View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3491_low_2 (Length: 679)

Name: NF3491_low_2
Description: NF3491
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3491_low_2
NF3491_low_2
[»] chr5 (22 HSPs)
chr5 (73-663)||(15118868-15119462)
chr5 (134-236)||(39030565-39030667)
chr5 (126-232)||(39030561-39030667)
chr5 (126-228)||(2424436-2424538)
chr5 (156-234)||(33498365-33498443)
chr5 (160-232)||(968314-968386)
chr5 (126-232)||(19644397-19644502)
chr5 (134-232)||(33669933-33670031)
chr5 (126-232)||(34252723-34252829)
chr5 (145-233)||(504129-504215)
chr5 (125-232)||(14646359-14646466)
chr5 (171-233)||(26835273-26835335)
chr5 (159-212)||(28023954-28024007)
chr5 (133-221)||(2884046-2884133)
chr5 (132-236)||(15119301-15119405)
chr5 (132-232)||(42324884-42324984)
chr5 (126-236)||(14646364-14646474)
chr5 (159-232)||(17234563-17234636)
chr5 (159-208)||(17858198-17858247)
chr5 (151-232)||(38958067-38958148)
chr5 (184-233)||(39015006-39015055)
chr5 (154-230)||(21019430-21019506)
[»] chr2 (25 HSPs)
chr2 (126-232)||(31469077-31469183)
chr2 (126-232)||(10459272-10459378)
chr2 (134-229)||(11386318-11386413)
chr2 (156-233)||(7932748-7932825)
chr2 (126-232)||(16180433-16180539)
chr2 (154-231)||(25089941-25090017)
chr2 (156-232)||(944777-944853)
chr2 (159-234)||(2884260-2884335)
chr2 (126-232)||(31469069-31469175)
chr2 (183-232)||(29291119-29291168)
chr2 (156-213)||(33615276-33615333)
chr2 (175-232)||(33829395-33829452)
chr2 (160-232)||(19924310-19924382)
chr2 (129-236)||(43398840-43398947)
chr2 (164-222)||(35693934-35693992)
chr2 (159-232)||(43398869-43398942)
chr2 (168-232)||(17437166-17437230)
chr2 (126-234)||(24037588-24037696)
chr2 (125-232)||(4224974-4225081)
chr2 (126-236)||(41912075-41912186)
chr2 (126-196)||(17437168-17437238)
chr2 (126-232)||(38935369-38935475)
chr2 (126-222)||(2884254-2884350)
chr2 (177-221)||(35311233-35311277)
chr2 (156-232)||(41374557-41374633)
[»] chr1 (13 HSPs)
chr1 (126-234)||(3739812-3739920)
chr1 (127-232)||(29855064-29855169)
chr1 (126-232)||(3739820-3739926)
chr1 (156-232)||(5056322-5056398)
chr1 (156-232)||(3694015-3694091)
chr1 (126-232)||(29846631-29846737)
chr1 (160-233)||(47543604-47543677)
chr1 (156-224)||(6061488-6061556)
chr1 (153-196)||(26265804-26265847)
chr1 (129-196)||(31784777-31784844)
chr1 (155-221)||(15343239-15343305)
chr1 (155-233)||(19758298-19758376)
chr1 (159-207)||(27357833-27357881)
[»] chr8 (11 HSPs)
chr8 (154-233)||(8777774-8777853)
chr8 (156-233)||(9548077-9548154)
chr8 (156-234)||(33557803-33557881)
chr8 (134-234)||(35901041-35901141)
chr8 (156-225)||(13209977-13210046)
chr8 (179-233)||(8637234-8637288)
chr8 (153-232)||(37627935-37628013)
chr8 (134-232)||(7974792-7974890)
chr8 (166-232)||(29110997-29111063)
chr8 (134-198)||(9294566-9294631)
chr8 (160-212)||(11196249-11196301)
[»] chr3 (15 HSPs)
chr3 (126-232)||(32221468-32221574)
chr3 (156-235)||(31280158-31280237)
chr3 (125-202)||(45610470-45610547)
chr3 (180-236)||(40905804-40905860)
chr3 (128-234)||(46829053-46829152)
chr3 (134-237)||(47783079-47783182)
chr3 (167-232)||(26439323-26439387)
chr3 (153-230)||(40955786-40955863)
chr3 (160-232)||(26914481-26914553)
chr3 (156-232)||(29637461-29637537)
chr3 (123-234)||(46829044-46829148)
chr3 (157-224)||(5307341-5307408)
chr3 (127-207)||(15282638-15282718)
chr3 (134-230)||(30806939-30807035)
chr3 (130-186)||(32729504-32729560)
[»] scaffold2113 (1 HSPs)
scaffold2113 (126-232)||(575-680)
[»] scaffold0072 (1 HSPs)
scaffold0072 (156-233)||(20390-20467)
[»] chr4 (13 HSPs)
chr4 (134-234)||(12276824-12276924)
chr4 (126-201)||(1083797-1083872)
chr4 (156-236)||(30848618-30848700)
chr4 (167-237)||(54235261-54235331)
chr4 (159-232)||(4423155-4423228)
chr4 (177-237)||(18995180-18995240)
chr4 (177-232)||(55827290-55827345)
chr4 (135-232)||(54235228-54235325)
chr4 (156-232)||(24980653-24980729)
chr4 (134-230)||(48514542-48514637)
chr4 (177-232)||(55762913-55762968)
chr4 (151-221)||(4479599-4479669)
chr4 (126-174)||(55762928-55762976)
[»] scaffold0034 (1 HSPs)
scaffold0034 (125-232)||(94952-95059)
[»] chr6 (13 HSPs)
chr6 (129-232)||(31323820-31323923)
chr6 (156-222)||(8211799-8211865)
chr6 (138-232)||(28004633-28004727)
chr6 (156-234)||(35003763-35003841)
chr6 (125-233)||(35003756-35003864)
chr6 (156-231)||(9829898-9829973)
chr6 (128-234)||(1986208-1986314)
chr6 (167-232)||(8437813-8437878)
chr6 (154-207)||(33822319-33822372)
chr6 (134-236)||(13422134-13422236)
chr6 (126-232)||(14446702-14446808)
chr6 (156-230)||(26395283-26395357)
chr6 (182-232)||(28596081-28596131)
[»] chr7 (13 HSPs)
chr7 (158-232)||(5026146-5026220)
chr7 (134-228)||(16866407-16866501)
chr7 (156-234)||(30794445-30794523)
chr7 (159-236)||(23971216-23971292)
chr7 (138-232)||(16866407-16866501)
chr7 (128-234)||(18731990-18732095)
chr7 (156-232)||(47967919-47967995)
chr7 (156-230)||(4259334-4259408)
chr7 (129-196)||(6803308-6803375)
chr7 (126-197)||(27147595-27147666)
chr7 (191-236)||(27147599-27147644)
chr7 (167-232)||(44816473-44816538)
chr7 (178-226)||(34515855-34515903)
[»] scaffold0097 (1 HSPs)
scaffold0097 (126-221)||(37928-38023)
[»] scaffold0236 (1 HSPs)
scaffold0236 (167-229)||(14543-14605)
[»] scaffold0027 (1 HSPs)
scaffold0027 (153-237)||(13175-13259)


