View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3489_low_25 (Length: 241)

Name: NF3489_low_25
Description: NF3489
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3489_low_25
NF3489_low_25
[»] chr7 (31 HSPs)
chr7 (108-225)||(22737556-22737673)
chr7 (109-225)||(25218770-25218886)
chr7 (109-225)||(21654841-21654956)
chr7 (108-176)||(48984950-48985018)
chr7 (108-175)||(24793535-24793602)
chr7 (108-225)||(22191215-22191330)
chr7 (108-176)||(30630775-30630843)
chr7 (108-176)||(38970076-38970144)
chr7 (108-176)||(43571054-43571123)
chr7 (117-173)||(35193089-35193145)
chr7 (108-176)||(114533-114601)
chr7 (108-223)||(36518511-36518626)
chr7 (108-176)||(25038554-25038622)
chr7 (108-225)||(5813092-5813210)
chr7 (108-170)||(26013160-26013222)
chr7 (108-215)||(40302451-40302559)
chr7 (108-171)||(35029069-35029132)
chr7 (109-222)||(42881355-42881469)
chr7 (108-224)||(43202097-43202217)
chr7 (108-223)||(37887843-37887959)
chr7 (108-223)||(47159455-47159570)
chr7 (108-171)||(20354272-20354335)
chr7 (108-171)||(33078745-33078808)
chr7 (108-171)||(1940632-1940695)
chr7 (108-223)||(26812109-26812226)
chr7 (109-171)||(39769778-39769840)
chr7 (108-223)||(45549579-45549695)
chr7 (108-171)||(30566649-30566712)
chr7 (108-171)||(30720169-30720232)
chr7 (108-223)||(32748793-32748909)
chr7 (108-171)||(37951798-37951861)
[»] chr3 (53 HSPs)
chr3 (108-225)||(42601756-42601873)
chr3 (108-225)||(25832685-25832801)
chr3 (108-225)||(35423970-35424087)
chr3 (108-225)||(41890530-41890646)
chr3 (109-225)||(42601467-42601582)
chr3 (108-211)||(49823131-49823234)
chr3 (108-226)||(46572886-46573004)
chr3 (108-225)||(51427096-51427212)
chr3 (108-227)||(25450595-25450714)
chr3 (109-225)||(33748680-33748796)
chr3 (108-176)||(37410380-37410448)
chr3 (108-176)||(49357458-49357526)
chr3 (108-225)||(33934987-33935102)
chr3 (108-176)||(15493783-15493851)
chr3 (109-211)||(20139369-20139473)
chr3 (108-223)||(49147249-49147364)
chr3 (108-176)||(35853152-35853221)
chr3 (108-173)||(49407298-49407363)
chr3 (108-176)||(49710349-49710418)
chr3 (108-176)||(50033711-50033779)
chr3 (108-173)||(28410441-28410507)
chr3 (108-222)||(138973-139089)
chr3 (109-176)||(43022692-43022760)
chr3 (108-225)||(25790735-25790853)
chr3 (109-175)||(33795457-33795523)
chr3 (108-223)||(30418390-30418505)
chr3 (108-176)||(30862758-30862826)
chr3 (108-225)||(5845100-5845218)
chr3 (108-225)||(17466510-17466628)
chr3 (108-223)||(6048656-6048772)
chr3 (108-222)||(6832382-6832497)
chr3 (108-176)||(44995262-44995330)
chr3 (108-176)||(47701023-47701091)
chr3 (108-171)||(55026789-55026852)
chr3 (108-225)||(47144168-47144286)
chr3 (108-225)||(50017048-50017159)
chr3 (108-214)||(50176047-50176152)
chr3 (108-223)||(12974665-12974782)
chr3 (108-223)||(26165514-26165630)
chr3 (111-171)||(42258376-42258437)
chr3 (108-223)||(50415790-50415906)
chr3 (108-160)||(26550096-26550147)
chr3 (108-222)||(41183272-41183387)
chr3 (108-211)||(7521098-7521201)
chr3 (110-223)||(36178666-36178780)
chr3 (108-161)||(48886946-48886999)
chr3 (108-223)||(29701679-29701795)
chr3 (108-160)||(38572114-38572166)
chr3 (111-160)||(53722452-53722500)
chr3 (108-171)||(11908069-11908132)
chr3 (108-222)||(27847407-27847522)
chr3 (108-171)||(51304388-51304451)
chr3 (108-171)||(28155186-28155251)
[»] chr2 (32 HSPs)
chr2 (108-225)||(37245496-37245613)
chr2 (109-224)||(1987115-1987230)
chr2 (108-223)||(31192945-31193060)
chr2 (112-225)||(9074190-9074302)
chr2 (108-224)||(927853-927969)
chr2 (108-225)||(38901715-38901832)
chr2 (108-226)||(13151444-13151564)
chr2 (108-176)||(31174147-31174215)
chr2 (109-176)||(36855736-36855803)
chr2 (108-171)||(43495678-43495741)
chr2 (108-225)||(12855014-12855132)
chr2 (108-225)||(30822544-30822662)
chr2 (108-227)||(39433973-39434092)
chr2 (108-173)||(5146672-5146737)
chr2 (108-226)||(14152027-14152147)
chr2 (108-223)||(39490140-39490255)
chr2 (109-171)||(1073045-1073107)
chr2 (108-225)||(4296732-4296850)
chr2 (108-225)||(24997075-24997193)
chr2 (108-223)||(22351575-22351691)
chr2 (108-223)||(43021738-43021854)
chr2 (108-171)||(6363003-6363067)
chr2 (108-171)||(9117862-9117925)
chr2 (111-171)||(16218829-16218889)
chr2 (108-225)||(8852052-8852170)
chr2 (108-171)||(36209436-36209498)
chr2 (108-171)||(7588463-7588526)
chr2 (109-223)||(17929217-17929332)
chr2 (109-160)||(6333351-6333402)
chr2 (108-222)||(14382965-14383080)
chr2 (108-168)||(1308658-1308718)
chr2 (108-171)||(44280042-44280105)
[»] chr5 (36 HSPs)
chr5 (109-225)||(8176265-8176381)
chr5 (108-224)||(41152967-41153083)
chr5 (108-211)||(4577012-4577115)
chr5 (108-219)||(25652812-25652923)
chr5 (112-222)||(14278825-14278935)
chr5 (108-225)||(41263355-41263472)
chr5 (108-211)||(10569771-10569874)
chr5 (108-176)||(27407705-27407773)
chr5 (108-223)||(37882392-37882505)
chr5 (115-226)||(8681256-8681367)
chr5 (108-176)||(11954819-11954887)
chr5 (108-176)||(15972609-15972677)
chr5 (109-176)||(25032395-25032462)
chr5 (108-225)||(31013804-31013922)
chr5 (109-175)||(34918440-34918506)
chr5 (108-171)||(30648073-30648136)
chr5 (108-223)||(32976537-32976652)
chr5 (110-171)||(4938233-4938295)
chr5 (108-167)||(27407002-27407061)
chr5 (108-223)||(42317883-42317998)
chr5 (108-173)||(42608004-42608070)
chr5 (108-223)||(23089513-23089629)
chr5 (108-223)||(27942486-27942602)
chr5 (108-223)||(29618974-29619090)
chr5 (108-173)||(34529343-34529408)
chr5 (108-223)||(40888889-40889005)
chr5 (108-171)||(4219405-4219468)
chr5 (108-223)||(3454731-3454846)
chr5 (111-223)||(19241311-19241424)
chr5 (108-223)||(25670866-25670982)
chr5 (108-171)||(13479784-13479847)
chr5 (108-171)||(36572380-36572443)
chr5 (108-213)||(7651008-7651114)
chr5 (108-220)||(31008345-31008458)
chr5 (131-176)||(12912912-12912957)
chr5 (108-171)||(42806960-42807023)
[»] chr1 (36 HSPs)
chr1 (109-225)||(44929252-44929368)
chr1 (108-225)||(44651065-44651181)
chr1 (108-211)||(44451231-44451334)
chr1 (108-225)||(8464090-8464207)
chr1 (109-225)||(17783368-17783484)
chr1 (108-225)||(41542321-41542436)
chr1 (108-225)||(643783-643899)
chr1 (112-176)||(52933733-52933797)
chr1 (112-176)||(52941368-52941432)
chr1 (114-225)||(44334280-44334391)
chr1 (119-223)||(48729315-48729419)
chr1 (108-211)||(20584812-20584915)
chr1 (108-176)||(40500439-40500507)
chr1 (108-175)||(36303023-36303090)
chr1 (108-225)||(45239129-45239247)
chr1 (108-171)||(45456111-45456174)
chr1 (108-225)||(27630420-27630538)
chr1 (108-225)||(37420304-37420422)
chr1 (112-211)||(36230362-36230462)
chr1 (108-223)||(48388068-48388184)
chr1 (108-223)||(2478289-2478404)
chr1 (108-222)||(31159381-31159496)
chr1 (109-222)||(29919364-29919479)
chr1 (108-225)||(31468124-31468242)
chr1 (108-225)||(3754984-3755106)
chr1 (108-211)||(48404335-48404439)
chr1 (108-171)||(37822616-37822679)
chr1 (108-171)||(51494432-51494495)
chr1 (108-222)||(8468318-8468433)
chr1 (108-171)||(33164458-33164521)
chr1 (108-171)||(37646520-37646583)
chr1 (108-211)||(14096696-14096800)
chr1 (108-171)||(23092815-23092878)
chr1 (108-171)||(37691250-37691313)
chr1 (108-167)||(51156848-51156906)
chr1 (131-167)||(51520267-51520303)
[»] chr8 (39 HSPs)
chr8 (108-225)||(18029460-18029577)
chr8 (108-225)||(36912410-36912527)
chr8 (108-225)||(41477176-41477293)
chr8 (108-225)||(17741705-17741822)
chr8 (108-225)||(34955627-34955743)
chr8 (113-225)||(8609947-8610059)
chr8 (109-225)||(30470780-30470896)
chr8 (108-225)||(5212285-5212401)
chr8 (108-176)||(7990473-7990541)
chr8 (108-225)||(4625455-4625572)
chr8 (108-176)||(5735329-5735397)
chr8 (114-225)||(26632120-26632231)
chr8 (112-225)||(26749373-26749486)
chr8 (108-225)||(38584855-38584972)
chr8 (108-225)||(42860708-42860824)
chr8 (108-176)||(13814989-13815057)
chr8 (108-220)||(29637116-29637228)
chr8 (112-176)||(39811023-39811087)
chr8 (108-171)||(17494515-17494578)
chr8 (109-176)||(30289692-30289759)
chr8 (108-223)||(43524351-43524467)
chr8 (108-176)||(24431827-24431894)
chr8 (108-171)||(31129462-31129526)
chr8 (108-223)||(35931857-35931972)
chr8 (113-223)||(1958146-1958256)
chr8 (109-171)||(12272443-12272505)
chr8 (108-225)||(35099428-35099546)
chr8 (109-222)||(45100986-45101100)
chr8 (108-223)||(40283470-40283586)
chr8 (108-211)||(42859932-42860036)
chr8 (108-171)||(23549761-23549824)
chr8 (108-225)||(43618309-43618427)
chr8 (114-171)||(43525055-43525112)
chr8 (111-171)||(13947414-13947474)
chr8 (108-171)||(15053680-15053743)
chr8 (108-171)||(44149918-44149981)
chr8 (108-173)||(30532411-30532475)
chr8 (108-223)||(26244492-26244608)
chr8 (108-171)||(29731742-29731805)
[»] chr4 (45 HSPs)
chr4 (108-225)||(53184057-53184173)
chr4 (108-225)||(31848735-31848851)
chr4 (109-176)||(10089890-10089957)
chr4 (108-223)||(54356857-54356972)
chr4 (108-175)||(39049044-39049111)
chr4 (108-211)||(39113716-39113819)
chr4 (114-225)||(47750192-47750302)
chr4 (109-223)||(12158134-12158248)
chr4 (108-225)||(33526711-33526828)
chr4 (109-173)||(40596724-40596788)
chr4 (109-175)||(39533243-39533309)
chr4 (108-176)||(55408529-55408598)
chr4 (108-176)||(19409174-19409242)
chr4 (108-176)||(51392272-51392340)
chr4 (108-173)||(53348021-53348086)
chr4 (108-225)||(2215242-2215360)
chr4 (108-171)||(18469328-18469390)
chr4 (108-225)||(46917471-46917589)
chr4 (122-224)||(34564119-34564221)
chr4 (108-224)||(40721030-40721147)
chr4 (108-223)||(3533267-3533383)
chr4 (108-223)||(34199229-34199345)
chr4 (108-223)||(3618414-3618529)
chr4 (108-176)||(36656601-36656669)
chr4 (108-222)||(38173552-38173667)
chr4 (108-222)||(55560439-55560554)
chr4 (108-223)||(45081371-45081488)
chr4 (108-223)||(6290596-6290712)
chr4 (108-223)||(8991779-8991895)
chr4 (108-171)||(23540386-23540449)
chr4 (108-171)||(27142290-27142353)
chr4 (108-171)||(28899381-28899444)
chr4 (108-171)||(33604706-33604769)
chr4 (108-171)||(48506566-48506629)
chr4 (108-223)||(13094350-13094466)
chr4 (108-223)||(16020843-16020959)
chr4 (116-176)||(55885-55944)
chr4 (108-171)||(13110610-13110673)
chr4 (108-167)||(33077834-33077893)
chr4 (108-171)||(34463984-34464046)
chr4 (108-171)||(48403859-48403923)
chr4 (109-171)||(52017393-52017457)
chr4 (108-223)||(16174975-16175091)
chr4 (110-171)||(23389890-23389952)
chr4 (108-171)||(27863764-27863827)
[»] chr6 (23 HSPs)
chr6 (109-225)||(29428480-29428596)
chr6 (108-225)||(6380450-6380566)
chr6 (109-176)||(6725586-6725654)
chr6 (108-223)||(8669885-8670000)
chr6 (108-225)||(631511-631629)
chr6 (108-171)||(8218993-8219056)
chr6 (109-176)||(32359788-32359855)
chr6 (108-225)||(34328274-34328392)
chr6 (109-167)||(25834617-25834675)
chr6 (108-222)||(30446240-30446355)
chr6 (108-211)||(34838588-34838691)
chr6 (109-173)||(22627881-22627946)
chr6 (108-171)||(2503273-2503336)
chr6 (108-171)||(12512961-12513024)
chr6 (108-225)||(197797-197915)
chr6 (108-172)||(34242353-34242417)
chr6 (121-223)||(8660554-8660657)
chr6 (108-222)||(10883868-10883983)
chr6 (108-171)||(12501880-12501943)
chr6 (108-171)||(24348481-24348544)
chr6 (108-171)||(26654296-26654359)
chr6 (108-171)||(26760266-26760329)
chr6 (108-225)||(17961224-17961342)
[»] scaffold0100 (1 HSPs)
scaffold0100 (108-225)||(30499-30616)
[»] scaffold0012 (1 HSPs)
scaffold0012 (113-225)||(124009-124119)
[»] scaffold0054 (1 HSPs)
scaffold0054 (111-222)||(57706-57818)
[»] scaffold0016 (1 HSPs)
scaffold0016 (108-171)||(66032-66095)


Alignment Details
Target: chr7 (Bit Score: 74; Significance: 5e-34; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 22737556 - 22737673
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||        |||| || |||||||||||||||    
T  22737556 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgaatgttgaataagagagagaaaatgatgtggagtgttgggaattga 22737655  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||| ||| |||||||||    
T  22737656 aaaagtgggtgttgaatg 22737673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 109 - 225
Target Start/End: Original strand, 25218770 - 25218886
Alignment:
Q  109 tggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattgaa 208  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||        |||||||||||||||| |||||||    
T  25218770 tggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttaaatgagtattgaataagagagagaaaatgatatgaagtgttggaaattgaa 25218869  T
Q  209 aaaatggatgttgaatg 225  Q
    ||| |||||||| ||||    
T  25218870 aaagtggatgttaaatg 25218886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 109 - 225
Target Start/End: Complemental strand, 21654956 - 21654841
Alignment:
Q  109 tggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattgaa 208  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||        |||| || |||||||| |||||||    
T  21654956 tggtggggtagagtgttgaatgaaaaaccattggagagggtaaatgttgaatgagtgttgaataagagagagaaaatgatgtggagtgttggaaattgaa 21654857  T
Q  209 aaaatggatgttgaatg 225  Q
    ||| ||| |||||||||    
T  21654856 aaagtgg-tgttgaatg 21654841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 48985018 - 48984950
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  48985018 gtggtggggtagagtgttgaatgaaaaaccattggagatggtaaatgttgaatgagtgttgaataagag 48984950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 175
Target Start/End: Complemental strand, 24793602 - 24793535
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataaga 175  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  24793602 gtggtggggtagagtgttgaatgaaaaaccattggagagtgtaaaagttgaatgagtgttgaataaga 24793535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 22191330 - 22191215
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||        |||| || |||||||| ||||||    
T  22191330 gtggtggggtagagtgttgaatgaaaa-ccattggagagggtaaaagttgaatgagtgttgaataagagagagaaaatgatgtggagtgttggaaattga 22191232  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||| ||| |||||||||    
T  22191231 aaaagtgg-tgttgaatg 22191215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 30630775 - 30630843
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||    
T  30630775 gtggtggggtagagtgttgaatgaaaaaccattggagagagtaaaagttgaatgagtattgaataagag 30630843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 38970144 - 38970076
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    |||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  38970144 gtggtggggtagggtgttgaatgaaaaatcattggagacggtaaaagttgaatgagtgttgaataagag 38970076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 43571054 - 43571123
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaa-accattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    ||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||    
T  43571054 gtggtggggtagagtgttgaatgaaaaaaccattggagatagtaaaagttgaatgagtgttgaataagag 43571123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 173
Target Start/End: Original strand, 35193089 - 35193145
Alignment:
Q  117 tagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataa 173  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  35193089 tagagtgttgaatgaaaaaccattggagatggtaaaagttgaatgagtgttgaataa 35193145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 114601 - 114533
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    ||||||||||| ||| |||||||||||||||||||||| | |||||||| |||||||||||||||||||    
T  114601 gtggtggggtaaagtattgaatgaaaaaccattggagatgataaaagttaaatgagtgttgaataagag 114533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 36518626 - 36518511
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaattg 206  Q
    |||||||||||| ||||||||| |||||||||||||| |||||||| |||||||||||||||| ||||||        |||| || ||||||||||||||    
T  36518626 gtggtggggtagggtgttgaataaaaaaccattggag-aggtaaaaattgaatgagtgttgaattaagagagagaaaatgatgtggagtgttgggaattg 36518528  T
Q  207 aaaaaatggatgttgaa 223  Q
    ||||| ||| |||||||    
T  36518527 aaaaagtgggtgttgaa 36518511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 25038554 - 25038622
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    |||||| |||| | |||||||||||||||||||||||| ||||||| |||||||||||| |||||||||    
T  25038554 gtggtgaggtaaaatgttgaatgaaaaaccattggagagggtaaaacttgaatgagtgtcgaataagag 25038622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 5813210 - 5813092
