View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3492_high_37 (Length: 253)
Name: NF3492_high_37
Description: NF3492
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3492_high_37 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 181; Significance: 7e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 13 - 253
Target Start/End: Complemental strand, 3187066 - 3186826
Alignment:
| Q |
13 |
aatatattttaaaaaattatgagaatcacttaagcacaagatgtgcttaaagtggattcaataaagtcacaagtcacatgtctataaagttaaggtgtac |
112 |
Q |
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| T |
3187066 |
aatatatattaaaaaattatgagaaccactcaagcataagatgtgcttcatgtggattcaacgaagtcacaagtcacatgtctataaagttaaggtgtac |
3186967 |
T |
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| Q |
113 |
ctcaagttgactcaataaagtcatatctcaaagcaaggctaagttgttagccttactttgactctagtttgttttcggttgacaacttaaaatattttta |
212 |
Q |
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||||||||||||||||||| ||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
3186966 |
ctcaagttgactcaataaaatcacatctcaaagtaagactaagttgttagccttactttgactctagtttgttttcggttgacaacttaaaatgttttta |
3186867 |
T |
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| Q |
213 |
aataacacaatctctaaaatatcgttataaatatctatatt |
253 |
Q |
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||||||||||||| |||||||| |||||||||||||||||| |
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| T |
3186866 |
aataacacaatctttaaaatattgttataaatatctatatt |
3186826 |
T |
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