Alignment Details
Target: chr5 (Bit Score: 352; Significance: 0; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 73 - 663
Target Start/End: Complemental strand, 15119462 - 15118868
Alignment:
Q  73 tttactttagtcatttgtggctaatttttattggatgtttagatcatacttattccgtcctaaaatataaacaaaatttggttaacataagttaatgtat 172  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||| |||    
T  15119462 tttacttttgtcatttgtggctaatttttattggatgcttagatcatgcttattccgttctaaaatataaacaaaaattggttaatataagttaatatat 15119363  T
Q  173 ttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatattttagaatatgaggaatattgtaagagacatctagaacaaagg 272  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  15119362 ttaatacaaattttgaatcaaatacattaagttttattgactaatttttgcttatattttagaatatgaggaatattgtaagagacatctataataaagg 15119263  T
Q  273 taaattaactccctnnnnnnnnggttgattaaagaaaacagtgatcaaggtaataaataat--ttaattttccttnnnnnnnntaattgttaannnnnnn 370  Q
    ||||||||||||||        |||  ||||||||||||||||||||||||||||||||||  |||||||| |||         |||||||||           
T  15119262 taaattaactccctgaaaaaaaggtaaattaaagaaaacagtgatcaaggtaataaataattgttaatttttcttaaaaaaaaaaattgttaattttttt 15119163  T
Q  371 ctctttgcattgtaggattgactaaattaaaaatatttcagatagttaatctttaca--tttattaaaccacctcacttaaggttgaactaactcaagaa 468  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  15119162 ctctttgcattgtaggattgactaaattaaaaatatttcagatagttaatctttacatttttattaaaccacctcacttaaggttgaactaactcaagaa 15119063  T
Q  469 cacgtaagaaagaaaagnnnnnnnnnggaattaatagtgattgaacaatgtaaatgggaatacannnnnnngtactaccttgcttaaggtttcaaaggca 568  Q
    |||||||||||||| |          |||||||||||||||||||||||||||||| |||||||       |||||||||||||||| ||||||||||||    
T  15119062 cacgtaagaaagaagaagaaaaaaaaggaattaatagtgattgaacaatgtaaatgagaatacatttttttgtactaccttgcttaatgtttcaaaggca 15118963  T
Q  569 aaacatggataaggaagttgctattagtgatgttattatctggtggttgcatatgtaaaatggatgtcaaagtatatttcatcatgaaagttttg 663  Q
    |||||||||||||    |   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15118962 aaacatggataagttgctatatattagtgatgttattatctggtggttgcatatgtaaaatggatgtcaaagtatatttcatcatgaaagttttg 15118868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 134 - 236
Target Start/End: Complemental strand, 39030667 - 39030565
Alignment:
Q  134 aaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttta 233  Q
    ||||||||| ||||| || || |||| ||||||||||||||  |||||||||| ||||||||| ||||| |||| ||||| |||||||||||||||||||    
T  39030667 aaaatataagcaaaaattagtcaacaaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttatatttta 39030568  T
Q  234 gaa 236  Q
    |||    
T  39030567 gaa 39030565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 39030561 - 39030667
Alignment:
Q  126 tccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgctt 225  Q
    ||||| ||||||||||| ||||| ||||| |||| ||||||||||||||  |  ||| |||| |||||||| ||||| |||| |||||||||||||||||    
T  39030561 tccgttctaaaatataagcaaaaattggtcaacaaaagttaatgtatttggttaaaaatttgtaccaaatacattaacttttgttgactaatttttgctt 39030660  T
Q  226 atatttt 232  Q
    |||||||    
T  39030661 atatttt 39030667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 2424436 - 2424538
Alignment:
Q  126 tccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgctt 225  Q
    ||||| ||||||||||| ||||| || ||||||||||| | |||||| |  |||||||||||||||||||| ||||| |||||| ||| |||||||| ||    
T  2424436 tccgtgctaaaatataagcaaaaatttgttaacataagctgatgtatatggtacaaattttgaaccaaatacattaacttttatcgaccaatttttgttt 2424535  T
Q  226 ata 228  Q
    |||    
T  2424536 ata 2424538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 156 - 234
Target Start/End: Complemental strand, 33498443 - 33498365
Alignment:
Q  156 aacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatattttag 234  Q
    |||||||||| ||||||||  |||||||||||||||||||||||| | |||| ||| | || |||||||||||||||||    
T  33498443 aacataagttgatgtattttgtacaaattttgaaccaaatatattgatttttgttggccaacttttgcttatattttag 33498365  T

