View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3492_high_28 (Length: 297)
Name: NF3492_high_28
Description: NF3492
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3492_high_28 |
 |  |
|
| [»] scaffold0017 (2 HSPs) |
 |  |  |
|
| [»] scaffold0061 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr5 (Bit Score: 255; Significance: 1e-142; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 4 - 278
Target Start/End: Complemental strand, 29508409 - 29508135
Alignment:
| Q |
4 |
aagagaaggagagaaatgcactcctcaaattcaaagaaggccttcaagatgagtatggcatgttgtccacatggaaggacgacccaaatgaagattgctg |
103 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29508409 |
aagagaaggagagaaatgcactcctcaaattcaaagaaggccttcaagatgagtatggcatgttgtccacatggaaggacgacccaaatgaagattgctg |
29508310 |
T |
 |
| Q |
104 |
caaatggaagggagttcgatgcaacaatcaaacaggttatgttcaaagacttgatctgcatggttcatttacatgccatttgagtggtgaaattagtcct |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |
|
|
| T |
29508309 |
caaatggaagggagttcgatgcaacaatcaaacaggttatgttcaaagacttgatctgcatggttcgtttacatgcaatttgagtggtgaaattagtcct |
29508210 |
T |
 |
| Q |
204 |
tcaataattcagcttggaaatctctcacaattgcaacaccttgatctcggtggaaatgaactcattggagcaatt |
278 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||| |
|
|
| T |
29508209 |
tcaataattcagcttggaaatctctcacaattgcaacaccttgatctcagaggtaatgaactcattggagcaatt |
29508135 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 216 - 278
Target Start/End: Complemental strand, 29507981 - 29507919
Alignment:
| Q |
216 |
cttggaaatctctcacaattgcaacaccttgatctcggtggaaatgaactcattggagcaatt |
278 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
29507981 |
cttggaaatctctcacaattgcaacaccttgatctcggcggaaatgaactcattggagcaatt |
29507919 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 216 - 278
Target Start/End: Complemental strand, 29507909 - 29507847
Alignment:
| Q |
216 |
cttggaaatctctcacaattgcaacaccttgatctcggtggaaatgaactcattggagcaatt |
278 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
29507909 |
cttggaaatctctcacaattgcaacaccttgatctcggcgaaaatgaactcattggagcaatt |
29507847 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 216 - 278
Target Start/End: Complemental strand, 29508125 - 29508063
Alignment:
| Q |
216 |
cttggaaatctctcacaattgcaacaccttgatctcggtggaaatgaactcattggagcaatt |
278 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
29508125 |
cttggaaatctctcacaattgcaacaccttgatctcggcgaaaatgaactcattggagcaatt |
29508063 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 216 - 278
Target Start/End: Complemental strand, 29507693 - 29507631
Alignment:
| Q |
216 |
cttggaaatctctcacaattgcaacaccttgatctcggtggaaatgaactcattggagcaatt |
278 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||| |
|
|
| T |
29507693 |
cttggaaatctctcacaattgcaacaccttgatctcagcgaaaatgaactcattggagcaatt |
29507631 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 216 - 278
Target Start/End: Complemental strand, 29507765 - 29507703
Alignment:
| Q |
216 |
cttggaaatctctcacaattgcaacaccttgatctcggtggaaatgaactcattggagcaatt |