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||||| |||||| ||||||||| ||||||        |||| || |||||||||||||    
T  5813210 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaataagtgttgaattaagagagagaaaatgatgtgcagtgttgggaatt 5813112  T
Q  206 gaaaaaatggatgttgaatg 225  Q
    |||||| ||| |||||||||    
T  5813111 gaaaaagtgggtgttgaatg 5813092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 170
Target Start/End: Original strand, 26013160 - 26013222
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaa 170  Q
    ||||||||||| |||||||||||||||| |||||||||  ||||||||||||||||| |||||    
T  26013160 gtggtggggtaaagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtattgaa 26013222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 40302451 - 40302559
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaa-ccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||  ||||||||||||||| |||||||||| ||||||| |||||||||||||||| ||||||        |||| || |||||||||||||    
T  40302451 gtggtggggtaaggtgttgaatgaaaaaaccattggaga-ggtaaaaattgaatgagtgttgaattaagagagagaaaatgatgtggagtgttgggaatt 40302549  T
Q  206 gaaaaaatgg 215  Q
    ||||||||||    
T  40302550 gaaaaaatgg 40302559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 35029069 - 35029132
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  35029069 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgagtgttgaat 35029132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 222
Target Start/End: Complemental strand, 42881469 - 42881355
Alignment:
Q  109 tggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaattg 206  Q
    ||||||||||| ||||||||||| ||||||||||||| |||||||| ||||||  |||||||| ||||||        |||| || ||||||||||||||    
T  42881469 tggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaattggtgttgaattaagagagagaaaatgatgtggagtgttgggaattg 42881371  T
Q  207 aaaaaatggatgttga 222  Q
    ||||| ||||||||||    
T  42881370 aaaaagtggatgttga 42881355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 224
Target Start/End: Original strand, 43202097 - 43202217
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttg---aatgagtgttgaataagagnnnnnnnntgatatgaagtg-ttgggaa 203  Q
    ||||||| ||||| |||||||| ||||||||||||||| |||||||||||   |||||||||||| ||||||        | || ||||||| ||||| |    
T  43202097 gtggtggagtagaatgttgaataaaaaaccattggagagggtaaaagttgaataatgagtgttgagtaagagagagaaaataatgtgaagtgattgggca 43202196  T
Q  204 ttgaaaaaatggatgttgaat 224  Q
    |||||||| ||||||||||||    
T  43202197 ttgaaaaagtggatgttgaat 43202217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 37887959 - 37887843
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaacc-attggagaaggtaaaagttgaatgagtgttgaat-aagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||||||||||||||||||| | |||| ||| ||||||| || ||||  |||||||| |||||        |||| || |||||||||||||    
T  37887959 gtggtggggtagagtgttgaatgaaaaaactattgaaga-ggtaaaaattaaatggatgttgaattaagagagataaaatgatgtggagtgttgggaatt 37887861  T
Q  206 gaaaaaatggatgttgaa 223  Q
    ||||||||||||||||||    
T  37887860 gaaaaaatggatgttgaa 37887843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 47159455 - 47159570
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||| ||||||| |||||||| ||||||        |||| || |||||||||||||    
T  47159455 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgttgaattaagagagagaaaatgatgtggagtgttgggaatt 47159553  T
Q  206 gaaaaaatggatgttgaa 223  Q
     ||||| |||||||||||    
T  47159554 -aaaaagtggatgttgaa 47159570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 20354335 - 20354272
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||||| ||||||| |||||||||    
T  20354335 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgttgaat 20354272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 33078745 - 33078808
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||||| |||||||| ||||||||    
T  33078745 gtggtggggtagagtgttgaatgaaaaaactattggag-aggtaaaaattgaatgaatgttgaat 33078808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 1940632 - 1940695
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    ||||||||||| ||||||| ||||||| | |||| ||| |||||||||||||| ||||||||||    
T  1940632 gtggtggggtaaagtgttgtatgaaaatctattgaagagggtaaaagttgaataagtgttgaat 1940695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 26812226 - 26812109
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaa--ccattggagaaggtaaaagttgaatgagtgttgaataa-gagnnnnnnnntgatatgaagtgttgggaat 204  Q
    ||||||||||||  ||||||||||||||  |||||||||| ||||||| |||||||||| |||||| | ||         ||||||| ||||||||||||    
T  26812226 gtggtggggtaggatgttgaatgaaaaaaaccattggaga-ggtaaaatttgaatgagtattgaattatgaaagataaaatgatatggagtgttgggaat 26812128  T
Q  205 tgaaaaaatggatgttgaa 223  Q
    ||||||||||| |||||||    
T  26812127 tgaaaaaatgggtgttgaa 26812109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 171
Target Start/End: Complemental strand, 39769840 - 39769778
Alignment:
Q  109 tggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    ||||||||||| ||||||||||| ||||||||| ||| |||||||| |||||||||||||||||    
T  39769840 tggtggggtagggtgttgaatgaaaaaaccattagag-aggtaaaaattgaatgagtgttgaat 39769778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 45549579 - 45549695
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| |||||||||| |||||| ||||||| |||||||| ||||||| |||||||| || |||        |||| || |||||||||||||    
T  45549579 gtggtggggtagggtgttgaatgaaaaaactattggag-aggtaaaaattgaatgggtgttgaattatgagagaaaaaatgatgtggagtgttgggaatt 45549677  T
Q  206 gaaaaaatggatgttgaa 223  Q
    |||||| ||| |||||||    
T  45549678 gaaaaagtggttgttgaa 45549695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 30566712 - 30566649
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||| ||||||||||||||||||| ||||| ||||||| || ||||| |||||||||||||||||    
T  30566712 gtggcggggtagagtgttgaatgaaaaaactattggag-agataaaaattgaatgagtgttgaat 30566649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 30720232 - 30720169
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||| ||||||||||| |||||||||| || |||||||| ||||||| |||||||||    
T  30720232 gtggtggggtagggtgttgaatgaaaaaaccattgaag-aggtaaaaattgaatgggtgttgaat 30720169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 32748909 - 32748793
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||| |||| |||||||| | |||||| ||||||||||||| || || |||        | || || |||||||||||||    
T  32748909 gtggtggggtagggtgttgaatgaaaaaatcattggag-atgtaaaaattgaatgagtgttaaattatgagagagaaaataatgtggagtgttgggaatt 32748811  T
Q  206 gaaaaaatggatgttgaa 223  Q
    |||||||| |||||||||    
T  32748810 gaaaaaatagatgttgaa 32748793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 37951861 - 37951798
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||| ||  ||||||||||| ||||||||||||| |||||||| ||||||| |||||||||    
T  37951861 gtggtgggataaggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgttgaat 37951798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 5e-34; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 42601873 - 42601756
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||| || |||||||||||||||    
T  42601873 gtggtagggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagagagaaaatgatgtggagtgttgggaattga 42601774  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||| ||| |||||||||    
T  42601773 aaaagtgggtgttgaatg 42601756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 25832685 - 25832801
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||        |||| ||||||||||||||||||    
T  25832685 gtggtggggtagagtgttgaatgaaaaaccattggagggggtaaaagttgaatgagtgttgaataagagagagaaaatgatgtgaagtgttgggaattga 25832784  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||| ||| |||||||||    
T  25832785 aaaagtgg-tgttgaatg 25832801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 35423970 - 35424087
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    ||||||||||| ||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||        |||| || |||||||||||||||    
T  35423970 gtggtggggtaaagtgttgaatgaaaaaccatttgagagggtaaaagtcgaatgagtgttgaataagagagaaaaaatgatgtggagtgttgggaattga 35424069  T
Q  208 aaaaatggatgttgaatg 225  Q
    ||||||||||||||||||    
T  35424070 aaaaatggatgttgaatg 35424087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 41890646 - 41890530
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||        |||| || |||||||||||||||    
T  41890646 gtggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaataagagagagaaaatgatgtggagtgttgggaattga 41890547  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||| | |||||||||||    
T  41890546 aaaagt-gatgttgaatg 41890530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 109 - 225
Target Start/End: Original strand, 42601467 - 42601582
Alignment:
Q  109 tggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattgaa 208  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||        |||| || ||||||||||||||||    
T  42601467 tggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaataagagagagaaaatgatgtggagtgttgggaattgaa 42601566  T
Q  209 aaaatggatgttgaatg 225  Q
    ||| ||| |||||||||    
T  42601567 aaagtgg-tgttgaatg 42601582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 49823131 - 49823234
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||        |||| || |||||||||||||||    
T  49823131 gtggtggggtagagtgttgaatgaaaaaccattggagatggtaaaagttgaatgagtgttgaataagagagagaaaatgatgtggagtgttgggaattga 49823230  T
Q  208 aaaa 211  Q
    ||||    
T  49823231 aaaa 49823234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 108 - 226
Target Start/End: Original strand, 46572886 - 46573004
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||        |||| || |||||||||||||||    
T  46572886 gtggtggggtagagtgttgaatgaaaaactattggagagggtaaaagttgaatgagtcttgaataagagagagaaaatgatgtggagtgttgggaattga 46572985  T
Q  208 aaaaatggatgttgaatgt 226  Q
    |||| ||| ||||||||||    
T  46572986 aaaagtgggtgttgaatgt 46573004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 51427212 - 51427096
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||        |||| || |||||||||||||||    
T  51427212 gtggtggggtaaagtgttgaatgaaaaaccattggagatggtaaaagttgaatgagtgttgaataagagagagaaaatgatgtggagtgttgggaattga 51427113  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||| ||| |||||||||    
T  51427112 aaaagtgg-tgttgaatg 51427096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 227
Target Start/End: Original strand, 25450595 - 25450714
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    ||||||||||||||||||||||||||||| |||||||| | |||||||||||||| |||||||||||||        |||| || || ||||||||||||    
T  25450595 gtggtggggtagagtgttgaatgaaaaactattggagaggataaaagttgaatgaatgttgaataagagagagaaaatgatgtggagcgttgggaattga 25450694  T
Q  208 aaaaatggatgttgaatgtg 227  Q
    |||||||| |||||||||||    
T  25450695 aaaaatgggtgttgaatgtg 25450714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 109 - 225
Target Start/End: Complemental strand, 33748796 - 33748680
Alignment:
Q  109 tggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattgaa 208  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||        |||| || |||||||| |||||||    
T  33748796 tggtgggatagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgagtaaaagagagaaaatgatgtggagtgttggaaattgaa 33748697  T
Q  209 aaaatggatgttgaatg 225  Q
    ||||| | |||||||||    
T  33748696 aaaataggtgttgaatg 33748680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 37410380 - 37410448
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  37410380 gtggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgaatgttgaataagag 37410448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 49357458 - 49357526
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  49357458 gtggtggggtagagtattgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaataagag 49357526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 33935102 - 33934987
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||        |||| || |||||||||||||||    
T  33935102 gtggtggggtagagtgttgaatgaaaa-ccattggagagggtaaaagttgattgagtgttgaataagagagagaaaatgatgtggagtgttgggaattga 33935004  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||| ||| |||||||||    
T  33935003 aaaagtgg-tgttgaatg 33934987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 15493783 - 15493851
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||||||||    
T  15493783 gtggtggggtagagtgttgaatgaaaaatcattggagatggtaaaagttgaatgaatgttgaataagag 15493851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 109 - 211
Target Start/End: Complemental strand, 20139473 - 20139369
Alignment:
Q  109 tggtggggtagagtgttgaatgaaaaa-ccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaattg 206  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||        |||| |||||||||| ||||||    
T  20139473 tggtggggtagagtgttgaatgaaaaaaccattggagaaggtaaaagttgaatgagtgttgaattaagagagagaaaatgatgtgaagtgttgagaattg 20139374  T
Q  207 aaaaa 211  Q
    |||||    
T  20139373 aaaaa 20139369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 49147249 - 49147364
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    |||||||||| | ||||||||||||||| ||||| | ||||||||||||||||||||||||||||||||        |||| || |||||||||||||||    
T  49147249 gtggtggggttgggtgttgaatgaaaaatcattgaaaaaggtaaaagttgaatgagtgttgaataagagagagaaaatgatgtggagtgttgggaattga 49147348  T
Q  208 aaaaatggatgttgaa 223  Q
    |||| | |||||||||    
T  49147349 aaaagtagatgttgaa 49147364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 35853152 - 35853221
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaa-accattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    ||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||    
T  35853152 gtggtggggtagagtgttgaatgaaaaaaccattggagatagtaaaagttgaatgagtgttgaataagag 35853221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 49407298 - 49407363
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataa 173  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  49407298 gtggtggggtagggtgttgaatgaaaaaccattgaagaaggtaaaagttgaatgagtattgaataa 49407363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 49710349 - 49710418
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaa-accattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    ||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||    
T  49710349 gtggtggggtagagtgttgaatgaaaaaaccattggagatagtaaaagttgaatgagtgttgaataagag 49710418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 50033779 - 50033711
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    ||||||||||| |||||||||||||||| |||||||||  |||||||||||||||||||||||||||||    
T  50033779 gtggtggggtatagtgttgaatgaaaaatcattggagagagtaaaagttgaatgagtgttgaataagag 50033711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 108 - 173
Target Start/End: Complemental strand, 28410507 - 28410441
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaac-cattggagaaggtaaaagttgaatgagtgttgaataa 173  Q
    ||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||    
T  28410507 gtggtggggtagagtgttgaatgaaaaaatcattggagatggtaaaagttgaatgagtgttgaataa 28410441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 139089 - 138973
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaac-cattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||||||||||||| |||||  ||||||||| |||||||||||||||||||||||| ||||||        |||| || |||||||||||||    
T  139089 gtggtggggtagagtgttgaattaaaaaatcattggagagggtaaaagttgaatgagtgttgaattaagagagacaaaatgatgtggagtgttgggaatt 138990  T
Q  206 gaaaaaatggatgttga 222  Q
    ||||||  |||||||||    
T  138989 gaaaaagcggatgttga 138973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 43022760 - 43022692
Alignment:
Q  109 tggtggggtagagtgttgaatgaaaaa-ccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    ||||||||||||||||||||||||||| |||||| |||  |||||||||||||||||||||||||||||    
T  43022760 tggtggggtagagtgttgaatgaaaaaaccattgaagatagtaaaagttgaatgagtgttgaataagag 43022692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 25790735 - 25790853