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Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 160 - 232
Target Start/End: Original strand, 968314 - 968386
Alignment:
Q  160 taagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    |||||| ||||||||  |||||||||||||| ||||||||||| |||| |||||| |||||| ||||||||||    
T  968314 taagttgatgtatttggtacaaattttgaactaaatatattaatttttgttgactcatttttacttatatttt 968386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 19644397 - 19644502
Alignment:
Q  126 tccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgctt 225  Q
    |||||||||||||||||||||||  |  || ||||||||| ||||||||| || |||||||||||||||||  |||| |||| ||||  |||| || |||    
T  19644397 tccgtcctaaaatataaacaaaa-ataatttacataagttgatgtatttagtataaattttgaaccaaatacgttaatttttgttgatcaattcttactt 19644495  T
Q  226 atatttt 232  Q
    |||||||    
T  19644496 atatttt 19644502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 33669933 - 33670031
Alignment:
Q  134 aaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    ||||| ||| ||||| | ||| ||||||||||| ||||| |  |||||||||| ||||||||| ||||| |||| ||||| |||||||||||| |||||    
T  33669933 aaaatgtaagcaaaaatgggtcaacataagttagtgtatctggtacaaattttaaaccaaatacattaactttttttgaccaatttttgcttacatttt 33670031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 34252829 - 34252723
Alignment:
Q  126 tccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgctt 225  Q
    ||||||| ||||| ||| ||||| | |||||||||||||| ||| || |   | ||||||||||||||||| ||||| |||| ||||| |||||||||||    
T  34252829 tccgtcccaaaatgtaagcaaaaatgggttaacataagttgatgaatgtggcataaattttgaaccaaatacattaacttttgttgaccaatttttgctt 34252730  T
Q  226 atatttt 232  Q
    | |||||    
T  34252729 acatttt 34252723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 145 - 233
Target Start/End: Complemental strand, 504215 - 504129
Alignment:
Q  145 aaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttta 233  Q
    |||| ||||| |||| || ||||||||||| ||||||||| ||||||||  ||||||| |||| |||||  ||||||||||||||||||    
T  504215 aaaagttggtcaacaaaaattaatgtatttgatacaaattctgaaccaa--atattaatttttgttgaccgatttttgcttatatttta 504129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 125 - 232
Target Start/End: Original strand, 14646359 - 14646466
Alignment:
Q  125 ttccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgct 224  Q
    |||||| |||||||||||  |||| |  || || |||| |||||||||||| ||||||||||||| || ||| ||||| ||||||| |  |||||| |||    
T  14646359 ttccgttctaaaatataagtaaaaataagtcaatataaattaatgtatttagtacaaattttgaatcatatacattaatttttatttatcaattttcgct 14646458  T
Q  225 tatatttt 232  Q
    ||||||||    
T  14646459 tatatttt 14646466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 171 - 233
Target Start/End: Original strand, 26835273 - 26835335
Alignment:
Q  171 atttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttta 233  Q
    |||| ||||||||||| ||||||||||||||| |||| ||||| | |||||| ||||||||||    
T  26835273 atttgatacaaatttttaaccaaatatattaacttttgttgaccactttttgtttatatttta 26835335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 28023954 - 28024007
Alignment:
Q  159 ataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattga 212  Q
    ||||||||||||||||  ||||||||||||| |||||| ||||| |||||||||    
T  28023954 ataagttaatgtattttgtacaaattttgaatcaaatacattaacttttattga 28024007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 221
Target Start/End: Complemental strand, 2884133 - 2884046
Alignment:
Q  133 taaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaattttt 221  Q
    ||||||||||  |||| ||||| || | || ||||||||||||||||||||||| || |||||| ||||| |||||||||  |||||||    
T  2884133 taaaatataagtaaaaattggtcaataaaatttaatgtatttaatacaaattttaaatcaaatacattaa-ttttattgatcaattttt 2884046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 15119301 - 15119405
Alignment:
Q  132 ctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatattt 231  Q
    ||||||||||| ||||| || || || | || ||||||||||| || |||| |||| |  ||||||||||| || |||| || |||||||| ||||||||    
T  15119301 ctaaaatataagcaaaaattagtcaataaaacttaatgtatttgattcaaaatttgtattaaatatattaacttatattaaccaatttttgtttatattt 15119400  T
Q  232 tagaa 236  Q
    |||||    
T  15119401 tagaa 15119405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 232
Target Start/End: Original strand, 42324884 - 42324984
Alignment:
Q  132 ctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatattt 231  Q
    ||||||||||||  ||| ||||| || |||| || ||||||||  || ||||||| || |||||| ||||| |||| ||||| ||||||| |||||||||    
T  42324884 ctaaaatataaattaaaattggtcaatataaattgatgtatttggtataaattttaaaacaaatacattaacttttgttgaccaatttttacttatattt 42324983  T
Q  232 t 232  Q
    |    
T  42324984 t 42324984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 236
Target Start/End: Complemental strand, 14646474 - 14646364
Alignment:
Q  126 tccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgctt 225  Q
    ||||||| ||||||||| | ||| ||| | || | || ||||||||| | || |||| |||| || ||||| ||||| || |||||||| |||||| |||    
T  14646474 tccgtcccaaaatataagcgaaaattgataaataaaaattaatgtatatgattcaaaatttgtactaaatacattaatttatattgacttatttttactt 14646375  T
Q  226 atattttagaa 236  Q
    |||||||||||    
T  14646374 atattttagaa 14646364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 17234563 - 17234636
Alignment:
Q  159 ataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    |||| |||||||||||  |||||||||| ||| ||||||||||| ||||||| || |||||  |||| ||||||    
T  17234563 ataaattaatgtatttgctacaaattttaaacaaaatatattaatttttatttaccaatttccgcttttatttt 17234636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 17858247 - 17858198
Alignment:
Q  159 ataagttaatgtatttaatacaaattttgaaccaaatatattaagtttta 208  Q
    ||||||| |||||| | ||||||||||||||||||||| ||||| |||||    
T  17858247 ataagttgatgtatctgatacaaattttgaaccaaatacattaattttta 17858198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 232
Target Start/End: Complemental strand, 38958148 - 38958067
Alignment:
Q  151 tggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    |||| ||||| |||| ||||||||  |||||| ||||||||||||| ||||| |||| || |  ||||||| ||||||||||    
T  38958148 tggtcaacatgagttgatgtatttggtacaaaatttgaaccaaatacattaacttttgttaatcaatttttacttatatttt 38958067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 233
Target Start/End: Complemental strand, 39015055 - 39015006
Alignment:
Q  184 tttgaaccaaatatattaagttttattgactaatttttgcttatatttta 233  Q
    ||||||||||||||||||| |||  |||||||||||||| ||| ||||||    
T  39015055 tttgaaccaaatatattaattttagttgactaatttttgtttacatttta 39015006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 154 - 230
Target Start/End: Complemental strand, 21019506 - 21019430
Alignment:
Q  154 ttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatt 230  Q
    ||||||||| ||||||||||| |||| | |||||||  ||| | ||||| ||||||||| ||| |||| ||||||||    
T  21019506 ttaacataaattaatgtattttatacgagttttgaattaaacacattaatttttattgattaaattttacttatatt 21019430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 1e-24; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 31469183 - 31469077
Alignment:
Q  126 tccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgctt 225  Q
    ||||||| ||||||||| ||||| ||||| |||  |||||||||||||| ||||||||||| ||||||||| ||||| |||| ||||| |||||||||||    
T  31469183 tccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttgatacaaatttttaaccaaatacattaacttttgttgaccaatttttgctt 31469084  T
Q  226 atatttt 232  Q
    |||||||    
T  31469083 atatttt 31469077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 10459378 - 10459272
Alignment:
Q  126 tccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgctt 225  Q
    ||||||| ||||| ||| ||||  ||||| |||||||||| ||| || | ||||||||||||||||||||| ||||| |||| ||||| |||||||||||    
T  10459378 tccgtcccaaaatgtaagcaaagattggtcaacataagttgatgcatctgatacaaattttgaaccaaatacattaacttttgttgaccaatttttgctt 10459279  T
Q  226 atatttt 232  Q
    |||||||    
T  10459278 atatttt 10459272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 134 - 229
Target Start/End: Complemental strand, 11386413 - 11386318