278 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
29507765 |
cttggaaatctctcacaattgcaacaccttgatctcagcagaaatgaactcattggagcaatt |
29507703 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 278
Target Start/End: Complemental strand, 29507837 - 29507775
Alignment:
| Q |
216 |
cttggaaatctctcacaattgcaacaccttgatctcggtggaaatgaactcattggagcaatt |
278 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| | |||||||||||||||| |||| |
|
|
| T |
29507837 |
cttggaaatctctcacaattgcaacatcttgatctcagctacaatgaactcattggaggaatt |
29507775 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 216 - 278
Target Start/End: Complemental strand, 29508053 - 29507991
Alignment:
| Q |
216 |
cttggaaatctctcacaattgcaacaccttgatctcggtggaaatgaactcattggagcaatt |
278 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| | |||||||||||||||| |||| |
|
|
| T |
29508053 |
cttggaaatctctcacaattgcaacatcttgatctcagctacaatgaactcattggaggaatt |
29507991 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 277
Target Start/End: Complemental strand, 29507621 - 29507560
Alignment:
| Q |
216 |
cttggaaatctctcacaattgcaacaccttgatctcggtggaaatgaactcattggagcaat |
277 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||| | |||||||| ||||||||||| |
|
|
| T |
29507621 |
cttggaaatctctcacaattacaacaccttgatctcagctacaatgaactaattggagcaat |
29507560 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 102; Significance: 1e-50; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 3 - 168
Target Start/End: Original strand, 26727228 - 26727393
Alignment:
| Q |
3 |
aaagagaaggagagaaatgcactcctcaaattcaaagaaggccttcaagatgagtatggcatgttgtccacatggaaggacgacccaaatgaagattgct |
102 |
Q |
| |
|
||||||| ||||||| |||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||| || | ||||| |||||||| |
|
|
| T |
26727228 |
aaagagagggagagacatgcactcctcacattcaaacaaggccttcaagatgagtatggcattttgtccacatggaaggatgatcaaaatgcagattgct |
26727327 |
T |
 |
| Q |
103 |
gcaaatggaagggagttcgatgcaacaatcaaacaggttatgttcaaagacttgatctgcatggtt |
168 |
Q |
| |
|
||||||||| |||||| ||||||||| |||||||||||||||||||||||||| ||||||||| |
|
|
| T |
26727328 |
gcaaatggatgggagtcttatgcaacaacgaaacaggttatgttcaaagacttgatttgcatggtt |
26727393 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 3 - 160
Target Start/End: Original strand, 8341629 - 8341786
Alignment:
| Q |
3 |
aaagagaaggagagaaatgcactcctcaaattcaaagaaggccttcaagatgagtatggcatgttgtccacatggaaggacgacccaaatgaagattgct |
102 |
Q |
| |
|
||||||| ||||||| | |||||||||| |||||| ||||| ||| |||||| ||||||||||||||| |||||||||||| |||| || |||||||| |
|
|
| T |
8341629 |
aaagagagggagagacacgcactcctcacgttcaaacaaggcgttcgagatgattatggcatgttgtccgcatggaaggacggtccaactgcagattgct |
8341728 |
T |
 |
| Q |
103 |
gcaaatggaagggagttcgatgcaacaatcaaacaggttatgttcaaagacttgatct |
160 |
Q |
| |
|
|||||||||| ||| ||| ||||||||||||||| ||||||||| ||| |||||||| |
|
|
| T |
8341729 |
gcaaatggaaaggaattcaatgcaacaatcaaaccggttatgttgaaaagcttgatct |
8341786 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 26727567 - 26727624
Alignment:
| Q |
216 |
cttggaaatctctcacaattgcaacaccttgatctcggtggaaatgaactcattggag |
273 |