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaat-aagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||| ||||||||||||||||| |||||        |||| || |||||||||||||    
T  25790735 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgagtgttgaatgaagagagagaaaatgatgtggagtgttgggaatt 25790833  T
Q  206 gaaaaaatggatgttgaatg 225  Q
    |||||| ||| |||||||||    
T  25790834 gaaaaagtgggtgttgaatg 25790853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 175
Target Start/End: Original strand, 33795457 - 33795523
Alignment:
Q  109 tggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataaga 175  Q
    ||||| |||||||||||||||||||||| |||| |||  ||||||||||||||||||||||||||||    
T  33795457 tggtgcggtagagtgttgaatgaaaaactattgaagagagtaaaagttgaatgagtgttgaataaga 33795523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 30418390 - 30418505
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaattg 206  Q
    |||||||||||| ||||||||| |||||||||||||| |||||||| ||||||| |||||||| ||||||        |||| || ||||||||||||||    
T  30418390 gtggtggggtagggtgttgaataaaaaaccattggag-aggtaaaaattgaatgggtgttgaattaagagagagaaaatgatgtggagtgttgggaattg 30418488  T
Q  207 aaaaaatggatgttgaa 223  Q
    ||||| ||| |||||||    
T  30418489 aaaaagtgggtgttgaa 30418505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 30862758 - 30862826
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    ||||||| |||||||||||||||||||| ||||||||| ||||||  || |||||||||||||||||||    
T  30862758 gtggtggagtagagtgttgaatgaaaaatcattggagagggtaaatattaaatgagtgttgaataagag 30862826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 5845100 - 5845218
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| |||||||||| |||||||||||||| | |||||| |||||||||||||||| ||||||        |||| || |||||||||||||    
T  5845100 gtggtggggtagggtgttgaatgaaaaaaccattggag-atgtaaaaattgaatgagtgttgaattaagagagataaaatgatgtggagtgttgggaatt 5845198  T
Q  206 gaaaaaatggatgttgaatg 225  Q
    |||||| ||| |||||||||    
T  5845199 gaaaaagtgggtgttgaatg 5845218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 17466628 - 17466510
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||||| ||||||| |||||||| ||||||        |||| || |||||||||||||    
T  17466628 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgttgaattaagagagagaaaatgatgtggagtgttgggaatt 17466530  T
Q  206 gaaaaaatggatgttgaatg 225  Q
    |||||| ||| |||||||||    
T  17466529 gaaaaagtgggtgttgaatg 17466510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 6048656 - 6048772
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||| ||||||| |||||||| ||||||        |||| || |||||||||||||    
T  6048656 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgttgaattaagagagagaaaatgatgtggagtgttgggaatt 6048754  T
Q  206 gaaaaaatggatgttgaa 223  Q
    |||||| ||| |||||||    
T  6048755 gaaaaagtgggtgttgaa 6048772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 6832497 - 6832382
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    ||||||||||||| |||||||||| ||||||||||||| || ||||| |||||||||||||||| ||| ||        |||| || |||||||||||||    
T  6832497 gtggtggggtagaatgttgaatgaaaaaaccattggag-agataaaaattgaatgagtgttgaattaaaagaaagaaaatgatgtggagtgttgggaatt 6832399  T
Q  206 gaaaaaatggatgttga 222  Q
    |||||| ||||||||||    
T  6832398 gaaaaagtggatgttga 6832382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 44995330 - 44995262
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    ||||||| ||| ||||||||||||||||||||||  || |||||||||||||||| |||| ||||||||    
T  44995330 gtggtggagtaaagtgttgaatgaaaaaccattgctgagggtaaaagttgaatgaatgttaaataagag 44995262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 47701023 - 47701091
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    ||||||||||||||||||||| |||||| |  ||||||  ||||||||| |||||||||||||||||||    
T  47701023 gtggtggggtagagtgttgaaagaaaaaaccatggagagagtaaaagtttaatgagtgttgaataagag 47701091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 55026852 - 55026789
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||||| |||||||||||||||||    
T  55026852 gtggtggggtagaatgttgaatgaaaaaaccattggag-aggtaaaaattgaatgagtgttgaat 55026789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 47144286 - 47144168
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||| ||||| ||||||| |||||||| |||||| ||||||||| ||||||        |||| || |||||||||||||    
T  47144286 gtggtggggtagggtgttgaatgaaaaaactattggag-aggtaaaaattgaataagtgttgaattaagagagagaaaatgatgtggagtgttgggaatt 47144188  T
Q  206 gaaaaaatggatgttgaatg 225  Q
    |||||| ||| |||||||||    
T  47144187 gaaaaagtgggtgttgaatg 47144168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 50017159 - 50017048
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    |||||||||||||||||||||||||||| ||      | |||||||||||||||||||||||||||||         |||| |  |||||||||||||||    
T  50017159 gtggtggggtagagtgttgaatgaaaaatca------agggtaaaagttgaatgagtgttgaataagaaagagaaaatgatgtagagtgttgggaattga 50017066  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||| ||||| |||||||    
T  50017065 aaaagtggattttgaatg 50017048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 214
Target Start/End: Original strand, 50176047 - 50176152
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    ||||||||||||| | |||||||||||||||| | |||| |||||||||||||  | ||||||||||||        |||| || |||||||||||||||    
T  50176047 gtggtggggtaga-tattgaatgaaaaaccatcgaagaaagtaaaagttgaatatgcgttgaataagagagataaaatgatgtggagtgttgggaattga 50176145  T
Q  208 aaaaatg 214  Q
    |||||||    
T  50176146 aaaaatg 50176152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 12974782 - 12974665
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||||||||||||||| |||||||||||||| |  ||||  |||||| |||||||| ||||||        |||| || |||||||||||||    
T  12974782 gtggtggggtagagtgttgaatgaaaaaaccattggagaggtaaaaaaatgaatgggtgttgaattaagagagagaaaatgatgtggagtgttgggaatt 12974683  T
Q  206 gaaaaaatggatgttgaa 223  Q
    |||||| ||| |||||||    
T  12974682 gaaaaagtgggtgttgaa 12974665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 26165514 - 26165630
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| || ||||||| |||||||||||||| |||||||| ||||||| |||||||| || |||        |||| || |||||||||||||    
T  26165514 gtggtggggtagggttttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgttgaattatgagagagaaaatgatgtggagtgttgggaatt 26165612  T
Q  206 gaaaaaatggatgttgaa 223  Q
    |||||| |||||||||||    
T  26165613 gaaaaagtggatgttgaa 26165630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 42258437 - 42258376
Alignment:
Q  111 gtggggtagagtgttgaatgaaaaacc-attggagaaggtaaaagttgaatgagtgttgaat 171  Q
    ||||||||||||||||||||||||| | |||| ||| |||||||||||||||| ||||||||    
T  42258437 gtggggtagagtgttgaatgaaaaaactattgaagagggtaaaagttgaatgaatgttgaat 42258376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 50415790 - 50415906
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||| ||||||| |||||||| ||||||        |||| || |||||||| ||||    
T  50415790 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgttgaattaagagagagaaaatgatgtggagtgttggaaatt 50415888  T
Q  206 gaaaaaatggatgttgaa 223  Q
    |||||| ||| |||||||    
T  50415889 gaaaaagtgggtgttgaa 50415906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 26550096 - 26550147
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaat 160  Q
    ||||||| ||||||||||||||||||| |||||||||| ||||||||||||||    
T  26550096 gtggtggagtagagtgttgaatgaaaa-ccattggagagggtaaaagttgaat 26550147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 41183387 - 41183272
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||||| ||| ||| |||||||| ||||||        |||| || |||||||||||||    
T  41183387 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgtatgggtgttgaattaagagagagaaaatgatgtggagtgttgggaatt 41183289  T
Q  206 gaaaaaatggatgttga 222  Q
    |||||| ||| ||||||    
T  41183288 gaaaaagtgggtgttga 41183272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 7521098 - 7521201
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    |||||||||| || |||||||||| ||||||||  |||| |||   |||||||||||||||||||||||        |||| ||||||||||| ||||||    
T  7521098 gtggtggggttgattgttgaatgataaaccattaaagaatgtatttgttgaatgagtgttgaataagagagagaaaatgatctgaagtgttggaaattga 7521197  T
Q  208 aaaa 211  Q
    ||||    
T  7521198 aaaa 7521201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 223
Target Start/End: Original strand, 36178666 - 36178780
Alignment:
Q  110 ggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    |||||||||| |||||||||| |||||||||||||| |||||||| |||||||  ||||||| || |||        |||| ||||||||||||||||||    
T  36178666 ggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatggatgttgaattatgagagagaaaatgatttgaagtgttgggaattga 36178764  T
Q  208 aaaaatggatgttgaa 223  Q
    |||| ||| |||||||    
T  36178765 aaaagtgggtgttgaa 36178780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 161
Target Start/End: Original strand, 48886946 - 48886999
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatg 161  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||| |||||||    
T  48886946 gtggtggggtagagtgttgaatgaaaaaaccattggag-aggtaaaaattgaatg 48886999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 29701795 - 29701679
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    ||||||| |||| ||||||||||| |||||||||||||  ||||||| ||||||| |||||||| ||||||        |||| || |||||||||||||    
T  29701795 gtggtggagtagggtgttgaatgaaaaaaccattggag-gggtaaaaattgaatgggtgttgaattaagagagagaaaatgatgtggagtgttgggaatt 29701697  T
Q  206 gaaaaaatggatgttgaa 223  Q
    |||||| ||| |||||||    
T  29701696 gaaaaagtgggtgttgaa 29701679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 38572114 - 38572166
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaat 160  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||| ||||||    
T  38572114 gtggtggggtagagtgttgaatgaaaaaaccattggag-aggtaaaaattgaat 38572166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 160
Target Start/End: Complemental strand, 53722500 - 53722452
Alignment:
Q  111 gtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaat 160  Q
    |||||||| ||||||||||||||||||||||||||  |||||||||||||    
T  53722500 gtggggta-agtgttgaatgaaaaaccattggagagagtaaaagttgaat 53722452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 11908132 - 11908069
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||| ||||||||||| |||||||||| || |||||||| ||||||| |||||||||    
T  11908132 gtggtggggtagggtgttgaatgaaaaaaccattgaag-aggtaaaaattgaatgggtgttgaat 11908069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 27847522 - 27847407
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||| |||||||||| || |||||||| || |||| |||||||| ||||||        |||| || |||||||| ||||    
T  27847522 gtggtggggtagggtgttgaatgaaaaaaccattgaag-aggtaaaaattaaatgggtgttgaattaagagagagaaaatgatgtggagtgttggaaatt 27847424  T
Q  206 gaaaaaatggatgttga 222  Q
    |||||| ||||||||||    
T  27847423 gaaaaagtggatgttga 27847407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 51304451 - 51304388
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    ||||| |||||||||||||||||| ||||| ||||||| |||||||| ||||||| |||||||||    
T  51304451 gtggtagggtagagtgttgaatgaaaaaactattggag-aggtaaaaattgaatgggtgttgaat 51304388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 28155186 - 28155251
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaag-gtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||||||||||| || ||||||||||||||| |   |||| |||||||||||||||||    
T  28155186 gtggtggggtagagtgttgactgaaaaaaccattggagaggcaaaaaaattgaatgagtgttgaat 28155251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 5e-34; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 37245613 - 37245496
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||        |||| || |||||||||||||||    
T  37245613 gtggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaataagagagagaaaatgatgtggagtgttgggaattga 37245514  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||| ||| |||||||||    
T  37245513 aaaagtgggtgttgaatg 37245496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 109 - 224
Target Start/End: Complemental strand, 1987230 - 1987115
Alignment:
Q  109 tggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattgaa 208  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||        |||| || ||||||| ||||||||    
T  1987230 tggtggggtagagtgttgaatgaaaaatcattggagagggtaaaagttgaatgagtgttgaataagagatagaaaatgatgtggagtgttgagaattgaa 1987131  T
Q  209 aaaatggatgttgaat 224  Q
    ||| || |||||||||    
T  1987130 aaagtgaatgttgaat 1987115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 31192945 - 31193060
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||        |||| || |||||||| ||||||    
T  31192945 gtggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtattgaataagagagagaaaatgatgtggagtgttggaaattga 31193044  T
Q  208 aaaaatggatgttgaa 223  Q
    |||||| | |||||||    
T  31193045 aaaaataggtgttgaa 31193060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 112 - 225
Target Start/End: Original strand, 9074190 - 9074302
Alignment:
Q  112 tggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattgaaaaa 211  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||        |||| || ||||||||||||| |||||    
T  9074190 tggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaataagagagagaaaatgatgtggagtgttgggaattaaaaaa 9074289  T
Q  212 atggatgttgaatg 225  Q
     ||| |||||||||    
T  9074290 gtgg-tgttgaatg 9074302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 224
Target Start/End: Original strand, 927853 - 927969
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    ||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||        |||| || ||||||||||||| |    
T  927853 gtggtggggtagagtgttgaatgaaaaaccattagagagtgtaaaagttgaatgagtgttgaataagagagagaaaatgatgtggagtgttgggaattaa 927952  T
Q  208 aaaaatggatgttgaat 224  Q
    |||| ||| ||||||||    
T  927953 aaaagtgggtgttgaat 927969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 38901832 - 38901715
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||        |||| || |||||| ||||||||    
T  38901832 gtggtggggtaaagtgttgaatgaaaaaccattggagagggtaaaagttgaacgagtgttgaataagagagagaaaatgatgtggagtgtttggaattga 38901733  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||| ||  |||||||||    
T  38901732 aaaagtgtgtgttgaatg 38901715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 108 - 226
Target Start/End: Original strand, 13151444 - 13151564
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaa-accattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||        | || || |||||||||||||    
T  13151444 gtggtggggtagagtgttgaatgaaaaaaccattggagagggtaaaagttgaatgagtgttgaattaagagaaaaaaaattatgtgcagtgttgggaatt 13151543  T
Q  206 gaaaaaatggatgttgaatgt 226  Q
    |||||| ||| ||||||||||    
T  13151544 gaaaaagtgggtgttgaatgt 13151564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 31174147 - 31174215
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    |||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  31174147 gtggcggggtagagtgttgaatgaaaaaccattggggatggtaaaagttgaatgagtgttgaataagag 31174215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 36855736 - 36855803
Alignment:
Q  109 tggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    ||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||    
T  36855736 tggtggggtagagtgttgaattaaaaatcattggagagggtaaaagttgaatgagtgttgaataagag 36855803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 43495678 - 43495741
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||    
T  43495678 gtggtggggtagagtgttgaatgaaaaatcattggagaggataaaagttgaatgagtgttgaat 43495741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 12855132 - 12855014
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaat-aagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||||| ||||||||||||||||| |||||        |||| || |||||||||||||    
