078456 ctctataaatagagactttgatcatttgatttggacacag 33078495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 37952196 - 37952157
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  37952196 ctctataaatagagacttgaatcatttgatttggacacag 37952157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 39770149 - 39770110
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  39770149 ctctataaatagagacttagatcatttgatttggacacag 39770110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 206
Target Start/End: Complemental strand, 40690742 - 40690707
Alignment:
Q  171 ataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||| |||||||||||||||||||    
T  40690742 ataaatagagacttggatcatttgatttggacacag 40690707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 22194651 - 22194613
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||| |||||||| |||||||||||||||||||    
T  22194651 tctataaataaagacttggatcatttgatttggacacag 22194613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 22194597 - 22194564
Alignment:
Q  217 aagtttttcactatcttcttcttattattatctt 250  Q
    |||||||||||||||||| |||||||||||||||    
T  22194597 aagtttttcactatcttcatcttattattatctt 22194564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Complemental strand, 22660296 - 22660264
Alignment:
Q  174 aatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||| |||||||||||||||||||    
T  22660296 aatagagacttggatcatttgatttggacacag 22660264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 76
Target Start/End: Complemental strand, 41264004 - 41263941
Alignment:
Q  13 gagagagaaacgacttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    ||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||| |||||||    
T  41264004 gagagagaaacgacttttggatatatagggacacgtggcgcgttttaattggttgtccggattc 41263941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 167 - 248
Target Start/End: Original strand, 41152527 - 41152608
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacagnnnnnnnnctaagtttttcactatcttcttcttattattatc 248  Q
    ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||| |||||||||||||    
T  41152527 ctctataaatagagacttggttcatttgatttggacacagaaaaaaaaacaagtttttcactatcttcatcttattattatc 41152608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 250
Target Start/End: Original strand, 8176020 - 8176104
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||| ||||||||||||         | ||||||||||||||||||||||||||||||||||    
T  8176020 ctctataaatagagacttggttcatttaatttggacacagaaaaaaaaaccaagtttttcactatcttcttcttattattatctt 8176104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 25033608 - 25033524
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||||||||||||||||||||||         | |||||||||||||||||| |||||||||||||||    
T  25033608 ctctataaatagagacttggttcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcatcttattattatctt 25033524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 41263851 - 41263767
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacagnnnnnnnn-ctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||| ||||||||||||| ||||||         ||||||||||||||||||||||||||||||||||||    
T  41263851 ctctataaatagagacttgtttcatttgatttgaacacagaaaaaataactaagtttttcactatcttcttcttattattatctt 41263767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 8175867 - 8175930
Alignment:
Q  13 gagagagaaacgacttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    ||||||||||||| |||||||||||| |||||| ||||| |||||||||||||||| |||||||    
T  8175867 gagagagaaacgagttttggatagatggggacacgtggcgcgttttaattggttgtccggattc 8175930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 250
Target Start/End: Complemental strand, 4580430 - 4580345
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||| |||||||||||||||||||         | |||||||||||||||||| |||||||||||||||    
T  4580430 cctctataaatagagacttggatcatttgatttggacacagaaaaaaaaaccaagtttttcactatcttcatcttattattatctt 4580345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 25653244 - 25653205
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  25653244 ctctataaatagagacttggttcatttgatttggacacag 25653205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 14279254 - 14279216
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||||||||||||||||||||||    
T  14279254 tctataaatagagacttggttcatttgatttggacacag 14279216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 250
Target Start/End: Original strand, 31011729 - 31011814
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag-nnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||| |||||||||||||||||||         | || ||||||||||||||| |||||||||||||||    
T  31011729 cctctataaatagagacttggatcatttgatttggacacagaaaaaaaaaccaaatttttcactatcttcatcttattattatctt 31011814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 34529066 - 34529103
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacaca 205  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34529066 tctataaatagagacttggttcatttgatttggacaca 34529103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 203
Target Start/End: Complemental strand, 7827533 - 7827497
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggaca 203  Q
    |||||||||||||||||||||||||||||||||||||    
T  7827533 ctctataaatagagacttggttcatttgatttggaca 7827497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 25033748 - 25033692
Alignment:
Q  20 aaacgacttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    |||||| ||||||||||||||||||  ||||| |||||||||||||||| |||||||    
T  25033748 aaacgaattttggatagatagggacgcgtggcgcgttttaattggttgtccggattc 25033692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 27946042 - 27946002
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  27946042 cctctataaatagagacttggatcatttgatttggacacag 27946002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 205
Target Start/End: Complemental strand, 3455249 - 3455210
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacaca 205  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  3455249 cctctataaatagagacttggatcatttgatttggacaca 3455210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 13592565 - 13592604
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  13592565 ctctataaatagagacttggatcatttgatttggacacag 13592604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 21368674 - 21368635
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  21368674 ctctataaatagaaacttggttcatttgatttggacacag 21368635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 31008053 - 31008092
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  31008053 ctctataaatagagacttggatcatttgatttggacacag 31008092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 32973038 - 32973077
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  32973038 ctctataaatagagacttggatcatttgatttggacacag 32973077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 40892212 - 40892173
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  40892212 ctctataaatagagacttggatcatttgatttggacacag 40892173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 12913270 - 12913232