Q |
| |
|
|||||||| |||||||| |||||||||||||||||| | |||||||||||||||| |
|
|
| T |
26727567 |
cttggaaaactctcacagttgcaacaccttgatctcagccacaatgaactcattggag |
26727624 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017 (Bit Score: 98; Significance: 3e-48; HSPs: 2)
Name: scaffold0017
Description:
Target: scaffold0017; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 21 - 210
Target Start/End: Original strand, 173573 - 173762
Alignment:
| Q |
21 |
gcactcctcaaattcaaagaaggccttcaagatgagtatggcatgttgtccacatggaaggacgacccaaatgaagattgctgcaaatggaagggagttc |
120 |
Q |
| |
|
|||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||| |
|
|
| T |
173573 |
gcactcctcacgttcaaacaaggccttcaagatgattatggcatgttgtccacatggaagggcggtcaaaatgaagattgctgcaaatggaagggagttc |
173672 |
T |
 |
| Q |
121 |
gatgcaacaatcaaacaggttatgttcaaagacttgatctgcatggttcatttacatgccatttgagtggtgaaattagtccttcaataa |
210 |
Q |
| |
|
|||||||| |||| |||||||||||||| |||||||||||||| || ||| | ||||||||||||||||| | ||||||||||| |
|
|
| T |
173673 |
aatgcaacatcgaaactggttatgttcaaagtcttgatctgcatggctcggaaacacgtcatttgagtggtgaaatcaatccttcaataa |
173762 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0017; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 11 - 210
Target Start/End: Original strand, 168554 - 168753
Alignment:
| Q |
11 |
ggagagaaatgcactcctcaaattcaaagaaggccttcaagatgagtatggcatgttgtccacatggaaggacgacccaaatgaagattgctgcaaatgg |
110 |
Q |
| |
|
||||||| || ||||| ||| || ||| |||||||||||||||| ||||| |||||||||||||||||||| || ||||||| |||||||||||||||| |
|
|
| T |
168554 |
ggagagacattcactcgtcactttgaaacaaggccttcaagatgactatggtatgttgtccacatggaaggaggatccaaatgcagattgctgcaaatgg |
168653 |
T |
 |
| Q |
111 |
aagggagttcgatgcaacaatcaaacaggttatgttcaaagacttgatctgcatggttcatttacatgccatttgagtggtgaaattagtccttcaataa |
210 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||||||| ||| ||||||||||||||||| ||| | ||||||||||||||| | ||||||||||| |
|
|
| T |
168654 |
aagggagttcaatgcaacaatcaaaccggttatgttgaaaagcttgatctgcatggttcggaaacacgttgtttgagtggtgaaatcaatccttcaataa |
168753 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0061 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0061
Description:
Target: scaffold0061; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 11 - 210
Target Start/End: Complemental strand, 30238 - 30039
Alignment:
| Q |
11 |
ggagagaaatgcactcctcaaattcaaagaaggccttcaagatgagtatggcatgttgtccacatggaaggacgacccaaatgaagattgctgcaaatgg |
110 |
Q |
| |
|
||||||| || ||||| ||| || ||| |||||||||||||||| ||||| |||||||||||||||||||| || ||||||| |||||||||||||||| |
|
|
| T |
30238 |
ggagagacattcactcgtcactttgaaacaaggccttcaagatgactatggtatgttgtccacatggaaggaggatccaaatgcagattgctgcaaatgg |
30139 |
T |
 |
| Q |
111 |
aagggagttcgatgcaacaatcaaacaggttatgttcaaagacttgatctgcatggttcatttacatgccatttgagtggtgaaattagtccttcaataa |
210 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||||||| ||| ||||||||||||||||| ||| | ||||||||||||||| | ||||||||||| |
|
|
| T |
30138 |
aagggagttcaatgcaacaatcaaaccggttatgttgaaaagcttgatctgcatggttcggaaacacgttgtttgagtggtgaaatcaatccttcaataa |