T  12855132 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgagtgttgaatgaagagagagaaaatgatgtggagtgttgggaatt 12855034  T
Q  206 gaaaaaatggatgttgaatg 225  Q
    |||||| ||| |||||||||    
T  12855033 gaaaaagtgggtgttgaatg 12855014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 30822544 - 30822662
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaat-aagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||| ||||||||||||||||| |||||        |||| || |||||||||||||    
T  30822544 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgagtgttgaatgaagagagagaaaatgatgtggagtgttgggaatt 30822642  T
Q  206 gaaaaaatggatgttgaatg 225  Q
    |||||| ||| |||||||||    
T  30822643 gaaaaagtgggtgttgaatg 30822662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 227
Target Start/End: Original strand, 39433973 - 39434092
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    |||||||| ||||||||||||||||||| ||||||||| | ||||||||||||||||||| ||||| ||        |||| || | |||||| ||||||    
T  39433973 gtggtgggatagagtgttgaatgaaaaatcattggagaggataaaagttgaatgagtgtttaataaaagagaaaaaatgatgtggaatgttggaaattga 39434072  T
Q  208 aaaaatggatgttgaatgtg 227  Q
    |||| ||| |||||||||||    
T  39434073 aaaagtgggtgttgaatgtg 39434092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 5146672 - 5146737
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataa 173  Q
    |||||||||||| ||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||    
T  5146672 gtggtggggtagggtgttgaatgaaaaatcattgcagagggtaaaagttaaatgagtgttgaataa 5146737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 226
Target Start/End: Original strand, 14152027 - 14152147
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaa-accattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    ||||||||| ||||||||||||||||| ||||||| ||| ||||||||||||||| |||||||| ||| ||        |||| || |||||||||||||    
T  14152027 gtggtggggcagagtgttgaatgaaaaaaccattgaagatggtaaaagttgaatgggtgttgaattaaaagagagaaaatgatgtggagtgttgggaatt 14152126  T
Q  206 gaaaaaatggatgttgaatgt 226  Q
    |||||| ||| ||||||||||    
T  14152127 gaaaaagtgggtgttgaatgt 14152147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 39490255 - 39490140
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaattg 206  Q
    |||||| ||||||||||||||||||||| |||||||| || ||||| |||||||||||||||| ||||||        |||| || ||||||||||||||    
T  39490255 gtggtgaggtagagtgttgaatgaaaaatcattggag-agataaaaattgaatgagtgttgaattaagagagagagaatgatttggagtgttgggaattg 39490157  T
Q  207 aaaaaatggatgttgaa 223  Q
    ||||| ||| |||||||    
T  39490156 aaaaagtgggtgttgaa 39490140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 1073045 - 1073107
Alignment:
Q  109 tggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  1073045 tggtggggtagagtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgagtgttgaat 1073107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 4296732 - 4296850
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||| |||||||||||||||| ||||||        | || || |||||||||||||    
T  4296732 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgagtgttgaattaagagagagaaaataatgtggagtgttgggaatt 4296830  T
Q  206 gaaaaaatggatgttgaatg 225  Q
    |||||| ||| |||||||||    
T  4296831 gaaaaagtgggtgttgaatg 4296850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 24997193 - 24997075
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||| ||||| ||||||| |||||||| |||||||||||||||| ||||||        |||| || |||||||||||||    
T  24997193 gtggtggggtagggtgttgaatgaaaaaactattggag-aggtaaaaattgaatgagtgttgaattaagagagagaaaatgatgtggagtgttgggaatt 24997095  T
Q  206 gaaaaaatggatgttgaatg 225  Q
    |||||| ||| |||||||||    
T  24997094 gaaaaagtgggtgttgaatg 24997075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 22351575 - 22351691
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||| ||||||| |||||||| ||||||        |||| || |||||||||||||    
T  22351575 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgttgaattaagagagagaaaatgatgtggagtgttgggaatt 22351673  T
Q  206 gaaaaaatggatgttgaa 223  Q
    |||||| ||| |||||||    
T  22351674 gaaaaagtgggtgttgaa 22351691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 43021854 - 43021738
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaa-aaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||||| ||||||||||| |||||||| ||||||| |||||||| ||||||        |||| || |||||||||||||    
T  43021854 gtggtggggtagggtgttgaatgaaagaaccattggag-aggtaaaaattgaatgggtgttgaattaagagagagaaaatgatgtggagtgttgggaatt 43021756  T
Q  206 gaaaaaatggatgttgaa 223  Q
    |||||| ||| |||||||    
T  43021755 gaaaaagtgggtgttgaa 43021738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 6363067 - 6363003
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaacca-ttggagaaggtaaaagttgaatgagtgttgaat 171  Q
    ||||||||||| |||||||||||||||| || ||| ||| |||||||||||||||||||||||||    
T  6363067 gtggtggggtaaagtgttgaatgaaaaaacaattgtagagggtaaaagttgaatgagtgttgaat 6363003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 9117925 - 9117862
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    ||||||||||||| |||||||||| ||||||||||||| |||||||| |||||||||||||||||    
T  9117925 gtggtggggtagaatgttgaatgaaaaaaccattggag-aggtaaaaattgaatgagtgttgaat 9117862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 16218829 - 16218889
Alignment:
Q  111 gtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||||||||||||||||| | |||||| |||| || |||||||||||||||||    
T  16218829 gtggggtagagtgttgaatgaaaaactaatggagagggtacaaattgaatgagtgttgaat 16218889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 8852170 - 8852052
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||| ||||||||||||| || ||||| || ||||||||||||| ||||||        |||| || |||||||||||||    
T  8852170 gtggtggggtagggtgttgaatgaaaaaaccattggag-agataaaaattaaatgagtgttgaattaagagagagaaaatgatgtggagtgttgggaatt 8852072  T
Q  206 gaaaaaatggatgttgaatg 225  Q
    |||||| ||| |||||||||    
T  8852071 gaaaaagtgggtgttgaatg 8852052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 36209436 - 36209498
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    ||||||||||||||||||||||| |||||||| |||| || ||||| |||||||||||||||||    
T  36209436 gtggtggggtagagtgttgaatggaaaaccataggag-agataaaaattgaatgagtgttgaat 36209498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 7588463 - 7588526
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||| ||||||| |||||||||    
T  7588463 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgttgaat 7588526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 109 - 223
Target Start/End: Original strand, 17929217 - 17929332
Alignment:
Q  109 tggtggggtagagtgttgaatgaaaaa-ccattggagaaggtaaaagttgaatgagtgttgaataa-gagnnnnnnnntgatatgaagtgttgggaattg 206  Q
    ||||||| ||||||||||||||||||| |||||||||| | ||||| ||||||| ||||| ||| | |||        |||| || ||||||||||||||    
T  17929217 tggtgggatagagtgttgaatgaaaaaaccattggagatg-taaaaattgaatgggtgttaaattatgagagagaaaatgatgtggagtgttgggaattg 17929315  T
Q  207 aaaaaatggatgttgaa 223  Q
    |||||||||||||||||    
T  17929316 aaaaaatggatgttgaa 17929332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 160
Target Start/End: Original strand, 6333351 - 6333402
Alignment:
Q  109 tggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaat 160  Q
    |||| |||||||||||||||||||||| ||||||||| | ||||||||||||    
T  6333351 tggtagggtagagtgttgaatgaaaaatcattggagaggataaaagttgaat 6333402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 14383080 - 14382965
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||||| |||||   |||||||| ||||||        |||| || |||||| ||||||    
T  14383080 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaaaaggtgttgaattaagagagagaaaatgatgtggagtgttaggaatt 14382982  T
Q  206 gaaaaaatggatgttga 222  Q
    |||||| ||||||||||    
T  14382981 gaaaaagtggatgttga 14382965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 168
Target Start/End: Original strand, 1308658 - 1308718
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttg 168  Q
    |||||||||||| |||||||||| |||||||||||||||| |||||| || |||| ||||||    
T  1308658 gtggtggggtagggtgttgaatgaaaaaaccattggagaa-gtaaaaattaaatgtgtgttg 1308718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 44280105 - 44280042
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||| ||||||||||| ||||| ||||||| |||||||| ||||| | |||||||||    
T  44280105 gtggtggggtagggtgttgaatgaaaaaactattggag-aggtaaaaattgaaagggtgttgaat 44280042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 2e-33; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 109 - 225
Target Start/End: Original strand, 8176265 - 8176381
Alignment:
Q  109 tggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattgaa 208  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||        |||| || ||||||||||||||||    
T  8176265 tggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaataagagagagaaaatgatgtggagtgttgggaattgaa 8176364  T
Q  209 aaaatggatgttgaatg 225  Q
    ||| ||| |||||||||    
T  8176365 aaagtgggtgttgaatg 8176381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 108 - 224
Target Start/End: Original strand, 41152967 - 41153083
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||        |||| || ||||||| |||||||    
T  41152967 gtggtggggtagagtgttgaatgaaaaatcattgaagaaggtaaaagttgaatgagtgttgaataagagagagaaaatgatgtggagtgttgagaattga 41153066  T
Q  208 aaaaatggatgttgaat 224  Q
    |||||||||||||||||    
T  41153067 aaaaatggatgttgaat 41153083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 4577115 - 4577012
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||        |||| || |||||||||||||||    
T  4577115 gtggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaataagagagagaaaatgatgtggagtgttgggaattga 4577016  T
Q  208 aaaa 211  Q
    ||||    
T  4577015 aaaa 4577012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 219
Target Start/End: Complemental strand, 25652923 - 25652812
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||        |||| ||||||||||||||||||    
T  25652923 gtggtggggtagagtgttgaatgaaaaaccattggagagggtaaaaattcaatgagtgttgaataagagagagaaaatgatgtgaagtgttgggaattga 25652824  T
Q  208 aaaaatggatgt 219  Q
    |||| |||||||    
T  25652823 aaaagtggatgt 25652812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 112 - 222
Target Start/End: Complemental strand, 14278935 - 14278825
Alignment:
Q  112 tggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattgaaaaa 211  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||        |||| || |||||||||||||||||||    
T  14278935 tggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgaatgttgaataagagagagaaaatgatgtggagtgttgggaattgaaaaa 14278836  T
Q  212 atggatgttga 222  Q
    |||| ||||||    
T  14278835 atgggtgttga 14278825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 41263472 - 41263355
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||        |||| || || ||||||||||||    
T  41263472 gtggtggggtatagtgttgaatgaaaaaccattggagagggtaaaagttgaatgaatgttgaataagagagagaaaatgatgtggagcgttgggaattga 41263373  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||| |||||||||||||    
T  41263372 aaaagtggatgttgaatg 41263355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 10569771 - 10569874
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||        |||| || |||||||||||||||    
T  10569771 gtggtggggtagagtgttgaatgaaaaaccattggagagagtaaaagttgaatgagtgttgaataagagacaaaaaatgatgtggagtgttgggaattga 10569870  T
Q  208 aaaa 211  Q
    ||||    
T  10569871 aaaa 10569874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 27407705 - 27407773
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  27407705 gtggtcgggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaataagag 27407773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 37882392 - 37882505
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    ||||||||| ||||||||||||||||||| |||||| | ||||||||||||||||| ||||||||||||        |||| || |||||||||||||||    
T  37882392 gtggtggggaagagtgttgaatgaaaaactattggaaatggtaaaagttgaatgagcgttgaataagag--aaaaaatgatgtggagtgttgggaattga 37882489  T
Q  208 aaaaatggatgttgaa 223  Q
    |||||||| |||||||    
T  37882490 aaaaatgggtgttgaa 37882505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 115 - 226
Target Start/End: Original strand, 8681256 - 8681367
Alignment:
Q  115 ggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattgaaaaaatg 214  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||         ||||||| |||||||| |||||||||| |     
T  8681256 ggtagagtgttgaaagaaaaaccattggagagggtaaaagttgaatgaatgttgaataagaaagagaaaatgatatggagtgttggaaattgaaaaagtt 8681355  T
Q  215 gatgttgaatgt 226  Q
    ||||| ||||||    
T  8681356 gatgtcgaatgt 8681367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 11954887 - 11954819
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    ||||||||||||||||||||||||||||||||||  || | |||||||||||||| |||||||||||||    
T  11954887 gtggtggggtagagtgttgaatgaaaaaccattgacgaggataaaagttgaatgaatgttgaataagag 11954819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 15972677 - 15972609
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    ||||||||||||||||||||||||||||  |||| ||| |||||||||||||||| |||||||||||||    
T  15972677 gtggtggggtagagtgttgaatgaaaaattattgaagagggtaaaagttgaatgaatgttgaataagag 15972609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 25032462 - 25032395
Alignment:
Q  109 tggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    |||||||||||| ||||||||||||| |||||  ||| ||||||||||||||||||||||||||||||    
T  25032462 tggtggggtagaatgttgaatgaaaacccattaaagagggtaaaagttgaatgagtgttgaataagag 25032395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 31013804 - 31013922
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||| |||||||||||||||| ||||||        |||| || |||||||||||||    
T  31013804 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgagtgttgaattaagagagagaaaatgatgtggagtgttgggaatt 31013902  T
Q  206 gaaaaaatggatgttgaatg 225  Q
    |||||| ||| |||||||||    
T  31013903 gaaaaagtgggtgttgaatg 31013922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 175
Target Start/End: Original strand, 34918440 - 34918506
Alignment:
Q  109 tggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataaga 175  Q
    ||||||| |||| |||||||||||||| || |||||| |||||||||||||||||||||||||||||    
T  34918440 tggtgggttagattgttgaatgaaaaatcaatggagagggtaaaagttgaatgagtgttgaataaga 34918506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 30648073 - 30648136
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  30648073 gtggtggggtagagtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgagtgttgaat 30648136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 32976537 - 32976652
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaattg 206  Q
    |||||||||||| ||||||||| |||||||||||||| |||||||| ||||||| |||||||| ||||||        |||| || ||||||||||||||    
T  32976537 gtggtggggtagggtgttgaataaaaaaccattggag-aggtaaaaattgaatgggtgttgaattaagagagagaaaatgatgtggagtgttgggaattg 32976635  T
Q  207 aaaaaatggatgttgaa 223  Q
    ||||| ||| |||||||    
T  32976636 aaaaagtgggtgttgaa 32976652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 4938295 - 4938233
Alignment:
Q  110 ggtggggtagagtgttgaatgaaaaac-cattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    ||||||||||||||||||||||||||  ||||||||| |||||||||||||| ||||||||||    
T  4938295 ggtggggtagagtgttgaatgaaaaaatcattggagagggtaaaagttgaattagtgttgaat 4938233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 167
Target Start/End: Original strand, 27407002 - 27407061
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgtt 167  Q
    ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||    
T  27407002 gtggtggggtagagtgttgaatgaaaaaatcattggag-aggtaaaagttgaatgagtgtt 27407061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 42317998 - 42317883
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaattg 206  Q
    |||||||||||| |||||||||||||||| ||||||| |||||||| ||||| | |||||||| ||||||        ||||||| |||||||| |||||    
T  42317998 gtggtggggtagggtgttgaatgaaaaactattggag-aggtaaaaattgaaagggtgttgaattaagagagagaaaatgatatggagtgttggaaattg 42317900  T
