View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3491_low_5 (Length: 236)
Name: NF3491_low_5
Description: NF3491
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3491_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 32843315 - 32843534
Alignment:
| Q |
1 |
tccatggaatagggctcccctctagaatagtagataaatctctccatggaataggtcgcccctccagaacaggagagctttctctccatggaactaggag |
100 |
Q |
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| T |
32843315 |
tccatggaatagggctcccctccagaatagtagataaatctctccatggaataggtcgcccctccagaacatgagagatttctctccatggaactaggag |
32843414 |
T |
|
| Q |
101 |
atttgtgcccgaggtcccaacccgggtagactccataagataataagtgtctatgcccaataaggaaaagatatccaatgacagtatataaatgaacatc |
200 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32843415 |
atttgtgcctgaggtcccaacccgggtagactccataagataacaagtgtctatgcccaataaggaaaagatatccaatgacagtatataaatgaacatc |
32843514 |
T |
|
| Q |
201 |
gggatgatgatagtgatttc |
220 |
Q |
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|||||||||||||||||||| |
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| T |
32843515 |
gggatgatgatagtgatttc |
32843534 |
T |
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