Alignment:
Q  134 aaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatat 229  Q
    ||||||||| ||||||||| | |||||||||| |||||||| ||||||||||||||  ||||||||||| |||| ||||  |||||||| ||||||    
T  11386413 aaaatataagcaaaatttgatcaacataagttgatgtatttgatacaaattttgaattaaatatattaatttttgttgatcaatttttgtttatat 11386318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 156 - 233
Target Start/End: Complemental strand, 7932825 - 7932748
Alignment:
Q  156 aacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttta 233  Q
    |||||||||| |||||| | ||| |||||||||||||||||  |||| |||| |||||||||||||||||||||||||    
T  7932825 aacataagttgatgtatctgatataaattttgaaccaaatacgttaacttttgttgactaatttttgcttatatttta 7932748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 16180433 - 16180539
Alignment:
Q  126 tccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgctt 225  Q
    ||||||| ||||| ||| ||||| || || ||||||| || ||||||| |||| ||||||||||||||||| ||||| |||| ||||| || |||| |||    
T  16180433 tccgtcccaaaatgtaagcaaaaattagtcaacataaattgatgtattaaatataaattttgaaccaaatacattaacttttgttgaccaaattttactt 16180532  T
Q  226 atatttt 232  Q
    |||||||    
T  16180533 atatttt 16180539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 25089941 - 25090017
Alignment:
Q  154 ttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatattt 231  Q
    ||||||||||||  ||||||| |||||||||||||| ||||||||| ||||||| || || |||||||||||||||||    
T  25089941 ttaacataagttgttgtatttgatacaaattttgaagcaaatatatgaagttttgtt-accaatttttgcttatattt 25090017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 944853 - 944777
Alignment:
Q  156 aacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    |||||||||| ||||||||  |||||||||||||| ||||| ||||| |||||||||   |||||||||||||||||    
T  944853 aacataagttgatgtatttggtacaaattttgaactaaatacattaacttttattgatcgatttttgcttatatttt 944777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 159 - 234
Target Start/End: Complemental strand, 2884335 - 2884260
Alignment:
Q  159 ataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatattttag 234  Q
    |||| ||||| ||||| ||| ||||||||||||||||| ||||| |||| ||||| ||||||| ||||||||||||    
T  2884335 ataatttaatatatttgatataaattttgaaccaaatacattaatttttgttgacaaatttttacttatattttag 2884260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 31469069 - 31469175
Alignment:
Q  126 tccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgctt 225  Q
    ||||||| ||||||||| ||||| ||||| |||| ||||||||||||||  |  ||| |||| | |||||| ||||| |||  ||||| |||||||||||    
T  31469069 tccgtcccaaaatataagcaaaaattggtcaacaaaagttaatgtatttggttaaaaatttgtatcaaatacattaactttcgttgaccaatttttgctt 31469168  T
Q  226 atatttt 232  Q
    |||||||    
T  31469169 atatttt 31469175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 183 - 232
Target Start/End: Original strand, 29291119 - 29291168
Alignment:
Q  183 ttttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    |||||||||||||||||||| |||||||||| |||||||||||| |||||    
T  29291119 ttttgaaccaaatatattaacttttattgaccaatttttgcttacatttt 29291168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 33615333 - 33615276
Alignment:
Q  156 aacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgac 213  Q
    |||||||||| |||||||| |||||||||||||| ||||||||||||  |||||||||    
T  33615333 aacataagttgatgtatttgatacaaattttgaatcaaatatattaatatttattgac 33615276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 33829452 - 33829395
Alignment:
Q  175 aatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    ||||||||||||| |||||||||||||| |||| ||||| |||||||| |||||||||    
T  33829452 aatacaaattttgtaccaaatatattaatttttgttgaccaatttttgtttatatttt 33829395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 232
Target Start/End: Complemental strand, 19924382 - 19924310
Alignment:
Q  160 taagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    |||||| ||||||||  |||||||||||||||| ||| ||||| ||||||||||||| |||| |||| |||||    
T  19924382 taagttgatgtatttggtacaaattttgaaccatatacattaacttttattgactaacttttacttacatttt 19924310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 129 - 236
Target Start/End: Complemental strand, 43398947 - 43398840
Alignment:
Q  129 gtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttata 228  Q
    |||| ||||| ||||||||| || ||||||| ||||||||||||||  | |||| |||| |||||||| || || || |||||||  |||||| |||| |    
T  43398947 gtcccaaaatctaaacaaaaatttgttaacaaaagttaatgtatttggttcaaaatttgtaccaaatacatcaacttatattgacccatttttacttaca 43398848  T
Q  229 ttttagaa 236  Q
    ||||||||    
T  43398847 ttttagaa 43398840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 35693992 - 35693934
Alignment:
Q  164 ttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttg 222  Q
    ||||||||||| |||| |||||| ||||||||| ||||| |||||||||| ||||||||    
T  35693992 ttaatgtatttgatactaattttaaaccaaatacattaatttttattgaccaatttttg 35693934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 232
Target Start/End: Original strand, 43398869 - 43398942
Alignment:
Q  159 ataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    ||||||| ||||||||  |||||||||||||||||||| ||||| |||| || || |||||||| ||| |||||    
T  43398869 ataagttgatgtatttggtacaaattttgaaccaaatacattaacttttgttaacaaatttttgtttagatttt 43398942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 17437166 - 17437230
Alignment:
Q  168 tgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    |||||||  |||||||||||||| ||||| ||||| |||| ||||| |||||||| |||||||||    
T  17437166 tgtatttggtacaaattttgaactaaatacattaatttttgttgacaaatttttgtttatatttt 17437230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 234
Target Start/End: Complemental strand, 24037696 - 24037588
Alignment:
Q  126 tccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgctt 225  Q
    ||||||||||||  ||| ||||| | |||  ||||||||| ||||||||  | |||| |||| ||||||||||| || || | |||||| ||||||||||    
T  24037696 tccgtcctaaaaagtaagcaaaaatgggtcgacataagttgatgtattttgttcaaaatttgtaccaaatatatcaacttatgttgactcatttttgctt 24037597  T
Q  226 atattttag 234  Q
    | |||||||    
T  24037596 acattttag 24037588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 232
Target Start/End: Original strand, 4224974 - 4225081
Alignment:
Q  125 ttccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgct 224  Q
    |||||| |||||||||||  |||| ||||| ||||||| || |||||| |  || |||||||||| ||||||   ||| |||| |||||||| ||||| |    
T  4224974 ttccgttctaaaatataagtaaaagttggtcaacataaattgatgtatctggtataaattttgaatcaaatacgataacttttgttgactaaattttgtt 4225073  T
Q  225 tatatttt 232  Q
    ||||||||    
T  4225074 tatatttt 4225081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 236
Target Start/End: Original strand, 41912075 - 41912186
Alignment:
Q  126 tccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattg-actaatttttgct 224  Q
    |||||||||||||| ||  |||| |  || ||||||||||||| ||  |  |||||||||||||||| ||| ||||| |||| ||| || | ||||||||    
T  41912075 tccgtcctaaaatacaagtaaaaataagtcaacataagttaatctagctggtacaaattttgaaccagatacattaatttttgttgaacaattttttgct 41912174  T
Q  225 tatattttagaa 236  Q
    ||||||||||||    
T  41912175 tatattttagaa 41912186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 17437238 - 17437168
Alignment:
Q  126 tccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaata 196  Q
    ||||||| ||||||||||||||| || || |||| || |||||||||||| | |||| |||| ||||||||    
T  17437238 tccgtcccaaaatataaacaaaaatttgtcaacaaaaattaatgtatttagttcaaaatttgtaccaaata 17437168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 38935475 - 38935369
Alignment:
Q  126 tccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgctt 225  Q
    ||||||| ||||||||||||||| ||  | |||| ||||||||||||||  | |||| | || | |||||| || || || | |||||| ||||||||||    
T  38935475 tccgtccaaaaatataaacaaaaattactcaacaaaagttaatgtattttgttcaaaatctgtatcaaatacatcaacttatgttgactcatttttgctt 38935376  T
Q  226 atatttt 232  Q
    |||||||    
T  38935375 atatttt 38935369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 2884254 - 2884350
Alignment:
Q  126 tccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttg 222  Q