Q  207 aaaaaatggatgttgaa 223  Q
    ||||| || ||||||||    
T  42317899 aaaaagtgaatgttgaa 42317883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 42608004 - 42608070
Alignment:
Q  108 gtggtggggtagagt-gttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataa 173  Q
    ||||||| ||||||| |||||||||||||| |||||| | |||||||||||||| ||||||||||||    
T  42608004 gtggtggtgtagagttgttgaatgaaaaactattggaaagggtaaaagttgaataagtgttgaataa 42608070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 23089629 - 23089513
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||||| ||||||| |||||||| || |||        |||| ||||||||||||||||    
T  23089629 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgttgaattatgagagagaaaatgatgtgaagtgttgggaatt 23089531  T
Q  206 gaaaaaatggatgttgaa 223  Q
     ||||| ||| |||||||    
T  23089530 aaaaaagtgggtgttgaa 23089513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 27942602 - 27942486
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||||| ||||||| |||||||| ||||||        |||| || ||||||||| |||    
T  27942602 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgttgaattaagagagagaaaatgatgtggagtgttggggatt 27942504  T
Q  206 gaaaaaatggatgttgaa 223  Q
    |||||| ||| |||||||    
T  27942503 gaaaaagtgggtgttgaa 27942486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 29618974 - 29619090
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||| ||||||| |||||||| || |||        |||| || |||||||||||||    
T  29618974 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgttgaattatgagaaagaaaatgatgtggagtgttgggaatt 29619072  T
Q  206 gaaaaaatggatgttgaa 223  Q
    |||||| ||| |||||||    
T  29619073 gaaaaagtgggtgttgaa 29619090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 34529343 - 34529408
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataa 173  Q
    ||||||||| ||| |||||||||||||||||||||||| | |||||||| ||||| |||| |||||    
T  34529343 gtggtggggaagaatgttgaatgaaaaaccattggagaggataaaagttaaatgaatgttaaataa 34529408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 40889005 - 40888889
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||| ||||| ||||||| |||||||| ||||||| |||||||| ||||||        |||| || |||||||||||||    
T  40889005 gtggtggggtagggtgttgaatgaaaaaactattggag-aggtaaaaattgaatgggtgttgaattaagagagagaaaatgatgtggagtgttgggaatt 40888907  T
Q  206 gaaaaaatggatgttgaa 223  Q
    |||||| ||| |||||||    
T  40888906 gaaaaagtgggtgttgaa 40888889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 4219405 - 4219468
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    ||||| ||||||||||||||||| |||||||||||||| |||||||| ||||||| |||||||||    
T  4219405 gtggtagggtagagtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgttgaat 4219468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 3454846 - 3454731
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||| |||| |||||||||  |||||| |||||||||||||||| || |||        |||| || ||||||| |||||    
T  3454846 gtggtggggtagggtgttgaatgaaaaaatcattggaga--gtaaaaattgaatgagtgttgaattatgagagagaaaatgatgtggagtgttgagaatt 3454749  T
Q  206 gaaaaaatggatgttgaa 223  Q
    |||||| |||||||||||    
T  3454748 gaaaaagtggatgttgaa 3454731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 223
Target Start/End: Complemental strand, 19241424 - 19241311
Alignment:
Q  111 gtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaattgaa 208  Q
    ||||||||| ||||||||||| ||||||||||||| |||||||| ||||||| |||||||| ||||||        |||| || ||||||| ||||||||    
T  19241424 gtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgttgaattaagagagagaaaatgatgtggagtgttgagaattgaa 19241326  T
Q  209 aaaatggatgttgaa 223  Q
    ||| ||| |||||||    
T  19241325 aaagtgggtgttgaa 19241311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 25670866 - 25670982
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaa-accattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||| ||| |||||||||||||| |||||||||| || ||||| |||||||||||||||| || |||        |||| || |||||||||||||    
T  25670866 gtggtgggatagggtgttgaatgaaaacaccattggag-agttaaaaattgaatgagtgttgaattatgagagagaaaatgatgtggagtgttgggaatt 25670964  T
Q  206 gaaaaaatggatgttgaa 223  Q
    |||||| ||| |||||||    
T  25670965 gaaaaagtgggtgttgaa 25670982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 13479784 - 13479847
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||| |||||||||| |||||| ||||||| | |||||| |||||||||||||||||    
T  13479784 gtggtggggtagggtgttgaatgaaaaaactattggag-atgtaaaaattgaatgagtgttgaat 13479847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 36572380 - 36572443
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||||||||| |||| ||||||||||||||||  ||||| ||||||| |||||||||    
T  36572380 gtggtggggtagagtgttaaatgaaaaaaccattggagaa-ataaaaattgaatgggtgttgaat 36572443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 213
Target Start/End: Complemental strand, 7651114 - 7651008
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||| |||||||||||||  ||||||| || |||| |||||||| ||||||        |||| || |||||||||||||    
T  7651114 gtggtggggtagggtgttgaatgaaaaaaccattggag-gggtaaaaattaaatgggtgttgaattaagagagagaaaatgatgtggagtgttgggaatt 7651016  T
Q  206 gaaaaaat 213  Q
    ||||||||    
T  7651015 gaaaaaat 7651008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 31008345 - 31008458
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    ||||||||||||  ||||||||| ||||||||||||| ||||||||| ||||||| ||||| || ||||||        |||| |||||||||| |||||    
T  31008345 gtggtggggtaggatgttgaatgaaaaaaccattgga-aaggtaaaaattgaatgggtgttaaattaagagagagaaaatgatgtgaagtgttgagaatt 31008443  T
Q  206 gaaaaaatggatgtt 220  Q
    |||||| ||| ||||    
T  31008444 gaaaaagtgggtgtt 31008458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 12912957 - 12912912
Alignment:
Q  131 aaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    ||||| |||| |||| ||||||||||||||||||||| ||||||||    
T  12912957 aaaaatcattagagagggtaaaagttgaatgagtgttaaataagag 12912912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 42806960 - 42807023
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||| |||||||||| |||||||||| ||| | |||||| ||||||| |||||||||    
T  42806960 gtggtggggtagggtgttgaatgaaaaaaccattagag-atgtaaaaattgaatgggtgttgaat 42807023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 2e-33; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 109 - 225
Target Start/End: Original strand, 44929252 - 44929368
Alignment:
Q  109 tggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattgaa 208  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||        |||| |||| ||||| ||||||||    
T  44929252 tggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaataaaagagagaaaatgatttgaaatgttgagaattgaa 44929351  T
Q  209 aaaatggatgttgaatg 225  Q
    |||||||||||||||||    
T  44929352 aaaatggatgttgaatg 44929368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 44651181 - 44651065
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||        |||| || |||||||||||||||    
T  44651181 gtggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaataagagagagaaaatgatgtggagtgttgggaattga 44651082  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||| ||| |||||||||    
T  44651081 aaaagtgg-tgttgaatg 44651065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 44451231 - 44451334
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||        |||| || |||||||||||||||    
T  44451231 gtggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaataagagagagaaaatgatgtggagtgttgggaattga 44451330  T
Q  208 aaaa 211  Q
    ||||    
T  44451331 aaaa 44451334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 8464207 - 8464090
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||        |||| || ||||||| |||||||    
T  8464207 gtggtggggtagagtgttgaatgaaaaaccattggagagagtaaaaattgaatgagtgttgaataagagagagaaaatgatgtggagtgttgagaattga 8464108  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||| |||||||||||||    
T  8464107 aaaagtggatgttgaatg 8464090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 225
Target Start/End: Complemental strand, 17783484 - 17783368
Alignment:
Q  109 tggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattgaa 208  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||        |||| || | ||||||||||| ||    
T  17783484 tggtggggtagagtgttgaatgaaaaaccattggagagagtaaaagttgaatgagtgttgaataagagagagaaaatgatgtggaatgttgggaattaaa 17783385  T
Q  209 aaaatggatgttgaatg 225  Q
    ||| |||||||||||||    
T  17783384 aaagtggatgttgaatg 17783368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 41542436 - 41542321
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||  ||||||||||||        |||| || |||||||||||||||    
T  41542436 gtggtggggtagagtgttgaatgaaaaaccattggagaggataaaagttgaatga--gttgaataagagagagaatatgatgtggagtgttgggaattga 41542339  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||| |||||||||||||    
T  41542338 aaaagtggatgttgaatg 41542321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 643783 - 643899
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    ||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||        |||  || |||||||||||||||    
T  643783 gtggtggggtagagtgttgaatgaaaaaccatttgagagggtaaatgttgaatgagtgttgaataagagagagaaaatgacgtggagtgttgggaattga 643882  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||| ||| |||||||||    
T  643883 aaaagtgg-tgttgaatg 643899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 52933733 - 52933797
Alignment:
Q  112 tggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  52933733 tggggtagagtgttgaatgaaaaaccattggagagtgtaaaagttgaatgagtgttgaataagag 52933797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 52941368 - 52941432
Alignment:
Q  112 tggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  52941368 tggggtagagtgttgaatgaaaaaccattggagagtgtaaaagttgaatgagtgttgaataagag 52941432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 114 - 225
Target Start/End: Complemental strand, 44334391 - 44334280
Alignment:
Q  114 gggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattgaaaaaat 213  Q
    ||||| |||| |||||||||||||||||||||  |||||||||||||||||||||||||||||        |||| || ||||||| ||||||||||| |    
T  44334391 gggtaaagtgatgaatgaaaaaccattggagagagtaaaagttgaatgagtgttgaataagagagagaaaatgatgtggagtgttgagaattgaaaaagt 44334292  T
Q  214 ggatgttgaatg 225  Q
    ||||||||||||    
T  44334291 ggatgttgaatg 44334280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 223
Target Start/End: Complemental strand, 48729419 - 48729315
Alignment:
Q  119 gagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattgaaaaaatggatg 218  Q
    ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||         |||| |||||||||   |||||||||||||||||    
T  48729419 gagtgttgaatgaaaaaccattggagagggtaaaagttgaatgtgtgttgaataagaaagagaaaatgatgtgaagtgttaaaaattgaaaaaatggatg 48729320  T
Q  219 ttgaa 223  Q
    |||||    
T  48729319 ttgaa 48729315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 20584812 - 20584915
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    |||||||||||||||||||||||||||| | ||||||||| |||||||||||| |||||| ||||||||        |||| || |||||||||||||||    
T  20584812 gtggtggggtagagtgttgaatgaaaaatctttggagaagataaaagttgaataagtgttaaataagagtgagaaaatgatgtggagtgttgggaattga 20584911  T
Q  208 aaaa 211  Q
    ||||    
T  20584912 aaaa 20584915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 40500507 - 40500439
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    |||||||| || ||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||    
T  40500507 gtggtgggataaagtgttgaatgaaaaaccactggagagggtaaaagttaaatgagtgttgaataagag 40500439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 175
Target Start/End: Complemental strand, 36303090 - 36303023
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataaga 175  Q
    ||||| |||| ||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||    
T  36303090 gtggtagggtggagtgttgaatgaaaaaccattggagagggtaaaagttgaatatgtgttgaataaga 36303023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 45239247 - 45239129
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaa-ccattggagaaggtaaaagttgaatgagtgttgaat-aagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||||||| |||||||||| ||||||| ||||||||||||||||| |||||        |||| || |||||||||||||    
T  45239247 gtggtggggtagggtgttgaatgaaaaaaccattggaga-ggtaaaaattgaatgagtgttgaataaagagagagaaaatgatgtggagtgttgggaatt 45239149  T
Q  206 gaaaaaatggatgttgaatg 225  Q
    |||||| ||| |||||||||    
T  45239148 gaaaaagtgggtgttgaatg 45239129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 45456111 - 45456174
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaa-ccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||    
T  45456111 gtggtggggtagagtgttgaatgaaaaatccattggag-aggtaaaaattgaatgagtgttgaat 45456174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 27630420 - 27630538
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| |||||||||| |||||||||||||| | |||||| |||||||||||||||| ||||||        |||| || |||||||||||||    
T  27630420 gtggtggggtagggtgttgaatgaaaaaaccattggag-atgtaaaaattgaatgagtgttgaattaagagagataaaatgatgtggagtgttgggaatt 27630518  T
Q  206 gaaaaaatggatgttgaatg 225  Q
    |||||| ||| |||||||||    
T  27630519 gaaaaagtgggtgttgaatg 27630538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 37420304 - 37420422
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| |||||||||| |||||||||||||| | |||||| |||||||||||||||| ||||||        |||| || |||||||||||||    
T  37420304 gtggtggggtagggtgttgaatgaaaaaaccattggag-atgtaaaaattgaatgagtgttgaattaagagagataaaatgatgtggagtgttgggaatt 37420402  T
Q  206 gaaaaaatggatgttgaatg 225  Q
    |||||| ||| |||||||||    
T  37420403 gaaaaagtgggtgttgaatg 37420422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 211
Target Start/End: Complemental strand, 36230462 - 36230362
Alignment:
Q  112 tggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaattgaaa 209  Q
    |||||||||||||||||||| ||||||||||||| |||||||| ||||||| |||||||| ||||||        |||| ||||||||||||||||||||    
T  36230462 tggggtagagtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgttgaattaagagagataaaatgatgtgaagtgttgggaattgaaa 36230364  T
Q  210 aa 211  Q
    ||    
T  36230363 aa 36230362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 48388068 - 48388184
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||| ||||||| |||||||| ||||||        |||| || |||||||||||||    
T  48388068 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgttgaattaagagagagaaaatgatgtggagtgttgggaatt 48388166  T
Q  206 gaaaaaatggatgttgaa 223  Q
    |||||| ||| |||||||    
T  48388167 gaaaaagtgggtgttgaa 48388184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 2478289 - 2478404
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaattg 206  Q
    |||||||||||| ||||||||| |||||||||||||| |||||||| ||||| | |||||||| ||||||        |||| || ||||||||||||||    
T  2478289 gtggtggggtagggtgttgaataaaaaaccattggag-aggtaaaaattgaaagggtgttgaattaagagagagaaaatgatgtggagtgttgggaattg 2478387  T
Q  207 aaaaaatggatgttgaa 223  Q
    ||||| ||| |||||||    
T  2478388 aaaaagtgggtgttgaa 2478404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 31159496 - 31159381
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||||| ||||||| |||||||| ||||||        |||| || |||||||||||||    
T  31159496 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgttgaattaagagagagaaaatgatgtggagtgttgggaatt 31159398  T
Q  206 gaaaaaatggatgttga 222  Q
    |||||| | ||||||||    
T  31159397 gaaaaagtagatgttga 31159381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 222
Target Start/End: Complemental strand, 29919479 - 29919364
Alignment:
Q  109 tggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaattg 206  Q
    ||||||||||||||||||||||| |||||||||||||| |  |||| ||||||  |||||||| ||||||        ||||||| ||||||||||||||    
T  29919479 tggtggggtagagtgttgaatgaaaaaaccattggagaggtaaaaaattgaataggtgttgaattaagagagagaaaatgatatggagtgttgggaattg 29919380  T
Q  207 aaaaaatggatgttga 222  Q
    ||||| | ||||||||    