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  12913270 tctataaataaagacttggttcatttgatttggacacag 12913232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 36572052 - 36572090
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacaca 205  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  36572052 ctctataaatagagacttggatcatttgatttggacaca 36572090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 15973005 - 15972968
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacaca 205  Q
    |||||||||||||||||| |||||||||||||||||||    
T  15973005 tctataaatagagacttgattcatttgatttggacaca 15972968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 31011593 - 31011642
Alignment:
Q  27 ttttggatagatagggacatgtggcacgttttaattggttgttcggattc 76  Q
    |||||||||||||| |||| |||||||||||||||||| ||| |||||||    
T  31011593 ttttggatagatagtgacacgtggcacgttttaattggctgtccggattc 31011642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 37882130 - 37882167
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacaca 205  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  37882130 tctataaatagagacttggttaatttgatttggacaca 37882167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 9958105 - 9958065
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||||||||||| |||||||||||| ||||||    
T  9958105 cctctataaatagagacttggatcatttgatttgaacacag 9958065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 203
Target Start/End: Complemental strand, 19241728 - 19241692
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggaca 203  Q
    |||||||||||||||||||| ||||||||||||||||    
T  19241728 ctctataaatagagacttggatcatttgatttggaca 19241692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 4219068 - 4219107
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  4219068 ctctacaaatagagacttggatcatttgatttggacacag 4219107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 4938511 - 4938472
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||| |||||||| |||||||||||||||||||    
T  4938511 ctctataaataaagacttggatcatttgatttggacacag 4938472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 7651393 - 7651354
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  7651393 ctctataaatagagacttggatcatttgatttggatacag 7651354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 23648713 - 23648752
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  23648713 ctctataaatagagacttagatcatttgatttggacacag 23648752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 23809859 - 23809820
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  23809859 ctctataaatagagacttagatcatttgatttggacacag 23809820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 29616135 - 29616174
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||| | |||||||||||||||||||    
T  29616135 ctctataaatagagactttgatcatttgatttggacacag 29616174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 30644688 - 30644727
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  30644688 ctctataaattgagacttggatcatttgatttggacacag 30644727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 32363108 - 32363147
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  32363108 ctctacaaatagagacttggatcatttgatttggacacag 32363147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 205
Target Start/End: Original strand, 25670460 - 25670498
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacaca 205  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  25670460 ctctataaatagagacttggatcatttcatttggacaca 25670498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Complemental strand, 2300237 - 2300200
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacaca 205  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  2300237 tctataaatagagatttggttcatttgatttagacaca 2300200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 205
Target Start/End: Original strand, 8680970 - 8681007
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacaca 205  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  8680970 tctataaatagggacatggttcatttgatttggacaca 8681007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 42804440 - 42804477
Alignment:
Q  169 ctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||  |||||||||||||||||||    
T  42804440 ctataaatagagacttgaatcatttgatttggacacag 42804477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 13479242 - 13479282
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||| ||||||| |||||| |||||||||||||||||||    
T  13479242 cctctacaaatagaaacttggatcatttgatttggacacag 13479282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Complemental strand, 23089954 - 23089914
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||| |||||||||||||| |||||| ||||||||||||    
T  23089954 cctctacaaatagagacttggatcatttaatttggacacag 23089914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 206
Target Start/End: Original strand, 27405836 - 27405876
Alignment:
Q  166 cctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||   |||||||||||||||||||    
T  27405836 cctctataaatagagacttaaatcatttgatttggacacag 27405876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 6370 - 6409
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  6370 ctctataaatagagacttggttcatttgatttggacacag 6409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 109868 - 109907
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  109868 ctctataaatagagacttggatcatttgatttggacacag 109907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1183 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1183
Description:

Target: scaffold1183; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 206
Target Start/End: Complemental strand, 64 - 26
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  64 tctataaatagatacttggttcatttgatttggacacag 26  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 250
Target Start/End: Complemental strand, 124458 - 124376
Alignment:
Q  168 tctataaatagagacttggttcatttgatttggacacagnnnnnnnnctaagtttttcactatcttcttcttattattatctt 250  Q
    ||||||||||||||||||||| ||||||||||||||| |        | |||||||| ||||||||  |||||||||||||||    
T  124458 tctataaatagagacttggtttatttgatttggacaccgaaaaaaatccaagttttttactatcttaatcttattattatctt 124376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold1905
Description:

Target: scaffold1905; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 203
Target Start/End: Complemental strand, 349 - 313
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggaca 203  Q
    |||||||||||||||||||| ||||||||||||||||    
T  349 ctctataaatagagacttggatcatttgatttggaca 313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Original strand, 1085 - 1124
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    ||||| |||||||||||||| |||||||||||||||||||    
T  1085 ctctacaaatagagacttggatcatttgatttggacacag 1124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 206
Target Start/End: Complemental strand, 106254 - 106215
Alignment:
Q  167 ctctataaatagagacttggttcatttgatttggacacag 206  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  106254 ctctataaatagagacttggatcatttgatttgcacacag 106215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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