30039 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 6)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 44611447 - 44611610
Alignment:
| Q |
3 |
aaagagaaggagagaaatgcactcctcaaattcaaagaaggccttcaagatgagtatggcatgttgtccacatggaaggacgacccaaatgaagattgct |
102 |
Q |
| |
|
||||||| ||||||| ||||||||||| || ||| ||| |||||||||||||||||| |||||||||||||||||||| | || ||| |||||||| |
|
|
| T |
44611447 |
aaagagagggagagacgtgcactcctcacgtttaaacaagaccttcaagatgagtatggtatgttgtccacatggaaggagggttcagatgcagattgct |
44611546 |
T |
 |
| Q |
103 |
gcaaatggaagggagttcgatgcaacaatcaaacaggttatgttcaaagacttgatctgcatgg |
166 |
Q |
| |
|
|||||||||||||||||| |||||||| |||||| |||||||||||||| |||||||||||||| |
|
|
| T |
44611547 |
gcaaatggaagggagttcaatgcaacattcaaactggttatgttcaaagtcttgatctgcatgg |
44611610 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 3 - 170
Target Start/End: Original strand, 35898739 - 35898906
Alignment:
| Q |
3 |
aaagagaaggagagaaatgcactcctcaaattcaaagaaggccttcaagatgagtatggcatgttgtccacatggaaggacgacccaaatgaagattgct |
102 |
Q |
| |
|
||||||| ||||||| |||| |||||| |||||| ||||||||||||| ||||| || |||||||| |||||||| || ||||||| |||||||| |
|
|
| T |
35898739 |
aaagagagggagagacatgctctcctcggtttcaaacaaggccttcaagacgagtacggtatgttgtctacatggaatgatagtccaaatgcagattgct |
35898838 |
T |
 |
| Q |
103 |
gcaaatggaagggagttcgatgcaacaatcaaacaggttatgttcaaagacttgatctgcatggttca |
170 |
Q |
| |
|
|||||||||| ||||||| ||||||||| ||||| |||||| ||||||| |||||| ||||||||||| |
|
|
| T |
35898839 |
gcaaatggaaaggagttcaatgcaacaaccaaactggttatattcaaagtcttgatttgcatggttca |
35898906 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 5 - 169
Target Start/End: Complemental strand, 11545135 - 11544971
Alignment:
| Q |
5 |
agagaaggagagaaatgcactcctcaaattcaaagaaggccttcaagatgagtatggcatgttgtccacatggaaggacgacccaaatgaagattgctgc |
104 |
Q |
| |
|
||||| ||||||| |||||||||||| ||||||| || |||| ||||| |||||| ||||||||| |||||||| || | | ||| |||||| || |
|
|
| T |
11545135 |
agagagggagagacatgcactcctcacattcaaacaaaaccttgaagataagtatgacatgttgtcgacatggaacaacaatcaaaacccagattgttgt |
11545036 |
T |
 |
| Q |
105 |
aaatggaagggagttcgatgcaacaatcaaacaggttatgttcaaagacttgatctgcatggttc |
169 |
Q |
| |
|
|||||||| |||||||| |||||||| |||||||||||||||||||| || ||| |||||||||| |
|
|
| T |
11545035 |
aaatggaaaggagttcgttgcaacaaccaaacaggttatgttcaaagtctcgatttgcatggttc |
11544971 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 136
Target Start/End: Complemental strand, 44786129 - 44786005
Alignment:
| Q |
12 |
gagagaaatgcactcctcaaattcaaagaaggccttcaagatgagtatggcatgttgtccacatggaaggacgacccaaatgaagattgctgcaaatgga |
111 |
Q |
| |
|
|||||| | |||||||||| ||||||| ||||| |||||||||| ||||||||||||||||||| ||| |||| ||||||| |||||| ||||||||| |
|
|
| T |
44786129 |
gagagacaagcactcctcacattcaaacaaggcattcaagatgattatggcatgttgtccacatcgaaagacggtccaaatgcagattgttgcaaatggg |
44786030 |
T |
 |
| Q |
112 |
agggagttcgatgcaacaatcaaac |
136 |
Q |
| |
|
| ||||||| ||||||||| ||||| |
|
|
| T |
44786029 |
aaggagttcaatgcaacaaccaaac |
44786005 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 44144605 - 44144707
Alignment:
| Q |
3 |
aaagagaaggagagaaatgcactcctcaaattcaaagaaggccttcaagatgagtatggcatgttgtccacatggaaggacgacccaaatgaagattgct |
102 |
Q |
| |
|
||||||| ||||||| | |||||||||| |||||| |||| |||||||||| |||||| || | || ||||||||||| || || ||||||||||||| |
|
|
| T |
44144605 |
aaagagagggagagacacgcactcctcactttcaaacaaggtgttcaagatgactatggcgtgctttcaacatggaaggatgatcctaatgaagattgct |
44144704 |
T |
 |
| Q |
103 |
gca |
105 |
Q |
| |
|
||| |
|
|
| T |
44144705 |
gca |
44144707 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 44612099 - 44612156
Alignment:
| Q |
216 |
cttggaaatctctcacaattgcaacaccttgatctcggtggaaatgaactcattggag |
273 |
Q |
| |
|
||||| |||||||||||||||| |||||||||||| ||| |||||||||| ||||| |
|
|
| T |
44612099 |
cttgggaatctctcacaattgcgacaccttgatctaagtgacaatgaactcactggag |
44612156 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 29228971 - 29228813
Alignment:
| Q |
3 |
aaagagaaggagagaaatgcactcctcaaattcaaagaaggccttcaagatgagtatggcatgttgtccacatggaaggacgacccaaatgaagattgct |
102 |
Q |
| |
|
||||||| ||||||| | ||||| |||| |||||| |||||||| |||||||| ||| |||||||| ||||||||| |||| |||| || |||||| | |
|
|
| T |
29228971 |
aaagagagggagagacaagcactgctcaggttcaaacaaggccttaaagatgagaatgtcatgttgttcacatggaaagacggtccaactgcagattgtt |
29228872 |
T |
 |
| Q |
103 |
gcaaatggaagggagttcgatgcaacaatcaaacaggttatgttcaaagacttgatctgcatggttc |
169 |
Q |
| |
|
|||||||| | ||||||||| ||||| |||||||||||||| |||||||||||| |||| |
|
|
| T |
29228871 |
gcaaatgggaa--------atgcaacaaccaaactggttatgttcaaagtcttgatctgcatcgttc |
29228813 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 29342270 - 29342112
Alignment:
| Q |
3 |
aaagagaaggagagaaatgcactcctcaaattcaaagaaggccttcaagatgagtatggcatgttgtccacatggaaggacgacccaaatgaagattgct |
102 |
Q |
| |
|
||||||| ||||||| | ||||| |||| |||||| |||||||| |||||||| ||| |||||||| ||||||||| |||| |||| || |||||| | |
|
|
| T |
29342270 |
aaagagagggagagacaagcactgctcaggttcaaacaaggccttaaagatgagaatgtcatgttgttcacatggaaagacggtccaactgcagattgtt |
29342171 |
T |
 |
| Q |
103 |
gcaaatggaagggagttcgatgcaacaatcaaacaggttatgttcaaagacttgatctgcatggttc |
169 |
Q |
| |
|
|||||||| | ||||||||| ||||| |||||||||||||| |||||||||||| |||| |
|
|
| T |
29342170 |
gcaaatgggaa--------atgcaacaaccaaactggttatgttcaaagtcttgatctgcatcgttc |
29342112 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 277
Target Start/End: Complemental strand, 29228631 - 29228570
Alignment:
| Q |
216 |
cttggaaatctctcacaattgcaacaccttgatctcggtggaaatgaactcattggagcaat |
277 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |
|
|
| T |
29228631 |
cttggaaatctctcacaattgcaacaccttgatcttagcaacaatgaactcattggagcaat |
29228570 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 277
Target Start/End: Complemental strand, 29341930 - 29341869
Alignment:
| Q |
216 |
cttggaaatctctcacaattgcaacaccttgatctcggtggaaatgaactcattggagcaat |
277 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |
|
|
| T |
29341930 |
cttggaaatctctcacaattgcaacaccttgatcttagcaacaatgaactcattggagcaat |
29341869 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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