T  29919379 aaaaagtagatgttga 29919364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 31468242 - 31468124
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||| ||||| ||||||| |||||||| |||||||| ||||||| ||||||        |||| || |||||||||||||    
T  31468242 gtggtggggtagggtgttgaatgaaaaaactattggag-aggtaaaaattgaatgaatgttgaattaagagagagaaaatgatgtggagtgttgggaatt 31468144  T
Q  206 gaaaaaatggatgttgaatg 225  Q
    |||||| ||| |||||||||    
T  31468143 gaaaaagtgggtgttgaatg 31468124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 3754984 - 3755106
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaa-----ccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttggga 202  Q
    ||||||||||||||||||||||||||||     | |||||||| |||||||||||| ||| |||||||||||||        |||| |  ||||||| ||    
T  3754984 gtggtggggtagagtgttgaatgaaaaaaaaaactattggagagggtaaaagttgattgaatgttgaataagagagagaaaatgatgtagagtgttgaga 3755083  T
Q  203 attgaaaaaatggatgttgaatg 225  Q
    ||||||||| |||||| ||||||    
T  3755084 attgaaaaagtggatgctgaatg 3755106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 48404439 - 48404335
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||| |||| |||||||| |||||||| |||||||||||||||| ||||||        |||| || |||||||||||||    
T  48404439 gtggtggggtagggtgttgaatgaaaaaatcattggag-aggtaaaaattgaatgagtgttgaattaagagagagaaaatgatgtggagtgttgggaatt 48404341  T
Q  206 gaaaaa 211  Q
    ||||||    
T  48404340 gaaaaa 48404335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 37822679 - 37822616
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    ||||||||||||||||||||| | ||||| |||||||| |||||||| |||||||||||||||||    
T  37822679 gtggtggggtagagtgttgaaagaaaaaatcattggag-aggtaaaaattgaatgagtgttgaat 37822616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 51494432 - 51494495
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||| |||||||| ||||||||    
T  51494432 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgaatgttgaat 51494495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 8468433 - 8468318
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaa-accattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    ||||||||||||||||||||||||||| | |||  ||| ||||||||||| |||| |||||||| ||||||        |||| || |||||||||||||    
T  8468433 gtggtggggtagagtgttgaatgaaaatatcatcagag-aggtaaaagttaaatgtgtgttgaattaagagagagaaaatgatgtggagtgttgggaatt 8468335  T
Q  206 gaaaaaatggatgttga 222  Q
    |||||| ||| ||||||    
T  8468334 gaaaaagtgggtgttga 8468318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 33164521 - 33164458
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||| ||||||||||| |||| |||||||| | |||||| |||||||||||||||||    
T  33164521 gtggtggggtagggtgttgaatgaaaaaatcattggag-atgtaaaaattgaatgagtgttgaat 33164458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 37646520 - 37646583
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||| |||||||||| ||||| |||||||| |||||||| ||||||| |||||||||    
T  37646520 gtggtggggtagggtgttgaatgaaaaaatcattggag-aggtaaaaattgaatgggtgttgaat 37646583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 14096800 - 14096696
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaacc-attggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||| ||| |||||||||||||||   |||||||| ||||||| |||||||||||||||| ||||||        |||| || |||||||||||||    
T  14096800 gtggtgggatagggtgttgaatgaaaaaattattggaga-ggtaaaaattgaatgagtgttgaattaagagagataaaatgatttggagtgttgggaatt 14096702  T
Q  206 gaaaaa 211  Q
    ||||||    
T  14096701 gaaaaa 14096696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 23092878 - 23092815
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||| ||||||||||| |||| |||||||| ||||||||  |||||| |||||||||    
T  23092878 gtggtggggtagggtgttgaatgaaaaaatcattggag-aggtaaaaactgaatgggtgttgaat 23092815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 37691250 - 37691313
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    ||||||| |||| |||||||||| |||||||||||||| |||||||| |||||||  ||||||||    
T  37691250 gtggtggagtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatggatgttgaat 37691313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 167
Target Start/End: Original strand, 51156848 - 51156906
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgtt 167  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||| ||||||| |||||    
T  51156848 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaa-ttgaatgggtgtt 51156906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 51520303 - 51520267
Alignment:
Q  131 aaaaaccattggagaaggtaaaagttgaatgagtgtt 167  Q
    ||||||||||||||| |||||||||||||| ||||||    
T  51520303 aaaaaccattggagagggtaaaagttgaataagtgtt 51520267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 18029460 - 18029577
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||        |||| || |||||||||||||||    
T  18029460 gtggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaataagagagagaaaatgatgtggagtgttgggaattga 18029559  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||| ||| ||| |||||    
T  18029560 aaaagtgggtgtcgaatg 18029577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 36912527 - 36912410
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||        |||| |  |||||||||||||||    
T  36912527 gtggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaataagagagagaaaatgatgtagagtgttgggaattga 36912428  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||| ||| |||||||||    
T  36912427 aaaagtgggtgttgaatg 36912410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 41477293 - 41477176
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||        |||  || |||||||||||||||    
T  41477293 gtggaggggtagagtgttgaatgaaaaaccattggagatggtaaaagttgaatgagtgttgaataagagagagaaaatgacgtggagtgttgggaattga 41477194  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||| |||||||||||||    
T  41477193 aaaagtggatgttgaatg 41477176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 17741822 - 17741705
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||        |||| || ||| |||||||||||    
T  17741822 gtggtggggtagagtgttgaatgaaaaatcattggagagggtaaaagttgaatgagtattgaataagagagagaaaatgatgtggagtcttgggaattga 17741723  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||| |||||||||||||    
T  17741722 aaaagtggatgttgaatg 17741705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 34955627 - 34955743
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||        |||| || |||||||||||||||    
T  34955627 gtggtggggtagaatgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaataagagagagaaaatgatgtggagtgttgggaattga 34955726  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||| ||| |||||||||    
T  34955727 aaaagtgg-tgttgaatg 34955743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 113 - 225
Target Start/End: Original strand, 8609947 - 8610059
Alignment:
Q  113 ggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattgaaaaaa 212  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||        ||||||| |||||||||||||||||||     
T  8609947 ggggtaaagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaataaaagagagaaaatgatatggagtgttgggaattgaaaaag 8610046  T
Q  213 tggatgttgaatg 225  Q
    || ||||||||||    
T  8610047 tgaatgttgaatg 8610059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 225
Target Start/End: Original strand, 30470780 - 30470896
Alignment:
Q  109 tggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattgaa 208  Q
    ||||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||        |||  || ||||||||||||||||    
T  30470780 tggtggggtagagtgttgaatgaaaaaccattgaagagagtaaaagttgaatgagtgttgaataagagagagaaaatgacgtggagtgttgggaattgaa 30470879  T
Q  209 aaaatggatgttgaatg 225  Q
    ||||||||| |||||||    
T  30470880 aaaatggatcttgaatg 30470896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 5212401 - 5212285
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||        |||| || ||||||||||||| |    
T  5212401 gtggtggggtagagtgttgaatgaaaaatcattggagagggtaaaagttgaatgagtgttgaataagagagagaaaatgatgtggagtgttgggaattaa 5212302  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||| ||| |||||||||    
T  5212301 aaaagtgg-tgttgaatg 5212285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 7990541 - 7990473
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7990541 gtggtggggtaaagtgttgaatgaaaaaccattggagagggtaaaagttgaatgagtgttgaataagag 7990473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 4625455 - 4625572
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    ||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||        | || || |||||||||||||||    
T  4625455 gtggtggggtatagtgttgaatgaaaaaccattggagatgataaaagttgaatgagtgttgaataagagagagaaaataatttggagtgttgggaattga 4625554  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||| ||  |||||||||    
T  4625555 aaaagtgagtgttgaatg 4625572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 5735397 - 5735329
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  5735397 gtggtggggtagggtgttgaatgaaaaaccattggagagggtaaaaattgaatgagtgttgaataagag 5735329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 114 - 225
Target Start/End: Original strand, 26632120 - 26632231
Alignment:
Q  114 gggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattgaaaaaat 213  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||        |||  ||  |||||||||||||||||| |    
T  26632120 gggtagagtgttgaatgaaaaaccattggagagagtaaaagttgaatgagtgttgaataagagagagaaaatgacgtggcgtgttgggaattgaaaaagt 26632219  T
Q  214 ggatgttgaatg 225  Q
    || |||||||||    
T  26632220 gggtgttgaatg 26632231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 225
Target Start/End: Original strand, 26749373 - 26749486
Alignment:
Q  112 tggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattgaaaaa 211  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||||||||| |||||||||| ||        ||||||| ||||||| ||||| |||||    
T  26749373 tggggtagaatgttgaatgaaaaaccattgaagagggtaaaagttgaatgaatgttgaataaaagggagaaaatgatatggagtgttgagaattaaaaaa 26749472  T
Q  212 atggatgttgaatg 225  Q
    |||| |||||||||    
T  26749473 atgggtgttgaatg 26749486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 38584855 - 38584972
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    ||||||||||| |||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||        |||  || |||||||||||||||    
T  38584855 gtggtggggtaaagtgttgaatgaaaaaccattggagtgggtaaaagttgaacgagtgttgaataagagagagaaaatgacgtggagtgttgggaattga 38584954  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||| ||  |||||||||    
T  38584955 aaaagtgtgtgttgaatg 38584972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 42860824 - 42860708
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    |||||||||| ||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||         |||| || |||||||||||||||    
T  42860824 gtggtggggtggagtgttgaatgaaaaaccattggagaggttaaatgttgaatgagtgttgaataagaaagagaaaatgatgtggagtgttgggaattga 42860725  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||| ||| |||||||||    
T  42860724 aaaagtgg-tgttgaatg 42860708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 13815057 - 13814989
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    ||||||||||||| |||||||||||||||||||||||| |||||| ||||||| |||||||||||||||    
T  13815057 gtggtggggtagaatgttgaatgaaaaaccattggagagggtaaatgttgaattagtgttgaataagag 13814989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 220
Target Start/End: Original strand, 29637116 - 29637228
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    ||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||| |||||||         | || || |||||||| ||||||    
T  29637116 gtggtggggtagagtgttgaatgaaaaactattgaagagggtaaaagttgaatgagtgttaaataagaaagagaaaattatgtggagtgttggaaattga 29637215  T
Q  208 aaaaatggatgtt 220  Q
    |||||||||||||    
T  29637216 aaaaatggatgtt 29637228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 39811023 - 39811087
Alignment:
Q  112 tggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    ||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  39811023 tggggtaaagtgttgaatgaaaaactattggagagggtaaaagttgaatgagtgttgaataagag 39811087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 17494515 - 17494578
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||||    
T  17494515 gtggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttcaatgattgttgaat 17494578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 30289692 - 30289759
Alignment:
Q  109 tggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||| || |||||||||||    
T  30289692 tggtggggtagagtgttgaatgaaaaacaattggagagggtaaaagttgaatgtgtattgaataagag 30289759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 43524351 - 43524467
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| |||||||||| ||||| |||||||| |||||||| |||||||||||||||| || |||        |||| || |||||||||||||    
T  43524351 gtggtggggtagggtgttgaatgaaaaaatcattggag-aggtaaaaattgaatgagtgttgaattatgagagagaaaatgatgtggagtgttgggaatt 43524449  T
Q  206 gaaaaaatggatgttgaa 223  Q
    |||||| |||||||||||    
T  43524450 gaaaaagtggatgttgaa 43524467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 24431827 - 24431894
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    ||||||| ||| |||||||||||||||| ||||||||| |||||||||||||| ||| |||||||||||    
T  24431827 gtggtggagtaaagtgttgaatgaaaaatcattggagagggtaaaagttgaat-agtattgaataagag 24431894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 31129462 - 31129526
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    ||||||||||||||||||||||| ||||| |||| |||| |||||||||||||||||||| ||||    
T  31129462 gtggtggggtagagtgttgaatgaaaaaatcattagagatggtaaaagttgaatgagtgtcgaat 31129526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 35931972 - 35931857
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaattg 206  Q
    |||||||||||| |||||||||||||||| ||||||| |||||||| ||||| | |||||||| ||||||        |||| || |||||||| |||||    
T  35931972 gtggtggggtagggtgttgaatgaaaaactattggag-aggtaaaaattgaaagggtgttgaattaagagagagaaaatgatgtggagtgttggaaattg 35931874  T
Q  207 aaaaaatggatgttgaa 223  Q
    ||||| |||||||||||    
T  35931873 aaaaagtggatgttgaa 35931857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 113 - 223
Target Start/End: Original strand, 1958146 - 1958256
Alignment:
Q  113 ggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaattgaaaaa 211  Q
    ||||||| ||||||||| |||||||||||||| |||||||| ||||||| |||||||| ||||||        |||| || |||||||||||||||||||    
T  1958146 ggggtagggtgttgaataaaaaaccattggag-aggtaaaaattgaatgggtgttgaattaagagagagaaaatgatgtggagtgttgggaattgaaaaa 1958244  T
Q  212 atggatgttgaa 223  Q
     ||| |||||||    
T  1958245 gtgggtgttgaa 1958256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 171
Target Start/End: Original strand, 12272443 - 12272505
Alignment:
Q  109 tggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||| ||||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  12272443 tggtggggtagaatgttgaatgaaaaaaccattggag-aggtaaaaattgaatgagtgttgaat 12272505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 35099546 - 35099428
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||| |||| |||||||| |||||||| |||||||||||||||| ||||||        |||| |  |||||||||||||    
T  35099546 gtggtggggtagggtgttgaatgaaaaaatcattggag-aggtaaaaattgaatgagtgttgaattaagagagagaaaatgatgtagagtgttgggaatt 35099448  T
Q  206 gaaaaaatggatgttgaatg 225  Q
    |||||| ||| |||||||||    
T  35099447 gaaaaagtgggtgttgaatg 35099428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 222
Target Start/End: Original strand, 45100986 - 45101100
Alignment:
Q  109 tggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaattg 206  Q
    ||||||||||| |||||||||| |||||||||||||| |||||||| ||||||| |||||||| ||||||        |||| || ||||||||||||||    
T  45100986 tggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgttgaattaagagagagaaaatgatgtggagtgttgggaattg 45101084  T
Q  207 aaaaaatggatgttga 222  Q
    ||||| ||| ||||||    