    |||||||||||||||||  |||| || || |||| || |||||||||||  | |||| |||  | |||||||||||| || |||||||| |||||||    
T  2884254 tccgtcctaaaatataagtaaaaatttgtcaacaaaaattaatgtatttggttcaaaatttatatcaaatatattaaattatattgactcatttttg 2884350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 35311233 - 35311277
Alignment:
Q  177 tacaaattttgaaccaaatatattaagttttattgactaattttt 221  Q
    |||||||||||||||||||| ||||| |||| |||||||| ||||    
T  35311233 tacaaattttgaaccaaatacattaacttttgttgactaaatttt 35311277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 41374557 - 41374633
Alignment:
Q  156 aacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    |||| ||||| ||||||||  || ||| |||||| |||||| ||||| |||  ||||||||||||| ||||||||||    
T  41374557 aacacaagttgatgtatttggtataaactttgaatcaaatacattaactttcgttgactaatttttacttatatttt 41374633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 2e-23; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 126 - 234
Target Start/End: Original strand, 3739812 - 3739920
Alignment:
Q  126 tccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgctt 225  Q
    ||||||| ||||||||| ||||| ||||| |||  ||||||||||||||  |||||||||| ||||||||| ||||| |||| ||||| |||||||||||    
T  3739812 tccgtcccaaaatataagcaaaaattggtcaacgaaagttaatgtatttggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgctt 3739911  T
Q  226 atattttag 234  Q
    |||||||||    
T  3739912 atattttag 3739920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 127 - 232
Target Start/End: Complemental strand, 29855169 - 29855064
Alignment:
Q  127 ccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgctta 226  Q
    |||||||||||||||| ||||| ||| | |||| ||||||||||||||  |||||||||| ||||||||| || || |||| |||| ||||||| |||||    
T  29855169 ccgtcctaaaatataagcaaaaattgatcaacaaaagttaatgtatttcgtacaaatttttaaccaaatacatcaacttttgttgattaattttcgctta 29855070  T
Q  227 tatttt 232  Q
    ||||||    
T  29855069 tatttt 29855064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 3739926 - 3739820
Alignment:
Q  126 tccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgctt 225  Q
    ||||||||||||||||| ||||| ||||| |||| ||||||||||||||  |  ||| |||| |||||||| ||||| |||  ||||| |||||||||||    
T  3739926 tccgtcctaaaatataagcaaaaattggtcaacaaaagttaatgtatttggttaaaaatttgtaccaaatacattaactttcgttgaccaatttttgctt 3739827  T
Q  226 atatttt 232  Q
    |||||||    
T  3739826 atatttt 3739820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 5056322 - 5056398
Alignment:
Q  156 aacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    |||||||||| |||||||| |||||||||||||| ||||||  |||| |||||||||| |||||||| |||||||||    
T  5056322 aacataagttgatgtatttgatacaaattttgaatcaaatacgttaatttttattgaccaatttttgtttatatttt 5056398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 3694015 - 3694091
Alignment:
Q  156 aacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    ||||||| || ||||||||||||||||||||||| |||||| ||||| |||| ||||| ||||| | ||||||||||    
T  3694015 aacataaattgatgtatttaatacaaattttgaatcaaatacattaatttttgttgaccaatttctacttatatttt 3694091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 29846631 - 29846737
Alignment:
Q  126 tccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgctt 225  Q
    ||||| |||||||||||  |||||| ||| |||||||| | || |||| | || |||||||||||| |||| ||||| || ||||||| | |||||| ||    
T  29846631 tccgttctaaaatataagtaaaattgggtcaacataagctgatatattcagtataaattttgaaccgaatacattaatttatattgaccattttttgttt 29846730  T
Q  226 atatttt 232  Q
    |||||||    
T  29846731 atatttt 29846737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 233
Target Start/End: Complemental strand, 47543677 - 47543604
Alignment:
Q  160 taagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttta 233  Q
    |||||| ||||||||  |||||||||||||||||||  ||||| |||| ||||| |||||||  ||||||||||    
T  47543677 taagttgatgtatttggtacaaattttgaaccaaattcattaatttttgttgaccaattttttattatatttta 47543604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 156 - 224
Target Start/End: Original strand, 6061488 - 6061556
Alignment:
Q  156 aacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgct 224  Q
    ||||||||||||||||| || |||||||||| || |||||| ||||| |||| ||||| ||| ||||||    
T  6061488 aacataagttaatgtatctagtacaaattttaaaacaaatacattaatttttgttgaccaatatttgct 6061556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 196
Target Start/End: Original strand, 26265804 - 26265847
Alignment:
Q  153 gttaacataagttaatgtatttaatacaaattttgaaccaaata 196  Q
    ||||||||||||| ||||||||| || |||||||||||||||||    
T  26265804 gttaacataagttgatgtatttagtataaattttgaaccaaata 26265847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 31784844 - 31784777
Alignment:
Q  129 gtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaata 196  Q
    |||| ||||| ||| ||||| || || |||||||||| |||||| ||||||||||||||||| |||||    
T  31784844 gtcccaaaatgtaagcaaaaatttgtcaacataagttgatgtatctaatacaaattttgaacaaaata 31784777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 155 - 221
Target Start/End: Complemental strand, 15343305 - 15343239
Alignment:
Q  155 taacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaattttt 221  Q
    ||||||||||| ||||||||||||||| |||| || ||||| |||| | |||| ||||| |||||||    
T  15343305 taacataagttgatgtatttaatacaattttttaatcaaatttattgacttttgttgaccaattttt 15343239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 155 - 233
Target Start/End: Original strand, 19758298 - 19758376
Alignment:
Q  155 taacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttta 233  Q
    |||| |||||| ||||||||  |||||||| | ||| ||||| ||||| |||| ||||| ||||||| |||||||||||    
T  19758298 taacgtaagttgatgtatttggtacaaattataaactaaatacattaacttttgttgaccaatttttacttatatttta 19758376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 27357833 - 27357881
Alignment:
Q  159 ataagttaatgtatttaatacaaattttgaaccaaatatattaagtttt 207  Q
    ||||||||||| ||||| |||||||| |||| |||||| ||||||||||    
T  27357833 ataagttaatgaatttagtacaaattctgaatcaaatacattaagtttt 27357881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 7e-23; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 8777853 - 8777774
Alignment:
Q  154 ttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttta 233  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||  |||||||| ||||||||||    
T  8777853 ttaacataagttaatgtatttaatataaattttgaaccaaatatattaacttttgttgatcaatttttgtttatatttta 8777774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 9548077 - 9548154
Alignment:
Q  156 aacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttta 233  Q
    |||||||||| ||||||||| |||||||||||||||||||||| ||| |||| ||||  |||||||| ||||||||||    
T  9548077 aacataagttgatgtatttagtacaaattttgaaccaaatataataatttttgttgaacaatttttgtttatatttta 9548154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 156 - 234
Target Start/End: Original strand, 33557803 - 33557881
Alignment:
Q  156 aacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatattttag 234  Q
    |||||||||| |||||||| ||||||||||||||| ||||| ||||| |||||||||  ||||||| ||||| ||||||    
T  33557803 aacataagtttatgtatttgatacaaattttgaactaaatacattaacttttattgatcaatttttacttatgttttag 33557881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 134 - 234
Target Start/End: Original strand, 35901041 - 35901141
Alignment:
Q  134 aaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttta 233  Q
    ||||||||| ||||| |  || |||||||||| ||||| ||| |||||||||||| || |||| ||||| |||| |||||  ||||||||||||||||||    
T  35901041 aaaatataagcaaaaatgagtcaacataagttgatgtaattagtacaaattttgagcccaatacattaacttttgttgacctatttttgcttatatttta 35901140  T
Q  234 g 234  Q
    |    
T  35901141 g 35901141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 156 - 225
Target Start/End: Complemental strand, 13210046 - 13209977
Alignment:
Q  156 aacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgctt 225  Q
    |||||||||| |||||| | ||||||||||||||||||||| ||||| |||| ||||  |||||||||||    
T  13210046 aacataagttgatgtatctgatacaaattttgaaccaaatacattaacttttgttgatcaatttttgctt 13209977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 233
Target Start/End: Complemental strand, 8637288 - 8637234