T  45101085 aaaaagtgggtgttga 45101100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 40283586 - 40283470
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||| ||||| ||||||| |||||||| ||||||| |||||||| || |||        |||| || |||||||||||||    
T  40283586 gtggtggggtagggtgttgaatgaaaaaactattggag-aggtaaaaattgaatgggtgttgaattatgagagagaaaatgatgtggagtgttgggaatt 40283488  T
Q  206 gaaaaaatggatgttgaa 223  Q
    |||||| |||||||||||    
T  40283487 gaaaaagtggatgttgaa 40283470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 42860036 - 42859932
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||| ||||||||||||| | |||||| |||||||||||||||| ||||||        |||| || |||||||||||||    
T  42860036 gtggtggggtagggtgttgaatgaaaaaaccattggag-atgtaaaaattgaatgagtgttgaattaagagagagaaaatgatgtggagtgttgggaatt 42859938  T
Q  206 gaaaaa 211  Q
    ||||||    
T  42859937 gaaaaa 42859932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 23549824 - 23549761
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||||| ||||||| |||||||||    
T  23549824 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgttgaat 23549761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 43618309 - 43618427
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||| |||||||  ||||||| ||||||        |||| || |||||||||||||    
T  43618309 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatggatgttgaattaagagagagaaaatgatgtggagtgttgggaatt 43618407  T
Q  206 gaaaaaatggatgttgaatg 225  Q
    || ||| ||| |||||||||    
T  43618408 gataaagtgggtgttgaatg 43618427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 43525055 - 43525112
Alignment:
Q  114 gggtagagtgttgaatgaaaaa-ccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||| ||||||||||||||| |||||||||| ||||||| |||||||||||||||||    
T  43525055 gggtagggtgttgaatgaaaaaaccattggaga-ggtaaaaattgaatgagtgttgaat 43525112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 171
Target Start/End: Complemental strand, 13947474 - 13947414
Alignment:
Q  111 gtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    ||||||||| ||||||||||| ||||||||||||| |||||||| ||||||| |||||||||    
T  13947474 gtggggtagtgtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgttgaat 13947414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 15053743 - 15053680
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||| ||||||||||| |||||||||||||  ||||||| ||||||| |||||||||    
T  15053743 gtggtggggtagggtgttgaatgaaaaaaccattggag-tggtaaaaattgaatgggtgttgaat 15053680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 44149981 - 44149918
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||||| ||||||| || ||||||    
T  44149981 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtattgaat 44149918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 30532411 - 30532475
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggta-aaagttgaatgagtgttgaataa 173  Q
    |||||||||||| ||||||||||||||| |||||| ||  ||| |||||||||||| ||||||||||    
T  30532411 gtggtggggtagggtgttgaatgaaaaatcattggtga--gtataaagttgaatgaatgttgaataa 30532475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 26244608 - 26244492
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||| ||| ||||||||||| ||||| ||||||| |||||||| ||||||| |||||||| || |||        |||| || |||||||||||||    
T  26244608 gtggtgggatagggtgttgaatgaaaaaactattggag-aggtaaaaattgaatgtgtgttgaattatgagagagaaaatgatgtggagtgttgggaatt 26244510  T
Q  206 gaaaaaatggatgttgaa 223  Q
    |||||| || ||||||||    
T  26244509 gaaaaagtgaatgttgaa 26244492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 29731805 - 29731742
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||| ||||||||||| ||||| ||||||| || ||||| ||||||| |||||||||    
T  29731805 gtggtggggtagggtgttgaatgaaaaaactattggag-agttaaaaattgaatgggtgttgaat 29731742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 53184057 - 53184173
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||        |||| ||||||||||||||||||    
T  53184057 gtggtggggtagagtgttgaatgaaaaaccattggagagggttaaagttgaatgagtgttgaataagagagagaaaatgatgtgaagtgttgggaattga 53184156  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||| ||| |||||||||    
T  53184157 aaaagtgg-tgttgaatg 53184173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 31848735 - 31848851
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||        |||| || |||||||| ||||||    
T  31848735 gtggtggggtagagtgttgaatgaaaaaccattggagagggtaaatgttgaatgagtgttgaataagagagagaaaatgatgtggagtgttggaaattga 31848834  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||||||| |||||||||    
T  31848835 aaaaatgg-tgttgaatg 31848851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 10089957 - 10089890
Alignment:
Q  109 tggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||    
T  10089957 tggtggggtagagtgttgaatgaaaaatcattggagagggtaaaagttgaatgagtgttgaataagag 10089890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 54356857 - 54356972
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    |||||| |||||||||||||||||||||||||| ||||  |||||||||||||| ||||||||||||||        |||| || |||||||||||||||    
T  54356857 gtggtgaggtagagtgttgaatgaaaaaccattagagagagtaaaagttgaatgtgtgttgaataagagaaagaaaatgatgtggagtgttgggaattga 54356956  T
Q  208 aaaaatggatgttgaa 223  Q
    |||| |||||||||||    
T  54356957 aaaagtggatgttgaa 54356972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 39049044 - 39049111
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataaga 175  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||    
T  39049044 gtggtggggtagagtgttgaatgaaaaaccatcggagagggtaaaagttgaatgaatgttgaataaga 39049111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 39113716 - 39113819
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    |||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||        |||| || |||||||||||||||    
T  39113716 gtggtggggtagagtgttgaatgaaaaaccattgaaaatggtaaaagttgaatgagtgttgaataaaagagagaaaatgatgtggagtgttgggaattga 39113815  T
Q  208 aaaa 211  Q
    ||||    
T  39113816 aaaa 39113819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 114 - 225
Target Start/End: Original strand, 47750192 - 47750302
Alignment:
Q  114 gggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattgaaaaaat 213  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||        |||  || |||| |||||||||||||| |    
T  47750192 gggtagagtgttgaatgaaaaatcattggagagggtaaaagttgaatgagtgttgaataagagagagaaaatgacgtggagtg-tgggaattgaaaaagt 47750290  T
Q  214 ggatgttgaatg 225  Q
    ||||||||||||    
T  47750291 ggatgttgaatg 47750302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 223
Target Start/End: Complemental strand, 12158248 - 12158134
Alignment:
Q  109 tggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattgaa 208  Q
    ||||| ||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||        |||| || |||||||||||| |||    
T  12158248 tggtgaggtagagtgttgaatgaaaaaccattgaaaaagataaaagttgaatgagtgttgaataagagagagaaaatgatgtggagtgttgggaatcgaa 12158149  T
Q  209 aaaatggatgttgaa 223  Q
    ||  |||||||||||    
T  12158148 aatgtggatgttgaa 12158134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 33526828 - 33526711
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    ||||||||||| ||||||||||||||||  |||||||| |||||||||||||||||| |||||||| ||        ||||| | ||||||| |||||||    
T  33526828 gtggtggggtaaagtgttgaatgaaaaattattggagagggtaaaagttgaatgagtattgaataaaagaaagaaaatgatacggagtgttgagaattga 33526729  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||| |||||||||||||    
T  33526728 aaaagtggatgttgaatg 33526711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 173
Target Start/End: Original strand, 40596724 - 40596788
Alignment:
Q  109 tggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataa 173  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||    
T  40596724 tggtggggtagagtgttgaatgaaaaaccattggagagagtaaaagttgaataagtgttgaataa 40596788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 109 - 175
Target Start/End: Original strand, 39533243 - 39533309
Alignment:
Q  109 tggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataaga 175  Q
    ||||||||||||||||||||||||||| ||||| ||| |||||||||||||||| ||||||||||||    
T  39533243 tggtggggtagagtgttgaatgaaaaatcattgtagatggtaaaagttgaatgaatgttgaataaga 39533309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 55408529 - 55408598
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaacc-attggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    |||||||||||||||||||||||||||| | ||||||||  |||||||||||||||||||||||||||||    
T  55408529 gtggtggggtagagtgttgaatgaaaaaactattggagatagtaaaagttgaatgagtgttgaataagag 55408598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 19409242 - 19409174
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    ||||||||| |||||||||||||||||||||||||||| | |||||||||||||| | |||||||||||    
T  19409242 gtggtggggaagagtgttgaatgaaaaaccattggagatgataaaagttgaatgaatattgaataagag 19409174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 51392340 - 51392272
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    ||||||||||| |||||||||||||||||||||| ||| ||||||||||||| || |||||||||||||    
T  51392340 gtggtggggtaaagtgttgaatgaaaaaccattgaagagggtaaaagttgaacgaatgttgaataagag 51392272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 53348021 - 53348086
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataa 173  Q
    |||||||||||| ||||||||||||||| ||||||||| |||||||||| ||||| ||||||||||    
T  53348021 gtggtggggtagggtgttgaatgaaaaatcattggagagggtaaaagttaaatgactgttgaataa 53348086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 2215242 - 2215360
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||| |||||||||||||||| ||||||        | || || |||||||||||||    
T  2215242 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgagtgttgaattaagagagagaaaattatgtggagtgttgggaatt 2215340  T
Q  206 gaaaaaatggatgttgaatg 225  Q
    |||||| ||| |||||||||    
T  2215341 gaaaaagtgggtgttgaatg 2215360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 18469328 - 18469390
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||  ||||||||    
T  18469328 gtggtggggtagagtgttgaatgaaaaaccattggag-aggtaaaaattgaatggatgttgaat 18469390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 46917471 - 46917589
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||| ||||||| |||||||| ||||||        |||| || |||||||||||||    
T  46917471 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgttgaattaagagagagaaaatgatgtggagtgttgggaatt 46917569  T
Q  206 gaaaaaatggatgttgaatg 225  Q
    |||||| ||| |||||||||    
T  46917570 gaaaaagtgggtgttgaatg 46917589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 122 - 224
Target Start/End: Complemental strand, 34564221 - 34564119
Alignment:
Q  122 tgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattgaaaaaatggatgttg 221  Q
    |||||||| ||||||||||| ||| |||||||||| ||||| |||||||||||||        | |||| |||||||| ||||| |||||||||||||||    
T  34564221 tgttgaataaaaaaccattgaagagggtaaaagttaaatgaatgttgaataagagagagaaaataatataaagtgttgagaattaaaaaaatggatgttg 34564122  T
Q  222 aat 224  Q
    |||    
T  34564121 aat 34564119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 224
Target Start/End: Complemental strand, 40721147 - 40721030
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||||| ||||||| |||||||| ||||||        |||| || |||||||||||||    
T  40721147 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgttgaattaagagagagaaaatgatgtggagtgttgggaatt 40721049  T
Q  206 gaaaaaatggatgttgaat 224  Q
    |||||| ||| ||||||||    
T  40721048 gaaaaagtgggtgttgaat 40721030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 3533267 - 3533383
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||| ||||||| |||||||| ||||||        |||| || |||||||||||||    
T  3533267 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgttgaattaagagagagaaaatgatgtggagtgttgggaatt 3533365  T
Q  206 gaaaaaatggatgttgaa 223  Q
    |||||| ||| |||||||    
T  3533366 gaaaaagtgggtgttgaa 3533383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 34199229 - 34199345
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| |||||||||| ||||| |||||||| |||||||| ||||||| |||||||| ||||||        |||| || |||||||||||||    
T  34199229 gtggtggggtagggtgttgaatgaaaaaatcattggag-aggtaaaaattgaatgggtgttgaattaagagagagaaaatgatgtggagtgttgggaatt 34199327  T
Q  206 gaaaaaatggatgttgaa 223  Q
    |||||| |||||||||||    
T  34199328 gaaaaagtggatgttgaa 34199345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 3618414 - 3618529
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaattg 206  Q
    |||||||||||| ||||||||| |||||||||||||| |||||||| ||||| | |||||||| ||||||        |||| || ||||||||||||||    
T  3618414 gtggtggggtagggtgttgaataaaaaaccattggag-aggtaaaaattgaaagggtgttgaattaagagagagaaaatgatgtggagtgttgggaattg 3618512  T
Q  207 aaaaaatggatgttgaa 223  Q
    ||||| ||| |||||||    
T  3618513 aaaaagtgggtgttgaa 3618529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 176
Target Start/End: Complemental strand, 36656669 - 36656601
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    ||||||| |||||||||||||||||||| ||| |||||  ||||||||||||||||| |||| ||||||    
T  36656669 gtggtggagtagagtgttgaatgaaaaatcatcggagagtgtaaaagttgaatgagtattgattaagag 36656601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 38173667 - 38173552
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||||| ||| |||||||||||| ||||||        |||| || |||||||||||||    
T  38173667 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattggatgagtgttgaattaagagagagaaaatgatgtggagtgttgggaatt 38173569  T
Q  206 gaaaaaatggatgttga 222  Q
    |||||| ||| ||||||    
T  38173568 gaaaaagtgggtgttga 38173552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 222
Target Start/End: Original strand, 55560439 - 55560554
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||| ||||||  |||||||| ||||||        |||| || |||||||||||||    
T  55560439 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaataggtgttgaattaagagagagaaaatgatgtggagtgttgggaatt 55560537  T
Q  206 gaaaaaatggatgttga 222  Q
    |||||| ||||||||||    
T  55560538 gaaaaagtggatgttga 55560554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 45081371 - 45081488
Alignment:
Q  108 gtggtggggtagagtgttgaatg--aaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaat 204  Q
    |||||||||||| ||||||||||  |||||||||||||| |||||||| |||||||||||||||| || |||        |||| || ||||||||||||    
T  45081371 gtggtggggtagggtgttgaatgaaaaaaaccattggag-aggtaaaaattgaatgagtgttgaattatgagagagaaaatgatgtggagtgttgggaat 45081469  T
Q  205 tgaaaaaatggatgttgaa 223  Q
    ||||||| ||| |||||||    
T  45081470 tgaaaaagtgggtgttgaa 45081488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 6290712 - 6290596
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||| ||| ||||||||||| ||||||||||||| |||||||| ||||||| |||||||| ||||||        |||| || |||||||||||||    
T  6290712 gtggtgggatagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgttgaattaagagagagaaaatgatgtggagtgttgggaatt 6290614  T
Q  206 gaaaaaatggatgttgaa 223  Q
    |||||| ||| |||||||    
T  6290613 gaaaaagtgggtgttgaa 6290596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 8991895 - 8991779
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||||| ||||||| |||||||| ||||||        |||| || |||||||||||||    
T  8991895 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgttgaattaagagagagaaaatgatgtggagtgttgggaatt 8991797  T
Q  206 gaaaaaatggatgttgaa 223  Q
     ||||| ||| |||||||    
T  8991796 caaaaagtgggtgttgaa 8991779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 23540386 - 23540449
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    ||||||||||||||||||||||| ||||| |||||||| |||||||| ||||||| |||||||||    
T  23540386 gtggtggggtagagtgttgaatgaaaaaatcattggag-aggtaaaaattgaatgggtgttgaat 23540449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 27142290 - 27142353
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||| ||||||| |||||||||    
T  27142290 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgttgaat 27142353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 28899444 - 28899381