Alignment:
Q  179 caaattttgaaccaaatatattaagttttattgactaatttttgcttatatttta 233  Q
    ||||||||||||||||||||| || |||| |||||||| | ||||||||||||||    
T  8637288 caaattttgaaccaaatatatcaattttttttgactaactattgcttatatttta 8637234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 37627935 - 37628013
Alignment:
Q  153 gttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    ||||| ||||||| |||||||| |||||||||||||| |||| ||||||| |||| || |  |||||||| |||||||||    
T  37627935 gttaatataagttgatgtatttgatacaaattttgaatcaaa-atattaacttttgttaataaatttttgtttatatttt 37628013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 7974792 - 7974890
Alignment:
Q  134 aaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    |||||||||| || | | ||| ||||||| || | ||||||  ||||||||||||   ||||| ||||| |||||||||| |||||||| |||||||||    
T  7974792 aaaatataaaaaagaatgggtcaacataaattgacgtatttggtacaaattttgacaaaaatacattaacttttattgaccaatttttgtttatatttt 7974890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 166 - 232
Target Start/End: Original strand, 29110997 - 29111063
Alignment:
Q  166 aatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    |||||||||  || ||||||||||||||||| |||||||||  ||||  |||||||| |||||||||    
T  29110997 aatgtatttggtataaattttgaaccaaatacattaagtttcgttgatcaatttttgtttatatttt 29111063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 9294566 - 9294631
Alignment:
Q  134 aaaatataaacaaaatttggt-taacataagttaatgtatttaatacaaattttgaaccaaatata 198  Q
    ||||||||||||||| | | | |||||| |||| ||||||||| |||||||||||||| |||||||    
T  9294566 aaaatataaacaaaaatagatctaacattagttgatgtatttagtacaaattttgaactaaatata 9294631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 11196249 - 11196301
Alignment:
Q  160 taagttaatgtatttaatacaaattttgaaccaaatatattaagttttattga 212  Q
    |||||| |||||||||||||||||||||||  ||||| ||||| |||| ||||    
T  11196249 taagttgatgtatttaatacaaattttgaattaaatacattaatttttgttga 11196301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 2e-17; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 32221468 - 32221574
Alignment:
Q  126 tccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgctt 225  Q
    ||||||| ||||| ||| ||||| ||| | | ||||| || ||||||||  |||||||||||||||||||| ||||| |||| |||||||||||||||||    
T  32221468 tccgtcccaaaatgtaagcaaaaattgatcagcataaattgatgtatttggtacaaattttgaaccaaatacattaacttttgttgactaatttttgctt 32221567  T
Q  226 atatttt 232  Q
    | |||||    
T  32221568 acatttt 32221574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 31280237 - 31280158
Alignment:
Q  156 aacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatattttaga 235  Q
    ||||||| ||||||||| |  |||||||||||||||||||| ||||| |||| ||||  ||||||| |||||||||||||    
T  31280237 aacataaattaatgtatatggtacaaattttgaaccaaatacattaaattttgttgatcaatttttacttatattttaga 31280158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 125 - 202
Target Start/End: Complemental strand, 45610547 - 45610470
Alignment:
Q  125 ttccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaa 202  Q
    |||||||  ||||| |||||||||||| ||||||||||||| ||| |||| ||| |||| |||||||||||| |||||    
T  45610547 ttccgtctcaaaatgtaaacaaaatttagttaacataagttgatgaatttgatataaatcttgaaccaaatacattaa 45610470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 40905860 - 40905804
Alignment:
Q  180 aaattttgaaccaaatatattaagttttattgactaatttttgcttatattttagaa 236  Q
    ||||||||||||||||| ||||| |||| ||||| |||||||||||| |||||||||    
T  40905860 aaattttgaaccaaataaattaacttttgttgaccaatttttgcttacattttagaa 40905804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 128 - 234
Target Start/End: Complemental strand, 46829152 - 46829053
Alignment:
Q  128 cgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttat 227  Q
    ||||||||||||||| ||||| ||||| |||| |||||||||||||| ||  ||||     |||||||| ||| | |||| ||||| |||||||||||||    
T  46829152 cgtcctaaaatataagcaaaaattggtcaacaaaagttaatgtatttgat--aaat-----accaaatacattgacttttgttgaccaatttttgcttat 46829060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 47783182 - 47783079
Alignment:
Q  134 aaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttta 233  Q
    ||||||||| ||||| |  || ||||||||   |||||| | ||||||||||||||||||||| ||||| |||| ||||| ||||||| |||| |||||     
T  47783182 aaaatataagcaaaaatgagtcaacataagccgatgtatctgatacaaattttgaaccaaatacattaactttttttgaccaatttttacttacattttg 47783083  T
Q  234 gaat 237  Q
    ||||    
T  47783082 gaat 47783079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 26439387 - 26439323
Alignment:
Q  167 atgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    |||||||| |||||||||||||| |||||| ||||| |||| ||| ||||| ||||||||||||||    
T  26439387 atgtatttgatacaaattttgaatcaaatacattaa-tttttttggctaatatttgcttatatttt 26439323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 230
Target Start/End: Complemental strand, 40955863 - 40955786
Alignment:
Q  153 gttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatt 230  Q
    ||||| |||||||||||||| | ||||||||||||||| ||||| | ||| |||||||||  |||||||  |||||||    
T  40955863 gttaaaataagttaatgtatatgatacaaattttgaactaaatacaataatttttattgatcaattttttgttatatt 40955786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 160 - 232
Target Start/End: Original strand, 26914481 - 26914553
Alignment:
Q  160 taagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    |||||| ||||||||| || ||||||||||||| ||| ||||| |||| ||||  |||||||||||| |||||    
T  26914481 taagttgatgtatttagtataaattttgaaccacatacattaatttttgttgatcaatttttgcttacatttt 26914553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 29637461 - 29637537
Alignment:
Q  156 aacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    ||||||| ||||| ||||| |||||||||||||||||||||   ||| || | ||||||||||| | ||||||||||    
T  29637461 aacataaattaatatatttgatacaaattttgaaccaaatactgtaatttatgttgactaatttctacttatatttt 29637537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 123 - 234
Target Start/End: Original strand, 46829044 - 46829148
Alignment:
Q  123 tattccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttg 222  Q
    |||||||||||||||||||| ||||| ||||| |||| |||| |||||||||  |    ||||   | |||||| ||||| |||| ||||| ||||||||    
T  46829044 tattccgtcctaaaatataagcaaaaattggtcaacaaaagtcaatgtatttggt----attt---atcaaatacattaacttttgttgaccaatttttg 46829136  T
Q  223 cttatattttag 234  Q
    ||||||||||||    
T  46829137 cttatattttag 46829148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 224
Target Start/End: Complemental strand, 5307408 - 5307341
Alignment:
Q  157 acataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgct 224  Q
    ||||| ||| |||||| ||||||||||||| ||| ||||  ||||| |||||||||| ||||||||||    
T  5307408 acatacgttgatgtatctaatacaaattttaaacgaaatccattaatttttattgaccaatttttgct 5307341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 127 - 207
Target Start/End: Original strand, 15282638 - 15282718
Alignment:
Q  127 ccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagtttt 207  Q
    |||||| ||||||||||||||| | | | |||||||||| ||| || | ||||||||||| || |||||| ||||| ||||    
T  15282638 ccgtcccaaaatataaacaaaaatggatcaacataagttgatgaatctgatacaaattttaaatcaaatacattaactttt 15282718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 134 - 230
Target Start/End: Complemental strand, 30807035 - 30806939
Alignment:
Q  134 aaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatt 230  Q
    ||||||||| ||||| | ||| ||||||||||  ||| |   |||||||||||| ||||| || ||||| |||||||||  ||||||| ||||||||    
T  30807035 aaaatataagcaaaaatgggtcaacataagttggtgtgtgcgatacaaattttggaccaagtacattaatttttattgatcaattttttcttatatt 30806939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 130 - 186
Target Start/End: Original strand, 32729504 - 32729560
Alignment:
Q  130 tcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaatttt 186  Q
    ||||||||||||| ||||| |  |||||||||| || || |||||||||||||||||    
T  32729504 tcctaaaatataagcaaaaataagttaacataaattgatctatttaatacaaatttt 32729560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2113 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold2113
Description:

Target: scaffold2113; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 575 - 680
Alignment:
Q  126 tccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgctt 225  Q
    ||||||| ||| ||||| ||||||||||| |||| |||||||| |||||  |||||||||||||| ||||| | ||| |||| ||||||||||||  |||    
T  575 tccgtcccaaagtataagcaaaatttggt-aacaaaagttaatttatttggtacaaattttgaactaaatacaataacttttgttgactaattttcactt 673  T
Q  226 atatttt 232  Q
    |||||||    
T  674 atatttt 680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 20390 - 20467
Alignment:
Q  156 aacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttta 233  Q
    ||||||| ||||||||||||||||||||||| ||||| |||  |||| ||||| |||| |||||||||||| ||||||    
T  20390 aacataaattaatgtatttaatacaaattttaaaccacatacgttaatttttactgaccaatttttgcttacatttta 20467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 12276924 - 12276824
Alignment:
Q  134 aaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttta 233  Q
    ||||||||| ||||| | ||| |||||||||| ||||||||| || |||||||||| |||||| ||||| ||||  |||| ||| ||| |||||||||||    
T  12276924 aaaatataagcaaaaataggtcaacataagttgatgtatttagtataaattttgaatcaaatacattaacttttgctgaccaatctttacttatatttta 12276825  T
Q  234 g 234  Q
    |    
T  12276824 g 12276824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 1083872 - 1083797
Alignment:
Q  126 tccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatatta 201  Q
    |||||||||||||||||  |||| | | ||||||||| || || |||||||||||||||||||| |||||||||||    
T  1083872 tccgtcctaaaatataagtaaaaatagattaacataaatttatatatttaatacaaattttgaatcaaatatatta 1083797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 30848618 - 30848700
Alignment:
Q  156 aacataagttaatgtatttaat--acaaattttgaaccaaatatattaagttttattgactaatttttgcttatattttagaa 236  Q
    |||||||||| |||||| ||||  ||||||||||||| ||||| ||||| |||| ||||| |||||||||||| |||||||||    
T  30848618 aacataagttgatgtatctaatgtacaaattttgaacaaaatacattaatttttgttgaccaatttttgcttacattttagaa 30848700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 237
Target Start/End: Original strand, 54235261 - 54235331
Alignment:
Q  167 atgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatattttagaat 237  Q
    ||||||||| |||||||||||||||||||| ||||| |||| ||||  |||||||| |||||||| |||||    
T  54235261 atgtatttagtacaaattttgaaccaaatacattaacttttgttgagcaatttttgtttatatttaagaat 54235331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 159 - 232
Target Start/End: Complemental strand, 4423228 - 4423155
Alignment:
Q  159 ataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    ||||||| ||||||||  ||||||||||||| |||||||||||| |||||||||  ||||||  ||||||||||    
T  4423228 ataagttgatgtatttggtacaaattttgaatcaaatatattaatttttattgatcaattttcacttatatttt 4423155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 18995180 - 18995240
Alignment:
Q  177 tacaaattttgaaccaaatatattaagttttattgactaatttttgcttatattttagaat 237  Q
    |||||||||||||||||||| ||||| ||||||| |||||| |||||||| ||||| ||||    
T  18995180 tacaaattttgaaccaaatacattaacttttattaactaatgtttgcttacattttggaat 18995240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 55827290 - 55827345
Alignment:
Q  177 tacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    |||||| ||| ||||||||||||||| |||| ||||| ||||||||||||||||||    
T  55827290 tacaaaattttaaccaaatatattaacttttgttgaccaatttttgcttatatttt 55827345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 232
Target Start/End: Complemental strand, 54235325 - 54235228
Alignment:
Q  135 aaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    |||||||||||||| ||| | |||| ||||||||||||||  | |||| |||| || ||||| || || || |||||||| ||||||||||| |||||    
T  54235325 aaatataaacaaaaattgctcaacaaaagttaatgtatttggttcaaaatttgtactaaatacatcaatttatattgactcatttttgcttacatttt 54235228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 156 - 232
Target Start/End: Original strand, 24980653 - 24980729
Alignment:
Q  156 aacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    |||||||||| |||||| | | |||||||||| || ||||| ||||| |||| ||||| |||||||||||| |||||    
T  24980653 aacataagttgatgtatctgacacaaattttgtacaaaatacattaatttttgttgacaaatttttgcttacatttt 24980729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 230
Target Start/End: Original strand, 48514542 - 48514637
Alignment:
Q  134 aaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatt 230  Q
    |||||||||  |||| | |||||||| ||||  ||||||| |||| || ||||| |||||||| ||||| |||| |||||||||||||| |||||||    
T  48514542 aaaatataagtaaaaatgggttaacacaagtagatgtatt-aataaaatttttggaccaaatacattaacttttgttgactaatttttgtttatatt 48514637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 55762913 - 55762968
Alignment:
Q  177 tacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    |||||||||| || |||||||||||| |||| ||||| |||||||| |||||||||    
T  55762913 tacaaatttttaatcaaatatattaacttttgttgaccaatttttgtttatatttt 55762968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 151 - 221
Target Start/End: Original strand, 4479599 - 4479669
Alignment:
Q  151 tggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaattttt 221  Q
    ||||||| |||||||||||||| |  || |||||||||| |||||||||||| |||| ||||  |||||||    
T  4479599 tggttaatataagttaatgtatctggtataaattttgaatcaaatatattaatttttgttgatcaattttt 4479669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 55762976 - 55762928
Alignment:
Q  126 tccgtcctaaaatataaacaaaatttggttaacataagttaatgtattt 174  Q
    ||||||| ||||||||||||||| ||||| |||| |||||||| |||||    
T  55762976 tccgtcccaaaatataaacaaaaattggtcaacaaaagttaatatattt 55762928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 125 - 232
Target Start/End: Complemental strand, 95059 - 94952
Alignment:
Q  125 ttccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgct 224  Q
    ||||||| |||||| |||  |||| ||||| |||||||||| ||||||||  ||||||||||||||  |||| ||||| |||||||||  |||||| |||    
T  95059 ttccgtcttaaaatgtaataaaaaattggtcaacataagttgatgtatttggtacaaattttgaacataatacattaatttttattgatcaattttcgct 94960  T
Q  225 tatatttt 232  Q
    || |||||    
T  94959 tacatttt 94952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 31323923 - 31323820
Alignment:
Q  129 gtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttata 228  Q
    |||| ||||| ||| ||||| | ||| |||||||||| |||||| |  |||||||||||||| ||||| ||||| |||| ||||| |||||||||||| |    
T  31323923 gtcccaaaatgtaagcaaaaataggtcaacataagttgatgtatctggtacaaattttgaacaaaatacattaacttttgttgaccaatttttgcttaca 31323824  T
Q  229 tttt 232  Q
    ||||    
T  31323823 tttt 31323820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 222
Target Start/End: Complemental strand, 8211865 - 8211799
Alignment:
Q  156 aacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttg 222  Q
    ||||||| |||||||||||| ||||||||| | |||||||||||||| |||||||||  ||||||||    
T  8211865 aacataaattaatgtatttagtacaaatttcggaccaaatatattaaattttattgatcaatttttg 8211799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 138 - 232
Target Start/End: Original strand, 28004633 - 28004727
Alignment:
Q  138 tataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    ||||| || |||||||  |||| || |||||||||||  |||||||||||| ||||||| ||||| |||| ||||||||||||  ||||||||||    
T  28004633 tataagcataatttggccaacaaaaattaatgtatttggtacaaattttgagccaaatacattaacttttgttgactaattttcccttatatttt 28004727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 234
Target Start/End: Complemental strand, 35003841 - 35003763
Alignment:
Q  156 aacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatattttag 234  Q
    |||||||||| || |||||  ||||||||||||| |||||| ||||| ||||||| || ||||||| ||||||||||||    
T  35003841 aacataagttgatatattttgtacaaattttgaatcaaatacattaatttttattaaccaatttttacttatattttag 35003763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 233
Target Start/End: Original strand, 35003756 - 35003864
Alignment:
Q  125 ttccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgct 224  Q
    ||||||||||||||||||  |||| |||||||| | || ||||||||||| || |||| |||| || |||||||| || || | |||| | |||||||||    
T  35003756 ttccgtcctaaaatataagtaaaaattggttaataaaaattaatgtatttgattcaaaatttgtacaaaatatatcaacttatgttgattcatttttgct 35003855  T
Q  225 tatatttta 233  Q
    || ||||||    
T  35003856 tacatttta 35003864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 156 - 231
Target Start/End: Complemental strand, 9829973 - 9829898
Alignment:
Q  156 aacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatattt 231  Q
    ||||||| || ||||||||  |||||||||| ||| ||||| ||||| |||| ||||||||||||| |||||||||    
T  9829973 aacataaattgatgtatttggtacaaattttaaacaaaatacattaatttttgttgactaatttttacttatattt 9829898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 234
Target Start/End: Complemental strand, 1986314 - 1986208
Alignment:
Q  128 cgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttat 227  Q
    ||||||||||| |||| |||| |  || ||||||||||||| |||||  || ||||||| ||| ||||  ||||| |||||||||| || |||| |||||    
T  1986314 cgtcctaaaatgtaaataaaaatcagtcaacataagttaatatatttggtataaattttaaactaaatgcattaatttttattgaccaacttttacttat 1986215  T
Q  228 attttag 234  Q
    |||||||    
T  1986214 attttag 1986208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 232
Target Start/End: Original strand, 8437813 - 8437878
Alignment:
Q  167 atgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    ||||||||  ||||||||||||| |||||| ||||| |||| |||||||| |||| ||||||||||    
T  8437813 atgtatttggtacaaattttgaatcaaatacattaatttttgttgactaaattttacttatatttt 8437878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 33822372 - 33822319
Alignment:
Q  154 ttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagtttt 207  Q
    |||| ||||||| |||||||| ||||||||||||||| ||||||||||| ||||    
T  33822372 ttaatataagttgatgtatttgatacaaattttgaactaaatatattaactttt 33822319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 134 - 236
Target Start/End: Complemental strand, 13422236 - 13422134
Alignment:
Q  134 aaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttta 233  Q
    ||||| |||| |||| | ||||||||||| ||||| ||| |  || ||||||| || |||||| ||||| |||||||||  ||||||| |||| ||||||    
T  13422236 aaaatgtaaataaaaataggttaacataaattaatatatctggtataaattttaaatcaaatacattaatttttattgagcaatttttacttacatttta 13422137  T
Q  234 gaa 236  Q
    |||    
T  13422136 gaa 13422134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 14446808 - 14446702
Alignment:
Q  126 tccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgctt 225  Q
    ||||||| ||||| |||  |||| ||||| ||  |||||| |||||| ||||| ||||||||||| | ||| ||||| |||| ||||| || ||||||||    
T  14446808 tccgtcccaaaatgtaagtaaaaattggtcaatgtaagttgatgtatctaatataaattttgaacaacatacattaacttttgttgaccaacttttgctt 14446709  T
Q  226 atatttt 232  Q
    | |||||    
T  14446708 acatttt 14446702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 26395283 - 26395357
Alignment:
Q  156 aacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatt 230  Q
    ||||||| ||||||||||| |||| || ||||||  ||| | ||||| ||||||||||||| |||| ||||||||    
T  26395283 aacataaattaatgtattttatacgaactttgaattaaacacattaatttttattgactaaattttacttatatt 26395357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 182 - 232
Target Start/End: Complemental strand, 28596131 - 28596081
Alignment:
Q  182 attttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    ||||||||||||||||||||| |||| ||||| ||||||| |||| |||||    
T  28596131 attttgaaccaaatatattaatttttgttgaccaatttttacttacatttt 28596081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.000000000001; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 232
Target Start/End: Complemental strand, 5026220 - 5026146
Alignment:
Q  158 cataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    |||||||| ||||||||  ||||||||||| || ||||||||||| |||| || || ||||||||||||||||||    
T  5026220 cataagttgatgtatttggtacaaattttggactaaatatattaacttttgttaaccaatttttgcttatatttt 5026146  T