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||||||||||||||| ||||||||| ||| |||||||| ||||||| |||||||||    
T  28899444 gtggtggggtagagtgttgaatgaaaaaaccattagag-aggtaaaaattgaatgggtgttgaat 28899381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 33604769 - 33604706
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaa-ccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||| ||||| ||||||||||||| |||||||||| ||||||| |||||||||||||||||    
T  33604769 gtggtgggatagagagttgaatgaaaaaaccattggaga-ggtaaaaattgaatgagtgttgaat 33604706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 48506566 - 48506629
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    ||||||||||||||||||| ||| |||||||||||||| || ||||| |||||||||||||||||    
T  48506566 gtggtggggtagagtgttgcatgaaaaaaccattggag-agttaaaaattgaatgagtgttgaat 48506629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 13094350 - 13094466
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| |||||||||| |||||| ||||||| || ||||| ||||||| |||||||| || |||        |||| || |||||||||||||    
T  13094350 gtggtggggtagggtgttgaatgaaaaaactattggag-agataaaaattgaatgggtgttgaattatgagagagaaaatgatgtggagtgttgggaatt 13094448  T
Q  206 gaaaaaatggatgttgaa 223  Q
    |||||||||| |||||||    
T  13094449 gaaaaaatgggtgttgaa 13094466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 16020959 - 16020843
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||||| |||||||  ||||||| ||||||        | || || |||||||||||||    
T  16020959 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatggatgttgaattaagagagagaaaataatgtggagtgttgggaatt 16020861  T
Q  206 gaaaaaatggatgttgaa 223  Q
    |||||| ||| |||||||    
T  16020860 gaaaaagtgggtgttgaa 16020843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 176
Target Start/End: Original strand, 55885 - 55944
Alignment:
Q  116 gtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    |||||||||||||||||||||||||| ||| | |||||||| |||||  ||||||||||||    
T  55885 gtagagtgttgaatgaaaaaccattgaagatgataaaagtt-aatgaaagttgaataagag 55944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 13110673 - 13110610
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||| ||| ||||||||||| ||||||||||||| |||||||| ||||||| |||||||||    
T  13110673 gtggtgggttagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgttgaat 13110610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 167
Target Start/End: Original strand, 33077834 - 33077893
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgtt 167  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||| ||||||| |||||    
T  33077834 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgtt 33077893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 34463984 - 34464046
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    ||||||||||||  ||||||||||||||| ||||||| |||||||| ||||| | |||||||||    
T  34463984 gtggtggggtaggatgttgaatgaaaaactattggag-aggtaaaaattgaaagggtgttgaat 34464046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 48403859 - 48403923
Alignment:
Q  108 gtggtggggtagagtgttgaatg--aaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||| ||||||| ||||||||||  ||||| ||||||||| ||||||| |||||||||||||||||    
T  48403859 gtggcggggtagggtgttgaatggaaaaaatcattggaga-ggtaaaaattgaatgagtgttgaat 48403923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 171
Target Start/End: Complemental strand, 52017457 - 52017393
Alignment:
Q  109 tggtggggtagagtgttgaa--tgaaaaa-ccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    ||||||||||| ||||||||  ||||||| |||||||||| ||||||| |||||||||||||||||    
T  52017457 tggtggggtagggtgttgaaaatgaaaaaaccattggaga-ggtaaaaattgaatgagtgttgaat 52017393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 223
Target Start/End: Original strand, 16174975 - 16175091
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| |||||||||| |||||| ||||||| |||||||| ||||| | |||||||| ||||||        |||| || |||||||  ||||    
T  16174975 gtggtggggtagggtgttgaatgaaaaaactattggag-aggtaaaaattgaaagggtgttgaattaagagtgagaaaatgatgtggagtgttgaaaatt 16175073  T
Q  206 gaaaaaatggatgttgaa 223  Q
    |||||||||| |||||||    
T  16175074 gaaaaaatgggtgttgaa 16175091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 171
Target Start/End: Original strand, 23389890 - 23389952
Alignment:
Q  110 ggtggggtagagtgttgaatg--aaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||| ||||||||||||  |||||||||||||| |||||| | |||||||||| ||||||    
T  23389890 ggtggggttgagtgttgaatgaaaaaaaccattggag-aggtaacaattgaatgagtattgaat 23389952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 27863827 - 27863764
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||||||||||||||| ||||  ||||||| |||||||| |||||||  ||||||||    
T  27863827 gtggtggggtagagtgttgaatgaaaaaattattggag-aggtaaaaattgaatggatgttgaat 27863764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 4e-31; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 109 - 225
Target Start/End: Original strand, 29428480 - 29428596
Alignment:
Q  109 tggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattgaa 208  Q
    |||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||        |||| || ||||||||||||||||    
T  29428480 tggtggggtagagtgttgaatgaaaaaccatttgagagtgtaaaagttgaatgagtgttgaataagagagagaaaatgatgtggagtgttgggaattgaa 29428579  T
Q  209 aaaatggatgttgaatg 225  Q
    ||| |||||||||||||    
T  29428580 aaagtggatgttgaatg 29428596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 6380450 - 6380566
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||        |||| || |||||||||||||||    
T  6380450 gtggtggggtagagtgttgaatgaaaaaccattggagagggtaaaagttgaatgtgtgttgaataagagagagaaaatgatgtggagtgttgggaattga 6380549  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||| ||| |||||||||    
T  6380550 aaaagtgg-tgttgaatg 6380566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 176
Target Start/End: Original strand, 6725586 - 6725654
Alignment:
Q  109 tggtggggtagagtgttgaatgaaaa-accattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    |||||||||||||||||||||||||| ||||||| |||  |||||||||||||||||||||||||||||    
T  6725586 tggtggggtagagtgttgaatgaaaaaaccattgaagatagtaaaagttgaatgagtgttgaataagag 6725654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 223
Target Start/End: Complemental strand, 8670000 - 8669885
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaattg 206  Q
    |||||||||||| |||||||||||||||||||||||| |||||||| ||||||| |||||||| ||||||        | || ||||||||||| |||||    
T  8670000 gtggtggggtagggtgttgaatgaaaaaccattggag-aggtaaaaattgaatgggtgttgaattaagagagagaaaataatgtgaagtgttggaaattg 8669902  T
Q  207 aaaaaatggatgttgaa 223  Q
    ||||| |||||||||||    
T  8669901 aaaaagtggatgttgaa 8669885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 631629 - 631511
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaat-aagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||||| ||||||||||||||||| |||||        |||| || |||||||||||||    
T  631629 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgagtgttgaatgaagagagagaaaatgatgtggagtgttgggaatt 631531  T
Q  206 gaaaaaatggatgttgaatg 225  Q
    |||||| ||| |||||||||    
T  631530 gaaaaagtgggtgttgaatg 631511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 8219056 - 8218993
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||    
T  8219056 gtggtggggtagagtgttgaatgaaaaaaccattggag-aggtaaaagttgaatgggtgttgaat 8218993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 32359855 - 32359788
Alignment:
Q  109 tggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagag 176  Q
    ||||||||||||  |||||||||||||| |||||||| ||||||| | ||||||||||||||||||||    
T  32359855 tggtggggtagaacgttgaatgaaaaactattggagagggtaaaaatggaatgagtgttgaataagag 32359788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 34328392 - 34328274
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| ||||||||||| ||||||||||||| | |||||| |||||||||||||||| ||||||        |||| || |||||||||||||    
T  34328392 gtggtggggtagggtgttgaatgaaaaaaccattggag-atgtaaaaattgaatgagtgttgaattaagagagataaaatgatgtggagtgttgggaatt 34328294  T
Q  206 gaaaaaatggatgttgaatg 225  Q
    |||||| ||| |||||||||    
T  34328293 gaaaaagtgggtgttgaatg 34328274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 167
Target Start/End: Original strand, 25834617 - 25834675
Alignment:
Q  109 tggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgtt 167  Q
    ||||||||||||||||| || |||||||||||||||| |||||||||||||| ||||||    
T  25834617 tggtggggtagagtgttcaacgaaaaaccattggagagggtaaaagttgaattagtgtt 25834675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 30446355 - 30446240
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||||||||||||||| |||| |||||||| |||||||| ||||||| |||||||| ||||||        |||| || |||||| ||||||    
T  30446355 gtggtggggtagagtgttgaatgaaaaaatcattggag-aggtaaaaattgaatgggtgttgaattaagagagagaaaatgatgtggagtgttaggaatt 30446257  T
Q  206 gaaaaaatggatgttga 222  Q
    |||||||||| ||||||    
T  30446256 gaaaaaatgggtgttga 30446240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 211
Target Start/End: Complemental strand, 34838691 - 34838588
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaattg 206  Q
    |||||||||||| ||||||||| |||||||||||||| |||||||| ||||||| |||||||| ||||||        |||| || ||||||||||||||    
T  34838691 gtggtggggtagggtgttgaataaaaaaccattggag-aggtaaaaattgaatgggtgttgaattaagagagagaaaatgatgtggagtgttgggaattg 34838593  T
Q  207 aaaaa 211  Q
    |||||    
T  34838592 aaaaa 34838588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 173
Target Start/End: Complemental strand, 22627946 - 22627881
Alignment:
Q  109 tggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaag-ttgaatgagtgttgaataa 173  Q
    ||||||||||||||| ||||||||||| ||||||||||| |||||| |||||||  ||||||||||    
T  22627946 tggtggggtagagtgctgaatgaaaaatcattggagaagataaaagtttgaatggatgttgaataa 22627881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 2503336 - 2503273
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||| ||||||||||| ||||||||||||| |||||||| ||||||| |||||||||    
T  2503336 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgggtgttgaat 2503273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 12513024 - 12512961
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||||||||||||||| |||| |||||||| |||||||| ||||||| |||||||||    
T  12513024 gtggtggggtagagtgttgaatgaaaaaatcattggag-aggtaaaaattgaatgggtgttgaat 12512961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 225
Target Start/End: Complemental strand, 197915 - 197797
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaac-cattggagaaggtaaaagttgaatgagtgttgaat-aagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| |||||||||||||||  ||||||||| | ||||| ||||||| ||||||||| |||||        |||  || |||||||||||||    
T  197915 gtggtggggtagggtgttgaatgaaaaaatcattggagatg-taaaaattgaatgggtgttgaattaagagagagaaaatgacgtggagtgttgggaatt 197817  T
Q  206 gaaaaaatggatgttgaatg 225  Q
    |||||| |||||||||||||    
T  197816 gaaaaagtggatgttgaatg 197797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 172
Target Start/End: Complemental strand, 34242417 - 34242353
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaata 172  Q
    |||||||||||||||||||||||| |||| |||||||| |||||| | ||||||| ||||||||||    
T  34242417 gtggtggggtagagtgttgaatgaaaaaatcattggag-aggtaagaattgaatgggtgttgaata 34242353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 223
Target Start/End: Complemental strand, 8660657 - 8660554
Alignment:
Q  121 gtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaattgaaaaaatggatg 218  Q
    ||||||||||| ||||||||||||| |||||||| ||||||| |||||||| ||||||        |||| || ||||||||||||||||||| ||| ||    
T  8660657 gtgttgaatgaaaaaaccattggag-aggtaaaaattgaatgtgtgttgaattaagagagagaaaatgatgtggagtgttgggaattgaaaaagtgggtg 8660559  T
Q  219 ttgaa 223  Q
    |||||    
T  8660558 ttgaa 8660554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 222
Target Start/End: Complemental strand, 10883983 - 10883868
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    ||||||||||||  |||||||||| |||| |||||||| |||||||| ||||||| |||||||| ||||||        |||| || |||||||| ||||    
T  10883983 gtggtggggtaggatgttgaatgaaaaaatcattggag-aggtaaaaattgaatgggtgttgaattaagagagagaaaatgatgtggagtgttggaaatt 10883885  T
Q  206 gaaaaaatggatgttga 222  Q
    |||||| ||||||||||    
T  10883884 gaaaaagtggatgttga 10883868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 12501943 - 12501880
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||||||||||||||| |||| |||| ||| |||||||| ||||||| |||||||||    
T  12501943 gtggtggggtagagtgttgaatgaaaaaatcattagag-aggtaaaaattgaatgggtgttgaat 12501880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 24348544 - 24348481
Alignment:
Q  108 gtggtggggtagagtgttgaatga-aaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||||||||||||||| |||||||||| || |||||||| |||||||  ||||||||    
T  24348544 gtggtggggtagagtgttgaatgaaaaaaccattgaag-aggtaaaaattgaatggatgttgaat 24348481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 26654296 - 26654359
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||| |||||||||| |||||| ||||||| |||||||| ||||||| |||||||||    
T  26654296 gtggtggggtagggtgttgaatgaaaaaactattggag-aggtaaaaattgaatgggtgttgaat 26654359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 26760266 - 26760329
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||| |||||||||| |||||| ||||||| |||||||| ||||||| |||||||||    
T  26760266 gtggtggggtagggtgttgaatgaaaaaactattggag-aggtaaaaattgaatgggtgttgaat 26760329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 17961224 - 17961342
Alignment:
Q  108 gtggtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaatt 205  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||| ||| |||  ||||||| ||||||        | || || |||||||||||||    
T  17961224 gtggtggggtagggtgttgaatgaaaaaaccattggag-aggtaaaaattgtatgtttgttgaattaagagagagaaaattatgtggagtgttgggaatt 17961322  T
Q  206 gaaaaaatggatgttgaatg 225  Q
    |||||| ||| |||||||||    
T  17961323 gaaaaagtgggtgttgaatg 17961342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 225
Target Start/End: Original strand, 30499 - 30616
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattga 207  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||        | ||||| ||||||| |||||||    
T  30499 gtggtggggtagagtgttgaatgaaaaaccattggagagagtaaaagttgaataagtgttgaataagagagagaaaattatatggagtgttgagaattga 30598  T
Q  208 aaaaatggatgttgaatg 225  Q
    |||| |||||||||||||    
T  30599 aaaagtggatgttgaatg 30616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 113 - 225
Target Start/End: Complemental strand, 124119 - 124009
Alignment:
Q  113 ggggtagagtgttgaatgaaaaaccattggagaaggtaaaagttgaatgagtgttgaataagagnnnnnnnntgatatgaagtgttgggaattgaaaaaa 212  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||        |||| || |||||||| ||||||||||     
T  124119 ggggtagagtgttgaatgaaaaaccattggagatggtaaaagttgaatgagtgttgaataagag--aaaaaatgatgtggagtgttggaaattgaaaaag 124022  T
Q  213 tggatgttgaatg 225  Q
    |||||||||||||    
T  124021 tggatgttgaatg 124009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 222
Target Start/End: Original strand, 57706 - 57818
Alignment:
Q  111 gtggggtagagtgttgaatg-aaaaaccattggagaaggtaaaagttgaatgagtgttgaa-taagagnnnnnnnntgatatgaagtgttgggaattgaa 208  Q
    ||||||||| |||||||||| ||||||||||| || |||||||| ||||||| |||||||| ||||||        |||| || ||||||||||||||||    
T  57706 gtggggtagggtgttgaatgaaaaaaccattgaag-aggtaaaaattgaatgggtgttgaattaagagagagaaaatgatgtggagtgttgggaattgaa 57804  T
Q  209 aaaatggatgttga 222  Q
    ||| ||| ||||||    
T  57805 aaagtgggtgttga 57818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 66032 - 66095
Alignment:
Q  108 gtggtggggtagagtgttgaatgaaaaacc-attggagaaggtaaaagttgaatgagtgttgaat 171  Q
    |||||||||||| |||||||||||||||   |||| ||| ||||||| |||||||||||||||||    
T  66032 gtggtggggtagggtgttgaatgaaaaaattattgaaga-ggtaaaaattgaatgagtgttgaat 66095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University