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Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 228
Target Start/End: Original strand, 16866407 - 16866501
Alignment:
Q  134 aaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttata 228  Q
    ||||||||| ||||| ||| | || | |||||||||||||   |||||||||| ||||||||| ||||| |||| ||||| ||||||||||||||    
T  16866407 aaaatataagcaaaaattgatcaataaaagttaatgtattaggtacaaatttttaaccaaatacattaacttttgttgaccaatttttgcttata 16866501  T

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Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 234
Target Start/End: Complemental strand, 30794523 - 30794445
Alignment:
Q  156 aacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatattttag 234  Q
    ||||||| | |||||||||  ||||||||||||| |||||||||||| |||| ||||| || |||| ||||||||||||    
T  30794523 aacataaatgaatgtatttggtacaaattttgaatcaaatatattaaattttgttgaccaaattttacttatattttag 30794445  T

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Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 159 - 236
Target Start/End: Original strand, 23971216 - 23971292
Alignment:
Q  159 ataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatattttagaa 236  Q
    ||||||| ||||||||  |||||||||||||| ||||||||| | |||| ||||| ||||||| ||||||||||||||    
T  23971216 ataagttgatgtatttggtacaaattttgaactaaatatatttatttttgttgaccaattttt-cttatattttagaa 23971292  T

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Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 232
Target Start/End: Complemental strand, 16866501 - 16866407
Alignment:
Q  138 tataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    ||||| ||||| ||||| |||| ||||||||||||||  |  ||| |||| ||| |||| ||||| |||||||||  ||||||||||||||||||    
T  16866501 tataagcaaaaattggtcaacaaaagttaatgtatttggttaaaaatttgtacctaatacattaacttttattgatcaatttttgcttatatttt 16866407  T

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Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 234
Target Start/End: Original strand, 18731990 - 18732095
Alignment:
Q  128 cgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttat 227  Q
    ||||| ||||||||| ||||| | | | ||||||| || |||||| |  || ||||||||||||||||| ||||| |||||||||| ||||||| ||||     
T  18731990 cgtcccaaaatataagcaaaaatggatcaacataaattgatgtatctggtataaattttgaaccaaatacattaacttttattgaccaattttt-cttac 18732088  T
Q  228 attttag 234  Q
    |||||||    
T  18732089 attttag 18732095  T

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Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 156 - 232
Target Start/End: Complemental strand, 47967995 - 47967919
Alignment:
Q  156 aacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    |||||||||||||||||||| |||||||||| ||| ||||| || || |||| |||||  | ||||| |||||||||    
T  47967995 aacataagttaatgtatttagtacaaattttaaactaaatacataaatttttgttgaccgaattttgtttatatttt 47967919  T

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Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 4259334 - 4259408
Alignment:
Q  156 aacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttatt-gactaatttttgcttatatt 230  Q
    |||||||||||||||||||| || |||||||||| |||||| ||||| |||| || ||  ||||||||||||||||    
T  4259334 aacataagttaatgtatttactataaattttgaa-caaatacattaacttttgttagatcaatttttgcttatatt 4259408  T

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Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 6803308 - 6803375
Alignment:
Q  129 gtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaata 196  Q
    |||| ||||||||| ||||||||||| |||| ||||||||||||||| |  ||| |||| ||||||||    
T  6803308 gtcccaaaatataagcaaaatttggtcaacaaaagttaatgtatttagtttaaaatttgtaccaaata 6803375  T

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Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 197
Target Start/End: Original strand, 27147595 - 27147666
Alignment:
Q  126 tccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatat 197  Q
    ||||| |||||||||||  |||| || || |||| |||||||||||||| ||||||||||| ||| ||||||    
T  27147595 tccgttctaaaatataagtaaaaattagtcaacaaaagttaatgtatttgatacaaattttaaactaaatat 27147666  T

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Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 27147644 - 27147599
Alignment:
Q  191 caaatatattaagttttattgactaatttttgcttatattttagaa 236  Q
    |||||| ||||| |||| ||||||||||||| ||||||||||||||    
T  27147644 caaatacattaacttttgttgactaatttttacttatattttagaa 27147599  T

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Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 232
Target Start/End: Complemental strand, 44816538 - 44816473
Alignment:
Q  167 atgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatatttt 232  Q
    ||||||||  |||||||||||||||||||| ||||| |||| ||| | |||||||| ||| |||||    
T  44816538 atgtatttggtacaaattttgaaccaaatacattaacttttgttggccaatttttgtttacatttt 44816473  T

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Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 34515855 - 34515903
Alignment:
Q  178 acaaattttgaaccaaatatattaagttttattgactaatttttgctta 226  Q
    ||||||||||||| ||||| ||||| |||||||||| || |||||||||    
T  34515855 acaaattttgaacaaaatacattaacttttattgaccaaattttgctta 34515903  T

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Target: scaffold0097 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 221
Target Start/End: Complemental strand, 38023 - 37928
Alignment:
Q  126 tccgtcctaaaatataaacaaaatttggttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaattttt 221  Q
    ||||||||||||| |||||||||    || || |||| || ||||||||  || ||||||| ||||||||| ||||| |||| |||||||||||||    
T  38023 tccgtcctaaaatgtaaacaaaaacgagtcaatataaattgatgtatttggtataaattttaaaccaaatacattaacttttgttgactaattttt 37928  T

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Target: scaffold0236 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 167 - 229
Target Start/End: Complemental strand, 14605 - 14543
Alignment:
Q  167 atgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatat 229  Q
    |||||||||||| ||||||| || |||||| ||||| ||| ||||| ||||||||| ||||||    
T  14605 atgtatttaatataaattttaaatcaaatacattaactttgattgattaatttttgtttatat 14543  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 13259 - 13175
Alignment:
Q  153 gttaacataagttaatgtatttaatacaaattttgaaccaaatatattaagttttattgactaatttttgcttatattttagaat 237  Q
    ||||| ||||||| |||||| |  |||||||||| ||||||||| ||||| |||| ||||   ||||||||||| ||||| ||||    
T  13259 gttaatataagttgatgtatcttgtacaaattttaaaccaaatacattaacttttgttgatccatttttgcttacattttggaat 13175  T

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